F171333

General Info

Members Datasets Scaffolds Average Seq Length
137 88 137 434

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_81626_c1|nmdc:mga06r32_81626_c1_287_1762
Length 491
Sequence LTGARCERLLRQSETEENSMPSGIPPGPSYPSLIQSIGFWKRPLGFLERNRARYGKRFTVRLPLTPPFVMVSDPGEIKQVFTAPPDVLHPGEGARVLEPVVGTNSVILLDEAAHLEQRKLMLPAFHGERMERLSDLISEVAEREVASWPREEPIEIAPRMQRLTLEIILRAVFGLDPGERLDGLRERLSAMLAFGDQAISLLPPPPAPIEWLLQRVGPFVGFLRLQEQADALIFDLIDERRREEDGATRGDILTLLLEARHEGGEPMSPQELRDELMTLLVAGHETTASTLAWTFERLVRLPETLERLRAEQSAGDGEAFLTATIQEALRRRPVLPNSAPRLVKQPIEVGGWEYEPGVCLVPNAYLVHHDVDVYPDPYAFRPERFLDEKPGTYTWIPFGGGRRRCLGAGFALLEMKLVIAAVLAAHDPRPASPGHEHARRRNITITPEAGSRVILSPWPATRASRNGAASSSTRSRXXSTGSAGSPMVPAQ

