F177947

General Info

Members Datasets Scaffolds Average Seq Length
139 111 279 252

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862507626|2862516098
Length 293
Sequence SAPQGEKRAVQYAFMRMNDPERTGDLRLRPLSARSVVLSLLLGTHPPQLPARELGRLVERFGVGGSTLRAALSRMVAAGDLLRTETGAGYRLSDRLLDRQTRQDEAVRPSTRAWDGDWEMVVITATGRGPAERADLRTRLAALRLAELREGVWLRPANLDRPLSVPLDQVAQHYTARPDRPAADLAGSLWPLDAWAGTARALLAHIDGADRPADRLAVFAAVVRHLLTDPVLPAALLPADWPGDALRAAYTDYRRELIGEIRASVGGPGGPGEIRGTSGTSGRTGNSGPGGRR

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
7 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
8 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
9 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
10 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
11 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
12 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
13 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
14 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
16 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
17 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
18 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
19 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
20 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
21 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
22 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
23 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
24 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
25 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
26 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
27 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
28 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
29 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
30 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
31 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
32 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
33 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
34 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
35 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
36 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
37 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
38 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
39 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
40 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
41 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
42 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
43 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
44 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
45 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
46 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
47 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
48 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
49 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
52 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
53 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
54 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
55 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
56 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
57 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
58 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
66 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
67 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
69 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
70 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
71 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
72 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
73 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
74 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
75 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
76 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
77 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
78 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
79 2643221647 Streptomyces sp. Root369 Isolate Unclassified
80 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
81 2643221714 Streptomyces sp. Root264 Isolate Unclassified
82 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
83 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
84 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
85 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
86 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
87 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
88 2867428634 Streptomyces sp. RP5T Isolate Unclassified
89 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
90 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
91 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
92 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
93 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
94 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
95 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
96 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
97 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
