F172557

General Info

Members Datasets Scaffolds Average Seq Length
138 100 133 314

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100045509|Ga0068856_1000455095
Length 356
Sequence MSAEALRPPGDGTARVLVTGRLAPDVVERVEALLTAATDADGVQPLSEHVWLHLRHGGEGPDQNLLVVLTGSAASTEDGIDGEVVGYAHLDPTDPVAGPSAEVVVHPAHRGRGLGRLLVQAALEAAPGHRLRLWAHGDHPAARALAASLGFSEVRRLEQWRRSLRVPLPDVVLPPGVRLRTFRPGADDEAWLALNAAAFADHPEQGSWTLRDLHARMAEGWFDPQGFLLAETEDGPDDADGGSTGGAAPRVIGFHWTKVHGGDGHHHQGDHAGTPGVGEHGHEPIGEVYVVGVSPTQQGRGLGRALTVAGLRHLRSRGLDQAMLYVEGDNVAARAVYRALGFTWWDTDVMFLRATP

Samples

Sample ID Description Type Environment
1 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
2 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
59 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
66 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
81 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
84 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
85 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
91 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
96 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
97 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
98 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
99 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
100 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.75
Metatranscriptomes 3.62
Isolates 3.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.9
Nodule 0
Rhizoplane 5.07
Rhizosphere 87.68
Stem 0
Stem Tuber 0
Unclassified 4.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003362 3300003203 Bacteria 7534
2 JGI25406J46586_10007322 3300003203 Bacteria 5048
3 Ga0070683_100002512 3300005329 Bacteria 14615
4 Ga0070683_100199742 3300005329 Bacteria 1899
5 Ga0070689_100032905 3300005340 Bacteria 3948
6 Ga0070687_100016875 3300005343 Bacteria 3343
7 Ga0070661_100319608 3300005344 Bacteria 1212
8 Ga0070668_100378078 3300005347 Bacteria 1205
9 Ga0070669_100136214 3300005353 Unclassified 1889
10 Ga0070674_100052780 3300005356 Bacteria 2805
11 Ga0070663_100026192 3300005455 Bacteria 3946
12 Ga0070681_10065982 3300005458 Bacteria 3588
13 Ga0068867_100077456 3300005459 Unclassified 2499
14 Ga0070684_100001308 3300005535 Bacteria 17848
15 Ga0070684_100407471 3300005535 Bacteria 1254
16 Ga0070696_100010177 3300005546 Bacteria 6295
17 Ga0070664_100008255 3300005564 Bacteria 8422
18 Ga0068856_100045509 3300005614 Bacteria 4322
19 Ga0068866_10016868 3300005718 Bacteria 3274
20 Ga0068858_100095368 3300005842 Bacteria 2772
21 Ga0081540_1003138 3300005983 Bacteria 13214
22 Ga0081539_10000094 3300005985 Bacteria 206102
23 Ga0081539_10054502 3300005985 Bacteria 2232
24 Ga0070717_10071864 3300006028 Bacteria 2888
25 Ga0070717_10356858 3300006028 Bacteria 1308
26 Ga0075363_100088424 3300006048 Bacteria 1703
27 Ga0097621_100089047 3300006237 Unclassified 2580
28 Ga0068871_100263755 3300006358 Unclassified 1503
29 Ga0075428_100000501 3300006844 Bacteria 39750
30 Ga0075428_100000667 3300006844 Bacteria 35270
31 Ga0075428_100006562 3300006844 Bacteria 12937
32 Ga0075430_100001364 3300006846 Bacteria 19795
33 Ga0075430_100005439 3300006846 Bacteria 10761
34 Ga0075430_100010275 3300006846 Bacteria 7926
35 Ga0075430_100123313 3300006846 Bacteria 2160
36 Ga0075431_100003573 3300006847 Bacteria 15066
37 Ga0075431_100013507 3300006847 Bacteria 8249
38 Ga0075431_100045879 3300006847 Bacteria 4505
39 Ga0075429_100002951 3300006880 Bacteria 14430
40 Ga0075429_100003375 3300006880 Bacteria 13617
41 Ga0075429_100129241 3300006880 Bacteria 2210
42 Ga0075429_100299962 3300006880 Bacteria 1407
43 Ga0114129_10000131 3300009147 Bacteria 76741
44 Ga0114129_10000194 3300009147 Bacteria 68056
45 Ga0114129_10010163 3300009147 Bacteria 13419
46 Ga0114129_10029512 3300009147 Bacteria 7768
47 Ga0114129_10742370 3300009147 Bacteria 1257
48 Ga0114129_11052352 3300009147 Bacteria 1022
49 Ga0105243_10038164 3300009148 Bacteria 3740
50 Ga0105242_10107721 3300009176 Unclassified 2371
