F169333

General Info

Members Datasets Scaffolds Average Seq Length
137 98 137 200

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10000803|Ga0081538_1000080315
Length 235
Sequence MRLPNTAHTSRPWRIHELTGDFRLEDVWALPTPGGSDDFPRLVEGIASSEPSQSSSRAARTLWAIRWKIGELLGWDGPDGVHGWRRPTLRDRLPVDLREGPSGPDFERAPFTSVYLLEDEWAAEIVNRTVHGVMHIGWVPDQTGGYRGEMAVYVKPNGLLGAVYMATIRPFRHLIVYPSLMREIGREWRARDAEPTPTHAQPEVLAYGSRISSRHGPSPTIGWVRPSSQSTWRSS

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
48 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
49 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
50 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
51 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
56 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
64 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
65 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
66 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
67 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
68 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
69 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
70 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
71 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
72 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
82 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
83 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
84 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
88 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
89 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
96 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
97 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
98 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.11
Nodule 0
Rhizoplane 2.92
Rhizosphere 91.97
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10016797 3300003373 Bacteria 1897
2 Ga0070666_10235212 3300005335 Bacteria 1294
3 Ga0070668_100355022 3300005347 Bacteria 1242
4 Ga0070667_100645720 3300005367 Bacteria 977
5 Ga0070714_100087667 3300005435 Bacteria 2722
6 Ga0070708_100018865 3300005445 Bacteria 5779
7 Ga0070708_100037710 3300005445 Bacteria 4219
8 Ga0070708_100549415 3300005445 Bacteria 1089
9 Ga0070706_100003949 3300005467 Bacteria 14440
10 Ga0070706_100323290 3300005467 Bacteria 1438
11 Ga0070707_100000368 3300005468 Bacteria 44585
12 Ga0070707_100035270 3300005468 Bacteria 4772
13 Ga0070707_100099078 3300005468 Bacteria 2823
14 Ga0070707_100735468 3300005468 Bacteria 950
15 Ga0070698_100056520 3300005471 Bacteria 3976
16 Ga0070698_100372070 3300005471 Bacteria 1361
17 Ga0070699_100017236 3300005518 Bacteria 6203
18 Ga0070699_100163051 3300005518 Bacteria 1973
19 Ga0070699_100250236 3300005518 Bacteria 1583
20 Ga0070697_100764797 3300005536 Bacteria 854
21 Ga0068853_100060982 3300005539 Bacteria 3261
22 Ga0068856_100000577 3300005614 Bacteria 40018
23 Ga0068870_10201241 3300005840 Bacteria 1208
24 Ga0081455_10020386 3300005937 Bacteria 6243
25 Ga0081455_10244438 3300005937 Bacteria 1317
26 Ga0081538_10000803 3300005981 Bacteria 34049
27 Ga0081538_10001646 3300005981 Bacteria 22909
28 Ga0081540_1000986 3300005983 Bacteria 25652
29 Ga0081539_10134920 3300005985 Bacteria 1207
30 Ga0075363_100001707 3300006048 Bacteria 8533
31 Ga0075364_10009712 3300006051 Bacteria 5784
32 Ga0075369_10155770 3300006186 Bacteria 1046
33 Ga0075370_10039460 3300006353 Bacteria 2660
34 Ga0075428_100005274 3300006844 Bacteria 14375
35 Ga0075430_100547756 3300006846 Bacteria 954
36 Ga0075431_100358721 3300006847 Bacteria 1465
37 Ga0075434_100371192 3300006871 Bacteria 1452
38 Ga0075429_100418751 3300006880 Bacteria 1173
39 Ga0068865_100000160 3300006881 Bacteria 36781
40 Ga0111539_10054703 3300009094 Bacteria 4747
41 Ga0111539_10209672 3300009094 Bacteria 2270
42 Ga0114129_10001814 3300009147 Bacteria 29120
43 Ga0114129_10470056 3300009147 Bacteria 1647
44 Ga0157370_10022615 3300013104 Bacteria 6255
45 Ga0157374_10236534 3300013296 Bacteria 1795
46 Ga0157372_10177943 3300013307 Bacteria 2462
47 Ga0163163_10279444 3300014325 Unclassified 1721
48 Ga0207680_10243597 3300025903 Bacteria 1240
49 Ga0207684_10041205 3300025910 Bacteria 3916
