F173835

General Info

Members Datasets Scaffolds Average Seq Length
138 93 276 217

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0731086|Ga0395901_0731086_65_793
Length 242
Sequence VSNRHAEAGIPARAAPIVARYRALVSTYVIVGGHGRVALLTASALDKQGHVVRSLIRKQEQGADVEATGSVPYVLDIEGSDVGDFVDAFDAADAVVFSAGGGADGNAERKRTVDLEGSLKSIEAAERAGIRRFVQVSAMGVDEPLPDDTDPVWRAYVEAKRDADAALRASGLDWTIVRPGRLTDGPATDAVRMGAGLPRGEVSRADVAAVLVAVLEDDSTIGVQFDLTSGEQTISEAIASLG

Samples

Sample ID Description Type Environment
1 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
2 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
3 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
4 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
5 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
8 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
13 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
16 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
18 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
20 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
21 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
22 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
23 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
24 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
25 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
26 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
27 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
28 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
29 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
30 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
31 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
32 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
35 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
36 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
37 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
38 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
39 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
40 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
43 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
44 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
45 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
46 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
47 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
48 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
49 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
50 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
53 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
55 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
56 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
57 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
58 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
59 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
60 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
61 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
62 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
63 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
64 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
65 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
66 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
67 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
68 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
69 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
70 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
71 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
72 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
73 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
74 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
75 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
76 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
77 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
78 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
79 2619618881 Frankia sp. ACN1ag Isolate Unclassified
80 2619619003 Frankia sp. CpI1-P Isolate Nodule
81 2626541554 Frankia sp. AvcI.1 Isolate Nodule
82 2643221576 Nocardioides sp. Root614 Isolate Unclassified
83 2643221590 Nocardioides sp. Root682 Isolate Unclassified
84 2643221604 Nocardioides sp. Root190 Isolate Unclassified
85 2643221615 Nocardioides sp. Root224 Isolate Unclassified
86 2643221617 Nocardioides sp. Root79 Isolate Unclassified
87 2643221620 Nocardioides sp. Root240 Isolate Unclassified
88 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
89 2738541305 Nocardioides sp. CF167 Isolate Unclassified
90 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
91 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
92 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
93 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 88.41
Metatranscriptomes 0
Isolates 11.59

