F179438

General Info

Members Datasets Scaffolds Average Seq Length
140 101 280 306

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10006029|Ga0105243_1000602910
Length 343
Sequence VEKINMLNKVQNSIFRMISQALSPEFINISSNLDENVKLLNATIQASYRQVQSLDRDVEVLKLLMGKTLANQVKQHGVYDNIQDAEFSVFSQFGDDGIIQYLVHQIKPKNQTFIEFGTQNYRESNTRFLLMNNNWKGLIIEGDPSCIEFVKQEQIYWKYDLTAVNHFIDKDNINQIFLENGFSGEIGLLSIDIDGNDYWIWECINTVNPVIVVAEYNSVFGADYAVTVPYDPEFYRTNAHHSNLYWGCSLKALYLLAERKGYVFVGTNSNGNNAHFVRKDKIGDLPAMSIQIGYTDSKFRESRDEQGNLTYLAGGDRLRMLKDMKVYNLESGSLETIENLFEL

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
54 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
55 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
56 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
57 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
58 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
76 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
79 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
90 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
91 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
92 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
93 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
94 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
95 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
96 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
97 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
98 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
99 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
100 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
101 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.14
Metatranscriptomes 0
Isolates 2.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 35
Nodule 0
Rhizoplane 0
Rhizosphere 56.43
Stem 0
Stem Tuber 0
Unclassified 8.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10006029 3300009148 Bacteria 9381
2 JGI24739J22299_10000891 3300001989 Bacteria 11042
3 JGI25154J39366_1000080 3300002738 Bacteria 89374
4 JGI25157J39369_1005386 3300002741 Bacteria 2098
5 JGI25159J45721_1009013 3300002987 Unclassified 2676
6 JGI25153J46596_10014465 3300003215 Bacteria 3278
7 JGI25153J46596_10019681 3300003215 Unclassified 2576
8 rootH1_10154433 3300003316 Bacteria 3439
9 rootH1_10171802 3300003316 Bacteria 1847
10 rootH2_10283410 3300003320 Unclassified 1588
11 JGI25160J50197_1000798 3300003354 Bacteria 16971
12 JGI25160J50197_1005465 3300003354 Bacteria 5284
13 JGI25160J50197_1009160 3300003354 Unclassified 3699
14 Ga0055526_1004984 3300003771 Bacteria 7790
15 Ga0055526_1009868 3300003771 Bacteria 4529
16 Ga0055528_1000072 3300003790 Bacteria 77661
17 Ga0055530_10001331 3300003791 Bacteria 18499
18 Ga0055531_10014141 3300003794 Bacteria 3618
19 Ga0065165_1000038 3300005262 Bacteria 211664
20 Ga0065165_1000295 3300005262 Bacteria 84323
21 Ga0065165_1011313 3300005262 Bacteria 3742
22 Ga0065715_10146841 3300005293 Bacteria 1778
23 Ga0065707_10083533 3300005295 Bacteria 8842
24 Ga0070661_100002180 3300005344 Bacteria 13483
25 Ga0070671_100112021 3300005355 Bacteria 2292
26 Ga0070659_100000260 3300005366 Bacteria 41588
27 Ga0070705_100022092 3300005440 Bacteria 3395
28 Ga0070705_100077051 3300005440 Unclassified 2035
29 Ga0070705_100373204 3300005440 Bacteria 1047
30 Ga0070700_100014137 3300005441 Bacteria 4504
31 Ga0070708_100007413 3300005445 Bacteria 8778