98 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
99 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
100 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
101 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
102 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
103 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
104 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
105 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
106 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
107 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
108 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
109 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
110 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
111 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.1
Metatranscriptomes 0
Isolates 25.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.63
Nodule 1.44
Rhizoplane 0
Rhizosphere 62.59
Stem 0
Stem Tuber 0
Unclassified 0.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10009665 3300003316 Bacteria 2981
2 rootH1_10009666 3300003316 Bacteria 4308
3 rootH1_10009666 3300003323 Bacteria 3028
4 rootH2_10096957 3300003320 Bacteria 3793
5 rootL2_10011216 3300003322 Bacteria 1684
6 rootH1_10012445 3300003323 Bacteria 2147
7 rootH1_10085250 3300003323 Bacteria 3667
8 Ga0070667_100023671 3300005367 Bacteria 5098
9 Ga0075365_10035296 3300006038 Bacteria 3234
10 Ga0075368_10003031 3300006042 Bacteria 5558
11 Ga0075363_100004314 3300006048 Bacteria 6192
12 Ga0075370_10039485 3300006353 Bacteria 2659
13 Ga0075370_10169858 3300006353 Bacteria 1282
14 Ga0099826_10080919 3300006948 Bacteria 2024
15 Ga0105246_10143875 3300011119 Bacteria 1796
16 Ga0182008_10003283 3300014497 Bacteria 9841
17 Ga0183367_1003 3300015688 Bacteria 814276
18 Ga0207647_10023995 3300025904 Bacteria 4025
19 Ga0209371_1009023 3300027312 Bacteria 3221
20 Ga0209813_10002130 3300027866 Bacteria 4515
21 Ga0307515_10013996 3300028794 Bacteria 14927
22 Ga0307515_10108501 3300028794 Bacteria 3270
23 Ga0268256_1008614 3300030500 Bacteria 3473
24 Ga0307511_10000229 3300030521 Bacteria 57050
25 Ga0307512_10001476 3300030522 Bacteria 33144
26 Ga0307512_10014472 3300030522 Bacteria 7348
27 Ga0307512_10060098 3300030522 Bacteria 2942
28 Ga0307513_10065332 3300031456 Bacteria 3828
29 Ga0307508_10010503 3300031616 Bacteria 8475
30 Ga0307508_10020610 3300031616 Bacteria 5986
31 Ga0307508_10070133 3300031616 Bacteria 3077
32 Ga0307508_10130444 3300031616 Bacteria 2117
33 Ga0307514_10060307 3300031649 Bacteria 2894
34 Ga0307516_10176486 3300031730 Bacteria 1873
35 Ga0307516_10410688 3300031730 Bacteria 1012
36 Ga0307518_10104491 3300031838 Bacteria 2024
37 Ga0307518_10139199 3300031838 Bacteria 1695
38 Ga0307510_10079111 3300033180 Bacteria 3208
39 Ga0395900_0254755 3300037418 Bacteria 1755
40 Ga0395898_0014623 3300037466 Bacteria 8060
41 Ga0395898_0015286 3300037466 Bacteria 7876
42 Ga0395905_0284618 3300037471 Bacteria 1540
43 Ga0395901_0070452 3300038443 Bacteria 3643
44 Ga0439436_0002016 3300041404 Bacteria 6035
45 Ga0451833_0052141 3300041491 Bacteria 1517
46 Ga0451843_1596277 3300041509 Bacteria 1243
47 Ga0451853_0290091 3300041512 Bacteria 2886
48 Ga0439448_0002999 3300042005 Bacteria 4636
49 Ga0439449_0013813 3300042007 Bacteria 3037
50 Ga0439455_0010643 3300042012 Bacteria 2027
51 Ga0439457_003640 3300042014 Bacteria 4169
52 Ga0439462_0007914 3300042015 Bacteria 2670
53 Ga0450903_000286 3300042138 Bacteria 11159
54 Ga0439458_0000329 3300042157 Bacteria 11847
55 Ga0466969_0001945 3300044656 Bacteria 11047
56 Ga0466972_0080103 3300044658 Bacteria 1555
57 Ga0466972_0081412 3300044658 Bacteria 1541
58 Ga0466966_0024056 3300044684 Bacteria 3986
59 Ga0466966_0194896 3300044684 Bacteria 1227
60 Ga0466961_0160292 3300044693 Bacteria 1402
61 Ga0466961_0214251 3300044693 Bacteria 1188
62 Ga0466963_0005975 3300044694 Bacteria 7173
63 Ga0466963_0189913 3300044694 Bacteria 1435
64 Ga0466963_0198230 3300044694 Bacteria 1404
65 Ga0466971_0013323 3300044719 Bacteria 3610
66 Ga0466971_0030917 3300044719 Bacteria 2396
67 Ga0466971_0092036 3300044719 Bacteria 1389
68 Ga0466970_0005974 3300044765 Bacteria 6067
69 Ga0466970_0027803 3300044765 Bacteria 2969
70 Ga0466957_0053131 3300044842 Bacteria 2469
71 Ga0466959_0140097 3300045049 Unclassified 1710
72 Ga0466958_0020507 3300045836 Bacteria 3856
73 Ga0466967_0062426 3300045976 Bacteria 3307
74 Ga0466967_0091918 3300045976 Bacteria 2758
75 Ga0466967_0152821 3300045976 Bacteria 2159
76 Ga0495632_0033438 3300046519 Bacteria 2640
77 Ga0495625_0008309 3300046660 Bacteria 8872
78 Ga0495613_0088442 3300046689 Bacteria 2245
79 Ga0495687_005592 3300047443 Bacteria 7959
80 Ga0495685_019980 3300047447 Bacteria 2302
81 Ga0495686_0035391 3300047472 Bacteria 3211
82 Ga0501033_0008745 3300049570 Bacteria 7829
83 Ga0501033_0195950 3300049570 Bacteria 1444
84 Ga0501034_0116513 3300049571 Bacteria 2660
85 Ga0501036_0074472 3300049572 Bacteria 2872
86 Ga0501036_0135282 3300049572 Bacteria 2080
87 Ga0501038_0003840 3300049574 Bacteria 13972
88 Ga0501043_0268773 3300049579 Bacteria 1309
89 Ga0501047_0016409 3300049581 Bacteria 7070
