F169998

General Info

Members Datasets Scaffolds Average Seq Length
137 79 137 923

Family's Representative Sequence

Representative Sequence 3300025914|Ga0207671_10001902|Ga0207671_100019024
Length 969
Sequence MTSKKHEHLKKNHLLNVSNKALKISITGIASFLMLTGSLTAQRLAQSPAAQPVRQVQLSQFELQSSAIVGSDGAALSAPAWQPRNYWYPVAVPSTVLTGLVANKVYPDPYTGMNNMLIPDASDTFNLQYHLDQYSHLPGEPNPWKKPYWYRTTFSVPAGDKGRHFQLIFKGINYRADVWLNGQLIADSSRMVGMFEEFYLDADKAIRAGEKNALAVKIYPLDYPGLPAEPQLKAMDDFFENGGPTGDIGKNVTMLCSIGWDWIPEVRDRNMGIWQPVYLRTTGRVVIAHPRIITELPDTSVAKLALDLDLNNFTNTARKGRLTVTISPENFNGSAITFSKDLSAVSSITSFGNSTGSTTRISLSTADIPALTIRHPHLWWPNGYGNPDLYRIRLRFTDQAGVSDDTSFVFGIRTVSSSATMVNGYVRRDFYVNGRRVNLVGGAWVPDMMLNRDRQRYDYELRLCRNANVNLVRIWGGGLGETDDFYELADRNGLLVWQDFWITGDTNGGFKGSADWPLQSTVFIDNVISTILRIRNHPSLLVWTGGNEGHARKELYDAMRDNVAMLDGTRPFIPCSSGFSKAPADWKGSWPDDKLSGVYSGGPYSWQDEVNYFRFVDEGKGWVFKDETGIPSQPPYNTLSKIIPNLSPDSSLPFPLNNSWGYHDACTGNGKYDTYYKAMVDRYGQPQSVRDFSEKMQLITADGYRAIFEAAGHKLRETGGVMLWKLNAAFPSVAWQVYDWYLEPNAGYYFMQRACDPIHIQLNRDDSSVALVNRTYQSRKGLRYVAELLNIDGRSLYKKEGHASLDTTEARSVLSLTDELRKEKGISFLILTLYDAGGILQSRNTYWLSPGHDFSALRQMPAATLIVKARALLPASAPTANFPPAEYSTWTVTIKNTSKQLAFFLNPQLIRDGEEVLPSYWTDNYFSIPPGETATTTVSCPKTLIKGTAPELRLEGWNTPRQTIPLVTR