Biome Distribution

Category Percentage (%)
Aerial Root 0.72
Bulb 0
Endosphere 18.84
Nodule 1.45
Rhizoplane 1.45
Rhizosphere 68.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395901_0731086 3300038443 Bacteria 984
2 Ga0068867_100174070 3300005459 Bacteria 1707
3 Ga0070702_100412173 3300005615 Bacteria 970
4 Ga0068860_100000882 3300005843 Bacteria 33314
5 Ga0081455_10159729 3300005937 Bacteria 1729
6 Ga0081539_10003160 3300005985 Bacteria 20901
7 Ga0075365_10026302 3300006038 Bacteria 3693
8 Ga0075365_10031274 3300006038 Bacteria 3414
9 Ga0075365_10281258 3300006038 Bacteria 1171
10 Ga0075368_10007476 3300006042 Bacteria 3853
11 Ga0075363_100003339 3300006048 Bacteria 6811
12 Ga0075363_100076045 3300006048 Bacteria 1830
13 Ga0075363_100150283 3300006048 Bacteria 1314
14 Ga0075364_10012965 3300006051 Bacteria 5116
15 Ga0075364_10075858 3300006051 Bacteria 2218
16 Ga0075367_10002998 3300006178 Bacteria 7901
17 Ga0075370_10016795 3300006353 Bacteria 3943
18 Ga0075370_10072994 3300006353 Bacteria 1965
19 Ga0075370_10184623 3300006353 Bacteria 1228
20 Ga0111539_10439010 3300009094 Bacteria 1520
21 Ga0111539_11082601 3300009094 Bacteria 931
22 Ga0105243_10322087 3300009148 Bacteria 1409
23 Ga0157380_10157338 3300014326 Bacteria 1971
24 Ga0157380_10201612 3300014326 Bacteria 1766
25 Ga0207648_10104424 3300026089 Bacteria 2485
26 Ga0209813_10005742 3300027866 Bacteria 3029
27 Ga0209813_10065804 3300027866 Bacteria 1168
28 Ga0268264_10005476 3300028381 Bacteria 10765
29 Ga0307405_10045276 3300031731 Bacteria 2695
30 Ga0307406_10334980 3300031901 Bacteria 1176
31 Ga0307406_10503118 3300031901 Bacteria 983
32 Ga0307407_10197701 3300031903 Bacteria 1345
33 Ga0307409_100004601 3300031995 Bacteria 7784
34 Ga0307409_100015214 3300031995 Bacteria 5040
35 Ga0307409_100670285 3300031995 Bacteria 1033
36 Ga0307416_100138944 3300032002 Bacteria 2204
37 Ga0307416_100244978 3300032002 Bacteria 1740
38 Ga0307416_100976690 3300032002 Bacteria 949
39 Ga0307416_101612747 3300032002 Bacteria 754
40 Ga0307411_10524378 3300032005 Bacteria 1006
41 Ga0307415_100003484 3300032126 Bacteria 8022
42 Ga0307415_100023852 3300032126 Bacteria 3807
43 Ga0307415_100046075 3300032126 Bacteria 2927
44 Ga0307415_100069290 3300032126 Bacteria 2473
45 Ga0373947_0195645 3300035725 Bacteria 1321
46 Ga0395900_0411109 3300037418 Bacteria 1315
47 Ga0395905_0270296 3300037471 Bacteria 1586
48 Ga0439431_0047939 3300041997 Bacteria 1102
49 Ga0439442_015685 3300042002 Bacteria 1562
50 Ga0466965_0280124 3300044683 Bacteria 900
51 Ga0466966_0012033 3300044684 Bacteria 5734
52 Ga0466966_0054963 3300044684 Bacteria 2522
53 Ga0466961_0029266 3300044693 Bacteria 3542
54 Ga0466961_0075085 3300044693 Bacteria 2143
55 Ga0466963_0035204 3300044694 Bacteria 3261
56 Ga0466963_0093986 3300044694 Bacteria 2045
57 Ga0466971_0033140 3300044719 Bacteria 2315
58 Ga0466968_0239128 3300044735 Bacteria 860
59 Ga0466957_0059894 3300044842 Bacteria 2334
60 Ga0466957_0228389 3300044842 Bacteria 1231
61 Ga0466957_0238673 3300044842 Bacteria 1205
62 Ga0466960_0003594 3300044901 Bacteria 5982
63 Ga0466960_0050065 3300044901 Bacteria 2013
64 Ga0466960_0093618 3300044901 Bacteria 1536
65 Ga0466960_0108087 3300044901 Bacteria 1441
66 Ga0466959_0060682 3300045049 Bacteria 2751
67 Ga0466959_0213900 3300045049 Bacteria 1339
68 Ga0466958_0149048 3300045836 Bacteria 1475
69 Ga0466958_0243195 3300045836 Bacteria 1150
70 Ga0466967_0017750 3300045976 Bacteria 5663
71 Ga0466967_0046029 3300045976 Bacteria 3795
72 Ga0495620_0180910 3300046515 Bacteria 815
73 Ga0495635_0564625 3300046663 Bacteria 745
74 Ga0495680_0353440 3300047322 Bacteria 1023
75 Ga0496104_0099838 3300048907 Bacteria 2778
76 Ga0496105_0196034 3300048908 Bacteria 1650
77 Ga0501031_0094792 3300049568 Bacteria 1947
78 Ga0501031_0199355 3300049568 Bacteria 1306
79 Ga0501032_0319780 3300049569 Bacteria 1002
80 Ga0501036_0051479 3300049572 Bacteria 3487
81 Ga0501036_0063323 3300049572 Bacteria 3132
82 Ga0501039_0032853 3300049575 Bacteria 4002
83 Ga0501040_0013751 3300049576 Bacteria 5325
84 Ga0501041_0169553 3300049577 Bacteria 1366
85 Ga0501042_0062857 3300049578 Bacteria 2653
86 Ga0501048_0047362 3300049582 Bacteria 3068
87 Ga0501048_0680836 3300049582 Bacteria 738
88 Ga0501067_0326674 3300049583 Bacteria 854
89 Ga0501068_0021347 3300049584 Bacteria 3781
90 Ga0501069_0238778 3300049585 Bacteria 1059
91 Ga0501071_0020812 3300049587 Bacteria 4563
92 Ga0501071_0076042 3300049587 Bacteria 2452
93 Ga0501071_0113308 3300049587 Bacteria 2006
94 Ga0501072_0162187 3300049588 Bacteria 1783
95 Ga0501072_0225586 3300049588 Bacteria 1493
96 Ga0501072_0360131 3300049588 Bacteria 1155
97 Ga0501074_0196466 3300049590 Bacteria 1438
98 Ga0501075_0055654 3300049591 Bacteria 2977
99 Ga0501076_0309186 3300049592 Bacteria 1296
100 Ga0501079_0110698 3300049741 Bacteria 2134
