F173554

General Info

Members Datasets Scaffolds Average Seq Length
138 73 276 328

Family's Representative Sequence

Representative Sequence 3300031238|Ga0265332_10048519|Ga0265332_100485192
Length 371
Sequence VGEGNGERTRLTRFRIHQQKLETQPSDMNEPLLEVKNLKVHFPVNSGPFTRAKEFVRAVDGVGFTIAPGETVGLVGESGCGKTTLGRAVIRLVEATEGQIIFEGEDLTRLKGSALRTRRRRFQMIFQDPYGSLNPRATVENIIGEALDIHHLAANAAARRQRVENLLQDVGLDASHAQRFPHEFSGGQRQRIGIARALAVEPKLIVCDEPVSALDVSVQAQIVNLLRGLQREHGIAYLFVAHDLAVVRHLSRRILVMYLGRIVEAGGAKKTCQSPKHPYTQALISAVPVVDPDSKRQRIILSGDVPSPIHPPSGCPFHPRCPVAEARCRTEVPALREIEPGHWVACHLAGGPAEITEKSSGRTETAPRAGA

Samples

Sample ID Description Type Environment
1 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
9 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
10 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
11 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
24 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
25 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
26 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
27 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
28 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
29 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
30 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
31 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
32 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
33 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
34 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
35 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
36 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
40 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
43 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
44 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
45 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
46 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
47 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
48 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
49 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
50 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
51 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
52 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
53 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
54 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
55 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
56 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
57 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
58 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
59 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
60 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
61 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
62 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
63 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
64 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
71 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
72 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
73 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.55
Stem 0
Stem Tuber 0
Unclassified 0.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265332_10048519 3300031238 Bacteria 1826
2 Ga0070690_100007687 3300005330 Bacteria 6180
3 Ga0070689_100002378 3300005340 Bacteria 12265
4 Ga0070689_100006231 3300005340 Bacteria 8234
5 Ga0070689_100222751 3300005340 Bacteria 1548
6 Ga0070688_100058188 3300005365 Bacteria 2433
7 Ga0070709_10112656 3300005434 Bacteria 1831
8 Ga0068855_100312994 3300005563 Bacteria 1737
9 Ga0068856_100017497 3300005614 Bacteria 6946