Samples

Sample ID Description Type Environment
1 2914759650 Rhizosphaericola mali Isolate Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
36 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
37 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
38 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
39 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
57 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
58 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
64 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
65 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
68 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
69 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
70 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
71 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
72 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
73 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
74 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
75 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
76 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
77 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
78 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
79 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.54
Metatranscriptomes 0.73
Isolates 0.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.92
Nodule 0
Rhizoplane 0
Rhizosphere 89.05
Stem 0
Stem Tuber 0
Unclassified 8.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10000753 3300003316 Bacteria 32397
2 rootH1_10015346 3300003316 Bacteria 8043
3 rootH1_10015346 3300003323 Bacteria 2240
4 rootH2_10005170 3300003320 Bacteria 79894
5 rootH2_10031448 3300003320 Bacteria 32925
6 rootH1_10099845 3300003323 Bacteria 6299
7 rootH1_10144654 3300003323 Bacteria 5159
8 rootH1_10173291 3300003323 Bacteria 7840
9 Ga0058863_11619632 3300004799 Bacteria 4055
10 Ga0070680_100007069 3300005336 Bacteria 8556
11 Ga0068868_100031449 3300005338 Bacteria 4077
12 Ga0070671_100013432 3300005355 Bacteria 6602
13 Ga0070673_100011068 3300005364 Bacteria 6147
14 Ga0070681_10006619 3300005458 Bacteria 11283
15 Ga0070681_10007024 3300005458 Bacteria 10962
16 Ga0068867_100012682 3300005459 Bacteria 5961
17 Ga0070684_100006857 3300005535 Bacteria 8839
18 Ga0068853_100001498 3300005539 Bacteria 16965
19 Ga0070665_100000047 3300005548 Bacteria 269702
20 Ga0068855_100000041 3300005563 Bacteria 151653
21 Ga0068855_100000218 3300005563 Bacteria 73075
22 Ga0068855_100008174 3300005563 Bacteria 12650
23 Ga0068855_100012874 3300005563 Bacteria 10092
24 Ga0068855_100018247 3300005563 Bacteria 8428
25 Ga0068857_100001156 3300005577 Bacteria 20612
26 Ga0068856_100010880 3300005614 Bacteria 8831
27 Ga0068856_100081850 3300005614 Unclassified 3204
28 Ga0068852_100000884 3300005616 Bacteria 19821
29 Ga0068860_100000003 3300005843 Bacteria 575741
30 Ga0068860_100004965 3300005843 Bacteria 13559
31 Ga0068860_100040186 3300005843 Bacteria 4472
32 Ga0068862_100035075 3300005844 Bacteria 4247
33 Ga0097621_100011053 3300006237 Bacteria 6636
34 Ga0068871_100000691 3300006358 Bacteria 22974
35 Ga0068865_100000178 3300006881 Bacteria 35174
36 Ga0105240_10000103 3300009093 Bacteria 172981
37 Ga0105240_10000356 3300009093 Bacteria 85978
38 Ga0105240_10000383 3300009093 Bacteria 83057
39 Ga0105240_10000401 3300009093 Bacteria 80500
40 Ga0105240_10003676 3300009093 Bacteria 23733
41 Ga0105240_10017322 3300009093 Bacteria 9713
42 Ga0105240_10037219 3300009093 Bacteria 6254
43 Ga0105241_10007117 3300009174 Bacteria 8236
44 Ga0105237_10000323 3300009545 Bacteria 67328
45 Ga0105237_10002815 3300009545 Bacteria 21136
46 Ga0105237_10005715 3300009545 Bacteria 13983
47 Ga0105237_10021822 3300009545 Bacteria 6577
48 Ga0105237_10028294 3300009545 Bacteria 5710
49 Ga0105238_10000986 3300009551 Bacteria 29095
50 Ga0105238_10002681 3300009551 Bacteria 17698
51 Ga0105238_10003670 3300009551 Bacteria 15291
52 Ga0105238_10028636 3300009551 Bacteria 5674
53 Ga0105239_10000017 3300010375 Bacteria 290760