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
3 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
7 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
17 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
27 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
33 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
34 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
35 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
36 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
37 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
38 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
39 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
40 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
41 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
45 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
46 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
47 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
48 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
49 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
50 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
51 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
52 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
53 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
54 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
55 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
56 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
57 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
58 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
59 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
60 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
67 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
68 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
69 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
70 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
71 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
72 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
73 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
74 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
76 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
77 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
78 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
79 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
80 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
81 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
82 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
83 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
84 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
85 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
86 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
87 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
88 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.92
Nodule 0
Rhizoplane 2.19
Rhizosphere 93.43
Stem 0
Stem Tuber 0
Unclassified 1.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000070 3300001977 Bacteria 10808
2 Ga0070691_10027941 3300005341 Bacteria 2633
3 Ga0070673_100031994 3300005364 Bacteria 3955
4 Ga0070659_100171342 3300005366 Bacteria 1778
5 Ga0070711_100001399 3300005439 Bacteria 13208
6 Ga0070685_10000010 3300005466 Bacteria 146946
7 Ga0070696_100063745 3300005546 Bacteria 2582
8 Ga0081455_10007667 3300005937 Bacteria 11335
9 Ga0081455_10039407 3300005937 Bacteria 4176
10 Ga0081538_10000028 3300005981 Bacteria 124690
11 Ga0081538_10000338 3300005981 Bacteria 53185
12 Ga0081538_10001236 3300005981 Bacteria 26773
13 Ga0081538_10001459 3300005981 Bacteria 24258
14 Ga0081538_10002406 3300005981 Bacteria 18373
15 Ga0081538_10005155 3300005981 Bacteria 11841
16 Ga0081538_10009230 3300005981 Bacteria 8261
17 Ga0081538_10010619 3300005981 Bacteria 7537
18 Ga0081538_10023295 3300005981 Bacteria 4456
19 Ga0081539_10001249 3300005985 Bacteria 45085
20 Ga0070712_100088677 3300006175 Bacteria 2261
21 Ga0075367_10129590 3300006178 Bacteria 1559
22 Ga0075428_100005802 3300006844 Bacteria 13711
23 Ga0075428_100010096 3300006844 Bacteria 10488
24 Ga0075428_100050699 3300006844 Bacteria 4552
25 Ga0075428_100102142 3300006844 Bacteria 3126
26 Ga0075430_100004670 3300006846 Bacteria 11518
27 Ga0075430_100027749 3300006846 Bacteria 4809
28 Ga0075430_100085252 3300006846 Bacteria 2645
29 Ga0075430_100113519 3300006846 Bacteria 2258
30 Ga0075431_100010175 3300006847 Bacteria 9457
31 Ga0075433_10058788 3300006852 Bacteria 3363
32 Ga0075434_100104111 3300006871 Bacteria 2847
33 Ga0075429_100015582 3300006880 Bacteria 6588
34 Ga0105245_10140863 3300009098 Bacteria 2271
35 Ga0114129_10002211 3300009147 Bacteria 26822
36 Ga0114129_10009644 3300009147 Bacteria 13776
37 Ga0114129_10164569 3300009147 Bacteria 3028