10 Ga0068856_100021622 3300005614 Bacteria 6252
11 Ga0068863_100326113 3300005841 Bacteria 1492
12 Ga0070717_10545827 3300006028 Bacteria 1049
13 Ga0070715_10043253 3300006163 Bacteria 1898
14 Ga0097621_100396279 3300006237 Bacteria 1235
15 Ga0075428_100467287 3300006844 Bacteria 1351
16 Ga0097620_100224232 3300006931 Bacteria 1968
17 Ga0105240_10025315 3300009093 Bacteria 7800
18 Ga0105240_10057328 3300009093 Bacteria 4867
19 Ga0105240_10104418 3300009093 Bacteria 3441
20 Ga0111539_10086352 3300009094 Bacteria 3687
21 Ga0105242_10030202 3300009176 Bacteria 4327
22 Ga0105238_10047765 3300009551 Bacteria 4315
23 Ga0207685_10030349 3300025905 Bacteria 1923
24 Ga0207695_10017082 3300025913 Bacteria 8459
25 Ga0207695_10089429 3300025913 Bacteria 3096
26 Ga0207695_10169131 3300025913 Bacteria 2112
27 Ga0207695_10344704 3300025913 Bacteria 1377
28 Ga0207694_10076314 3300025924 Bacteria 2624
29 Ga0207670_10032130 3300025936 Bacteria 3372
30 Ga0207670_10056298 3300025936 Bacteria 2661
31 Ga0207702_10005839 3300026078 Bacteria 10703
32 Ga0207702_10028472 3300026078 Bacteria 4644
33 Ga0265337_1000020 3300028556 Bacteria 74117
34 Ga0265337_1001238 3300028556 Bacteria 12919
35 Ga0265337_1002542 3300028556 Bacteria 8303
36 Ga0265337_1004447 3300028556 Bacteria 5814
37 Ga0265337_1019504 3300028556 Bacteria 2136
38 Ga0265326_10050600 3300028558 Bacteria 1177
39 Ga0265319_1000004 3300028563 Bacteria 305085
40 Ga0265319_1009851 3300028563 Bacteria 4032
41 Ga0265334_10040240 3300028573 Bacteria 1832
42 Ga0265334_10059073 3300028573 Bacteria 1450
43 Ga0265323_10003901 3300028653 Bacteria 6484
44 Ga0265323_10005997 3300028653 Bacteria 5139
45 Ga0265323_10037059 3300028653 Bacteria 1789
46 Ga0265336_10002578 3300028666 Bacteria 7408
47 Ga0265336_10031723 3300028666 Bacteria 1640
48 Ga0265338_10000208 3300028800 Bacteria 109817
49 Ga0265338_10000533 3300028800 Bacteria 66710
50 Ga0265338_10001089 3300028800 Bacteria 45131
51 Ga0265338_10002163 3300028800 Bacteria 30175
52 Ga0265338_10002370 3300028800 Bacteria 28416
53 Ga0265338_10002459 3300028800 Bacteria 27681
54 Ga0265338_10004044 3300028800 Bacteria 20120
55 Ga0265338_10009223 3300028800 Bacteria 11811
56 Ga0265338_10025276 3300028800 Bacteria 6033
57 Ga0265338_10051408 3300028800 Bacteria 3710
58 Ga0265338_10080896 3300028800 Bacteria 2727
59 Ga0265338_10082702 3300028800 Bacteria 2687
60 Ga0265338_10165267 3300028800 Bacteria 1704
61 Ga0265338_10246401 3300028800 Bacteria 1320
62 Ga0265324_10000237 3300029957 Bacteria 41672
63 Ga0265324_10020216 3300029957 Bacteria 2393
64 Ga0265324_10039139 3300029957 Bacteria 1644
65 Ga0265324_10041242 3300029957 Bacteria 1597
66 Ga0265328_10011892 3300031239 Bacteria 3471
67 Ga0265320_10005204 3300031240 Bacteria 8394
68 Ga0265320_10005298 3300031240 Bacteria 8304
69 Ga0265320_10008230 3300031240 Bacteria 6399
70 Ga0265320_10017937 3300031240 Bacteria 3912
71 Ga0265320_10035420 3300031240 Bacteria 2530
72 Ga0265325_10022291 3300031241 Bacteria 3471
73 Ga0265329_10009751 3300031242 Bacteria 3560
74 Ga0265340_10002742 3300031247 Bacteria 10028
75 Ga0265340_10009490 3300031247 Bacteria 5219
76 Ga0265340_10021558 3300031247 Bacteria 3305
77 Ga0265339_10008976 3300031249 Bacteria 6323
78 Ga0265339_10116053 3300031249 Bacteria 1380
79 Ga0265339_10119480 3300031249 Bacteria 1356
80 Ga0265327_10001027 3300031251 Bacteria 39376
81 Ga0265316_10007288 3300031344 Bacteria 10434
82 Ga0265316_10016421 3300031344 Bacteria 6421
83 Ga0265316_10046562 3300031344 Bacteria 3435
84 Ga0265316_10057042 3300031344 Bacteria 3047
85 Ga0265316_10094323 3300031344 Bacteria 2280