90 Ga0501047_0023747 3300049581 Bacteria 5886
91 Ga0501070_0644004 3300049586 Bacteria 842
92 Ga0501080_0016824 3300049742 Bacteria 6754
93 Ga0501035_0074270 3300049822 Bacteria 3008
94 Ga0501035_0208891 3300049822 Bacteria 1671
95 Ga0501044_0024012 3300049823 Bacteria 6477
96 Ga0501044_0095684 3300049823 Bacteria 2992
97 nmdc:mga03n38_10191_c1 3300050490 Bacteria 3448
98 nmdc:mga0yw44_32973_c1 3300050492 Bacteria 3022
99 nmdc:mga04h51_1407_c1 3300050495 Bacteria 5562
100 Ga0500583_0221529 3300053092 Bacteria 938
101 Ga0500650_0100629 3300053098 Bacteria 1352
102 Ga0500594_0016803 3300053118 Bacteria 1783
103 Ga0466962_0004306 3300061719 Bacteria 6825
104 Ga0466962_0012628 3300061719 Bacteria 4064
105 2862516098 2862507626 Bacteria 9425308
106 2585306527 2582581313 Bacteria 10042643
107 2585320059 2582581314 Bacteria 11452267
108 2644263368 2643221647 Bacteria 10741251
109 2644442087 2643221678 Bacteria 9540101
110 2644631684 2643221714 Bacteria 9015452
111 2785366621 2784746768 Bacteria 10036182
112 2786667699 2786546132 Bacteria 10419719
113 2808847157 2808606359 Bacteria 9866990
114 2812360802 2811994879 Bacteria 9313447
115 2812482730 2811994917 Bacteria 7761064
116 2862290139 2862281513 Bacteria 9621493
117 2867428694 2867428634 Bacteria 9590268
118 2877683929 2877676314 Bacteria 9512378
119 2912723120 2912715099 Bacteria 9460473
120 2912726594 2912723979 Bacteria 8557534
121 2919469977 2919468124 Bacteria 9133025
122 2932398699 2932398195 Bacteria 3847976
123 2946065068 2946064051 Bacteria 8957905
124 2946073499 2946072368 Bacteria 8999607
125 2947232365 2947224130 Bacteria 9938529
126 2954389222 2954380949 Bacteria 10050426
127 2954673839 2954673503 Bacteria 9685905
128 2954690153 2954682443 Bacteria 9862841
129 2954702218 2954701450 Bacteria 10834262
130 2954718824 2954711539 Bacteria 10867210
131 2954728793 2954721474 Bacteria 10456478
132 2954733018 2954731030 Bacteria 10243860
133 2954747693 2954740390 Bacteria 10229294
134 2954751898 2954749733 Bacteria 10366972
135 2954766815 2954759201 Bacteria 9358192
136 3006394416 3006393351 Bacteria 6615579
137 3006496976 3006493962 Bacteria 8825450
138 8008560560 8008558824 Bacteria 10610750
139 8008581143 8008574985 Bacteria 7815457
140 8056832733 8056829672 Bacteria 9045328
141 rootH1_10009665
142 rootH1_10009666
143 rootH2_10096957
144 rootL2_10011216
145 rootH1_10012445
146 rootH1_10085250
147 Ga0070667_100023671
148 Ga0075365_10035296
149 Ga0075368_10003031
150 Ga0075363_100004314
151 Ga0075370_10039485
152 Ga0075370_10169858
153 Ga0099826_10080919
154 Ga0105246_10143875
155 Ga0182008_10003283
156 Ga0183367_1003
157 Ga0207647_10023995
158 Ga0209371_1009023
159 Ga0209813_10002130
160 Ga0307515_10013996
161 Ga0307515_10108501
162 Ga0268256_1008614
163 Ga0307511_10000229
164 Ga0307512_10001476
165 Ga0307512_10014472
166 Ga0307512_10060098
167 Ga0307513_10065332
168 Ga0307508_10010503
169 Ga0307508_10020610
170 Ga0307508_10070133
171 Ga0307508_10130444
172 Ga0307514_10060307
173 Ga0307516_10176486
174 Ga0307516_10410688
175 Ga0307518_10104491
176 Ga0307518_10139199
177 Ga0307510_10079111
178 Ga0395900_0254755
179 Ga0395898_0014623
180 Ga0395898_0015286
181 Ga0395905_0284618
182 Ga0395901_0070452
183 Ga0439436_0002016
184 Ga0451833_0052141
185 Ga0451843_1596277
186 Ga0451853_0290091
187 Ga0439448_0002999
188 Ga0439449_0013813
189 Ga0439455_0010643
190 Ga0439457_003640
191 Ga0439462_0007914
192 Ga0450903_000286
193 Ga0439458_0000329
194 Ga0466969_0001945
195 Ga0466972_0080103
196 Ga0466972_0081412
197 Ga0466966_0024056
198 Ga0466966_0194896
199 Ga0466961_0160292
200 Ga0466961_0214251
201 Ga0466963_0005975
202 Ga0466963_0189913
203 Ga0466963_0198230
204 Ga0466971_0013323
205 Ga0466971_0030917
206 Ga0466971_0092036
207 Ga0466970_0005974
208 Ga0466970_0027803
209 Ga0466957_0053131
210 Ga0466959_0140097
211 Ga0466958_0020507
212 Ga0466967_0062426
213 Ga0466967_0091918
214 Ga0466967_0152821
215 Ga0495632_0033438
216 Ga0495625_0008309
217 Ga0495613_0088442
218 Ga0495687_005592
219 Ga0495685_019980
220 Ga0495686_0035391
221 Ga0501033_0008745
222 Ga0501033_0195950
223 Ga0501034_0116513
224 Ga0501036_0074472
225 Ga0501036_0135282
226 Ga0501038_0003840
227 Ga0501043_0268773
228 Ga0501047_0016409
229 Ga0501047_0023747
230 Ga0501070_0644004
231 Ga0501080_0016824
232 Ga0501035_0074270
233 Ga0501035_0208891
234 Ga0501044_0024012
235 Ga0501044_0095684
236 nmdc:mga03n38_10191_c1
237 nmdc:mga0yw44_32973_c1
238 nmdc:mga04h51_1407_c1
239 Ga0500583_0221529
240 Ga0500650_0100629
241 Ga0500594_0016803
242 Ga0466962_0004306
243 Ga0466962_0012628
244 2862516098
245 2585306527
246 2585320059
247 2644263368
248 2644442087
249 2644631684
250 2785366621
251 2786667699
252 2808847157
253 2812360802
254 2812482730
255 2862290139
256 2867428694
257 2877683929
258 2912723120
259 2912726594
260 2919469977
261 2932398699
262 2946065068
263 2946073499
264 2947232365
265 2954389222
266 2954673839
267 2954690153
268 2954702218
269 2954718824
270 2954728793
271 2954733018
272 2954747693
273 2954751898
274 2954766815
275 3006394416
276 3006496976
277 8008560560
278 8008581143
279 8056832733