50 Ga0207684_10211106 3300025910 Bacteria 1675
51 Ga0207684_10290865 3300025910 Bacteria 1409
52 Ga0207684_10547114 3300025910 Bacteria 990
53 Ga0207646_10002107 3300025922 Bacteria 23851
54 Ga0207646_10084174 3300025922 Bacteria 2845
55 Ga0207646_10182363 3300025922 Bacteria 1896
56 Ga0207664_10101664 3300025929 Bacteria 2376
57 Ga0207704_10000236 3300025938 Bacteria 27317
58 Ga0207668_10442099 3300025972 Bacteria 1108
59 Ga0207639_10051999 3300026041 Bacteria 3119
60 Ga0207702_10000060 3300026078 Bacteria 125473
61 Ga0207428_10205557 3300027907 Bacteria 1481
62 Ga0265322_10029070 3300028654 Bacteria 1579
63 Ga0265338_10095715 3300028800 Bacteria 2438
64 Ga0307408_100260756 3300031548 Bacteria 1434
65 Ga0307408_100615109 3300031548 Bacteria 967
66 Ga0307405_10137004 3300031731 Bacteria 1701
67 Ga0307405_10341742 3300031731 Bacteria 1151
68 Ga0307413_10056728 3300031824 Bacteria 2391
69 Ga0307410_10390381 3300031852 Bacteria 1122
70 Ga0307410_10650036 3300031852 Bacteria 884
71 Ga0307406_10086749 3300031901 Bacteria 2097
72 Ga0307406_11039147 3300031901 Bacteria 705
73 Ga0307407_10528479 3300031903 Bacteria 869
74 Ga0307412_10222156 3300031911 Bacteria 1449
75 Ga0307409_100125600 3300031995 Bacteria 2181
76 Ga0307409_100436603 3300031995 Bacteria 1260
77 Ga0307416_100000824 3300032002 Bacteria 16266
78 Ga0307416_100255056 3300032002 Bacteria 1710
79 Ga0307416_100678692 3300032002 Bacteria 1117
80 Ga0307414_10321751 3300032004 Bacteria 1317
81 Ga0307411_10027646 3300032005 Bacteria 3436
82 Ga0307411_10086680 3300032005 Bacteria 2173
83 Ga0307411_10114642 3300032005 Bacteria 1937
84 Ga0307415_100008947 3300032126 Bacteria 5582
85 Ga0307415_100074049 3300032126 Bacteria 2405
86 Ga0307415_100109812 3300032126 Bacteria 2044
87 Ga0307415_100131005 3300032126 Bacteria 1898
88 Ga0307415_100323951 3300032126 Bacteria 1286
89 Ga0373958_0046781 3300034819 Bacteria 903
90 Ga0395900_0039139 3300037418 Bacteria 4886
91 Ga0395900_0142622 3300037418 Bacteria 2452
92 Ga0395898_0072842 3300037466 Bacteria 3318
93 Ga0395898_0364377 3300037466 Bacteria 1378
94 Ga0395905_0129443 3300037471 Bacteria 2374
95 Ga0395901_0076031 3300038443 Bacteria 3503
96 Ga0395901_0153118 3300038443 Bacteria 2422
97 Ga0395901_1510425 3300038443 Bacteria 627
98 Ga0451807_0638385 3300041486 Bacteria 936
99 Ga0439448_0042398 3300042005 Bacteria 1475
100 Ga0439450_011241 3300042008 Bacteria 1749
101 Ga0439454_019418 3300042011 Bacteria 988
102 Ga0439455_0033081 3300042012 Bacteria 1295
103 Ga0439463_015784 3300042016 Bacteria 1867
104 Ga0450888_001777 3300042126 Bacteria 2084
105 Ga0439435_0057269 3300042436 Bacteria 1128
106 Ga0439444_0001955 3300042437 Bacteria 2752
107 Ga0439464_0033462 3300042439 Bacteria 1447
108 Ga0466963_0428622 3300044694 Bacteria 933
109 Ga0466957_0011141 3300044842 Bacteria 5178
110 Ga0466967_0007265 3300045976 Bacteria 7970
111 Ga0495628_0485555 3300046516 Bacteria 893
112 Ga0495587_0024102 3300046536 Bacteria 3734
113 Ga0495645_0029696 3300046543 Bacteria 3977
114 Ga0495656_0184515 3300046615 Bacteria 1027
115 Ga0495658_0003907 3300046683 Bacteria 7364
116 Ga0495649_0383537 3300046694 Bacteria 707
117 Ga0495600_0049220 3300046809 Bacteria 2750
118 Ga0495684_0296281 3300047471 Bacteria 1163
119 Ga0495593_0025016 3300047673 Bacteria 3304
120 Ga0496109_0000007 3300048912 Bacteria 247554
121 Ga0496112_0499649 3300048915 Bacteria 1152
122 Ga0496112_0876495 3300048915 Bacteria 820
123 nmdc:mga03n38_65570_c1 3300050490 Bacteria 1666
124 nmdc:mga00v17_24650_c1 3300050491 Bacteria 3491
125 nmdc:mga07m45_45998_c2 3300050496 Bacteria 1885
126 nmdc:mga05p37_123337_c1 3300050507 Bacteria 3182
127 nmdc:mga05p37_5176_c1 3300050507 Bacteria 15296
128 nmdc:mga09592_682703_c1 3300050508 Bacteria 875
129 nmdc:mga0qj67_594770_c1 3300050509 Bacteria 885
130 nmdc:mga0qj67_7457_c1 3300050509 Bacteria 8080
131 nmdc:mga06r32_264903_c1 3300050510 Bacteria 1706
132 nmdc:mga08y16_102532_c1 3300050511 Bacteria 2979
133 Ga0495601_0140421 3300053077 Bacteria 1575
134 Ga0495612_0000438 3300053078 Bacteria 16632
135 Ga0495612_0202734 3300053078 Bacteria 875
136 Ga0590071_026351 3300059421 Bacteria 1379
137 Ga0590077_014914 3300059426 Bacteria 1621