38 Ga0114129_10216831 3300009147 Bacteria 2584
39 Ga0114129_10330833 3300009147 Bacteria 2023
40 Ga0114129_10568364 3300009147 Bacteria 1473
41 Ga0105238_10000014 3300009551 Bacteria 241954
42 Ga0105249_10000963 3300009553 Bacteria 25455
43 Ga0105239_10195740 3300010375 Bacteria 2264
44 Ga0163162_10020559 3300013306 Bacteria 6486
45 Ga0157375_10000884 3300013308 Bacteria 25981
46 Ga0213876_10050183 3300021384 Bacteria 2204
47 Ga0207663_10001990 3300025916 Bacteria 9701
48 Ga0207694_10000008 3300025924 Bacteria 484902
49 Ga0207706_10002594 3300025933 Bacteria 17594
50 Ga0207651_10010214 3300025960 Bacteria 5191
51 Ga0207675_100002396 3300026118 Bacteria 18565
52 Ga0307408_100092625 3300031548 Bacteria 2285
53 Ga0307405_10015738 3300031731 Bacteria 4105
54 Ga0307405_10092232 3300031731 Bacteria 2009
55 Ga0307413_10012737 3300031824 Bacteria 4196
56 Ga0307413_10014670 3300031824 Bacteria 3990
57 Ga0307410_10018528 3300031852 Bacteria 4209
58 Ga0307410_10022828 3300031852 Bacteria 3876
59 Ga0307406_10048284 3300031901 Bacteria 2687
60 Ga0307406_10176543 3300031901 Bacteria 1551
61 Ga0307412_10094062 3300031911 Bacteria 2104
62 Ga0307409_100000591 3300031995 Bacteria 15815
63 Ga0307409_100005170 3300031995 Bacteria 7459
64 Ga0307409_100127183 3300031995 Bacteria 2170
65 Ga0307416_100012145 3300032002 Bacteria 5786
66 Ga0307416_100013708 3300032002 Bacteria 5520
67 Ga0307416_100023025 3300032002 Bacteria 4511
68 Ga0307416_100026539 3300032002 Bacteria 4270
69 Ga0307411_10028332 3300032005 Bacteria 3404
70 Ga0307411_10028527 3300032005 Bacteria 3395
71 Ga0307415_100024271 3300032126 Bacteria 3782
72 Ga0307415_100108376 3300032126 Bacteria 2055
73 Ga0307415_100180924 3300032126 Bacteria 1654
74 Ga0395901_0090093 3300038443 Bacteria 3210
75 Ga0436365_1571690 3300039437 Bacteria 4058
76 Ga0466972_0039628 3300044658 Bacteria 2299
77 Ga0466957_0134448 3300044842 Bacteria 1588
78 Ga0466960_0064938 3300044901 Bacteria 1801
79 Ga0466958_0002387 3300045836 Bacteria 9401
80 Ga0466958_0002623 3300045836 Bacteria 9094
81 Ga0466958_0026489 3300045836 Bacteria 3427
82 Ga0466958_0101614 3300045836 Unclassified 1788
83 Ga0466967_0003050 3300045976 Bacteria 10748
84 Ga0495650_0000035 3300046471 Bacteria 403799
85 Ga0495596_0022999 3300046500 Bacteria 2532
86 Ga0495618_0000003 3300046514 Bacteria 256269
87 Ga0495642_0059975 3300046528 Bacteria 1578
88 Ga0495625_0000117 3300046660 Bacteria 121901
89 Ga0495657_0002892 3300046675 Bacteria 14250
90 Ga0495613_0000092 3300046689 Bacteria 86976
91 Ga0495600_0001624 3300046809 Bacteria 12542
92 Ga0496106_0164748 3300048909 Bacteria 1754
93 Ga0496108_0085925 3300048911 Bacteria 2671
94 Ga0496112_0238893 3300048915 Bacteria 1770
95 Ga0501036_0052076 3300049572 Bacteria 3467
96 Ga0501036_0221531 3300049572 Bacteria 1589
97 Ga0501036_0271394 3300049572 Bacteria 1420
98 Ga0501037_0019587 3300049573 Bacteria 4993
99 Ga0501039_0013468 3300049575 Bacteria 6255
100 Ga0501042_0048702 3300049578 Bacteria 3022
101 Ga0501042_0067782 3300049578 Bacteria 2551
102 Ga0501043_0213636 3300049579 Bacteria 1494
103 Ga0501047_0357930 3300049581 Bacteria 1295
104 Ga0501067_0126859 3300049583 Bacteria 1420
105 Ga0501069_0096813 3300049585 Bacteria 1672
106 Ga0501071_0120952 3300049587 Bacteria 1941
107 Ga0501073_0070699 3300049589 Bacteria 2431
108 Ga0501074_0024314 3300049590 Bacteria 4403
109 Ga0501076_0033825 3300049592 Bacteria 3992
110 Ga0501079_0024204 3300049741 Bacteria 4660
111 Ga0501079_0058284 3300049741 Bacteria 2980
112 Ga0501081_0117662 3300049743 Bacteria 1890
113 Ga0501044_0243464 3300049823 Bacteria 1741
114 Ga0501045_0205075 3300049824 Bacteria 1469
115 nmdc:mga05p37_10973_c1 3300050507 Bacteria 10760
116 nmdc:mga05p37_122482_c1 3300050507 Bacteria 3194
117 nmdc:mga05p37_20314_c1 3300050507 Bacteria 8036
118 nmdc:mga09592_149921_c1 3300050508 Bacteria 2012
119 nmdc:mga09592_37902_c1 3300050508 Bacteria 4045
120 nmdc:mga0qj67_106848_c1 3300050509 Bacteria 2258
121 nmdc:mga0qj67_15952_c1 3300050509 Bacteria 5689
122 nmdc:mga0qj67_44658_c1 3300050509 Bacteria 3494
123 nmdc:mga06r32_120830_c1 3300050510 Bacteria 2584
124 nmdc:mga06r32_72567_c1 3300050510 Bacteria 3333
125 nmdc:mga06r32_81626_c1 3300050510 Bacteria 3149
126 nmdc:mga08y16_102974_c1 3300050511 Bacteria 2972
127 nmdc:mga08y16_97495_c1 3300050511 Bacteria 3062
128 nmdc:mga0n895_115709_c1 3300050512 Bacteria 2700
129 nmdc:mga08x19_21740_c1 3300050514 Bacteria 3964
130 nmdc:mga0a205_239173_c1 3300050515 Bacteria 1697
131 Ga0500556_0000585 3300053104 Bacteria 24028
132 Ga0500616_0005884 3300053153 Bacteria 8205
133 Ga0500599_000365 3300053736 Bacteria 4538
134 Ga0501082_0046742 3300060353 Bacteria 3730
135 Ga0501082_0178708 3300060353 Bacteria 1845
136 Ga0530510_0008052 3300061734 Bacteria 7352
137 Ga0530510_0045341 3300061734 Bacteria 3176