32 Ga0070708_100163928 3300005445 Bacteria 2072
33 Ga0068867_100007797 3300005459 Bacteria 7572
34 Ga0070706_100000302 3300005467 Bacteria 59595
35 Ga0070706_100009452 3300005467 Bacteria 9071
36 Ga0070707_100000779 3300005468 Bacteria 31504
37 Ga0070707_100037567 3300005468 Bacteria 4623
38 Ga0070698_100000753 3300005471 Bacteria 34981
39 Ga0070698_100012677 3300005471 Bacteria 8924
40 Ga0070698_100189848 3300005471 Bacteria 1992
41 Ga0070699_100190214 3300005518 Unclassified 1823
42 Ga0070679_100433588 3300005530 Unclassified 1259
43 Ga0070697_100014852 3300005536 Bacteria 6111
44 Ga0070697_100041781 3300005536 Bacteria 3712
45 Ga0070665_100006752 3300005548 Bacteria 11664
46 Ga0070704_100001618 3300005549 Bacteria 12199
47 Ga0068855_100254431 3300005563 Unclassified 1958
48 Ga0068854_100009568 3300005578 Bacteria 6256
49 Ga0068859_100197836 3300005617 Bacteria 2094
50 Ga0068861_100101667 3300005719 Bacteria 2287
51 Ga0070717_10074074 3300006028 Bacteria 2846
52 Ga0075367_10100887 3300006178 Bacteria 1764
53 Ga0075369_10034666 3300006186 Bacteria 2143
54 Ga0075366_10006798 3300006195 Bacteria 6287
55 Ga0075366_10010759 3300006195 Bacteria 5143
56 Ga0075370_10001286 3300006353 Bacteria 10717
57 Ga0075370_10001589 3300006353 Bacteria 9999
58 Ga0075430_100034310 3300006846 Bacteria 4306
59 Ga0075434_100175592 3300006871 Bacteria 2162
60 Ga0075429_100000282 3300006880 Bacteria 35849
61 Ga0075436_100165782 3300006914 Unclassified 1559
62 Ga0097620_100197840 3300006931 Bacteria 2094
63 Ga0105240_10586061 3300009093 Bacteria 1230
64 Ga0105245_10663361 3300009098 Bacteria 1074
65 Ga0105243_10187732 3300009148 Bacteria 1803
66 Ga0105237_10050154 3300009545 Bacteria 4195
67 Ga0105237_10314991 3300009545 Bacteria 1568
68 Ga0105249_10068339 3300009553 Bacteria 3276
69 Ga0105239_10025381 3300010375 Bacteria 6524
70 Ga0105239_10042239 3300010375 Bacteria 4996
71 Ga0105239_10124846 3300010375 Bacteria 2860
72 Ga0157371_10081585 3300013102 Bacteria 2290
73 Ga0157374_10110165 3300013296 Bacteria 2648
74 Ga0213871_10000204 3300021441 Bacteria 6872
75 Ga0209436_100344 3300025208 Bacteria 21034
76 Ga0209646_1000091 3300025246 Bacteria 188727
77 Ga0209026_1001535 3300025250 Bacteria 10059
78 Ga0209129_1016655 3300025258 Bacteria 1467
79 Ga0209673_1000130 3300025273 Bacteria 163870
80 Ga0209130_1001395 3300025284 Bacteria 16196
81 Ga0209564_1001031 3300025295 Bacteria 34240
82 Ga0209564_1001446 3300025295 Bacteria 24259
83 Ga0209758_1002050 3300025297 Bacteria 21606
84 Ga0209758_1006573 3300025297 Bacteria 8264
85 Ga0209050_1000530 3300025298 Bacteria 63406
86 Ga0207426_1000024 3300025302 Bacteria 534075
87 Ga0207426_1000251 3300025302 Bacteria 117462
88 Ga0207426_1000452 3300025302 Bacteria 65182
89 Ga0207426_1000546 3300025302 Bacteria 52783
90 Ga0207426_1006593 3300025302 Bacteria 5007
91 Ga0207426_1011855 3300025302 Unclassified 3299
92 Ga0209257_1000001 3300025304 Bacteria 2274655
93 Ga0209257_1001901 3300025304 Bacteria 22582
94 Ga0207684_10000042 3300025910 Bacteria 262010
95 Ga0207684_10009658 3300025910 Bacteria 8509
96 Ga0207671_10048139 3300025914 Bacteria 3155
97 Ga0207646_10001377 3300025922 Bacteria 30158
98 Ga0207646_10058963 3300025922 Bacteria 3428
99 Ga0207690_10002105 3300025932 Bacteria 12189
100 Ga0207709_10187853 3300025935 Bacteria 1465
101 Ga0207679_10000047 3300025945 Bacteria 119891
