F178764

General Info

Members Datasets Scaffolds Average Seq Length
140 97 138 308

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100001856|Ga0070708_1000018565
Length 336
Sequence MKLPKGPPSAEVTPESLYLRRREFIKNAALFAGTTTALGGALLYLASGGRADSPEAPREEGGVGGASPPDAGSAELAHTRGPFGTDEPMTPFKDVTTYNNFYEFGVDKSDPAENAHVLRPRPWTITFSGEISKPQTVDIDTLIKWFPLEERVYRMRCVEAWSMVIPWLGFPLGELIKRLEPTSRAKYVAFTTLLDPAQMPGQRRRILDWPYVEGLRIDEAVNPLALLAVGLYGKVLPNQNGAPIRLVTPWKYGFKGIKSIVKIELTEKQPPTTWSLAGPSEYGFYANVNPEVDHPRWSQATERRIGEVRRRKTLPFNGYAEQVASLYAGMDLRKNF

Samples

Sample ID Description Type Environment
1 2547132512 Azospira oryzae 6a3 Isolate Unclassified
2 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
15 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
16 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
36 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
37 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
38 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
42 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
43 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
44 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
48 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
49 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
50 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
51 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
52 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
53 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
54 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
60 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
67 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
68 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
74 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
77 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
81 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
82 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
83 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
97 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.57
Metatranscriptomes 0
Isolates 1.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.43
Nodule 0
Rhizoplane 0.71
Rhizosphere 93.57
Stem 0
Stem Tuber 0
Unclassified 4.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10099905 3300005290 Bacteria 2077
2 Ga0070713_100027626 3300005436 Bacteria 4469
3 Ga0070708_100001856 3300005445 Bacteria 16207
4 Ga0070708_100024249 3300005445 Bacteria 5172
5 Ga0070681_10008194 3300005458 Bacteria 10225
6 Ga0070706_100035798 3300005467 Bacteria 4584
7 Ga0070706_100065324 3300005467 Bacteria 3365
8 Ga0070706_100272351 3300005467 Bacteria 1580
9 Ga0070707_100026586 3300005468 Bacteria 5497
10 Ga0070707_100033015 3300005468 Bacteria 4933
11 Ga0070707_100075486 3300005468 Bacteria 3251
12 Ga0070707_100196220 3300005468 Bacteria 1968
13 Ga0070699_100000195 3300005518 Bacteria 59336
14 Ga0070695_100037455 3300005545 Bacteria 3057
15 Ga0070696_100010426 3300005546 Bacteria 6227
16 Ga0070704_100129776 3300005549 Bacteria 1951
17 Ga0068863_100121614 3300005841 Bacteria 2490
18 Ga0075362_10112392 3300006177 Bacteria 1283
19 Ga0075367_10019911 3300006178 Bacteria 3728
20 Ga0068871_100083277 3300006358 Bacteria 2653
21 Ga0075428_100000649 3300006844 Bacteria 35792
22 Ga0075428_100021522 3300006844 Bacteria 7137
23 Ga0075430_100001030 3300006846 Bacteria 22023
24 Ga0075430_100002386 3300006846 Bacteria 15615
25 Ga0075431_100000744 3300006847 Bacteria 28129
26 Ga0075431_100004820 3300006847 Bacteria 13286
27 Ga0075431_100019066 3300006847 Bacteria 6989
28 Ga0075431_100189299 3300006847 Bacteria 2109
29 Ga0075433_10091397 3300006852 Bacteria 2691
30 Ga0075433_10108931 3300006852 Bacteria 2457
31 Ga0075434_100188280 3300006871 Bacteria 2084
32 Ga0075434_100193048 3300006871 Bacteria 2057
33 Ga0075434_100214723 3300006871 Bacteria 1944
34 Ga0075429_100001512 3300006880 Bacteria 19147
35 Ga0075429_100010464 3300006880 Bacteria 8026
36 Ga0075435_100016158 3300007076 Bacteria 5624
37 Ga0099794_10138603 3300007265 Bacteria 1231
38 Ga0111539_10037707 3300009094 Bacteria 5835
39 Ga0114129_10003266 3300009147 Bacteria 22758
40 Ga0114129_10004441 3300009147 Bacteria 19790
41 Ga0114129_10034528 3300009147 Bacteria 7144
42 Ga0114129_10083121 3300009147 Bacteria 4449
43 Ga0114129_10098931 3300009147 Bacteria 4037
44 Ga0163162_10316206 3300013306 Bacteria 1694
45 Ga0163163_10003138 3300014325 Bacteria 14006