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013307 Ga0157372_10177943 Ga0157372_101779432 190
2 3300014325 Ga0163163_10279444 Ga0163163_102794442 190
3 3300038443 Ga0395901_1510425 Ga0395901_1510425_30_602 190
4 3300046615 Ga0495656_0184515 Ga0495656_0184515_156_728 190
5 3300037418 Ga0395900_0039139 Ga0395900_0039139_160_813 191
6 3300037466 Ga0395898_0072842 Ga0395898_0072842_1267_1920 191
7 3300038443 Ga0395901_0076031 Ga0395901_0076031_2662_3315 191
8 3300005614 Ga0068856_100000577 Ga0068856_10000057723 192
9 3300009094 Ga0111539_10209672 Ga0111539_102096722 192
10 3300026078 Ga0207702_10000060 Ga0207702_1000006079 192
11 3300027907 Ga0207428_10205557 Ga0207428_102055572 192
12 3300042005 Ga0439448_0042398 Ga0439448_0042398_516_1121 192
13 3300042008 Ga0439450_011241 Ga0439450_011241_873_1478 192
14 3300042011 Ga0439454_019418 Ga0439454_019418_74_679 192
15 3300042012 Ga0439455_0033081 Ga0439455_0033081_250_855 192
16 3300042016 Ga0439463_015784 Ga0439463_015784_374_979 192
17 3300042126 Ga0450888_001777 Ga0450888_001777_1416_2021 192
18 3300042436 Ga0439435_0057269 Ga0439435_0057269_71_676 192
19 3300042437 Ga0439444_0001955 Ga0439444_0001955_775_1380 192
20 3300042439 Ga0439464_0033462 Ga0439464_0033462_754_1359 192
21 3300044842 Ga0466957_0011141 Ga0466957_0011141_1832_2416 192
22 3300050511 nmdc:mga08y16_102532_c1 nmdc:mga08y16_102532_c1_1147_1725 192
23 3300005335 Ga0070666_10235212 Ga0070666_102352122 193
24 3300005367 Ga0070667_100645720 Ga0070667_1006457202 193
25 3300005445 Ga0070708_100018865 Ga0070708_1000188656 193
26 3300005985 Ga0081539_10134920 Ga0081539_101349202 193
27 3300025903 Ga0207680_10243597 Ga0207680_102435972 193
28 3300025910 Ga0207684_10547114 Ga0207684_105471141 193
29 3300046516 Ga0495628_0485555 Ga0495628_0485555_85_666 193
30 3300046694 Ga0495649_0383537 Ga0495649_0383537_47_628 193
31 3300053077 Ga0495601_0140421 Ga0495601_0140421_407_1063 193
32 3300031852 Ga0307410_10650036 Ga0307410_106500361 194
33 3300032002 Ga0307416_100678692 Ga0307416_1006786921 194
34 3300032005 Ga0307411_10027646 Ga0307411_100276463 194
35 3300032126 Ga0307415_100131005 Ga0307415_1001310052 194
36 3300005347 Ga0070668_100355022 Ga0070668_1003550222 195
37 3300005445 Ga0070708_100549415 Ga0070708_1005494151 195
38 3300005467 Ga0070706_100323290 Ga0070706_1003232903 195
39 3300005468 Ga0070707_100035270 Ga0070707_1000352705 195
40 3300005471 Ga0070698_100056520 Ga0070698_1000565201 195
41 3300005518 Ga0070699_100017236 Ga0070699_1000172366 195
42 3300005518 Ga0070699_100163051 Ga0070699_1001630512 195
43 3300005536 Ga0070697_100764797 Ga0070697_1007647971 195
44 3300005840 Ga0068870_10201241 Ga0068870_102012412 195
45 3300025910 Ga0207684_10211106 Ga0207684_102111062 195
46 3300025922 Ga0207646_10182363 Ga0207646_101823632 195