51 Ga0157378_10008582 3300013297 Bacteria 8893
52 Ga0157378_10061506 3300013297 Bacteria 3351
53 Ga0157379_10071595 3300014968 Bacteria 3101
54 Ga0157379_10152684 3300014968 Bacteria 2083
55 Ga0197907_10787502 3300020069 Bacteria 2735
56 Ga0206352_10019719 3300020078 Bacteria 1998
57 Ga0206350_11217633 3300020080 Bacteria 1589
58 Ga0206354_11375814 3300020081 Bacteria 1742
59 Ga0207642_10024930 3300025899 Unclassified 2412
60 Ga0207688_10048235 3300025901 Unclassified 2379
61 Ga0207652_10257768 3300025921 Bacteria 1573
62 Ga0207700_10066715 3300025928 Bacteria 2751
63 Ga0207664_10097665 3300025929 Bacteria 2420
64 Ga0207706_10167589 3300025933 Unclassified 1930
65 Ga0207686_10187215 3300025934 Unclassified 1473
66 Ga0207661_10001893 3300025944 Bacteria 14347
67 Ga0207712_10154692 3300025961 Unclassified 1775
68 Ga0207668_10365006 3300025972 Bacteria 1211
69 Ga0207678_10017566 3300026067 Bacteria 6283
70 Ga0207708_10124667 3300026075 Bacteria 2010
71 Ga0207648_10114949 3300026089 Unclassified 2365
72 Ga0207674_10024235 3300026116 Bacteria 6487
73 Ga0207675_100241111 3300026118 Unclassified 1747
74 Ga0207683_10127818 3300026121 Bacteria 2285
75 Ga0265325_10008412 3300031241 Bacteria 6093
76 Ga0265340_10017519 3300031247 Bacteria 3706
77 Ga0265340_10063785 3300031247 Bacteria 1757
78 Ga0307513_10050460 3300031456 Bacteria 4498
79 Ga0307508_10188457 3300031616 Bacteria 1664
80 Ga0316579_10001254 3300031691 Bacteria 9121
81 Ga0307410_10031423 3300031852 Bacteria 3407
82 Ga0307410_10158356 3300031852 Bacteria 1694
83 Ga0307406_10075588 3300031901 Bacteria 2223
84 Ga0307406_10092575 3300031901 Bacteria 2039
85 Ga0307406_10098595 3300031901 Bacteria 1984
86 Ga0307406_10197205 3300031901 Bacteria 1479
87 Ga0307406_10402808 3300031901 Bacteria 1085
88 Ga0307407_10005630 3300031903 Bacteria 5462
89 Ga0307409_100001950 3300031995 Bacteria 10544
90 Ga0307416_100003052 3300032002 Bacteria 9791
91 Ga0307415_100000938 3300032126 Bacteria 13386
92 Ga0307415_100027412 3300032126 Bacteria 3609
93 Ga0307415_100088650 3300032126 Bacteria 2233
94 Ga0373923_0135150 3300035111 Bacteria 1111
95 Ga0373956_0002488 3300035119 Bacteria 7499
96 Ga0372808_002203 3300036459 Bacteria 2203
97 Ga0395898_0005612 3300037466 Bacteria 13525
98 Ga0395905_0034342 3300037471 Bacteria 4762
99 Ga0395901_0007674 3300038443 Bacteria 10882
100 Ga0466963_0029442 3300044694 Bacteria 3535
101 Ga0466960_0008955 3300044901 Bacteria 4115
102 Ga0466958_0014124 3300045836 Bacteria 4556
103 Ga0466967_0019753 3300045976 Bacteria 5426
104 Ga0495629_0109534 3300046459 Bacteria 1926
105 Ga0495594_0013776 3300046499 Bacteria 4226
106 Ga0495606_0003885 3300046507 Bacteria 15405
107 Ga0495668_0000111 3300046616 Bacteria 130715
108 Ga0495625_0004275 3300046660 Bacteria 13588
109 Ga0495626_0000875 3300048091 Bacteria 26772
110 Ga0496100_0103360 3300048903 Unclassified 1967
111 Ga0496101_0019542 3300048904 Bacteria 4626
112 Ga0496105_0019146 3300048908 Bacteria 5519
113 Ga0496107_0055892 3300048910 Bacteria 2851
114 Ga0496110_0049907 3300048913 Bacteria 3673
115 Ga0496111_0058990 3300048914 Unclassified 2780
116 Ga0496114_0105712 3300048917 Bacteria 2408
117 Ga0496126_0020316 3300048929 Bacteria 6517
118 nmdc:mga03n38_115409_c1 3300050490 Bacteria 1313
119 nmdc:mga05p37_13013_c1 3300050507 Bacteria 9957
120 nmdc:mga05p37_23809_c1 3300050507 Bacteria 7436
121 nmdc:mga05p37_407_c1 3300050507 Bacteria 46625
122 nmdc:mga05p37_606_c1 3300050507 Bacteria 39578
123 nmdc:mga09592_74_c1 3300050508 Bacteria 56650
124 nmdc:mga09592_7708_c1 3300050508 Bacteria 8749
125 nmdc:mga0qj67_26_c1 3300050509 Bacteria 103914
126 nmdc:mga0qj67_3416_c1 3300050509 Bacteria 11457
127 nmdc:mga0qj67_6026_c1 3300050509 Bacteria 8880
128 nmdc:mga06r32_183577_c1 3300050510 Bacteria 2078
129 nmdc:mga06r32_194_c1 3300050510 Bacteria 36791
130 nmdc:mga06r32_97304_c1 3300050510 Bacteria 2884
131 Ga0495619_0152148 3300053085 Bacteria 1596
132 Ga0500646_0000441 3300053090 Bacteria 12323
133 Ga0500562_040945 3300053108 Bacteria 1231