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07848

PaaX

PaaX-like protein

32

96

0.98

PF20803

PaaX_M

PaaX protein central Cas2-like domain

111

176

0.92

PF08223

PaaX_C

PaaX-like protein C-terminal domain

192

263

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kfw-assembly1.cif.gz_X uncharacterized protein rv0674 from mycobacterium tuberculosis 0.9408 22 247
3kfw-assembly1.cif.gz_X uncharacterized protein rv0674 from mycobacterium tuberculosis 0.9024 22 247
6skl-assembly1.cif.gz_4 cryo-em structure of the cmg fork protection complex at a replication fork - conformation 1 0.8167 23 80
4yii-assembly1.cif.gz_A structure of an apc2-ubch10 complex reveals distinctive cullin-ring ligase mechanism for anaphase-promoting complex/cyclosome 0.8095 23 80
5a31-assembly1.cif.gz_N structure of the human apc-cdh1-hsl1-ubch10 complex. 0.8095 23 80
ID Description Score Start End Superfamily
af_I6WZ26_161_240_1.20.58.1460 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.9903 180 249 1.20.58.1460
af_I6WZ26_3_77_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9785 21 92 1.10.10.10
af_I6WZ26_79_160_3.30.70.2650 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9502 96 178 3.30.70.2650
af_I6WZ26_79_160_3.30.70.2650 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9392 96 178 3.30.70.2650
af_I6WZ26_3_77_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9278 21 92 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7K2VDW6-F1-model_v4 PaaX domain-containing protein, C- domain protein 0.9873 128 247 GO:0006351
AF-A0A6I4M927-F1-model_v4 PaaX domain-containing protein, C-domain protein 0.9786 18 248 GO:0006351
AF-A0A0L8QKJ4-F1-model_v4 deleted 0.9752 124 244
AF-A0A498DZA8-F1-model_v4 PaaX domain-containing protein, C-domain protein 0.9704 13 248 GO:0006351
AF-D7CH27-F1-model_v4 Putative transcriptional regulator, PaaX family protein 0.9691 13 247 GO:0006351

Map