101 Ga0501079_0168006 3300049741 Bacteria 1711
102 Ga0501081_0311739 3300049743 Bacteria 1155
103 Ga0501081_0501192 3300049743 Bacteria 905
104 Ga0501035_0165149 3300049822 Bacteria 1915
105 Ga0501035_0621168 3300049822 Bacteria 879
106 nmdc:mga03n38_10434_c1 3300050490 Bacteria 3417
107 nmdc:mga03n38_382042_c1 3300050490 Bacteria 772
108 nmdc:mga00v17_14605_c1 3300050491 Bacteria 4388
109 nmdc:mga00v17_40995_c1 3300050491 Bacteria 2779
110 nmdc:mga0yw44_196898_c1 3300050492 Bacteria 1330
111 nmdc:mga0yw44_296578_c1 3300050492 Bacteria 1082
112 nmdc:mga06z11_12129_c1 3300050494 Bacteria 3739
113 nmdc:mga06z11_27463_c1 3300050494 Bacteria 2721
114 nmdc:mga07m45_40262_c1 3300050496 Bacteria 2614
115 nmdc:mga08y16_389636_c1 3300050511 Bacteria 1427
116 Ga0500644_0000011 3300053088 Bacteria 125595
117 Ga0500556_0001332 3300053104 Bacteria 10929
118 Ga0501084_1006457 3300054114 Bacteria 700
119 Ga0501082_0397667 3300060353 Bacteria 1202
120 Ga0466962_0007590 3300061719 Bacteria 5203
121 Ga0530510_0428790 3300061734 Bacteria 998
122 Ga0530510_0485791 3300061734 Bacteria 936
123 2579853374 2579778521 Bacteria 7624758
124 2619855319 2619618881 Bacteria 7521104
125 2620349194 2619619003 Bacteria 7619552
126 2626639762 2626541554 Bacteria 7741902
127 2643889923 2643221576 Bacteria 5214352
128 2643958979 2643221590 Bacteria 5214697
129 2644033867 2643221604 Bacteria 5014917
130 2644089129 2643221615 Bacteria 5487866
131 2644102622 2643221617 Bacteria 5139111
132 2644118284 2643221620 Bacteria 5134593
133 2644318974 2643221657 Bacteria 5490246
134 2738867468 2738541305 Bacteria 4910150
135 2753069327 2751185734 Bacteria 8863695
136 2812362956 2811994880 Bacteria 4147780
137 2857482564 2857481737 Bacteria 4761446
138 2984593806 2984592036 Bacteria 3670284
139 Ga0395901_0731086
140 Ga0068867_100174070
141 Ga0070702_100412173
142 Ga0068860_100000882
143 Ga0081455_10159729
144 Ga0081539_10003160
145 Ga0075365_10026302
146 Ga0075365_10031274
147 Ga0075365_10281258
148 Ga0075368_10007476
149 Ga0075363_100003339
150 Ga0075363_100076045
151 Ga0075363_100150283
152 Ga0075364_10012965
153 Ga0075364_10075858
154 Ga0075367_10002998
155 Ga0075370_10016795
156 Ga0075370_10072994
157 Ga0075370_10184623
158 Ga0111539_10439010
159 Ga0111539_11082601
160 Ga0105243_10322087
161 Ga0157380_10157338
162 Ga0157380_10201612
163 Ga0207648_10104424
164 Ga0209813_10005742
165 Ga0209813_10065804
166 Ga0268264_10005476
167 Ga0307405_10045276
168 Ga0307406_10334980
169 Ga0307406_10503118
170 Ga0307407_10197701
171 Ga0307409_100004601
172 Ga0307409_100015214
173 Ga0307409_100670285
174 Ga0307416_100138944
175 Ga0307416_100244978
176 Ga0307416_100976690
177 Ga0307416_101612747
178 Ga0307411_10524378
179 Ga0307415_100003484
180 Ga0307415_100023852
181 Ga0307415_100046075
182 Ga0307415_100069290
183 Ga0373947_0195645
184 Ga0395900_0411109
185 Ga0395905_0270296
186 Ga0439431_0047939
187 Ga0439442_015685
188 Ga0466965_0280124
189 Ga0466966_0012033
190 Ga0466966_0054963
191 Ga0466961_0029266
192 Ga0466961_0075085
193 Ga0466963_0035204
194 Ga0466963_0093986
195 Ga0466971_0033140
196 Ga0466968_0239128
197 Ga0466957_0059894
198 Ga0466957_0228389
199 Ga0466957_0238673
200 Ga0466960_0003594
201 Ga0466960_0050065
202 Ga0466960_0093618
203 Ga0466960_0108087
204 Ga0466959_0060682
205 Ga0466959_0213900
206 Ga0466958_0149048
207 Ga0466958_0243195
208 Ga0466967_0017750
209 Ga0466967_0046029
210 Ga0495620_0180910
211 Ga0495635_0564625
212 Ga0495680_0353440
213 Ga0496104_0099838
214 Ga0496105_0196034
215 Ga0501031_0094792
216 Ga0501031_0199355
217 Ga0501032_0319780
218 Ga0501036_0051479
219 Ga0501036_0063323
220 Ga0501039_0032853
221 Ga0501040_0013751
222 Ga0501041_0169553
223 Ga0501042_0062857
224 Ga0501048_0047362
225 Ga0501048_0680836
226 Ga0501067_0326674
227 Ga0501068_0021347
228 Ga0501069_0238778
229 Ga0501071_0020812
230 Ga0501071_0076042
231 Ga0501071_0113308
232 Ga0501072_0162187
233 Ga0501072_0225586
234 Ga0501072_0360131
235 Ga0501074_0196466
236 Ga0501075_0055654
237 Ga0501076_0309186
238 Ga0501079_0110698
239 Ga0501079_0168006
240 Ga0501081_0311739
241 Ga0501081_0501192
242 Ga0501035_0165149
243 Ga0501035_0621168
244 nmdc:mga03n38_10434_c1
245 nmdc:mga03n38_382042_c1
246 nmdc:mga00v17_14605_c1
247 nmdc:mga00v17_40995_c1
248 nmdc:mga0yw44_196898_c1
249 nmdc:mga0yw44_296578_c1
250 nmdc:mga06z11_12129_c1
251 nmdc:mga06z11_27463_c1
252 nmdc:mga07m45_40262_c1
253 nmdc:mga08y16_389636_c1
254 Ga0500644_0000011
255 Ga0500556_0001332
256 Ga0501084_1006457
257 Ga0501082_0397667
258 Ga0466962_0007590
259 Ga0530510_0428790
260 Ga0530510_0485791
261 2579853374
262 2619855319
263 2620349194
264 2626639762
265 2643889923
266 2643958979
267 2644033867
268 2644089129
269 2644102622
270 2644118284
271 2644318974
272 2738867468
273 2753069327
274 2812362956
275 2857482564
276 2984593806