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049587 Ga0501071_0120952 Ga0501071_0120952_17_1267 366
2 3300049585 Ga0501069_0096813 Ga0501069_0096813_59_1309 367
3 3300049583 Ga0501067_0126859 Ga0501067_0126859_141_1391 368
4 3300053104 Ga0500556_0000585 Ga0500556_0000585_1361_2578 371
5 3300053153 Ga0500616_0005884 Ga0500616_0005884_1339_2556 371
6 3300053736 Ga0500599_000365 Ga0500599_000365_2182_3399 371
7 3300009147 Ga0114129_10216831 Ga0114129_102168312 375
8 3300049581 Ga0501047_0357930 Ga0501047_0357930_10_1242 375
9 3300050507 nmdc:mga05p37_122482_c1 nmdc:mga05p37_122482_c1_678_1973 375
10 3300050509 nmdc:mga0qj67_44658_c1 nmdc:mga0qj67_44658_c1_875_2170 375
11 3300050508 nmdc:mga09592_149921_c1 nmdc:mga09592_149921_c1_509_1780 377
12 3300044901 Ga0466960_0064938 Ga0466960_0064938_177_1466 378
13 3300009147 Ga0114129_10568364 Ga0114129_105683641 379
14 3300046514 Ga0495618_0000003 Ga0495618_0000003_250312_251649 379
15 3300046809 Ga0495600_0001624 Ga0495600_0001624_1100_2437 379
16 3300005981 Ga0081538_10005155 Ga0081538_100051553 380
17 3300050507 nmdc:mga05p37_10973_c1 nmdc:mga05p37_10973_c1_5279_6550 380
18 3300046500 Ga0495596_0022999 Ga0495596_0022999_954_2231 382
19 3300005981 Ga0081538_10009230 Ga0081538_100092306 385
20 3300049573 Ga0501037_0019587 Ga0501037_0019587_1660_2922 385
21 3300049575 Ga0501039_0013468 Ga0501039_0013468_225_1487 385
22 3300049579 Ga0501043_0213636 Ga0501043_0213636_98_1360 385
23 3300049589 Ga0501073_0070699 Ga0501073_0070699_823_2085 385
24 3300049590 Ga0501074_0024314 Ga0501074_0024314_871_2133 385
25 3300049823 Ga0501044_0243464 Ga0501044_0243464_234_1496 385
26 3300049824 Ga0501045_0205075 Ga0501045_0205075_110_1372 385
27 3300060353 Ga0501082_0046742 Ga0501082_0046742_2364_3626 385
28 3300049572 Ga0501036_0271394 Ga0501036_0271394_35_1345 387
29 3300049572 Ga0501036_0221531 Ga0501036_0221531_289_1557 388
30 3300032005 Ga0307411_10028527 Ga0307411_100285274 390
31 3300006844 Ga0075428_100005802 Ga0075428_1000058024 392
32 3300006844 Ga0075428_100010096 Ga0075428_10001009612 392
33 3300006846 Ga0075430_100004670 Ga0075430_1000046702 392
34 3300006846 Ga0075430_100027749 Ga0075430_1000277494 392
35 3300006880 Ga0075429_100015582 Ga0075429_1000155824 392
36 3300009147 Ga0114129_10002211 Ga0114129_1000221124 392
37 3300050507 nmdc:mga05p37_20314_c1 nmdc:mga05p37_20314_c1_3850_5181 392
38 3300050508 nmdc:mga09592_37902_c1 nmdc:mga09592_37902_c1_2488_3819 392
39 3300050509 nmdc:mga0qj67_15952_c1 nmdc:mga0qj67_15952_c1_3936_5267 392
40 3300046471 Ga0495650_0000035 Ga0495650_0000035_316218_317525 393
41 3300006852 Ga0075433_10058788 Ga0075433_100587882 394
42 3300006871 Ga0075434_100104111 Ga0075434_1001041113 394
43 3300050510 nmdc:mga06r32_72567_c1 nmdc:mga06r32_72567_c1_1150_2490 394
44 3300050511 nmdc:mga08y16_97495_c1 nmdc:mga08y16_97495_c1_602_1942 394
45 3300050512 nmdc:mga0n895_115709_c1 nmdc:mga0n895_115709_c1_1189_2529 394
46 3300050514 nmdc:mga08x19_21740_c1 nmdc:mga08x19_21740_c1_2464_3804 394
47 3300050515 nmdc:mga0a205_239173_c1 nmdc:mga0a205_239173_c1_197_1537 394
48 3300005981 Ga0081538_10001459 Ga0081538_1000145925 395
49 3300009147 Ga0114129_10330833 Ga0114129_103308332 395
50 3300044842 Ga0466957_0134448 Ga0466957_0134448_160_1470 395
51 3300046528 Ga0495642_0059975 Ga0495642_0059975_216_1499 395
52 3300009551 Ga0105238_10000014 Ga0105238_1000001493 396
53 3300025924 Ga0207694_10000008 Ga0207694_10000008145 396
54 3300005366 Ga0070659_100171342 Ga0070659_1001713421 397
55 3300032126 Ga0307415_100024271 Ga0307415_1000242714 397
56 3300046675 Ga0495657_0002892 Ga0495657_0002892_4527_5864 397
57 3300005937 Ga0081455_10007667 Ga0081455_100076677 398
58 3300005981 Ga0081538_10001236 Ga0081538_1000123610 398
59 3300046660 Ga0495625_0000117 Ga0495625_0000117_24059_25393 398
60 3300049578 Ga0501042_0048702 Ga0501042_0048702_283_1575 398
61 3300049741 Ga0501079_0058284 Ga0501079_0058284_57_1349 398
62 3300050509 nmdc:mga0qj67_106848_c1 nmdc:mga0qj67_106848_c1_882_2171 398
63 3300060353 Ga0501082_0178708 Ga0501082_0178708_87_1379 398
64 3300061734 Ga0530510_0045341 Ga0530510_0045341_1459_2751 398
65 3300005981 Ga0081538_10000338 Ga0081538_1000033838 399
66 3300006178 Ga0075367_10129590 Ga0075367_101295902 399
67 3300005981 Ga0081538_10000028 Ga0081538_1000002811 402