102 Ga0207708_10095986 3300026075 Bacteria 2290
103 Ga0207648_10012522 3300026089 Bacteria 7939
104 Ga0207648_10118900 3300026089 Bacteria 2323
105 Ga0207675_100039873 3300026118 Bacteria 4382
106 Ga0209968_1001253 3300027526 Bacteria 3887
107 Ga0316177_1026578 3300030731 Bacteria 3016
108 Ga0316180_1103906 3300030736 Bacteria 1701
109 Ga0265327_10005673 3300031251 Bacteria 10328
110 Ga0307509_10022157 3300031507 Bacteria 7170
111 Ga0307510_10002707 3300033180 Bacteria 20249
112 Ga0373925_0113581 3300037068 Bacteria 2095
113 Ga0436360_0963230 3300039438 Bacteria 8587
114 Ga0436361_0699950 3300039447 Bacteria 3848
115 Ga0453683_0024904 3300044673 Bacteria 3803
116 Ga0453684_0143011 3300044712 Bacteria 2853
117 Ga0453684_0191293 3300044712 Bacteria 2394
118 Ga0451576_0045629 3300045051 Bacteria 4614
119 Ga0451576_0091611 3300045051 Bacteria 3162
120 Ga0451576_0206475 3300045051 Bacteria 2051
121 Ga0501034_0118290 3300049571 Unclassified 2637
122 Ga0501044_0055251 3300049823 Bacteria 4079
123 nmdc:mga0k408_1024_c1 3300050493 Bacteria 10916
124 nmdc:mga0k408_126075_c1 3300050493 Bacteria 1519
125 nmdc:mga07m45_10569_c1 3300050496 Bacteria 4826
126 nmdc:mga07m45_1234_c1 3300050496 Bacteria 11582
127 nmdc:mga07m45_6582_c2 3300050496 Bacteria 2571
128 nmdc:mga07m45_9350_c1 3300050496 Bacteria 5082
129 nmdc:mga06r32_285217_c1 3300050510 Bacteria 1638
130 nmdc:mga08x19_236047_c1 3300050514 Unclassified 1259
131 Ga0500644_0000021 3300053088 Bacteria 100777
132 Ga0500658_0003322 3300053134 Bacteria 6101
133 Ga0500577_0001492 3300053142 Bacteria 5968
134 Ga0500633_0000283 3300053160 Bacteria 7440
135 Ga0500634_0045428 3300053161 Bacteria 2377
136 Ga0500636_0072608 3300053177 Bacteria 1994
137 2821139948 2821136567 Bacteria 8080116
138 2904472066 2904467357 Bacteria 8057758
139 2911143843 2911138879 Bacteria 5811561
140 8003151856 8003151029 Bacteria 8187759
141 Ga0105243_10006029
142 JGI24739J22299_10000891
143 JGI25154J39366_1000080
144 JGI25157J39369_1005386
145 JGI25159J45721_1009013
146 JGI25153J46596_10014465
147 JGI25153J46596_10019681
148 rootH1_10154433
149 rootH1_10171802
150 rootH2_10283410
151 JGI25160J50197_1000798
152 JGI25160J50197_1005465
153 JGI25160J50197_1009160
154 Ga0055526_1004984
155 Ga0055526_1009868
156 Ga0055528_1000072
157 Ga0055530_10001331
158 Ga0055531_10014141
159 Ga0065165_1000038
160 Ga0065165_1000295
161 Ga0065165_1011313
162 Ga0065715_10146841
163 Ga0065707_10083533
164 Ga0070661_100002180
165 Ga0070671_100112021
166 Ga0070659_100000260
167 Ga0070705_100022092
168 Ga0070705_100077051
169 Ga0070705_100373204
170 Ga0070700_100014137
171 Ga0070708_100007413
172 Ga0070708_100163928
173 Ga0068867_100007797
174 Ga0070706_100000302
175 Ga0070706_100009452
176 Ga0070707_100000779
177 Ga0070707_100037567
178 Ga0070698_100000753
179 Ga0070698_100012677
180 Ga0070698_100189848
181 Ga0070699_100190214
182 Ga0070679_100433588
183 Ga0070697_100014852
184 Ga0070697_100041781
185 Ga0070665_100006752
186 Ga0070704_100001618
187 Ga0068855_100254431
188 Ga0068854_100009568
189 Ga0068859_100197836
190 Ga0068861_100101667
191 Ga0070717_10074074
192 Ga0075367_10100887
193 Ga0075369_10034666
194 Ga0075366_10006798
195 Ga0075366_10010759
196 Ga0075370_10001286
197 Ga0075370_10001589
198 Ga0075430_100034310
199 Ga0075434_100175592
200 Ga0075429_100000282
201 Ga0075436_100165782
202 Ga0097620_100197840
203 Ga0105240_10586061