47 3300025972 Ga0207668_10442099 Ga0207668_104420992 195
48 3300031548 Ga0307408_100615109 Ga0307408_1006151092 195
49 3300031824 Ga0307413_10056728 Ga0307413_100567282 195
50 3300031852 Ga0307410_10390381 Ga0307410_103903812 195
51 3300031901 Ga0307406_10086749 Ga0307406_100867493 195
52 3300031901 Ga0307406_11039147 Ga0307406_110391472 195
53 3300031911 Ga0307412_10222156 Ga0307412_102221562 195
54 3300032004 Ga0307414_10321751 Ga0307414_103217512 195
55 3300032005 Ga0307411_10086680 Ga0307411_100866803 195
56 3300032005 Ga0307411_10114642 Ga0307411_101146422 195
57 3300032126 Ga0307415_100323951 Ga0307415_1003239511 195
58 3300034819 Ga0373958_0046781 Ga0373958_0046781_264_872 195
59 3300045976 Ga0466967_0007265 Ga0466967_0007265_3384_3971 195
60 3300046536 Ga0495587_0024102 Ga0495587_0024102_241_831 195
61 3300046809 Ga0495600_0049220 Ga0495600_0049220_1001_1591 195
62 3300047471 Ga0495684_0296281 Ga0495684_0296281_245_835 195
63 3300048915 Ga0496112_0499649 Ga0496112_0499649_126_773 195
64 3300046543 Ga0495645_0029696 Ga0495645_0029696_605_1207 196
65 3300005467 Ga0070706_100003949 Ga0070706_10000394913 197
66 3300005468 Ga0070707_100099078 Ga0070707_1000990782 197
67 3300005471 Ga0070698_100372070 Ga0070698_1003720702 197
68 3300006844 Ga0075428_100005274 Ga0075428_10000527414 197
69 3300006846 Ga0075430_100547756 Ga0075430_1005477562 197
70 3300006847 Ga0075431_100358721 Ga0075431_1003587211 197
71 3300006880 Ga0075429_100418751 Ga0075429_1004187512 197
72 3300009147 Ga0114129_10001814 Ga0114129_1000181417 197
73 3300025910 Ga0207684_10041205 Ga0207684_100412056 197
74 3300025922 Ga0207646_10084174 Ga0207646_100841742 197
75 3300048915 Ga0496112_0876495 Ga0496112_0876495_95_688 197
76 3300050507 nmdc:mga05p37_5176_c1 nmdc:mga05p37_5176_c1_9838_10431 197
77 3300050508 nmdc:mga09592_682703_c1 nmdc:mga09592_682703_c1_90_683 197
78 3300050509 nmdc:mga0qj67_594770_c1 nmdc:mga0qj67_594770_c1_25_618 197
79 3300050509 nmdc:mga0qj67_7457_c1 nmdc:mga0qj67_7457_c1_1155_1769 197
80 3300050510 nmdc:mga06r32_264903_c1 nmdc:mga06r32_264903_c1_310_903 197
81 3300053078 Ga0495612_0000438 Ga0495612_0000438_9035_9628 197
82 3300053078 Ga0495612_0202734 Ga0495612_0202734_83_676 197
83 3300005937 Ga0081455_10244438 Ga0081455_102444382 198
84 3300005983 Ga0081540_1000986 Ga0081540_10009865 198
85 3300009094 Ga0111539_10054703 Ga0111539_100547034 198
86 3300009147 Ga0114129_10470056 Ga0114129_104700562 198
87 3300028654 Ga0265322_10029070 Ga0265322_100290703 198
88 3300028800 Ga0265338_10095715 Ga0265338_100957151 198
89 3300050507 nmdc:mga05p37_123337_c1 nmdc:mga05p37_123337_c1_482_1093 198
90 3300005539 Ga0068853_100060982 Ga0068853_1000609822 199
91 3300005937 Ga0081455_10020386 Ga0081455_100203866 199
92 3300013104 Ga0157370_10022615 Ga0157370_100226154 199
