F170408

General Info

Members Datasets Scaffolds Average Seq Length
137 97 274 285

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100049643|Ga0307416_1000496431
Length 334
Sequence VLAATFTLVAPHLTERQRRLLFGAVARALGSGGVSRVARLAEASRPDLNKEVLDMPTVELTAGPIDYEDSGGDGPVLVFLGGVLMDGSVWDPVIADLRHDHRCIVPTLPLGAHRQPMHPQADLSLSGFARLVAELLERLDLDEVTLVQNDHGAALALAGQRPARVARLVISSCEAFENYPPGLPGRNLRLMARAPGGLLLAVQALRLRWLRRLPVTFGWMSKRPLPDELVDRWLRPAQGQRAVRRDLRKYAAGARRRDMVEICQRLAGFDRPALVVWTPEDRIQRPEHGRRLVALLPDARLIEIPDSYTLIMRDQPQAFSHAIRAFVAATPHVN

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
25 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
26 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
41 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
42 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
43 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
44 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
45 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
46 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
47 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
51 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
54 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
62 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
65 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
68 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
69 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
70 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
71 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
72 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
73 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
77 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
78 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
81 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
82 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
83 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
84 2582580736 Prauserella sp. Am3 Isolate Unclassified
85 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
86 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
87 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
88 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
89 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
90 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
91 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
92 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
93 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
94 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
95 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
96 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
97 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.78
Metatranscriptomes 0
Isolates 10.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.19
Nodule 0
Rhizoplane 7.3
Rhizosphere 76.64
Stem 0
Stem Tuber 0
Unclassified 5.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100049643 3300032002 Bacteria 3338
2 Ga0068868_100245393 3300005338 Bacteria 1506
3 Ga0070668_100000909 3300005347 Bacteria 20618
4 Ga0070669_100513538 3300005353 Bacteria 995
5 Ga0070667_100041993 3300005367 Bacteria 3836
6 Ga0070709_10000475 3300005434 Bacteria 23811
7 Ga0070713_100002507 3300005436 Bacteria 12001
8 Ga0070713_100063339 3300005436 Bacteria 3100
9 Ga0070710_10001815 3300005437 Bacteria 10079
10 Ga0070708_100003000 3300005445 Bacteria 13114
11 Ga0070708_100148679 3300005445 Bacteria 2177
12 Ga0070708_100156520 3300005445 Bacteria 2122
13 Ga0070708_100593655 3300005445 Unclassified 1044
14 Ga0070663_100000228 3300005455 Bacteria 28306
15 Ga0070706_100005535 3300005467 Bacteria 12024
16 Ga0070706_100025465 3300005467 Bacteria 5446
17 Ga0070706_100086697 3300005467 Bacteria 2901
18 Ga0070706_100180943 3300005467 Bacteria 1968
19 Ga0070707_100028634 3300005468 Bacteria 5302
20 Ga0070707_100534538 3300005468 Bacteria 1134
21 Ga0070698_100024289 3300005471 Bacteria 6324
22 Ga0070698_100026729 3300005471 Bacteria 6004
23 Ga0070698_100047605 3300005471 Bacteria 4382
24 Ga0070698_100055972 3300005471 Bacteria 3997
25 Ga0070698_100088658 3300005471 Bacteria 3078