86 Ga0265316_10106162 3300031344 Bacteria 2130
87 Ga0265316_10150997 3300031344 Bacteria 1740
88 Ga0265316_10209938 3300031344 Bacteria 1441
89 Ga0307513_10205651 3300031456 Bacteria 1805
90 Ga0265313_10001769 3300031595 Bacteria 19806
91 Ga0265313_10006871 3300031595 Bacteria 7928
92 Ga0265314_10003880 3300031711 Bacteria 14234
93 Ga0265314_10050759 3300031711 Bacteria 2893
94 Ga0265314_10079045 3300031711 Bacteria 2175
95 Ga0373944_0020848 3300035089 Bacteria 1892
96 Ga0373927_0004018 3300035695 Bacteria 10408
97 Ga0373937_0067877 3300036401 Unclassified 3287
98 Ga0373937_0258943 3300036401 Bacteria 1640
99 Ga0466963_0015802 3300044694 Bacteria 4684
100 Ga0453684_0030513 3300044712 Bacteria 7614
101 Ga0466970_0049649 3300044765 Bacteria 2237
102 Ga0451576_0051389 3300045051 Bacteria 4322
103 Ga0451576_0169908 3300045051 Bacteria 2276
104 Ga0451576_0297727 3300045051 Bacteria 1687
105 Ga0451576_0437231 3300045051 Bacteria 1373
106 Ga0495592_0190276 3300046454 Bacteria 1391
107 Ga0495618_0001508 3300046514 Bacteria 15629
108 Ga0495628_0000560 3300046516 Bacteria 34267
109 Ga0495628_0365848 3300046516 Bacteria 1058
110 Ga0495628_0388454 3300046516 Bacteria 1021
111 Ga0495630_0045446 3300046517 Bacteria 3282
112 Ga0495630_0291434 3300046517 Bacteria 1247
113 Ga0495640_0033426 3300046533 Bacteria 3653
114 Ga0495586_0003918 3300046535 Bacteria 7982
115 Ga0495645_0063838 3300046543 Bacteria 2665
116 Ga0495645_0208955 3300046543 Bacteria 1319
117 Ga0495622_0038306 3300046557 Bacteria 2232
118 Ga0495634_0004187 3300046642 Bacteria 11394
119 Ga0495657_0026698 3300046675 Bacteria 4087
120 Ga0495599_0122379 3300046678 Bacteria 1617
121 Ga0495613_0062022 3300046689 Bacteria 2736
122 Ga0495674_0253382 3300047319 Bacteria 1448
123 Ga0495680_0333290 3300047322 Bacteria 1060
124 Ga0495684_0134328 3300047471 Bacteria 1857
125 Ga0501032_0020083 3300049569 Bacteria 4658
126 Ga0501033_0001976 3300049570 Bacteria 17862
127 Ga0501033_0020898 3300049570 Bacteria 4942
128 Ga0501038_0212919 3300049574 Bacteria 1545
129 Ga0501038_0262945 3300049574 Bacteria 1363
130 Ga0501043_0171786 3300049579 Bacteria 1691
131 Ga0501047_0075834 3300049581 Bacteria 3236
132 Ga0501035_0026117 3300049822 Bacteria 5347
133 Ga0501035_0063665 3300049822 Bacteria 3279
134 Ga0501044_0000741 3300049823 Bacteria 39342
135 Ga0501044_0079992 3300049823 Bacteria 3310
136 nmdc:mga06r32_177371_c1 3300050510 Bacteria 2115
137 nmdc:mga08y16_742240_c1 3300050511 Bacteria 978
138 2816508358 2816332139 Bacteria 9138787
139 Ga0265332_10048519
140 Ga0070690_100007687
141 Ga0070689_100002378
142 Ga0070689_100006231
143 Ga0070689_100222751
144 Ga0070688_100058188
145 Ga0070709_10112656
146 Ga0068855_100312994
147 Ga0068856_100017497
148 Ga0068856_100021622
149 Ga0068863_100326113
150 Ga0070717_10545827
151 Ga0070715_10043253
152 Ga0097621_100396279
153 Ga0075428_100467287
154 Ga0097620_100224232
155 Ga0105240_10025315
156 Ga0105240_10057328
157 Ga0105240_10104418
158 Ga0111539_10086352
159 Ga0105242_10030202
160 Ga0105238_10047765
161 Ga0207685_10030349
162 Ga0207695_10017082
163 Ga0207695_10089429
164 Ga0207695_10169131
165 Ga0207695_10344704
166 Ga0207694_10076314
167 Ga0207670_10032130
168 Ga0207670_10056298
169 Ga0207702_10005839
170 Ga0207702_10028472
171 Ga0265337_1000020
172 Ga0265337_1001238
173 Ga0265337_1002542
174 Ga0265337_1004447
175 Ga0265337_1019504
176 Ga0265326_10050600
177 Ga0265319_1000004
178 Ga0265319_1009851
179 Ga0265334_10040240
180 Ga0265334_10059073
181 Ga0265323_10003901
182 Ga0265323_10005997
183 Ga0265323_10037059
184 Ga0265336_10002578