93 3300026041 Ga0207639_10051999 Ga0207639_100519994 199
94 3300031548 Ga0307408_100260756 Ga0307408_1002607562 199
95 3300031731 Ga0307405_10137004 Ga0307405_101370042 199
96 3300044694 Ga0466963_0428622 Ga0466963_0428622_247_846 199
97 3300046683 Ga0495658_0003907 Ga0495658_0003907_3627_4244 199
98 3300048912 Ga0496109_0000007 Ga0496109_0000007_67680_68285 199
99 3300005445 Ga0070708_100037710 Ga0070708_1000377105 200
100 3300005468 Ga0070707_100000368 Ga0070707_10000036831 200
101 3300005468 Ga0070707_100735468 Ga0070707_1007354681 200
102 3300005518 Ga0070699_100250236 Ga0070699_1002502362 200
103 3300013296 Ga0157374_10236534 Ga0157374_102365342 200
104 3300025910 Ga0207684_10290865 Ga0207684_102908652 200
105 3300025922 Ga0207646_10002107 Ga0207646_1000210718 200
106 3300032126 Ga0307415_100074049 Ga0307415_1000740495 200
107 3300037418 Ga0395900_0142622 Ga0395900_0142622_453_1055 200
108 3300037466 Ga0395898_0364377 Ga0395898_0364377_125_727 200
109 3300037471 Ga0395905_0129443 Ga0395905_0129443_1534_2136 200
110 3300038443 Ga0395901_0153118 Ga0395901_0153118_514_1116 200
111 3300047673 Ga0495593_0025016 Ga0495593_0025016_525_1130 200
112 3300059421 Ga0590071_026351 Ga0590071_026351_180_821 200
113 3300059426 Ga0590077_014914 Ga0590077_014914_869_1510 200
114 3300005435 Ga0070714_100087667 Ga0070714_1000876673 201
115 3300006048 Ga0075363_100001707 Ga0075363_1000017077 201
116 3300006051 Ga0075364_10009712 Ga0075364_100097123 201
117 3300006186 Ga0075369_10155770 Ga0075369_101557702 201
118 3300006353 Ga0075370_10039460 Ga0075370_100394602 201
119 3300025929 Ga0207664_10101664 Ga0207664_101016643 201
120 3300032002 Ga0307416_100255056 Ga0307416_1002550562 201
121 3300041486 Ga0451807_0638385 Ga0451807_0638385_268_891 201
122 3300050490 nmdc:mga03n38_65570_c1 nmdc:mga03n38_65570_c1_220_843 201
123 3300050491 nmdc:mga00v17_24650_c1 nmdc:mga00v17_24650_c1_1981_2604 201
124 3300050496 nmdc:mga07m45_45998_c2 nmdc:mga07m45_45998_c2_917_1540 201
125 3300005981 Ga0081538_10000803 Ga0081538_1000080315 202
126 3300006871 Ga0075434_100371192 Ga0075434_1003711922 202
127 3300006881 Ga0068865_100000160 Ga0068865_10000016018 202
128 3300025938 Ga0207704_10000236 Ga0207704_1000023617 202
129 3300031731 Ga0307405_10341742 Ga0307405_103417421 202
130 3300031903 Ga0307407_10528479 Ga0307407_105284792 202
131 3300031995 Ga0307409_100125600 Ga0307409_1001256002 202
132 3300031995 Ga0307409_100436603 Ga0307409_1004366032 202
133 3300032002 Ga0307416_100000824 Ga0307416_1000008244 202
134 3300032126 Ga0307415_100008947 Ga0307415_1000089474 202
135 3300032126 Ga0307415_100109812 Ga0307415_1001098122 202
136 3300003373 JGI25407J50210_10016797 JGI25407J50210_100167971 203
137 3300005981 Ga0081538_10001646 Ga0081538_100016469 203