54 Ga0105239_10000683 3300010375 Bacteria 48374
55 Ga0105239_10001111 3300010375 Bacteria 37117
56 Ga0157373_10000018 3300013100 Bacteria 169293
57 Ga0157373_10007261 3300013100 Bacteria 8260
58 Ga0157370_10001208 3300013104 Bacteria 32283
59 Ga0157370_10002477 3300013104 Bacteria 22268
60 Ga0157374_10000027 3300013296 Bacteria 233444
61 Ga0157374_10011779 3300013296 Bacteria 7586
62 Ga0163162_10001406 3300013306 Bacteria 22404
63 Ga0157372_10001911 3300013307 Bacteria 22615
64 Ga0157372_10014678 3300013307 Bacteria 8383
65 Ga0157375_10022150 3300013308 Bacteria 5845
66 Ga0207427_100138 3300025231 Bacteria 86499
67 Ga0209437_100010 3300025233 Bacteria 838447
68 Ga0209026_1000964 3300025250 Bacteria 14358
69 Ga0209233_1000017 3300025261 Bacteria 898076
70 Ga0207645_10003062 3300025907 Bacteria 12835
71 Ga0207695_10000019 3300025913 Bacteria 732137
72 Ga0207695_10000209 3300025913 Bacteria 157802
73 Ga0207695_10000300 3300025913 Bacteria 122104
74 Ga0207695_10000365 3300025913 Bacteria 103398
75 Ga0207695_10020349 3300025913 Bacteria 7605
76 Ga0207671_10001902 3300025914 Bacteria 23210
77 Ga0207671_10002811 3300025914 Bacteria 18113
78 Ga0207671_10014889 3300025914 Bacteria 6118
79 Ga0207652_10000180 3300025921 Bacteria 66974
80 Ga0207652_10006884 3300025921 Bacteria 9159
81 Ga0207644_10005552 3300025931 Bacteria 8207
82 Ga0207704_10000114 3300025938 Bacteria 44748
83 Ga0207667_10000263 3300025949 Bacteria 73089
84 Ga0207667_10000404 3300025949 Bacteria 58450
85 Ga0207667_10000902 3300025949 Bacteria 37879
86 Ga0207667_10012770 3300025949 Bacteria 9647
87 Ga0207651_10001798 3300025960 Bacteria 9967
88 Ga0207677_10029848 3300026023 Bacteria 3472
89 Ga0207639_10008002 3300026041 Bacteria 7222
90 Ga0207702_10000455 3300026078 Bacteria 46164
91 Ga0207648_10002063 3300026089 Bacteria 21897
92 Ga0207674_10006016 3300026116 Bacteria 14350
93 Ga0207683_10015886 3300026121 Bacteria 6411
94 Ga0207698_10001281 3300026142 Bacteria 14671
95 Ga0207698_10024226 3300026142 Bacteria 4256
96 Ga0268266_10000104 3300028379 Bacteria 178320
97 Ga0268264_10000028 3300028381 Bacteria 426662
98 Ga0268264_10007061 3300028381 Bacteria 9414
99 Ga0307517_10003352 3300028786 Bacteria 24924
100 Ga0307517_10025861 3300028786 Bacteria 7149
101 Ga0307510_10016025 3300033180 Bacteria 8851
102 Ga0395899_0002270 3300037312 Bacteria 15714
103 Ga0395899_0007166 3300037312 Bacteria 8632
104 Ga0395900_0000370 3300037418 Bacteria 64745
105 Ga0395898_0011663 3300037466 Bacteria 9116
106 Ga0395905_0000529 3300037471 Bacteria 52320
107 Ga0395901_0000580 3300038443 Bacteria 42442
108 Ga0439448_0004581 3300042005 Bacteria 3907
109 Ga0451577_0000140 3300042876 Bacteria 161646
110 Ga0451577_0007713 3300042876 Bacteria 10551
111 Ga0451577_0009250 3300042876 Bacteria 9498
112 Ga0451577_0018383 3300042876 Bacteria 6440
113 Ga0451577_0027130 3300042876 Bacteria 5184
114 Ga0453683_0000445 3300044673 Bacteria 47576
115 Ga0453683_0000874 3300044673 Bacteria 28989
116 Ga0453683_0002803 3300044673 Bacteria 13258
117 Ga0453684_0000084 3300044712 Bacteria 398306
118 Ga0453684_0000143 3300044712 Bacteria 315998
119 Ga0453684_0000626 3300044712 Bacteria 128697
120 Ga0453684_0012280 3300044712 Bacteria 14182
121 Ga0453684_0025124 3300044712 Bacteria 8665
122 Ga0451576_0000176 3300045051 Bacteria 161951
123 Ga0451576_0010704 3300045051 Bacteria 10503
124 Ga0451576_0016524 3300045051 Bacteria 8139
125 Ga0495638_0024668 3300046460 Bacteria 3916
126 Ga0495650_0000127 3300046471 Bacteria 177276
127 Ga0495606_0002459 3300046507 Bacteria 21479
128 Ga0495606_0015879 3300046507 Bacteria 5778
129 Ga0495648_0005305 3300046524 Bacteria 10750
130 Ga0495633_0000267 3300046558 Bacteria 61184
131 Ga0495625_0000048 3300046660 Bacteria 198976
132 Ga0495649_0000377 3300046694 Bacteria 38650
133 Ga0495687_001084 3300047443 Bacteria 26743
134 Ga0495686_0000005 3300047472 Bacteria 827143
135 Ga0501069_0008282 3300049585 Bacteria 5460
136 Ga0501079_0055510 3300049741 Unclassified 3057
137 Ga0500608_001641 3300053122 Bacteria 8041