68 3300005981 Ga0081538_10023295 Ga0081538_100232953 402
69 3300031995 Ga0307409_100005170 Ga0307409_1000051703 402
70 3300032002 Ga0307416_100023025 Ga0307416_1000230252 402
71 3300032005 Ga0307411_10028332 Ga0307411_100283322 402
72 3300046689 Ga0495613_0000092 Ga0495613_0000092_36530_37867 402
73 3300049572 Ga0501036_0052076 Ga0501036_0052076_100_1455 402
74 3300049578 Ga0501042_0067782 Ga0501042_0067782_638_1993 402
75 3300049592 Ga0501076_0033825 Ga0501076_0033825_483_1838 402
76 3300049741 Ga0501079_0024204 Ga0501079_0024204_646_2001 402
77 3300049743 Ga0501081_0117662 Ga0501081_0117662_510_1865 402
78 3300061734 Ga0530510_0008052 Ga0530510_0008052_5477_6832 402
79 3300005341 Ga0070691_10027941 Ga0070691_100279413 403
80 3300005364 Ga0070673_100031994 Ga0070673_1000319941 403
81 3300005546 Ga0070696_100063745 Ga0070696_1000637452 403
82 3300006175 Ga0070712_100088677 Ga0070712_1000886772 403
83 3300006844 Ga0075428_100050699 Ga0075428_1000506992 403
84 3300009553 Ga0105249_10000963 Ga0105249_1000096323 403
85 3300010375 Ga0105239_10195740 Ga0105239_101957402 403
86 3300013306 Ga0163162_10020559 Ga0163162_100205596 403
87 3300025933 Ga0207706_10002594 Ga0207706_1000259415 403
88 3300025960 Ga0207651_10010214 Ga0207651_100102141 403
89 3300026118 Ga0207675_100002396 Ga0207675_10000239612 403
90 3300031731 Ga0307405_10015738 Ga0307405_100157382 403
91 3300032002 Ga0307416_100013708 Ga0307416_1000137085 403
92 3300038443 Ga0395901_0090093 Ga0395901_0090093_910_2229 403
93 3300031824 Ga0307413_10012737 Ga0307413_100127372 404
94 3300031852 Ga0307410_10018528 Ga0307410_100185283 404
95 3300031901 Ga0307406_10048284 Ga0307406_100482842 404
96 3300031995 Ga0307409_100000591 Ga0307409_10000059117 404
97 3300032002 Ga0307416_100026539 Ga0307416_1000265392 404
98 3300045976 Ga0466967_0003050 Ga0466967_0003050_4174_5544 404
99 3300009098 Ga0105245_10140863 Ga0105245_101408632 405
100 3300050510 nmdc:mga06r32_120830_c1 nmdc:mga06r32_120830_c1_16_1335 405
101 3300005981 Ga0081538_10002406 Ga0081538_1000240612 406
102 3300009147 Ga0114129_10009644 Ga0114129_1000964411 406
103 3300031548 Ga0307408_100092625 Ga0307408_1000926252 406
104 3300031731 Ga0307405_10092232 Ga0307405_100922321 406
105 3300031824 Ga0307413_10014670 Ga0307413_100146702 406
106 3300031852 Ga0307410_10022828 Ga0307410_100228283 406
107 3300031901 Ga0307406_10176543 Ga0307406_101765432 406
108 3300031911 Ga0307412_10094062 Ga0307412_100940622 406
109 3300032002 Ga0307416_100012145 Ga0307416_1000121456 406
110 3300032126 Ga0307415_100108376 Ga0307415_1001083762 406
111 3300050511 nmdc:mga08y16_102974_c1 nmdc:mga08y16_102974_c1_1523_2860 406
112 3300005937 Ga0081455_10039407 Ga0081455_100394073 407
113 3300032126 Ga0307415_100180924 Ga0307415_1001809241 407
114 3300044658 Ga0466972_0039628 Ga0466972_0039628_505_1851 407
115 3300048911 Ga0496108_0085925 Ga0496108_0085925_557_1918 407
116 3300048915 Ga0496112_0238893 Ga0496112_0238893_381_1742 407
117 3300013308 Ga0157375_10000884 Ga0157375_100008842 408
118 3300009147 Ga0114129_10164569 Ga0114129_101645692 409
119 3300045836 Ga0466958_0101614 Ga0466958_0101614_348_1715 409
120 3300031995 Ga0307409_100127183 Ga0307409_1001271832 410
121 3300045836 Ga0466958_0002623 Ga0466958_0002623_6499_7911 410
122 3300005439 Ga0070711_100001399 Ga0070711_10000139911 411
123 3300006844 Ga0075428_100102142 Ga0075428_1001021422 411
124 3300006846 Ga0075430_100085252 Ga0075430_1000852522 411
125 3300006847 Ga0075431_100010175 Ga0075431_1000101752 411
126 3300021384 Ga0213876_10050183 Ga0213876_100501832 411
127 3300025916 Ga0207663_10001990 Ga0207663_1000199010 411
128 3300039437 Ga0436365_1571690 Ga0436365_1571690_1804_3168 411
129 3300045836 Ga0466958_0002387 Ga0466958_0002387_5548_6912 411
130 3300045836 Ga0466958_0026489 Ga0466958_0026489_1850_3220 411
131 3300005981 Ga0081538_10010619 Ga0081538_100106192 412
132 3300048909 Ga0496106_0164748 Ga0496106_0164748_154_1494 412
133 3300005466 Ga0070685_10000010 Ga0070685_1000001032 413
134 3300005985 Ga0081539_10001249 Ga0081539_100012497 414
135 3300006846 Ga0075430_100113519 Ga0075430_1001135192 414
136 3300050510 nmdc:mga06r32_81626_c1 nmdc:mga06r32_81626_c1_287_1762 415
137 3300001977 JGI24746J21847_1000070 JGI24746J21847_10000702 416

