F168201

General Info

Members Datasets Scaffolds Average Seq Length
136 95 87 386

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2791355222|2793182872
Length 434
Sequence FLLIIYLAFISLGLPDSLLGSAWPVMQPEIGASFGSAGILSMIIAGGTIVSSLASGTIVGRLGVGKVTLISCLMTAGALVGFSVAPSFVWLAVLAIPLGLGAGSVDAGLNQYVAENYKAHHMSWLHCFWGVGATTGPLIMSAFIAGDYSWRGGYAAVAIIQFALVVVLFLTLPLWERVAEEHKLEKAIQNDERDFSNEEKTKNETKVDPEFSSVADASSGIAFKNKTATEKLNRPAKANLFAIKGIKPSLAAFLLYCGAESMVGLWGASFLVGVREVTAVTAAGWVSMYYGGITIGRLITGFITLMVSNVVLIRCGQIVTIAGGLLLILPLPAIFSLAGFVLVGLGLAPIYPGLLHETPARFGKENSARLMGYQMAVAYTGSTFLPPLFGVLATKTSVSLFPLVLLIILGLMLFSAEKVNLALRKPKEGIRSGA

Samples

Sample ID Description Type Environment
1 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
2 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
3 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
4 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
5 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
6 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
7 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
8 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
9 2738543010 Bacillus sp. YR335 Isolate Unclassified
10 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
11 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
12 2818991441 Niallia circulans 3243 Isolate Rhizosphere
13 2818991459 Paenibacillus sp. 597 Isolate Unclassified
14 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
15 2849139964 Bacillus sp. R-71875 Isolate Unclassified
16 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
17 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
18 2857472729 Cohnella sp. R-74144 Isolate Unclassified
19 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
20 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
21 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
22 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
23 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
24 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
25 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
26 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
27 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
28 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
29 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
30 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
31 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
32 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
33 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
34 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
35 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
36 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
37 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
38 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
39 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
40 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
41 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
42 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
43 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
44 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
45 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
52 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
76 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
77 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
78 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
79 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
80 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
81 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
82 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
83 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
84 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
85 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
86 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
87 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
90 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
91 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
92 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
93 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
94 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
95 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 63.97
Metatranscriptomes 0
Isolates 36.03