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11066

DUF2867

Protein of unknown function (DUF2867)

18

179

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5w8m-assembly5.cif.gz_E error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8208 121 158
5w8m-assembly4.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7805 121 160
5w8m-assembly6.cif.gz_F error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7531 121 158
3cax-assembly1.cif.gz_A-2 crystal structure of uncharacterized protein pf0695 0.6814 120 154
5w8m-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.6753 112 160
ID Description Score Start End Superfamily
af_Q5KQF5_333_447_3.30.310.80 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Kinase associated domain 1, KA1 0.7586 117 160 3.30.310.80
af_P9WL87_17_165_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.7337 112 191 3.30.530.20
af_A0A1D6HNQ0_12_337_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.7115 117 160 2.120.10.80
af_A0A1D8PLT3_1_151_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.703 112 189 3.30.530.20
af_A0A1D6ERI0_395_507_2.60.40.1670 Mainly Beta;Sandwich;Immunoglobulin-like;beta-sandwich domain of Sec23/24 0.6878 129 158 2.60.40.1670
ID Description Score Start End GO Terms
AF-A0A6J4QM02-F1-model_v4 DUF2867 domain-containing protein 0.9284 1 191 GO:0016020
AF-A0A838ICM1-F1-model_v4 DUF2867 domain-containing protein 0.9157 1 190
AF-A0A117K0K6-F1-model_v4 deleted 0.9154 1 191
AF-A0A7W9M351-F1-model_v4 DUF2867 domain-containing protein 0.9078 2 191
AF-A0A838ICM1-F1-model_v4 DUF2867 domain-containing protein 0.9067 1 190

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pLDDT pTM Quality
76.55 0.76 High
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Predicted Structure (AlphaFold2)

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