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00067

p450

Cytochrome P450

21

449

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4uhi-assembly1.cif.gz_A human sterol 14-alpha demethylase (cyp51) in complex with vfv in c121 space group 0.8215 14 410
1n97-assembly2.cif.gz_B crystal structure of cyp175a1 from thermus thermophillus strain hb27 0.8203 21 408
7wzl-assembly1.cif.gz_A crystal structure of cytochrome p450 184a1 from streptomyces avermitilis 0.8182 7 410
4duf-assembly4.cif.gz_D cytochrome p450 bm3h-2g9 mri sensor bound to serotonin 0.8094 8 413
7x2q-assembly2.cif.gz_B salvia miltiorrhiza cyp76ah3 0.8072 8 405
ID Description Score Start End Superfamily
af_P9WPM9_15_443_1.10.630.10 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.8799 15 406 1.10.630.10
af_P9WPM5_54_475_1.10.630.10 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.8798 17 409 1.10.630.10
af_A0A0P0W0R0_1_211_1.10.630.10 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.8755 239 412 1.10.630.10
af_P9WPN1_18_439_1.10.630.10 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.8731 19 410 1.10.630.10
af_A0A0P0XPF8_170_364_1.10.630.10 Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 0.8727 239 399 1.10.630.10
ID Description Score Start End GO Terms
AF-A0A7V9KEE8-F1-model_v4 Cytochrome P450 0.9119 249 410 GO:0004497
GO:0005506
GO:0016705
GO:0020037
AF-A0A654ZQK2-F1-model_v4 Cytochrome P450 (EC 1.14.-.-) 0.9066 257 409 GO:0004497
GO:0005506
GO:0016705
GO:0020037
AF-A0A7W1PJT8-F1-model_v4 Cytochrome P450 0.9065 254 407 GO:0004497
GO:0005506
GO:0016705
GO:0020037
AF-C4RIC9-F1-model_v4 Cytochrome P450 0.9059 18 416 GO:0004497
GO:0005506
GO:0016705
GO:0020037
AF-A0A522VF18-F1-model_v4 Cytochrome P450 0.9027 270 410 GO:0004497
GO:0005506
GO:0016705
GO:0020037

Feature Viewer

pLDDT pTM Quality
76.24 0.77 High
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Predicted Structure (AlphaFold2)

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