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300004799 Ga0058863_11619632 Ga0058863_116196322 821
2 3300005458 Ga0070681_10006619 Ga0070681_100066195 821
3 3300013306 Ga0163162_10001406 Ga0163162_100014063 834
4 iso_pu_bacteria 2914759650 2914763459 878
5 3300026078 Ga0207702_10000455 Ga0207702_1000045515 888
6 3300025913 Ga0207695_10000019 Ga0207695_10000019554 901
7 3300025914 Ga0207671_10002811 Ga0207671_1000281112 901
8 3300047472 Ga0495686_0000005 Ga0495686_0000005_805030_807759 906
9 3300009093 Ga0105240_10003676 Ga0105240_100036764 908
10 3300009545 Ga0105237_10021822 Ga0105237_100218221 908
11 3300025913 Ga0207695_10020349 Ga0207695_100203494 908
12 3300005614 Ga0068856_100010880 Ga0068856_1000108804 910
13 3300010375 Ga0105239_10000017 Ga0105239_1000001754 910
14 3300025231 Ga0207427_100138 Ga0207427_10013857 910
15 3300025233 Ga0209437_100010 Ga0209437_10001044 910
16 3300025261 Ga0209233_1000017 Ga0209233_100001757 910
17 3300003323 rootH1_10099845 rootH1_100998453 911
18 3300003323 rootH1_10144654 rootH1_101446543 911
19 3300005563 Ga0068855_100000041 Ga0068855_10000004149 911
20 3300005563 Ga0068855_100000218 Ga0068855_1000002187 911
21 3300025949 Ga0207667_10000263 Ga0207667_100002637 911
22 3300025949 Ga0207667_10000404 Ga0207667_1000040447 911
23 3300005539 Ga0068853_100001498 Ga0068853_1000014989 912
24 3300009093 Ga0105240_10037219 Ga0105240_100372191 912
25 3300026041 Ga0207639_10008002 Ga0207639_100080023 912
26 3300046507 Ga0495606_0015879 Ga0495606_0015879_520_3315 913
27 3300042876 Ga0451577_0000140 Ga0451577_0000140_152905_155682 914
28 3300044712 Ga0453684_0000084 Ga0453684_0000084_127034_129811 914
29 3300045051 Ga0451576_0000176 Ga0451576_0000176_126524_129301 914
30 3300003320 rootH2_10031448 rootH2_100314482 916
31 3300009093 Ga0105240_10000103 Ga0105240_1000010333 916
32 3300009545 Ga0105237_10005715 Ga0105237_100057153 916
33 3300010375 Ga0105239_10001111 Ga0105239_100011113 916
34 3300042876 Ga0451577_0007713 Ga0451577_0007713_50_2803 916
35 3300042876 Ga0451577_0009250 Ga0451577_0009250_6188_8944 916
36 3300044712 Ga0453684_0000143 Ga0453684_0000143_128371_131169 916
37 3300044712 Ga0453684_0000626 Ga0453684_0000626_77331_80087 916
38 3300044712 Ga0453684_0025124 Ga0453684_0025124_3170_5923 916
39 3300045051 Ga0451576_0010704 Ga0451576_0010704_3812_6568 916
40 3300009551 Ga0105238_10003670 Ga0105238_100036705 917
41 3300044673 Ga0453683_0002803 Ga0453683_0002803_2075_4888 917
42 3300005843 Ga0068860_100040186 Ga0068860_1000401863 918
43 3300009093 Ga0105240_10017322 Ga0105240_100173223 918
44 3300009545 Ga0105237_10000323 Ga0105237_1000032311 918
45 3300003316 rootH1_10015346 rootH1_100153462 919
46 3300003320 rootH2_10005170 rootH2_1000517013 919
47 3300005563 Ga0068855_100008174 Ga0068855_1000081747 919
48 3300005577 Ga0068857_100001156 Ga0068857_10000115617 919
49 3300005616 Ga0068852_100000884 Ga0068852_1000008845 919
50 3300009093 Ga0105240_10000383 Ga0105240_1000038335 919
51 3300009093 Ga0105240_10000401 Ga0105240_1000040156 919
52 3300009174 Ga0105241_10007117 Ga0105241_100071173 919
53 3300009545 Ga0105237_10028294 Ga0105237_100282943 919
54 3300009551 Ga0105238_10000986 Ga0105238_100009867 919
55 3300009551 Ga0105238_10002681 Ga0105238_100026819 919
56 3300010375 Ga0105239_10000683 Ga0105239_1000068317 919
57 3300013307 Ga0157372_10001911 Ga0157372_1000191117 919
58 3300025913 Ga0207695_10000300 Ga0207695_1000030039 919
59 3300025913 Ga0207695_10000365 Ga0207695_1000036560 919
60 3300025914 Ga0207671_10014889 Ga0207671_100148893 919
61 3300025949 Ga0207667_10000902 Ga0207667_1000090214 919
62 3300026116 Ga0207674_10006016 Ga0207674_100060166 919
63 3300026142 Ga0207698_10001281 Ga0207698_100012818 919
64 3300009093 Ga0105240_10000356 Ga0105240_1000035645 920
65 3300013296 Ga0157374_10000027 Ga0157374_10000027152 920
66 3300025913 Ga0207695_10000209 Ga0207695_1000020945 920
67 3300005548 Ga0070665_100000047 Ga0070665_100000047152 921
68 3300005843 Ga0068860_100000003 Ga0068860_100000003438 921
69 3300028379 Ga0268266_10000104 Ga0268266_1000010492 921