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031901 Ga0307406_10402808 Ga0307406_104028081 279
2 3300031901 Ga0307406_10197205 Ga0307406_101972052 281
3 3300006028 Ga0070717_10071864 Ga0070717_100718642 285
4 3300025933 Ga0207706_10167589 Ga0207706_101675892 285
5 3300005329 Ga0070683_100002512 Ga0070683_10000251215 287
6 3300005535 Ga0070684_100001308 Ga0070684_1000013083 287
7 3300005564 Ga0070664_100008255 Ga0070664_1000082553 287
8 3300025944 Ga0207661_10001893 Ga0207661_1000189315 287
9 3300031901 Ga0307406_10075588 Ga0307406_100755882 289
10 iso_pu_bacteria 8047710418 8047716325 290
11 3300031852 Ga0307410_10158356 Ga0307410_101583562 292
12 3300031247 Ga0265340_10017519 Ga0265340_100175195 294
13 3300053108 Ga0500562_040945 Ga0500562_040945_301_1188 294
14 3300053090 Ga0500646_0000441 Ga0500646_0000441_11123_12031 295
15 iso_pu_bacteria 8056060235 8056061005 295
16 3300005546 Ga0070696_100010177 Ga0070696_1000101775 298
17 iso_pu_bacteria 2675903059 2676484975 298
18 3300006844 Ga0075428_100006562 Ga0075428_1000065629 300
19 3300006880 Ga0075429_100129241 Ga0075429_1001292411 300
20 3300036459 Ga0372808_002203 Ga0372808_002203_427_1353 300
21 3300005329 Ga0070683_100199742 Ga0070683_1001997422 301
22 3300005340 Ga0070689_100032905 Ga0070689_1000329052 301
23 3300005343 Ga0070687_100016875 Ga0070687_1000168752 301
24 3300005344 Ga0070661_100319608 Ga0070661_1003196082 301
25 3300005347 Ga0070668_100378078 Ga0070668_1003780781 301
26 3300005353 Ga0070669_100136214 Ga0070669_1001362142 301
27 3300005356 Ga0070674_100052780 Ga0070674_1000527803 301
28 3300005455 Ga0070663_100026192 Ga0070663_1000261922 301
29 3300005458 Ga0070681_10065982 Ga0070681_100659824 301
30 3300005459 Ga0068867_100077456 Ga0068867_1000774563 301
31 3300005535 Ga0070684_100407471 Ga0070684_1004074712 301
32 3300005718 Ga0068866_10016868 Ga0068866_100168682 301
33 3300005842 Ga0068858_100095368 Ga0068858_1000953683 301
34 3300006028 Ga0070717_10356858 Ga0070717_103568582 301
35 3300006237 Ga0097621_100089047 Ga0097621_1000890472 301
36 3300006358 Ga0068871_100263755 Ga0068871_1002637552 301
37 3300009148 Ga0105243_10038164 Ga0105243_100381643 301
38 3300009176 Ga0105242_10107721 Ga0105242_101077212 301
39 3300013297 Ga0157378_10008582 Ga0157378_100085828 301
40 3300013297 Ga0157378_10061506 Ga0157378_100615062 301
41 3300014968 Ga0157379_10152684 Ga0157379_101526842 301
42 3300020069 Ga0197907_10787502 Ga0197907_107875022 301
43 3300020078 Ga0206352_10019719 Ga0206352_100197192 301
44 3300020080 Ga0206350_11217633 Ga0206350_112176332 301
45 3300020081 Ga0206354_11375814 Ga0206354_113758142 301
46 3300025899 Ga0207642_10024930 Ga0207642_100249302 301
47 3300025901 Ga0207688_10048235 Ga0207688_100482352 301
48 3300025921 Ga0207652_10257768 Ga0207652_102577682 301