46 Ga0213876_10002931 3300021384 Bacteria 9891
47 Ga0207684_10127445 3300025910 Bacteria 2185
48 Ga0207684_10136066 3300025910 Bacteria 2110
49 Ga0207646_10048499 3300025922 Bacteria 3807
50 Ga0207712_10071514 3300025961 Bacteria 2495
51 Ga0207676_10260839 3300026095 Bacteria 1565
52 Ga0207428_10045010 3300027907 Bacteria 3558
53 Ga0265324_10009796 3300029957 Bacteria 3722
54 Ga0265332_10000039 3300031238 Bacteria 128373
55 Ga0265332_10020408 3300031238 Bacteria 2925
56 Ga0265320_10007913 3300031240 Bacteria 6560
57 Ga0265331_10000088 3300031250 Bacteria 125176
58 Ga0265327_10000884 3300031251 Bacteria 44290
59 Ga0307513_10240901 3300031456 Bacteria 1613
60 Ga0307509_10000018 3300031507 Bacteria 258998
61 Ga0265314_10016032 3300031711 Bacteria 5933
62 Ga0307405_10040341 3300031731 Bacteria 2827
63 Ga0307413_10218992 3300031824 Bacteria 1389
64 Ga0307410_10190844 3300031852 Bacteria 1558
65 Ga0307416_100007508 3300032002 Bacteria 6942
66 Ga0307416_100440240 3300032002 Bacteria 1353
67 Ga0307411_10146354 3300032005 Bacteria 1749
68 Ga0307411_10280141 3300032005 Bacteria 1327
69 Ga0373945_0065720 3300035116 Bacteria 1363
70 Ga0373953_0029123 3300035117 Bacteria 2134
71 Ga0373943_0049635 3300035170 Bacteria 2060
72 Ga0373955_0245034 3300035172 Bacteria 1074
73 Ga0316574_0158196 3300035398 Bacteria 1460
74 Ga0373924_0039847 3300035410 Bacteria 1921
75 Ga0373927_0136432 3300035695 Bacteria 1604
76 Ga0373947_0153612 3300035725 Bacteria 1484
77 Ga0373937_0048924 3300036401 Bacteria 3871
78 Ga0373937_0100105 3300036401 Bacteria 2689
79 Ga0373937_0151928 3300036401 Bacteria 2169
80 Ga0436365_0970358 3300039437 Bacteria 2737
81 Ga0436365_1164113 3300039437 Bacteria 15972
82 Ga0451577_0001761 3300042876 Bacteria 27868
83 Ga0451577_0096748 3300042876 Bacteria 2636
84 Ga0466969_0007116 3300044656 Bacteria 5955
85 Ga0453683_0000632 3300044673 Bacteria 38223
86 Ga0466966_0068373 3300044684 Bacteria 2230
87 Ga0453684_0001581 3300044712 Bacteria 62948
88 Ga0453684_0046404 3300044712 Bacteria 5778
89 Ga0453684_0086806 3300044712 Bacteria 3881
90 Ga0453684_0199428 3300044712 Bacteria 2334
91 Ga0453684_0243707 3300044712 Bacteria 2068
92 Ga0466959_0032329 3300045049 Bacteria 3873
93 Ga0451576_0093353 3300045051 Bacteria 3129
94 Ga0451576_0220720 3300045051 Bacteria 1979
95 Ga0495592_0010040 3300046454 Bacteria 7131
96 Ga0495603_0020130 3300046455 Bacteria 4044
97 Ga0495638_0006434 3300046460 Bacteria 8547
98 Ga0495653_0238652 3300046463 Bacteria 1213
99 Ga0495580_0162214 3300046472 Bacteria 1547
100 Ga0495582_0153335 3300046473 Bacteria 1308
101 Ga0495664_0042574 3300046477 Bacteria 2690
102 Ga0495594_0070850 3300046499 Bacteria 1938
103 Ga0495608_0004894 3300046511 Bacteria 9587
104 Ga0495618_0018819 3300046514 Bacteria 4243
105 Ga0495630_0005144 3300046517 Bacteria 9211
106 Ga0495630_0273089 3300046517 Bacteria 1292
107 Ga0495640_0030555 3300046533 Bacteria 3856
108 Ga0495622_0072261 3300046557 Bacteria 1592
109 Ga0495667_0000850 3300046559 Bacteria 19750
110 Ga0495667_0107523 3300046559 Bacteria 1803
111 Ga0495634_0002318 3300046642 Bacteria 15933
112 Ga0495659_0034249 3300046664 Bacteria 1785
113 Ga0495588_0017733 3300046674 Bacteria 3462
114 Ga0495657_0002449 3300046675 Bacteria 15621
115 Ga0495599_0018908 3300046678 Bacteria 4295
116 Ga0495674_0024623 3300047319 Bacteria 5526
117 Ga0496114_0043520 3300048917 Bacteria 3723
118 Ga0501032_0179666 3300049569 Bacteria 1386
119 Ga0501068_0169577 3300049584 Bacteria 1377
120 Ga0501070_0244472 3300049586 Bacteria 1468
121 nmdc:mga05p37_1016_c1 3300050507 Bacteria 31922
122 nmdc:mga05p37_40974_c1 3300050507 Bacteria 5687
123 nmdc:mga05p37_51951_c1 3300050507 Bacteria 5040
124 nmdc:mga05p37_691_c1 3300050507 Bacteria 37436
125 nmdc:mga09592_11431_c1 3300050508 Bacteria 7219
126 nmdc:mga09592_366_c1 3300050508 Bacteria 32971
127 nmdc:mga0qj67_515_c1 3300050509 Bacteria 26440
128 nmdc:mga0qj67_913_c1 3300050509 Bacteria 20325
129 nmdc:mga06r32_1118_c1 3300050510 Bacteria 24036
130 nmdc:mga06r32_1968_c1 3300050510 Bacteria 18334
131 nmdc:mga06r32_642386_c1 3300050510 Bacteria 1030
132 nmdc:mga08y16_465614_c1 3300050511 Bacteria 1288
133 nmdc:mga08y16_74451_c1 3300050511 Bacteria 3538
134 nmdc:mga0n895_472481_c1 3300050512 Bacteria 1265
135 nmdc:mga0n895_679298_c1 3300050512 Bacteria 1027
136 nmdc:mga0rr50_266195_c1 3300050513 Bacteria 1427
137 nmdc:mga0a205_293261_c1 3300050515 Bacteria 1501
138 Ga0495619_0075967 3300053085 Bacteria 2255