185 Ga0265336_10031723
186 Ga0265338_10000208
187 Ga0265338_10000533
188 Ga0265338_10001089
189 Ga0265338_10002163
190 Ga0265338_10002370
191 Ga0265338_10002459
192 Ga0265338_10004044
193 Ga0265338_10009223
194 Ga0265338_10025276
195 Ga0265338_10051408
196 Ga0265338_10080896
197 Ga0265338_10082702
198 Ga0265338_10165267
199 Ga0265338_10246401
200 Ga0265324_10000237
201 Ga0265324_10020216
202 Ga0265324_10039139
203 Ga0265324_10041242
204 Ga0265328_10011892
205 Ga0265320_10005204
206 Ga0265320_10005298
207 Ga0265320_10008230
208 Ga0265320_10017937
209 Ga0265320_10035420
210 Ga0265325_10022291
211 Ga0265329_10009751
212 Ga0265340_10002742
213 Ga0265340_10009490
214 Ga0265340_10021558
215 Ga0265339_10008976
216 Ga0265339_10116053
217 Ga0265339_10119480
218 Ga0265327_10001027
219 Ga0265316_10007288
220 Ga0265316_10016421
221 Ga0265316_10046562
222 Ga0265316_10057042
223 Ga0265316_10094323
224 Ga0265316_10106162
225 Ga0265316_10150997
226 Ga0265316_10209938
227 Ga0307513_10205651
228 Ga0265313_10001769
229 Ga0265313_10006871
230 Ga0265314_10003880
231 Ga0265314_10050759
232 Ga0265314_10079045
233 Ga0373944_0020848
234 Ga0373927_0004018
235 Ga0373937_0067877
236 Ga0373937_0258943
237 Ga0466963_0015802
238 Ga0453684_0030513
239 Ga0466970_0049649
240 Ga0451576_0051389
241 Ga0451576_0169908
242 Ga0451576_0297727
243 Ga0451576_0437231
244 Ga0495592_0190276
245 Ga0495618_0001508
246 Ga0495628_0000560
247 Ga0495628_0365848
248 Ga0495628_0388454
249 Ga0495630_0045446
250 Ga0495630_0291434
251 Ga0495640_0033426
252 Ga0495586_0003918
253 Ga0495645_0063838
254 Ga0495645_0208955
255 Ga0495622_0038306
256 Ga0495634_0004187
257 Ga0495657_0026698
258 Ga0495599_0122379
259 Ga0495613_0062022
260 Ga0495674_0253382
261 Ga0495680_0333290
262 Ga0495684_0134328
263 Ga0501032_0020083
264 Ga0501033_0001976
265 Ga0501033_0020898
266 Ga0501038_0212919
267 Ga0501038_0262945
268 Ga0501043_0171786
269 Ga0501047_0075834
270 Ga0501035_0026117
271 Ga0501035_0063665
272 Ga0501044_0000741
273 Ga0501044_0079992
274 nmdc:mga06r32_177371_c1
275 nmdc:mga08y16_742240_c1
276 2816508358

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

263

328

0.98

PF00005

ABC_tran

ABC transporter

59

212

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.943 4 255
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9352 1 258
7caf-assembly1.cif.gz_C mycobacterium smegmatis lpqy-sugabc complex in the pre-translocation state 0.933 4 256
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9291 1 256
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9284 3 265
ID Description Score Start End Superfamily
af_Q2G1F8_275_530_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9719 3 262 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9704 1 258 3.40.50.300
af_I6Y482_280_547_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9635 3 267 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9631 1 258 3.40.50.300
af_Q2FVF1_1_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9617 4 255 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A4V1SPJ0-F1-model_v4 ABC transporter ATP-binding protein 0.9779 2 260 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A4P0YB38-F1-model_v4 ABC transporter ATP-binding protein (EC 3.6.3.-) 0.9741 94 221 GO:0005524
GO:0016887
AF-A0A8A7TJ59-F1-model_v4 deleted 0.9717 4 256
AF-A0A3D6CDL7-F1-model_v4 ABC transporter ATP-binding protein 0.9708 1 259 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A4R7FR09-F1-model_v4 Peptide/nickel transport system ATP-binding protein 0.9707 1 261 GO:0005524
GO:0015833
GO:0016887
GO:0055085

Map