Biome Distribution

Category Percentage (%)
Aerial Root 1.47
Bulb 0
Endosphere 5.88
Nodule 5.15
Rhizoplane 1.47
Rhizosphere 44.85
Stem 0
Stem Tuber 0
Unclassified 41.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055538_1000379 3300003751 Bacteria 18310
2 Ga0055538_1000529 3300003751 Bacteria 13517
3 Ga0055541_1000894 3300003841 Bacteria 7170
4 Ga0065714_10007212 3300005288 Bacteria 3576
5 Ga0070675_100108811 3300005354 Bacteria 2341
6 Ga0070678_100113062 3300005456 Bacteria 2127
7 Ga0070662_100297149 3300005457 Bacteria 1311
8 Ga0070665_100068516 3300005548 Bacteria 3557
9 Ga0068859_100292915 3300005617 Bacteria 1721
10 Ga0068860_100041543 3300005843 Bacteria 4392
11 Ga0097620_100292896 3300006931 Bacteria 1721
12 Ga0079104_1000181 3300006946 Bacteria 89820
13 Ga0079104_1000246 3300006946 Bacteria 72294
14 Ga0105244_10087403 3300009036 Bacteria 1536
15 Ga0105241_10074328 3300009174 Unclassified 2647
16 Ga0105246_10002373 3300011119 Bacteria 11362
17 Ga0157374_10422831 3300013296 Bacteria 1331
18 Ga0157378_10403533 3300013297 Bacteria 1347
19 Ga0209784_100226 3300025224 Bacteria 37903
20 Ga0209784_100233 3300025224 Bacteria 36929
21 Ga0209566_100097 3300025225 Bacteria 135294
22 Ga0209566_100379 3300025225 Bacteria 36322
23 Ga0209675_1001979 3300025291 Bacteria 11000
24 Ga0207655_1014988 3300025728 Bacteria 4340
25 Ga0207688_10056777 3300025901 Bacteria 2200
26 Ga0207680_10128700 3300025903 Unclassified 1666
27 Ga0207645_10000168 3300025907 Bacteria 52201
28 Ga0207689_10003098 3300025942 Bacteria 15295
29 Ga0207689_10038452 3300025942 Bacteria 3963
30 Ga0207648_10038040 3300026089 Unclassified 4235
31 Ga0207648_10087569 3300026089 Bacteria 2718
32 Ga0207683_10032285 3300026121 Bacteria 4549
33 Ga0209281_1000052 3300027111 Bacteria 314741
34 Ga0209281_1000241 3300027111 Bacteria 110257
35 Ga0209281_1007929 3300027111 Bacteria 2621
36 Ga0268264_10084289 3300028381 Unclassified 2724
37 Ga0307414_10000366 3300032004 Bacteria 24760
38 Ga0307414_10056109 3300032004 Unclassified 2761
39 Ga0307414_10060583 3300032004 Bacteria 2677
40 Ga0451795_0936475 3300041456 Bacteria 1511
41 Ga0451577_0002237 3300042876 Bacteria 23521
42 Ga0453683_0001521 3300044673 Bacteria 19792
43 Ga0453683_0050368 3300044673 Bacteria 2609
44 Ga0453684_0000001 3300044712 Bacteria 2623166
45 Ga0453684_0011816 3300044712 Bacteria 14550
46 Ga0453684_0138704 3300044712 Bacteria 2908
47 Ga0453684_0207757 3300044712 Bacteria 2278
48 Ga0453684_0272835 3300044712 Bacteria 1932
49 Ga0453684_0446014 3300044712 Unclassified 1441
50 Ga0451576_0000664 3300045051 Bacteria 70655
51 Ga0495650_0046994 3300046471 Bacteria 1808
52 Ga0495654_0023387 3300046530 Bacteria 3201
53 Ga0495649_0079268 3300046694 Bacteria 1757
54 Ga0496116_0000473 3300048919 Bacteria 55659
55 Ga0496116_0009930 3300048919 Bacteria 8047
56 Ga0496116_0013144 3300048919 Bacteria 6699
57 Ga0496116_0019721 3300048919 Bacteria 5154
58 Ga0496117_0000161 3300048920 Bacteria 141379
59 Ga0496118_0061477 3300048921 Bacteria 2781
60 Ga0496119_0000042 3300048922 Bacteria 200701
61 Ga0496119_0009846 3300048922 Bacteria 8122
62 Ga0496119_0013410 3300048922 Bacteria 6533
63 Ga0496119_0046661 3300048922 Bacteria 2703
64 Ga0496120_0000083 3300048923 Bacteria 157876
65 Ga0496120_0002207 3300048923 Bacteria 20560
66 Ga0496120_0003661 3300048923 Bacteria 13760
67 Ga0496120_0005902 3300048923 Bacteria 9552
68 Ga0496120_0009496 3300048923 Bacteria 6891
69 Ga0496121_0105858 3300048924 Bacteria 2158
70 Ga0496122_0000325 3300048925 Bacteria 103742
71 Ga0496122_0003932 3300048925 Bacteria 18996
72 Ga0496122_0022491 3300048925 Bacteria 5600
73 Ga0496122_0024675 3300048925 Bacteria 5254
74 Ga0496122_0050403 3300048925 Unclassified 3176
75 Ga0496122_0059791 3300048925 Bacteria 2811
76 Ga0496123_0001574 3300048926 Bacteria 31186
77 Ga0496123_0014605 3300048926 Bacteria 6494
78 Ga0496124_0001329 3300048927 Bacteria 37200
79 Ga0496124_0039612 3300048927 Bacteria 4083
80 Ga0496124_0110928 3300048927 Bacteria 2208
81 Ga0496125_0000010 3300048928 Bacteria 671167
82 Ga0496125_0002159 3300048928 Bacteria 26327
83 Ga0496125_0023306 3300048928 Bacteria 5716
84 Ga0496126_0000461 3300048929 Bacteria 80907
85 Ga0496126_0001807 3300048929 Bacteria 31325
86 Ga0496126_0001872 3300048929 Bacteria 30609
87 Ga0496126_0056396 3300048929 Bacteria 3551