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050510 nmdc:mga06r32_642386_c1 nmdc:mga06r32_642386_c1_18_890 256
2 3300035170 Ga0373943_0049635 Ga0373943_0049635_950_1942 258
3 3300035695 Ga0373927_0136432 Ga0373927_0136432_597_1589 258
4 3300046472 Ga0495580_0162214 Ga0495580_0162214_346_1338 258
5 3300050512 nmdc:mga0n895_679298_c1 nmdc:mga0n895_679298_c1_27_815 260
6 3300049569 Ga0501032_0179666 Ga0501032_0179666_375_1295 262
7 3300031456 Ga0307513_10240901 Ga0307513_102409012 263
8 3300035116 Ga0373945_0065720 Ga0373945_0065720_213_1196 263
9 3300035725 Ga0373947_0153612 Ga0373947_0153612_130_1113 263
10 3300046455 Ga0495603_0020130 Ga0495603_0020130_173_1156 263
11 3300046499 Ga0495594_0070850 Ga0495594_0070850_896_1879 263
12 3300046674 Ga0495588_0017733 Ga0495588_0017733_634_1617 263
13 3300005518 Ga0070699_100000195 Ga0070699_10000019553 264
14 3300005546 Ga0070696_100010426 Ga0070696_1000104262 264
15 3300009147 Ga0114129_10083121 Ga0114129_100831212 264
16 3300042876 Ga0451577_0001761 Ga0451577_0001761_14005_15141 264
17 3300046664 Ga0495659_0034249 Ga0495659_0034249_595_1572 264
18 3300050507 nmdc:mga05p37_51951_c1 nmdc:mga05p37_51951_c1_952_1929 264
19 3300006852 Ga0075433_10108931 Ga0075433_101089312 265
20 3300006871 Ga0075434_100188280 Ga0075434_1001882802 265
21 3300021384 Ga0213876_10002931 Ga0213876_100029314 266
22 3300039437 Ga0436365_0970358 Ga0436365_0970358_120_1106 266
23 3300039437 Ga0436365_1164113 Ga0436365_1164113_11996_12982 266
24 3300005468 Ga0070707_100026586 Ga0070707_1000265866 267
25 3300025922 Ga0207646_10048499 Ga0207646_100484993 267
26 3300031824 Ga0307413_10218992 Ga0307413_102189922 267
27 3300031852 Ga0307410_10190844 Ga0307410_101908442 267
28 3300032005 Ga0307411_10280141 Ga0307411_102801412 267
29 3300005467 Ga0070706_100065324 Ga0070706_1000653244 269
30 3300005468 Ga0070707_100033015 Ga0070707_1000330153 269
31 3300006871 Ga0075434_100193048 Ga0075434_1001930483 269
32 3300009147 Ga0114129_10034528 Ga0114129_100345282 269
33 3300025910 Ga0207684_10136066 Ga0207684_101360662 269
34 3300050507 nmdc:mga05p37_40974_c1 nmdc:mga05p37_40974_c1_2163_3038 269
35 3300050513 nmdc:mga0rr50_266195_c1 nmdc:mga0rr50_266195_c1_152_1027 269
36 3300032002 Ga0307416_100007508 Ga0307416_1000075084 270
37 3300032005 Ga0307411_10146354 Ga0307411_101463543 270
38 3300044712 Ga0453684_0046404 Ga0453684_0046404_796_1671 270
39 iso_pu_bacteria 2998344455 2998345548 270
40 3300005436 Ga0070713_100027626 Ga0070713_1000276263 271
41 3300005445 Ga0070708_100001856 Ga0070708_1000018565 271
42 3300005445 Ga0070708_100024249 Ga0070708_1000242493 271
43 3300005458 Ga0070681_10008194 Ga0070681_100081946 271
44 3300005467 Ga0070706_100035798 Ga0070706_1000357983 271
45 3300005467 Ga0070706_100272351 Ga0070706_1002723512 271
46 3300005468 Ga0070707_100075486 Ga0070707_1000754862 271
47 3300005468 Ga0070707_100196220 Ga0070707_1001962201 271