26 Ga0070699_100024826 3300005518 Bacteria 5167
27 Ga0070699_100027181 3300005518 Bacteria 4935
28 Ga0070699_100049247 3300005518 Bacteria 3647
29 Ga0070697_100239963 3300005536 Bacteria 1547
30 Ga0070664_100060965 3300005564 Bacteria 3214
31 Ga0068858_100021809 3300005842 Bacteria 5982
32 Ga0081455_10043731 3300005937 Bacteria 3914
33 Ga0081538_10001352 3300005981 Bacteria 25238
34 Ga0081538_10008516 3300005981 Bacteria 8690
35 Ga0081538_10043986 3300005981 Bacteria 2793
36 Ga0070717_10003007 3300006028 Bacteria 12007
37 Ga0070717_10113435 3300006028 Unclassified 2314
38 Ga0070717_10358760 3300006028 Bacteria 1304
39 Ga0075365_10032490 3300006038 Bacteria 3355
40 Ga0070716_100023559 3300006173 Bacteria 3266
41 Ga0070716_100224979 3300006173 Unclassified 1263
42 Ga0070712_100199712 3300006175 Bacteria 1570
43 Ga0070712_100308946 3300006175 Bacteria 1282
44 Ga0105247_10000545 3300009101 Bacteria 30649
45 Ga0105247_10259245 3300009101 Bacteria 1191
46 Ga0213876_10071670 3300021384 Bacteria 1830
47 Ga0207653_10068415 3300025885 Bacteria 1210
48 Ga0207692_10006828 3300025898 Bacteria 4645
49 Ga0207710_10000108 3300025900 Bacteria 105251
50 Ga0207684_10001751 3300025910 Bacteria 22935
51 Ga0207684_10003054 3300025910 Bacteria 16582
52 Ga0207684_10005967 3300025910 Bacteria 11150
53 Ga0207684_10009557 3300025910 Bacteria 8554
54 Ga0207684_10016146 3300025910 Bacteria 6415
55 Ga0207684_10111136 3300025910 Bacteria 2346
56 Ga0207693_10006601 3300025915 Bacteria 9589
57 Ga0207693_10071629 3300025915 Bacteria 2713
58 Ga0207646_10010433 3300025922 Bacteria 9082
59 Ga0207646_10018369 3300025922 Bacteria 6524
60 Ga0207646_10037267 3300025922 Bacteria 4384
61 Ga0207646_10108262 3300025922 Bacteria 2493
62 Ga0207700_10027503 3300025928 Bacteria 3984
63 Ga0207664_10000122 3300025929 Bacteria 68140
64 Ga0207665_10003012 3300025939 Bacteria 11308
65 Ga0207665_10278374 3300025939 Unclassified 1244
66 Ga0207679_10229970 3300025945 Bacteria 1565
67 Ga0207658_10267629 3300025986 Bacteria 1459
68 Ga0207677_10235407 3300026023 Bacteria 1478
69 Ga0207703_10015244 3300026035 Bacteria 5996
70 Ga0207678_10000149 3300026067 Bacteria 57279
71 Ga0307515_10066364 3300028794 Bacteria 5001
72 Ga0265327_10000113 3300031251 Bacteria 175267
73 Ga0265327_10012873 3300031251 Bacteria 5603
74 Ga0307513_10091091 3300031456 Bacteria 3108
75 Ga0307508_10016097 3300031616 Bacteria 6811
76 Ga0307516_10262494 3300031730 Bacteria 1417
77 Ga0307415_100149657 3300032126 Bacteria 1795
78 Ga0307415_100472443 3300032126 Bacteria 1090
79 Ga0373960_0045494 3300035121 Bacteria 1285
80 Ga0373943_0050449 3300035170 Bacteria 2045
81 Ga0395900_0049749 3300037418 Bacteria 4319
82 Ga0395898_0453359 3300037466 Unclassified 1221
83 Ga0395905_0278406 3300037471 Bacteria 1559
84 Ga0395901_0022357 3300038443 Bacteria 6480
85 Ga0436365_0763303 3300039437 Bacteria 4540
86 Ga0436365_1715513 3300039437 Bacteria 7381
87 Ga0466969_0029436 3300044656 Bacteria 2804
88 Ga0466972_0061210 3300044658 Bacteria 1805
89 Ga0466966_0017419 3300044684 Bacteria 4747
90 Ga0466966_0268989 3300044684 Bacteria 1025
91 Ga0466971_0058960 3300044719 Bacteria 1733
92 Ga0466970_0099596 3300044765 Bacteria 1582
93 Ga0466957_0104922 3300044842 Bacteria 1786
94 Ga0466960_0084660 3300044901 Bacteria 1605
95 Ga0466959_0090324 3300045049 Bacteria 2200
96 Ga0495603_0002016 3300046455 Bacteria 11953
97 Ga0495629_0002031 3300046459 Bacteria 15733
98 Ga0495662_0001361 3300046476 Bacteria 12085
99 Ga0495665_0130918 3300046531 Bacteria 1313
100 Ga0495635_0038587 3300046663 Bacteria 3306
101 Ga0495657_0006768 3300046675 Bacteria 8936
102 Ga0495613_0000855 3300046689 Bacteria 23361
103 Ga0495613_0004025 3300046689 Bacteria 10998
104 Ga0495624_0076194 3300046690 Bacteria 2082
105 Ga0495676_0019804 3300047321 Bacteria 5914
106 Ga0495676_0234864 3300047321 Bacteria 1258
107 Ga0495679_018087 3300047446 Bacteria 2510
108 Ga0495684_0054304 3300047471 Unclassified 3056
109 Ga0495614_0000345 3300048089 Bacteria 18437
110 Ga0496100_0005267 3300048903 Bacteria 6951
111 Ga0496102_0320626 3300048905 Bacteria 1460
112 Ga0496104_0326975 3300048907 Bacteria 1446
113 Ga0496105_0012223 3300048908 Bacteria 6797