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300011119 Ga0105246_10002373 Ga0105246_1000237313 293
2 3300048919 Ga0496116_0019721 Ga0496116_0019721_1673_2893 293
3 3300048927 Ga0496124_0039612 Ga0496124_0039612_1149_2369 293
4 3300025728 Ga0207655_1014988 Ga0207655_10149882 296
5 3300044712 Ga0453684_0011816 Ga0453684_0011816_2956_4131 296
6 3300048924 Ga0496121_0105858 Ga0496121_0105858_717_1919 297
7 3300032004 Ga0307414_10056109 Ga0307414_100561094 299
8 3300048928 Ga0496125_0023306 Ga0496125_0023306_2488_3768 300
9 3300032004 Ga0307414_10060583 Ga0307414_100605832 301
10 3300009036 Ga0105244_10087403 Ga0105244_100874031 304
11 3300032004 Ga0307414_10000366 Ga0307414_1000036612 308
12 3300006946 Ga0079104_1000246 Ga0079104_100024663 314
13 3300027111 Ga0209281_1000052 Ga0209281_1000052298 314
14 3300027111 Ga0209281_1007929 Ga0209281_10079292 314
15 3300042876 Ga0451577_0002237 Ga0451577_0002237_65_1252 314
16 3300044712 Ga0453684_0138704 Ga0453684_0138704_1268_2455 314
17 3300048922 Ga0496119_0046661 Ga0496119_0046661_444_1610 316
18 3300005354 Ga0070675_100108811 Ga0070675_1001088112 319
19 3300005456 Ga0070678_100113062 Ga0070678_1001130622 319
20 3300005457 Ga0070662_100297149 Ga0070662_1002971491 319
21 3300005548 Ga0070665_100068516 Ga0070665_1000685164 319
22 3300005617 Ga0068859_100292915 Ga0068859_1002929151 319
23 3300005843 Ga0068860_100041543 Ga0068860_1000415434 319
24 3300006931 Ga0097620_100292896 Ga0097620_1002928961 319
25 3300009174 Ga0105241_10074328 Ga0105241_100743283 319
26 3300013297 Ga0157378_10403533 Ga0157378_104035331 319
27 3300025901 Ga0207688_10056777 Ga0207688_100567772 319
28 3300025903 Ga0207680_10128700 Ga0207680_101287002 319
29 3300025907 Ga0207645_10000168 Ga0207645_1000016854 319
30 3300025942 Ga0207689_10003098 Ga0207689_1000309816 319
31 3300026089 Ga0207648_10038040 Ga0207648_100380401 319
32 3300026121 Ga0207683_10032285 Ga0207683_100322853 319
33 3300028381 Ga0268264_10084289 Ga0268264_100842891 319
34 3300048925 Ga0496122_0059791 Ga0496122_0059791_394_1611 319
35 3300046471 Ga0495650_0046994 Ga0495650_0046994_13_1206 320
36 3300025225 Ga0209566_100097 Ga0209566_10009794 322
37 3300048923 Ga0496120_0009496 Ga0496120_0009496_603_1766 322
38 3300025224 Ga0209784_100233 Ga0209784_10023323 323
39 3300025291 Ga0209675_1001979 Ga0209675_10019798 323
40 3300048920 Ga0496117_0000161 Ga0496117_0000161_66924_68111 323
41 3300048921 Ga0496118_0061477 Ga0496118_0061477_618_1805 323
42 3300048925 Ga0496122_0022491 Ga0496122_0022491_3371_4558 323
43 3300048926 Ga0496123_0001574 Ga0496123_0001574_25773_26960 323
44 3300048928 Ga0496125_0000010 Ga0496125_0000010_536881_538068 323
45 3300048929 Ga0496126_0056396 Ga0496126_0056396_1052_2239 323
46 3300003841 Ga0055541_1000894 Ga0055541_10008945 324
47 3300025225 Ga0209566_100379 Ga0209566_1003799 324
48 3300048925 Ga0496122_0000325 Ga0496122_0000325_63184_64353 324
49 3300048926 Ga0496123_0014605 Ga0496123_0014605_4891_6060 324
50 3300048929 Ga0496126_0001807 Ga0496126_0001807_20896_22065 324
51 3300048929 Ga0496126_0001872 Ga0496126_0001872_18043_19239 325
52 3300048919 Ga0496116_0009930 Ga0496116_0009930_4381_5697 326
53 3300048925 Ga0496122_0024675 Ga0496122_0024675_3758_5074 326
54 3300048927 Ga0496124_0001329 Ga0496124_0001329_33704_35020 326
55 3300048928 Ga0496125_0002159 Ga0496125_0002159_2173_3489 326
56 3300044712 Ga0453684_0000001 Ga0453684_0000001_1569625_1570803 327
57 3300048922 Ga0496119_0009846 Ga0496119_0009846_6822_8009 327
58 3300048923 Ga0496120_0002207 Ga0496120_0002207_8644_9831 327
59 3300003751 Ga0055538_1000529 Ga0055538_100052911 329
60 3300025224 Ga0209784_100226 Ga0209784_1002262 329
61 iso_pu_bacteria 2548877040 2550900726 329
62 3300048925 Ga0496122_0050403 Ga0496122_0050403_598_1788 332