48 3300005545 Ga0070695_100037455 Ga0070695_1000374553 271
49 3300005549 Ga0070704_100129776 Ga0070704_1001297762 271
50 3300006177 Ga0075362_10112392 Ga0075362_101123921 271
51 3300006178 Ga0075367_10019911 Ga0075367_100199113 271
52 3300006844 Ga0075428_100000649 Ga0075428_10000064917 271
53 3300006844 Ga0075428_100021522 Ga0075428_1000215227 271
54 3300006846 Ga0075430_100001030 Ga0075430_1000010305 271
55 3300006846 Ga0075430_100002386 Ga0075430_10000238614 271
56 3300006847 Ga0075431_100000744 Ga0075431_10000074426 271
57 3300006847 Ga0075431_100004820 Ga0075431_1000048208 271
58 3300006847 Ga0075431_100019066 Ga0075431_1000190667 271
59 3300006847 Ga0075431_100189299 Ga0075431_1001892992 271
60 3300006852 Ga0075433_10091397 Ga0075433_100913973 271
61 3300006871 Ga0075434_100214723 Ga0075434_1002147232 271
62 3300006880 Ga0075429_100001512 Ga0075429_10000151214 271
63 3300006880 Ga0075429_100010464 Ga0075429_1000104648 271
64 3300007076 Ga0075435_100016158 Ga0075435_1000161586 271
65 3300007265 Ga0099794_10138603 Ga0099794_101386032 271
66 3300009094 Ga0111539_10037707 Ga0111539_100377074 271
67 3300009147 Ga0114129_10003266 Ga0114129_100032663 271
68 3300009147 Ga0114129_10004441 Ga0114129_1000444116 271
69 3300009147 Ga0114129_10098931 Ga0114129_100989312 271
70 3300013306 Ga0163162_10316206 Ga0163162_103162062 271
71 3300025910 Ga0207684_10127445 Ga0207684_101274451 271
72 3300025961 Ga0207712_10071514 Ga0207712_100715142 271
73 3300026095 Ga0207676_10260839 Ga0207676_102608393 271
74 3300027907 Ga0207428_10045010 Ga0207428_100450104 271
75 3300029957 Ga0265324_10009796 Ga0265324_100097966 271
76 3300031238 Ga0265332_10000039 Ga0265332_1000003995 271
77 3300031238 Ga0265332_10020408 Ga0265332_100204083 271
78 3300031240 Ga0265320_10007913 Ga0265320_100079136 271
79 3300031250 Ga0265331_10000088 Ga0265331_10000088102 271
80 3300031251 Ga0265327_10000884 Ga0265327_1000088428 271
81 3300031507 Ga0307509_10000018 Ga0307509_1000001853 271
82 3300031711 Ga0265314_10016032 Ga0265314_100160325 271
83 3300031731 Ga0307405_10040341 Ga0307405_100403412 271
84 3300032002 Ga0307416_100440240 Ga0307416_1004402402 271
85 3300035172 Ga0373955_0245034 Ga0373955_0245034_106_1056 271
86 3300035398 Ga0316574_0158196 Ga0316574_0158196_162_1100 271
87 3300036401 Ga0373937_0100105 Ga0373937_0100105_1419_2402 271
88 3300042876 Ga0451577_0096748 Ga0451577_0096748_1020_1958 271
89 3300044656 Ga0466969_0007116 Ga0466969_0007116_4910_5875 271
90 3300044673 Ga0453683_0000632 Ga0453683_0000632_8644_9588 271
91 3300044684 Ga0466966_0068373 Ga0466966_0068373_471_1436 271
92 3300044712 Ga0453684_0001581 Ga0453684_0001581_19146_20087 271
93 3300044712 Ga0453684_0086806 Ga0453684_0086806_728_1681 271
94 3300044712 Ga0453684_0199428 Ga0453684_0199428_470_1414 271
95 3300044712 Ga0453684_0243707 Ga0453684_0243707_100_1038 271
96 3300045049 Ga0466959_0032329 Ga0466959_0032329_2829_3794 271