49 3300025928 Ga0207700_10066715 Ga0207700_100667152 301
50 3300025929 Ga0207664_10097665 Ga0207664_100976652 301
51 3300025934 Ga0207686_10187215 Ga0207686_101872152 301
52 3300025961 Ga0207712_10154692 Ga0207712_101546922 301
53 3300025972 Ga0207668_10365006 Ga0207668_103650061 301
54 3300026067 Ga0207678_10017566 Ga0207678_100175666 301
55 3300026075 Ga0207708_10124667 Ga0207708_101246672 301
56 3300026089 Ga0207648_10114949 Ga0207648_101149492 301
57 3300026116 Ga0207674_10024235 Ga0207674_100242356 301
58 3300026118 Ga0207675_100241111 Ga0207675_1002411112 301
59 3300026121 Ga0207683_10127818 Ga0207683_101278182 301
60 3300044901 Ga0466960_0008955 Ga0466960_0008955_152_1174 301
61 3300048903 Ga0496100_0103360 Ga0496100_0103360_589_1503 301
62 3300048904 Ga0496101_0019542 Ga0496101_0019542_2054_2968 301
63 3300048908 Ga0496105_0019146 Ga0496105_0019146_1527_2441 301
64 3300048910 Ga0496107_0055892 Ga0496107_0055892_53_967 301
65 3300048913 Ga0496110_0049907 Ga0496110_0049907_2559_3473 301
66 3300048914 Ga0496111_0058990 Ga0496111_0058990_1158_2072 301
67 3300048917 Ga0496114_0105712 Ga0496114_0105712_154_1068 301
68 3300048929 Ga0496126_0020316 Ga0496126_0020316_2047_2976 301
69 3300006846 Ga0075430_100001364 Ga0075430_10000136417 302
70 3300006847 Ga0075431_100013507 Ga0075431_1000135073 302
71 3300006880 Ga0075429_100299962 Ga0075429_1002999622 302
72 3300009147 Ga0114129_10029512 Ga0114129_100295122 302
73 3300050507 nmdc:mga05p37_23809_c1 nmdc:mga05p37_23809_c1_81_1019 302
74 3300050508 nmdc:mga09592_7708_c1 nmdc:mga09592_7708_c1_3773_4711 302
75 3300050509 nmdc:mga0qj67_6026_c1 nmdc:mga0qj67_6026_c1_1774_2712 302
76 3300050510 nmdc:mga06r32_97304_c1 nmdc:mga06r32_97304_c1_1095_2033 302
77 iso_pu_bacteria 2887478801 2887486546 302
78 3300006880 Ga0075429_100003375 Ga0075429_10000337512 303
79 3300046507 Ga0495606_0003885 Ga0495606_0003885_5876_6817 303
80 3300046616 Ga0495668_0000111 Ga0495668_0000111_93485_94426 303
81 3300046660 Ga0495625_0004275 Ga0495625_0004275_9721_10662 303
82 3300048091 Ga0495626_0000875 Ga0495626_0000875_19892_20833 303
83 3300031241 Ga0265325_10008412 Ga0265325_1000841210 304
84 3300009147 Ga0114129_10010163 Ga0114129_100101637 305
85 3300035119 Ga0373956_0002488 Ga0373956_0002488_2240_3412 305
86 3300050507 nmdc:mga05p37_13013_c1 nmdc:mga05p37_13013_c1_5503_6453 305
87 iso_pu_bacteria 8001781756 8001785871 305
88 3300031247 Ga0265340_10063785 Ga0265340_100637851 306
89 3300006847 Ga0075431_100045879 Ga0075431_1000458794 307
90 3300031616 Ga0307508_10188457 Ga0307508_101884571 307
91 3300045976 Ga0466967_0019753 Ga0466967_0019753_2482_3504 307
92 3300046499 Ga0495594_0013776 Ga0495594_0013776_426_1385 307
93 3300050510 nmdc:mga06r32_183577_c1 nmdc:mga06r32_183577_c1_1015_1962 307