63 3300025942 Ga0207689_10038452 Ga0207689_100384524 333
64 3300026089 Ga0207648_10087569 Ga0207648_100875693 333
65 3300044712 Ga0453684_0446014 Ga0453684_0446014_94_1260 333
66 3300005288 Ga0065714_10007212 Ga0065714_100072123 334
67 3300013296 Ga0157374_10422831 Ga0157374_104228311 334
68 3300048923 Ga0496120_0005902 Ga0496120_0005902_5465_6637 335
69 iso_pu_bacteria 2852627209 2852631137 336
70 3300044673 Ga0453683_0050368 Ga0453683_0050368_1487_2593 337
71 3300045051 Ga0451576_0000664 Ga0451576_0000664_18896_20002 337
72 3300006946 Ga0079104_1000181 Ga0079104_100018157 338
73 3300027111 Ga0209281_1000241 Ga0209281_100024153 338
74 3300041456 Ga0451795_0936475 Ga0451795_0936475_252_1451 338
75 3300044673 Ga0453683_0001521 Ga0453683_0001521_11166_12356 338
76 3300044712 Ga0453684_0207757 Ga0453684_0207757_755_1942 338
77 3300044712 Ga0453684_0272835 Ga0453684_0272835_531_1718 338
78 3300046530 Ga0495654_0023387 Ga0495654_0023387_2094_3191 338
79 3300046694 Ga0495649_0079268 Ga0495649_0079268_438_1622 338
80 3300048919 Ga0496116_0000473 Ga0496116_0000473_33088_34275 338
81 3300048919 Ga0496116_0013144 Ga0496116_0013144_3998_5185 338
82 3300048922 Ga0496119_0000042 Ga0496119_0000042_50703_51890 338
83 3300048922 Ga0496119_0013410 Ga0496119_0013410_3395_4582 338
84 3300048923 Ga0496120_0000083 Ga0496120_0000083_54772_55959 338
85 3300048923 Ga0496120_0003661 Ga0496120_0003661_3931_5118 338
86 3300048927 Ga0496124_0110928 Ga0496124_0110928_190_1377 338
87 3300048929 Ga0496126_0000461 Ga0496126_0000461_63214_64401 338
88 iso_pu_bacteria 2571042143 2571532164 338
89 iso_pu_bacteria 2738543010 2739233729 340
90 iso_pu_bacteria 2818991459 2819675236 340
91 iso_pu_bacteria 2857472729 2857474751 340
92 iso_pu_bacteria 2512564013 2512636463 341
93 iso_pu_bacteria 2524023129 2524188653 341
94 iso_pu_bacteria 2915597211 2915601333 341
95 iso_pu_bacteria 2929183550 2929186488 341
96 iso_pu_bacteria 3001892409 3001897342 341
97 iso_pu_bacteria 8054795415 8054797581 341
98 iso_pu_bacteria 8002317523 8002318777 342
99 iso_pu_bacteria 8007371054 8007371405 342
100 3300048925 Ga0496122_0003932 Ga0496122_0003932_4784_6025 343
101 iso_pu_bacteria 2600255286 2601638408 343
102 iso_pu_bacteria 2728368933 2728535353 343
103 iso_pu_bacteria 2857591370 2857592295 343
104 iso_pu_bacteria 2938649242 2938650948 343
105 iso_pu_bacteria 2968558590 2968563328 343
106 iso_pu_bacteria 2988225383 2988229680 343
107 iso_pu_bacteria 2996632988 2996636557 343
108 iso_pu_bacteria 8054465665 8054468942 343
109 iso_pu_bacteria 2643221543 2643737727 344
110 iso_pu_bacteria 2821111986 2821112805 344
111 iso_pu_bacteria 2904113452 2904114491 344
112 iso_pu_bacteria 2971403814 2971409426 346
113 iso_pu_bacteria 2984527788 2984529547 346
114 iso_pu_bacteria 2984532647 2984535654 346
115 iso_pu_bacteria 3001267043 3001267919 346
116 iso_pu_bacteria 3001272096 3001273435 346
117 iso_pu_bacteria 3006988479 3006989393 346
118 iso_pu_bacteria 8055632911 8055633588 346
119 iso_pu_bacteria 2816332186 2816866180 347
120 iso_pu_bacteria 2818991441 2819570618 347
121 iso_pu_bacteria 2849139964 2849144797 347
122 iso_pu_bacteria 2885526491 2885529684 347
123 iso_pu_bacteria 2904162308 2904164959 347
124 iso_pu_bacteria 2904755435 2904760561 347
125 iso_pu_bacteria 2919425241 2919428470 347
126 iso_pu_bacteria 2956897341 2956898267 347
127 iso_pu_bacteria 3006969106 3006970270 347
128 iso_pu_bacteria 8057473075 8057476621 347
129 iso_pu_bacteria 8057977335 8057981786 347
130 3300003751 Ga0055538_1000379 Ga0055538_100037911 348
131 iso_pu_bacteria 2512564039 2512733694 348
132 iso_pu_bacteria 2524023129 2524190375 348
133 iso_pu_bacteria 2791355222 2793182872 348
134 iso_pu_bacteria 2857465823 2857467407 348
135 iso_pu_bacteria 2865002811 2865006416 348
136 iso_pu_bacteria 2971403814 2971404731 348