204 Ga0105245_10663361
205 Ga0105243_10187732
206 Ga0105237_10050154
207 Ga0105237_10314991
208 Ga0105249_10068339
209 Ga0105239_10025381
210 Ga0105239_10042239
211 Ga0105239_10124846
212 Ga0157371_10081585
213 Ga0157374_10110165
214 Ga0213871_10000204
215 Ga0209436_100344
216 Ga0209646_1000091
217 Ga0209026_1001535
218 Ga0209129_1016655
219 Ga0209673_1000130
220 Ga0209130_1001395
221 Ga0209564_1001031
222 Ga0209564_1001446
223 Ga0209758_1002050
224 Ga0209758_1006573
225 Ga0209050_1000530
226 Ga0207426_1000024
227 Ga0207426_1000251
228 Ga0207426_1000452
229 Ga0207426_1000546
230 Ga0207426_1006593
231 Ga0207426_1011855
232 Ga0209257_1000001
233 Ga0209257_1001901
234 Ga0207684_10000042
235 Ga0207684_10009658
236 Ga0207671_10048139
237 Ga0207646_10001377
238 Ga0207646_10058963
239 Ga0207690_10002105
240 Ga0207709_10187853
241 Ga0207679_10000047
242 Ga0207708_10095986
243 Ga0207648_10012522
244 Ga0207648_10118900
245 Ga0207675_100039873
246 Ga0209968_1001253
247 Ga0316177_1026578
248 Ga0316180_1103906
249 Ga0265327_10005673
250 Ga0307509_10022157
251 Ga0307510_10002707
252 Ga0373925_0113581
253 Ga0436360_0963230
254 Ga0436361_0699950
255 Ga0453683_0024904
256 Ga0453684_0143011
257 Ga0453684_0191293
258 Ga0451576_0045629
259 Ga0451576_0091611
260 Ga0451576_0206475
261 Ga0501034_0118290
262 Ga0501044_0055251
263 nmdc:mga0k408_1024_c1
264 nmdc:mga0k408_126075_c1
265 nmdc:mga07m45_10569_c1
266 nmdc:mga07m45_1234_c1
267 nmdc:mga07m45_6582_c2
268 nmdc:mga07m45_9350_c1
269 nmdc:mga06r32_285217_c1
270 nmdc:mga08x19_236047_c1
271 Ga0500644_0000021
272 Ga0500658_0003322
273 Ga0500577_0001492
274 Ga0500633_0000283
275 Ga0500634_0045428
276 Ga0500636_0072608
277 2821139948
278 2904472066
279 2911143843
280 8003151856

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fn4-assembly1.cif.gz_D short-chain nad(h)-dependent dehydrogenase/reductase from sulfolobus acidocaldarius 0.7572 92 174
7pcs-assembly1.cif.gz_C structure of the heterotetrameric sdr family member bbscd 0.7529 96 176
5tt0-assembly1.cif.gz_B crystal structure of an oxidoreductase (short chain dehydrogenase/reductase family) from burkholderia thailandensis 0.7465 96 174
3qiv-assembly1.cif.gz_A crystal structure of a putative short-chain dehydrogenase or 3-oxoacyl-[acyl-carrier-protein] reductase from mycobacterium paratuberculosis atcc baa-968 / k-10 0.7343 94 174
7pnv-assembly1.cif.gz_b assembly intermediate of mouse mitochondrial ribosome small subunit without ms37 in complex with rbfa and mettl15 0.7299 86 177
ID Description Score Start End Superfamily
af_A2AUU0_170_280_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7793 96 150 3.40.50.150
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.7633 96 179 3.40.50.720
4fn4D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.7572 92 174 3.40.50.720
af_A0A5K1K930_343_529_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7551 79 204 3.40.50.150
5tt0B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.7465 96 174 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V6JTR3-F1-model_v4 Uncharacterized protein 0.9948 162 321
AF-A0A2R5HAY7-F1-model_v4 deleted 0.9875 67 320
AF-A0A7G1IJ91-F1-model_v4 Methyltransferase FkbM domain-containing protein 0.981 152 320
AF-A0A1F6PK32-F1-model_v4 NADH dehydrogenase 0.9769 92 320
AF-A0A180FUA6-F1-model_v4 Methyltransferase FkbM domain-containing protein 0.9736 67 320

Map