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13460

NAD_binding_10

NAD(P)H-binding

32

218

0.88

PF05368

NmrA

NmrA-like family

28

184

0.83

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

28

188

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e8x-assembly1.cif.gz_A-2 putative nad-dependent epimerase/dehydratase from bacillus halodurans. 0.9732 1 212
3e8x-assembly1.cif.gz_A-2 putative nad-dependent epimerase/dehydratase from bacillus halodurans. 0.9687 1 212
3dqp-assembly1.cif.gz_A-2 crystal structure of the oxidoreductase ylbe from lactococcus lactis, northeast structural genomics consortium target kr121. 0.8936 1 212
3dqp-assembly1.cif.gz_A-2 crystal structure of the oxidoreductase ylbe from lactococcus lactis, northeast structural genomics consortium target kr121. 0.8855 1 212
7er7-assembly1.cif.gz_A crystal structure of hyman biliverdin ix-beta reductase b with tamibarotene (a80) 0.883 2 204
ID Description Score Start End Superfamily
3e8xA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9649 1 212 3.40.50.720
3e8xA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9604 1 212 3.40.50.720
af_Q2FWB1_2_220_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9507 3 212 3.40.50.720
af_Q04304_5_227_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9447 3 212 3.40.50.720
af_Q9Y7K0_5_242_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.943 5 212 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7K2YCD3-F1-model_v4 NAD(P)H-binding protein 0.9908 1 97
AF-A0A7S8HF82-F1-model_v4 SDR family oxidoreductase 0.9801 1 212
AF-A0A163Q713-F1-model_v4 NAD-dependent dehydratase 0.9791 1 212
AF-A0A7S8HF82-F1-model_v4 SDR family oxidoreductase 0.9756 1 212
AF-A0A0V8HA46-F1-model_v4 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains 0.975 1 212

Map