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

5

386

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hcl-assembly2.cif.gz_B crystal structure of a mfs transporter with ligand at 2.69 angstroem resolution 0.8045 2 336
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.7791 2 348
6zgu-assembly2.cif.gz_B crystal structure of a mfs transporter with bound 3-(2-methylphenyl)propanoic acid at 2.41 angstroem resolution 0.7695 2 336
6zgr-assembly2.cif.gz_B crystal structure of a mfs transporter with bound 1-hydroxynaphthalene-2-carboxylic acid at 2.67 angstroem resolution 0.7656 2 336
6m2l-assembly1.cif.gz_A crystal structure of plasmodium falciparum hexose transporter pfht1 bound with c3361 0.7639 2 336
ID Description Score Start End Superfamily
af_Q08280_294_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9376 159 338 1.20.1250.20
af_Q6PDC8_307_486_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9334 165 341 1.20.1250.20
af_A0A1D6E9C8_1_113_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9287 2 74 1.20.1250.20
af_A4QN56_306_560_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9222 162 340 1.20.1250.20
af_Q6PDC8_307_486_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9136 165 341 1.20.1250.20
ID Description Score Start End GO Terms
AF-D3EJV5-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9602 48 348 GO:0005886
GO:0022857
AF-A0A5Q4EKP6-F1-model_v4 MFS transporter 0.9214 1 341 GO:0016020
GO:0022857
AF-A0A3T0D2U0-F1-model_v4 MFS transporter 0.9169 2 346 GO:0005886
GO:0022857
AF-A0A3D2D414-F1-model_v4 MFS transporter 0.9147 2 338 GO:0005886
GO:0022857
AF-A0A358PWZ1-F1-model_v4 deleted 0.9122 2 338

Feature Viewer

pLDDT pTM Quality
88.63 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map