114 Ga0496111_0077970 3300048914 Bacteria 2416
115 Ga0496114_0214408 3300048917 Bacteria 1689
116 Ga0496115_0000028 3300048918 Bacteria 141457
117 Ga0496115_0000047 3300048918 Bacteria 111160
118 Ga0496115_0444377 3300048918 Unclassified 1048
119 Ga0496119_0048235 3300048922 Bacteria 2643
120 Ga0496121_0002609 3300048924 Bacteria 27233
121 Ga0496121_0039418 3300048924 Bacteria 4164
122 nmdc:mga0yw44_150769_c1 3300050492 Bacteria 1516
123 Ga0500577_0005159 3300053142 Bacteria 3499
124 2583150420 2582580736 Bacteria 5325865
125 2644016903 2643221601 Bacteria 7493239
126 2644177944 2643221631 Bacteria 8168043
127 2793980109 2791355406 Bacteria 11364898
128 2816504114 2816332139 Bacteria 9138787
129 2899368530 2899359706 Bacteria 10940472
130 2917742397 2917736166 Bacteria 9690793
131 2997605278 2997600082 Bacteria 9896405
132 8003322739 8003314358 Bacteria 10575343
133 8047898627 8047893842 Bacteria 11723082
134 8048135994 8048127548 Bacteria 11053136
135 8048360292 8048356638 Bacteria 11044339
136 8048375589 8048369669 Bacteria 11666822
137 8048382616 8048379754 Bacteria 11877923
138 Ga0307416_100049643
139 Ga0068868_100245393
140 Ga0070668_100000909
141 Ga0070669_100513538
142 Ga0070667_100041993
143 Ga0070709_10000475
144 Ga0070713_100002507
145 Ga0070713_100063339
146 Ga0070710_10001815
147 Ga0070708_100003000
148 Ga0070708_100148679
149 Ga0070708_100156520
150 Ga0070708_100593655
151 Ga0070663_100000228
152 Ga0070706_100005535
153 Ga0070706_100025465
154 Ga0070706_100086697
155 Ga0070706_100180943
156 Ga0070707_100028634
157 Ga0070707_100534538
158 Ga0070698_100024289
159 Ga0070698_100026729
160 Ga0070698_100047605
161 Ga0070698_100055972
162 Ga0070698_100088658
163 Ga0070699_100024826
164 Ga0070699_100027181
165 Ga0070699_100049247
166 Ga0070697_100239963
167 Ga0070664_100060965
168 Ga0068858_100021809
169 Ga0081455_10043731
170 Ga0081538_10001352
171 Ga0081538_10008516
172 Ga0081538_10043986
173 Ga0070717_10003007
174 Ga0070717_10113435
175 Ga0070717_10358760
176 Ga0075365_10032490
177 Ga0070716_100023559
178 Ga0070716_100224979
179 Ga0070712_100199712
180 Ga0070712_100308946
181 Ga0105247_10000545
182 Ga0105247_10259245
183 Ga0213876_10071670
184 Ga0207653_10068415
185 Ga0207692_10006828
186 Ga0207710_10000108
187 Ga0207684_10001751
188 Ga0207684_10003054
189 Ga0207684_10005967
190 Ga0207684_10009557
191 Ga0207684_10016146
192 Ga0207684_10111136
193 Ga0207693_10006601
194 Ga0207693_10071629
195 Ga0207646_10010433
196 Ga0207646_10018369
197 Ga0207646_10037267
198 Ga0207646_10108262
199 Ga0207700_10027503
200 Ga0207664_10000122
201 Ga0207665_10003012
202 Ga0207665_10278374
203 Ga0207679_10229970
204 Ga0207658_10267629
205 Ga0207677_10235407
206 Ga0207703_10015244
207 Ga0207678_10000149
208 Ga0307515_10066364
209 Ga0265327_10000113
210 Ga0265327_10012873
211 Ga0307513_10091091
212 Ga0307508_10016097
213 Ga0307516_10262494
214 Ga0307415_100149657
215 Ga0307415_100472443
216 Ga0373960_0045494
217 Ga0373943_0050449
218 Ga0395900_0049749
219 Ga0395898_0453359
220 Ga0395905_0278406
221 Ga0395901_0022357
222 Ga0436365_0763303
223 Ga0436365_1715513
224 Ga0466969_0029436
225 Ga0466972_0061210
226 Ga0466966_0017419
227 Ga0466966_0268989
228 Ga0466971_0058960
229 Ga0466970_0099596
230 Ga0466957_0104922
231 Ga0466960_0084660
232 Ga0466959_0090324
233 Ga0495603_0002016
234 Ga0495629_0002031
235 Ga0495662_0001361
236 Ga0495665_0130918
237 Ga0495635_0038587
238 Ga0495657_0006768
239 Ga0495613_0000855
240 Ga0495613_0004025
241 Ga0495624_0076194
242 Ga0495676_0019804
243 Ga0495676_0234864
244 Ga0495679_018087
245 Ga0495684_0054304
246 Ga0495614_0000345
247 Ga0496100_0005267
248 Ga0496102_0320626
249 Ga0496104_0326975
250 Ga0496105_0012223
251 Ga0496111_0077970
252 Ga0496114_0214408
253 Ga0496115_0000028
254 Ga0496115_0000047
255 Ga0496115_0444377
256 Ga0496119_0048235
257 Ga0496121_0002609
258 Ga0496121_0039418
259 nmdc:mga0yw44_150769_c1
260 Ga0500577_0005159
261 2583150420
262 2644016903
263 2644177944
264 2793980109
265 2816504114
266 2899368530
267 2917742397
268 2997605278
269 8003322739
270 8047898627
271 8048135994
272 8048360292
273 8048375589
274 8048382616