97 3300045051 Ga0451576_0093353 Ga0451576_0093353_1964_2917 271
98 3300045051 Ga0451576_0220720 Ga0451576_0220720_632_1576 271
99 3300046460 Ga0495638_0006434 Ga0495638_0006434_3277_4230 271
100 3300046473 Ga0495582_0153335 Ga0495582_0153335_303_1214 271
101 3300046477 Ga0495664_0042574 Ga0495664_0042574_312_1223 271
102 3300046514 Ga0495618_0018819 Ga0495618_0018819_1057_1968 271
103 3300046517 Ga0495630_0005144 Ga0495630_0005144_3999_4910 271
104 3300046533 Ga0495640_0030555 Ga0495640_0030555_1465_2376 271
105 3300046557 Ga0495622_0072261 Ga0495622_0072261_56_967 271
106 3300046559 Ga0495667_0107523 Ga0495667_0107523_606_1517 271
107 3300046642 Ga0495634_0002318 Ga0495634_0002318_2498_3409 271
108 3300047319 Ga0495674_0024623 Ga0495674_0024623_4567_5478 271
109 3300048917 Ga0496114_0043520 Ga0496114_0043520_1985_2956 271
110 3300049584 Ga0501068_0169577 Ga0501068_0169577_172_1125 271
111 3300049586 Ga0501070_0244472 Ga0501070_0244472_277_1230 271
112 3300050507 nmdc:mga05p37_1016_c1 nmdc:mga05p37_1016_c1_19493_20629 271
113 3300050507 nmdc:mga05p37_691_c1 nmdc:mga05p37_691_c1_17895_18911 271
114 3300050508 nmdc:mga09592_11431_c1 nmdc:mga09592_11431_c1_4657_5793 271
115 3300050508 nmdc:mga09592_366_c1 nmdc:mga09592_366_c1_25155_26171 271
116 3300050509 nmdc:mga0qj67_515_c1 nmdc:mga0qj67_515_c1_8522_9538 271
117 3300050509 nmdc:mga0qj67_913_c1 nmdc:mga0qj67_913_c1_13196_14332 271
118 3300050510 nmdc:mga06r32_1118_c1 nmdc:mga06r32_1118_c1_18956_19972 271
119 3300050510 nmdc:mga06r32_1968_c1 nmdc:mga06r32_1968_c1_6122_7258 271
120 3300050511 nmdc:mga08y16_465614_c1 nmdc:mga08y16_465614_c1_107_1003 271
121 3300050511 nmdc:mga08y16_74451_c1 nmdc:mga08y16_74451_c1_860_1774 271
122 3300050512 nmdc:mga0n895_472481_c1 nmdc:mga0n895_472481_c1_313_1239 271
123 3300050515 nmdc:mga0a205_293261_c1 nmdc:mga0a205_293261_c1_131_1063 271
124 iso_pu_bacteria 2547132512 2548848763 271
125 3300005290 Ga0065712_10099905 Ga0065712_100999052 272
126 3300005841 Ga0068863_100121614 Ga0068863_1001216142 272
127 3300006358 Ga0068871_100083277 Ga0068871_1000832772 272
128 3300014325 Ga0163163_10003138 Ga0163163_1000313812 272
129 3300035117 Ga0373953_0029123 Ga0373953_0029123_310_1197 272
130 3300035410 Ga0373924_0039847 Ga0373924_0039847_486_1373 272
131 3300036401 Ga0373937_0048924 Ga0373937_0048924_1747_2634 272
132 3300036401 Ga0373937_0151928 Ga0373937_0151928_1133_2059 272
133 3300046454 Ga0495592_0010040 Ga0495592_0010040_1605_2531 272
134 3300046463 Ga0495653_0238652 Ga0495653_0238652_71_958 272
135 3300046511 Ga0495608_0004894 Ga0495608_0004894_3186_4073 272
136 3300046517 Ga0495630_0273089 Ga0495630_0273089_173_1060 272
137 3300046559 Ga0495667_0000850 Ga0495667_0000850_15257_16144 272
138 3300046675 Ga0495657_0002449 Ga0495657_0002449_353_1240 272
139 3300046678 Ga0495599_0018908 Ga0495599_0018908_3029_3955 272
140 3300053085 Ga0495619_0075967 Ga0495619_0075967_1121_2008 272