94 3300009147 Ga0114129_11052352 Ga0114129_110523521 308
95 3300005614 Ga0068856_100045509 Ga0068856_1000455095 309
96 3300031852 Ga0307410_10031423 Ga0307410_100314233 309
97 3300031901 Ga0307406_10092575 Ga0307406_100925752 309
98 3300031901 Ga0307406_10098595 Ga0307406_100985952 309
99 3300031903 Ga0307407_10005630 Ga0307407_100056302 309
100 3300031995 Ga0307409_100001950 Ga0307409_1000019508 309
101 3300032002 Ga0307416_100003052 Ga0307416_1000030528 309
102 3300032126 Ga0307415_100000938 Ga0307415_10000093816 309
103 3300032126 Ga0307415_100027412 Ga0307415_1000274122 309
104 3300032126 Ga0307415_100088650 Ga0307415_1000886502 309
105 3300006048 Ga0075363_100088424 Ga0075363_1000884242 310
106 3300006844 Ga0075428_100000501 Ga0075428_1000005018 310
107 3300006846 Ga0075430_100010275 Ga0075430_1000102752 310
108 3300006847 Ga0075431_100003573 Ga0075431_1000035736 310
109 3300006880 Ga0075429_100002951 Ga0075429_1000029517 310
110 3300009147 Ga0114129_10000194 Ga0114129_1000019431 310
111 3300014968 Ga0157379_10071595 Ga0157379_100715951 310
112 3300035111 Ga0373923_0135150 Ga0373923_0135150_78_1025 310
113 3300046459 Ga0495629_0109534 Ga0495629_0109534_836_1783 310
114 3300050490 nmdc:mga03n38_115409_c1 nmdc:mga03n38_115409_c1_60_1049 310
115 3300050507 nmdc:mga05p37_606_c1 nmdc:mga05p37_606_c1_5410_6411 310
116 3300050508 nmdc:mga09592_74_c1 nmdc:mga09592_74_c1_35943_36944 310
117 3300050509 nmdc:mga0qj67_26_c1 nmdc:mga0qj67_26_c1_42608_43609 310
118 3300050510 nmdc:mga06r32_194_c1 nmdc:mga06r32_194_c1_11023_12024 310
119 3300053085 Ga0495619_0152148 Ga0495619_0152148_496_1443 310
120 3300003203 JGI25406J46586_10007322 JGI25406J46586_100073223 311
121 3300005985 Ga0081539_10054502 Ga0081539_100545022 311
122 3300006846 Ga0075430_100005439 Ga0075430_1000054395 311
123 3300009147 Ga0114129_10742370 Ga0114129_107423702 311
124 3300037466 Ga0395898_0005612 Ga0395898_0005612_9231_10259 311
125 3300037471 Ga0395905_0034342 Ga0395905_0034342_152_1180 311
126 3300038443 Ga0395901_0007674 Ga0395901_0007674_1251_2279 311
127 3300050509 nmdc:mga0qj67_3416_c1 nmdc:mga0qj67_3416_c1_5702_6688 311
128 3300006844 Ga0075428_100000667 Ga0075428_10000066736 312
129 3300006846 Ga0075430_100123313 Ga0075430_1001233132 312
130 3300031691 Ga0316579_10001254 Ga0316579_100012542 312
131 3300044694 Ga0466963_0029442 Ga0466963_0029442_1031_2032 312
132 3300045836 Ga0466958_0014124 Ga0466958_0014124_1702_2703 312
133 3300005983 Ga0081540_1003138 Ga0081540_10031383 313
134 3300009147 Ga0114129_10000131 Ga0114129_1000013143 313
135 3300050507 nmdc:mga05p37_407_c1 nmdc:mga05p37_407_c1_18066_19061 313
136 3300031456 Ga0307513_10050460 Ga0307513_100504603 319
137 3300003203 JGI25406J46586_10003362 JGI25406J46586_100033627 338
138 3300005985 Ga0081539_10000094 Ga0081539_10000094199 338