70 3300028381 Ga0268264_10000028 Ga0268264_1000002882 921
71 3300046524 Ga0495648_0005305 Ga0495648_0005305_1001_3787 921
72 3300046558 Ga0495633_0000267 Ga0495633_0000267_19042_21846 921
73 3300003323 rootH1_10173291 rootH1_101732914 922
74 3300005535 Ga0070684_100006857 Ga0070684_1000068573 922
75 3300013100 Ga0157373_10000018 Ga0157373_1000001869 922
76 3300013307 Ga0157372_10014678 Ga0157372_100146783 922
77 3300025250 Ga0209026_1000964 Ga0209026_10009642 922
78 3300046507 Ga0495606_0002459 Ga0495606_0002459_9817_12663 922
79 3300049585 Ga0501069_0008282 Ga0501069_0008282_1018_3807 922
80 3300049741 Ga0501079_0055510 Ga0501079_0055510_176_2965 922
81 3300025914 Ga0207671_10001902 Ga0207671_100019024 923
82 3300044673 Ga0453683_0000445 Ga0453683_0000445_25920_28700 923
83 3300044673 Ga0453683_0000874 Ga0453683_0000874_17450_20227 923
84 3300045051 Ga0451576_0016524 Ga0451576_0016524_188_2968 923
85 3300046460 Ga0495638_0024668 Ga0495638_0024668_771_3551 923
86 3300033180 Ga0307510_10016025 Ga0307510_100160254 924
87 3300042876 Ga0451577_0027130 Ga0451577_0027130_486_3263 924
88 3300005336 Ga0070680_100007069 Ga0070680_1000070695 925
89 3300005338 Ga0068868_100031449 Ga0068868_1000314493 925
90 3300005364 Ga0070673_100011068 Ga0070673_1000110684 925
91 3300005458 Ga0070681_10007024 Ga0070681_100070246 925
92 3300005459 Ga0068867_100012682 Ga0068867_1000126824 925
93 3300005614 Ga0068856_100081850 Ga0068856_1000818502 925
94 3300006237 Ga0097621_100011053 Ga0097621_1000110531 925
95 3300006358 Ga0068871_100000691 Ga0068871_10000069115 925
96 3300006881 Ga0068865_100000178 Ga0068865_10000017829 925
97 3300009545 Ga0105237_10002815 Ga0105237_1000281513 925
98 3300009551 Ga0105238_10028636 Ga0105238_100286363 925
99 3300013104 Ga0157370_10001208 Ga0157370_100012085 925
100 3300013296 Ga0157374_10011779 Ga0157374_100117794 925
101 3300025907 Ga0207645_10003062 Ga0207645_100030623 925
102 3300025921 Ga0207652_10000180 Ga0207652_1000018054 925
103 3300025938 Ga0207704_10000114 Ga0207704_100001144 925
104 3300025949 Ga0207667_10012770 Ga0207667_100127706 925
105 3300025960 Ga0207651_10001798 Ga0207651_100017984 925
106 3300026023 Ga0207677_10029848 Ga0207677_100298482 925
107 3300026089 Ga0207648_10002063 Ga0207648_100020634 925
108 3300026121 Ga0207683_10015886 Ga0207683_100158861 925
109 3300026142 Ga0207698_10024226 Ga0207698_100242262 925
110 3300037312 Ga0395899_0002270 Ga0395899_0002270_1345_4137 925
111 3300037418 Ga0395900_0000370 Ga0395900_0000370_3950_6742 925
112 3300037466 Ga0395898_0011663 Ga0395898_0011663_3707_6499 925
113 3300037471 Ga0395905_0000529 Ga0395905_0000529_45809_48601 925
114 3300038443 Ga0395901_0000580 Ga0395901_0000580_3720_6512 925
115 3300042005 Ga0439448_0004581 Ga0439448_0004581_971_3763 925
116 3300005355 Ga0070671_100013432 Ga0070671_1000134323 926
117 3300005843 Ga0068860_100004965 Ga0068860_10000496511 926
118 3300005844 Ga0068862_100035075 Ga0068862_1000350752 926
119 3300013308 Ga0157375_10022150 Ga0157375_100221502 926
120 3300025931 Ga0207644_10005552 Ga0207644_100055525 926
121 3300028381 Ga0268264_10007061 Ga0268264_100070612 926
122 3300028786 Ga0307517_10025861 Ga0307517_100258614 926
123 3300037312 Ga0395899_0007166 Ga0395899_0007166_4203_6986 926
124 3300042876 Ga0451577_0018383 Ga0451577_0018383_3454_6237 926
125 3300044712 Ga0453684_0012280 Ga0453684_0012280_3230_6013 926
126 3300047443 Ga0495687_001084 Ga0495687_001084_1946_4741 926
127 3300053122 Ga0500608_001641 Ga0500608_001641_3164_5959 926
128 3300005563 Ga0068855_100012874 Ga0068855_1000128742 927
129 3300005563 Ga0068855_100018247 Ga0068855_1000182475 927
130 3300013100 Ga0157373_10007261 Ga0157373_100072612 927
131 3300013104 Ga0157370_10002477 Ga0157370_100024772 927
132 3300025921 Ga0207652_10006884 Ga0207652_100068842 927
133 3300028786 Ga0307517_10003352 Ga0307517_100033528 927
134 3300003316 rootH1_10000753 rootH1_1000075311 929
135 3300046471 Ga0495650_0000127 Ga0495650_0000127_89678_92467 929
136 3300046660 Ga0495625_0000048 Ga0495625_0000048_186206_188995 929
137 3300046694 Ga0495649_0000377 Ga0495649_0000377_9980_12769 929