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

75

315

0.76

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

77

322

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
6u2m-assembly2.cif.gz_C crystal structure of a halotag-based calcium indicator, halocamp v2, bound to jf635 0.8493 9 131
5w15-assembly1.cif.gz_D-3 crystal structure of an alpha/beta hydrolase fold protein from burkholderia ambifaria. 0.84 12 282
7ac0-assembly1.cif.gz_EEE epoxide hydrolase coreh without ligand 0.8297 10 283
1ehy-assembly2.cif.gz_B x-ray structure of the epoxide hydrolase from agrobacterium radiobacter ad1 0.8276 9 280
8ooh-assembly1.cif.gz_A cryo-em map of the focused refinement of the subfamily iii haloalkane dehalogenase from haloferax mediterranei dimer forming hexameric assembly. 0.8237 9 286
ID Description Score Start End Superfamily
af_O53622_2_273_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9551 12 282 3.40.50.1820
af_O53622_2_273_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9449 12 282 3.40.50.1820
af_I1KVG4_94_375_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8539 11 283 3.40.50.1820
af_A0A0P0WIT7_2_163_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8486 23 132 3.40.50.1820
af_I1JME3_163_436_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8413 21 282 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A0N9HW40-F1-model_v4 Alpha/beta hydrolase 0.9909 8 286 GO:0016787
AF-A0A0N9HW40-F1-model_v4 Alpha/beta hydrolase 0.9838 8 286 GO:0016787
AF-A0A2Z4UNS0-F1-model_v4 Haloalkane dehalogenase 2 (EC 3.8.1.5) 0.975 9 286 GO:0016020
GO:0018786
AF-A0A7J5DWT8-F1-model_v4 Alpha/beta hydrolase 0.9633 1 283 GO:0016020
GO:0016787
AF-A0A535USJ1-F1-model_v4 Alpha/beta hydrolase 0.9597 1 283 GO:0016787

Map