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08445

FR47

FR47-like protein

276

350

0.91

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

59

151

0.88

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

194

342

0.87

PF13508

Acetyltransf_7

Acetyltransferase (GNAT) domain

71

153

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c27-assembly1.cif.gz_A the structure of mycothiol synthase in complex with des- acetylmycothiol and coenzymea. 0.8864 10 329
2c27-assembly1.cif.gz_A the structure of mycothiol synthase in complex with des- acetylmycothiol and coenzymea. 0.8836 10 329
1p0h-assembly1.cif.gz_A crystal structure of rv0819 from mycobacterium tuberculosis mshd-mycothiol synthase coenzyme a complex 0.8802 9 326
3pp9-assembly1.cif.gz_A-2 1.6 angstrom resolution crystal structure of putative streptothricin acetyltransferase from bacillus anthracis str. ames in complex with acetyl coenzyme a 0.8788 52 143
2pdo-assembly1.cif.gz_A crystal structure of the putative acetyltransferase of gnat family from shigella flexneri 0.8699 182 320
ID Description Score Start End Superfamily
af_I1MRQ6_38_162_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9 232 314 3.40.630.30
1p0hA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.8802 9 326 3.40.630.30
af_O64815_14_174_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.8778 240 320 3.40.630.30
1p0hA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.8689 9 326 3.40.630.30
af_Q555H5_1389_1473_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.8665 240 292 3.40.630.30
ID Description Score Start End GO Terms
AF-A0A132NLA3-F1-model_v4 Mycothiol synthase (EC 2.3.1.189) 0.9689 67 330 GO:0008999
GO:0010125
GO:0035447
AF-A0A4R4X2Y0-F1-model_v4 Mycothiol acetyltransferase (MSH acetyltransferase) (EC 2.3.1.189) (Mycothiol synthase) 0.9471 9 337 GO:0010125
GO:0035447
AF-A0A132NLA3-F1-model_v4 Mycothiol synthase (EC 2.3.1.189) 0.9456 67 330 GO:0008999
GO:0010125
GO:0035447
AF-A0A6H1N6W5-F1-model_v4 Mycothiol acetyltransferase (MSH acetyltransferase) (EC 2.3.1.189) (Mycothiol synthase) 0.9393 39 330 GO:0010125
GO:0035447
AF-C6WPR7-F1-model_v4 Mycothiol acetyltransferase (MSH acetyltransferase) (EC 2.3.1.189) (Mycothiol synthase) 0.9329 9 327 GO:0010125
GO:0035447

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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