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18368

Ig_GlcNase

Exo-beta-D-glucosaminidase Ig-fold domain

844

959

0.9

PF00703

Glyco_hydro_2

Glycosyl hydrolases family 2

285

413

0.85

PF02836

Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

429

585

0.82

PF22666

Glyco_hydro_2_N2

Glycosyl hydrolase 2 galactose-binding domain-like

132

275

0.81

PF02837

Glyco_hydro_2_N

Glycosyl hydrolases family 2, sugar binding domain

121

249

0.78

PF13364

BetaGal_ABD2

Beta-galactosidase second all-beta domain

110

222

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vzo-assembly1.cif.gz_A crystal structure of amycolatopsis orientalis exo-chitosanase csxa 0.8323 29 925
2vzo-assembly1.cif.gz_A crystal structure of amycolatopsis orientalis exo-chitosanase csxa 0.8295 29 925
2x09-assembly2.cif.gz_B inhibition of the exo-beta-d-glucosaminidase csxa by a glucosamine- configured castanospermine and an amino-australine analogue 0.8284 29 925
2x09-assembly2.cif.gz_B inhibition of the exo-beta-d-glucosaminidase csxa by a glucosamine- configured castanospermine and an amino-australine analogue 0.8256 29 925
2vzv-assembly2.cif.gz_B substrate complex of amycolatopsis orientalis exo-chitosanase csxa e541a with chitosan 0.8186 25 925
ID Description Score Start End Superfamily
af_I1LBC5_694_798_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9248 725 817 2.60.40.10
2vzoA05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9243 829 927 2.60.40.10
2vzoB04 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9203 725 819 2.60.40.10
af_I1NIZ2_693_808_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.9194 725 828 2.60.40.10
2vzoA05 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.89 829 927 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A522F1W2-F1-model_v4 Beta-mannosidase 0.955 255 927 GO:0004553
GO:0005975
AF-A0A522F1W2-F1-model_v4 Beta-mannosidase 0.9494 255 927 GO:0004553
GO:0005975
AF-A0A4Q4DI77-F1-model_v4 Glycosyl hydrolase 0.9472 825 925 GO:0004553
GO:0005975
AF-A0A5C1IHY6-F1-model_v4 deleted 0.9346 575 927
AF-A0A1F3NPW1-F1-model_v4 Exo-1,4-beta-D-glucosaminidase 0.9318 29 925 GO:0004553
GO:0005975

Feature Viewer

pLDDT pTM Quality
78.88 0.83 High
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Predicted Structure (AlphaFold2)

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