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00174

Oxidored_molyb

Oxidoreductase molybdopterin binding domain

112

274

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdy-assembly7.cif.gz_G structural and biochemical identification of a novel bacterial oxidoreductase, w-containing cofactor 0.8824 16 267
1xdq-assembly3.cif.gz_C structural and biochemical identification of a novel bacterial oxidoreductase 0.8806 16 267
1xdy-assembly7.cif.gz_G structural and biochemical identification of a novel bacterial oxidoreductase, w-containing cofactor 0.8502 16 267
1xdq-assembly3.cif.gz_C structural and biochemical identification of a novel bacterial oxidoreductase 0.8393 16 267
2bii-assembly1.cif.gz_A crystal structure of nitrate-reducing fragment of assimilatory nitrate reductase from pichia angusta 0.7885 57 211
ID Description Score Start End Superfamily
1xdyH00 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8831 16 267 3.90.420.10
1xdyH00 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8419 16 267 3.90.420.10
af_I1N786_1_262_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8102 54 213 3.90.420.10
af_P11035_116_359_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.7953 53 210 3.90.420.10
af_A0A0R4IKF7_192_441_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.7949 53 211 3.90.420.10
ID Description Score Start End GO Terms
AF-A0A7C2FD97-F1-model_v4 deleted 0.9703 16 174
AF-A0A162C394-F1-model_v4 Oxidoreductase molybdopterin-binding domain-containing protein 0.967 39 185
AF-A0A3B9IG17-F1-model_v4 Protein-methionine-sulfoxide reductase catalytic subunit MsrP 0.9635 92 193
AF-A0A4Q3UER2-F1-model_v4 Protein-methionine-sulfoxide reductase catalytic subunit MsrP 0.9622 16 208
AF-A0A2W5VJQ3-F1-model_v4 deleted 0.9609 15 189

Feature Viewer

pLDDT pTM Quality
80.05 0.8 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map