F164660

General Info

Members Datasets Scaffolds Average Seq Length
135 89 270 258

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0077033|Ga0501047_0077033_2087_2977
Length 296
Sequence MSTFRVLQFNMQFGQVWDDAYPDRAPINLDATIAEIRRHDADIIMLQEVEHAIPGGTQVDPPPHYTRLKAELAGYHSWFSYPKADPRELPFGIGLAIFSRTPLRDCMRRDVPSPPVEFNFFGKKTTPTDRVLIGAKTTVFGHDVQLYNTHLLAFFMLGSSSSTHPFQRNLVADQLVAEPGATILTGDFNVSHHNSLITQFAERGFDTVQRNAVTWRRRPFVLDHVFFNAPLRCVGHRVEATPASDHHVLVADFDFARKDGEPVSLGAEVAPDAARRSGDRRAPGAHEHRRRASDRA

Samples

Sample ID Description Type Environment
1 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
17 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
25 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
32 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
33 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
34 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
35 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
36 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
37 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
38 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
39 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
40 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
41 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
48 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
54 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
55 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
56 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
57 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
62 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
71 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
72 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
73 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
74 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
75 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
78 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
79 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
80 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
81 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
82 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
83 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
84 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
85 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
86 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
87 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
88 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
89 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.41
Nodule 0
Rhizoplane 0
Rhizosphere 88.89
Stem 0
Stem Tuber 0
Unclassified 9.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501047_0077033 3300049581 Bacteria 3209
2 rootL2_10054847 3300003322 Bacteria 6272
3 rootL2_10260706 3300003322 Bacteria 3184
4 Ga0070683_100063631 3300005329 Unclassified 3432
5 Ga0070680_100224395 3300005336 Bacteria 1586
6 Ga0070713_100029232 3300005436 Bacteria 4362
7 Ga0070705_100022739 3300005440 Bacteria 3354
8 Ga0070694_100317422 3300005444 Bacteria 1198
9 Ga0070681_10056527 3300005458 Bacteria 3905
10 Ga0070706_100120878 3300005467 Bacteria 2441
11 Ga0070707_100167833 3300005468 Bacteria 2139
12 Ga0070679_100010131 3300005530 Bacteria 8937
13 Ga0070696_100285265 3300005546 Bacteria 1260
14 Ga0070696_100365290 3300005546 Bacteria 1121
15 Ga0070665_100632468 3300005548 Bacteria 1083
16 Ga0070704_100117936 3300005549 Bacteria 2032
17 Ga0068855_100572392 3300005563 Unclassified 1221
18 Ga0075366_10092734 3300006195 Bacteria 1810
19 Ga0075370_10208315 3300006353 Bacteria 1154
20 Ga0075428_100005102 3300006844 Bacteria 14594
21 Ga0075430_100426891 3300006846 Bacteria 1094
22 Ga0075429_100063604 3300006880 Bacteria 3214
23 Ga0075435_100392523 3300007076 Bacteria 1193
24 Ga0111539_10014261 3300009094 Bacteria 9927
25 Ga0157378_10386290 3300013297 Bacteria 1376
26 Ga0157376_10373457 3300014969 Bacteria 1371
27 Ga0207684_10143201 3300025910 Bacteria 2056
28 Ga0207707_10108308 3300025912 Bacteria 2429
29 Ga0207660_10362016 3300025917 Bacteria 1164
30 Ga0207646_10276871 3300025922 Unclassified 1516
31 Ga0207700_10025352 3300025928 Bacteria 4116
32 Ga0207661_10141007 3300025944 Bacteria 2074
33 Ga0207428_10118792 3300027907 Bacteria 2029
34 Ga0265319_1001142 3300028563 Bacteria 16503
35 Ga0265319_1006387 3300028563 Bacteria 5467
36 Ga0265319_1013633 3300028563 Bacteria 3220
37 Ga0265334_10027728 3300028573 Unclassified 2280
38 Ga0265318_10001174 3300028577 Bacteria 16206
39 Ga0265318_10004524 3300028577 Bacteria 6722
40 Ga0265318_10019119 3300028577 Bacteria 2782
41 Ga0265323_10000006 3300028653 Bacteria 141508
42 Ga0265323_10013488 3300028653 Bacteria 3256
43 Ga0265323_10081085 3300028653 Bacteria 1096
44 Ga0265323_10082698 3300028653 Unclassified 1083
45 Ga0265322_10001136 3300028654 Bacteria 9132
46 Ga0265322_10001325 3300028654 Bacteria 8278
47 Ga0265322_10008199 3300028654 Bacteria 3046
48 Ga0265336_10002403 3300028666 Bacteria 7751
49 Ga0265336_10002445 3300028666 Bacteria 7665
50 Ga0265336_10031588 3300028666 Bacteria 1644
51 Ga0307515_10045934 3300028794 Bacteria 6692
52 Ga0265338_10000201 3300028800 Bacteria 112868
53 Ga0265338_10000653 3300028800 Bacteria 59925
54 Ga0265338_10157898 3300028800 Unclassified 1755
55 Ga0265324_10000485 3300029957 Bacteria 27807
56 Ga0307511_10003602 3300030521 Bacteria 15866
57 Ga0265330_10012784 3300031235 Bacteria 3918
58 Ga0265332_10109367 3300031238 Unclassified 1165
59 Ga0265328_10096851 3300031239 Bacteria 1091
60 Ga0265320_10003749 3300031240 Bacteria 10114
61 Ga0265320_10004037 3300031240 Bacteria 9648
62 Ga0265320_10004101 3300031240 Bacteria 9575
63 Ga0265320_10064647 3300031240 Bacteria 1737
64 Ga0265320_10085554 3300031240 Unclassified 1467
65 Ga0265320_10094788 3300031240 Bacteria 1380
66 Ga0265325_10068798 3300031241 Unclassified 1781
67 Ga0265339_10125687 3300031249 Bacteria 1315
68 Ga0265331_10051050 3300031250 Bacteria 1981
69 Ga0265331_10084233 3300031250 Bacteria 1474
70 Ga0265327_10002440 3300031251 Bacteria 19613
71 Ga0265327_10002565 3300031251 Bacteria 18834
72 Ga0265327_10082968 3300031251 Bacteria 1578
73 Ga0265316_10000505 3300031344 Bacteria 43994
74 Ga0265316_10004837 3300031344 Bacteria 13276
75 Ga0265316_10063970 3300031344 Bacteria 2850
76 Ga0265316_10156684 3300031344 Bacteria 1704
77 Ga0265313_10000392 3300031595 Bacteria 47135
78 Ga0265313_10002444 3300031595 Bacteria 16037
79 Ga0265313_10005558 3300031595 Bacteria 9239
80 Ga0265314_10002202 3300031711 Bacteria 20334
81 Ga0265314_10046253 3300031711 Bacteria 3071
82 Ga0265342_10007060 3300031712 Bacteria 8279
83 Ga0265342_10042500 3300031712 Bacteria 2745
84 Ga0265342_10085162 3300031712 Bacteria 1820
85 Ga0307507_10017697 3300033179 Bacteria 8166
86 Ga0395905_0499340 3300037471 Bacteria 1117
87 Ga0451577_0056901 3300042876 Unclassified 3488
88 Ga0451577_0118969 3300042876 Bacteria 2366
89 Ga0453683_0004967 3300044673 Bacteria 9345
90 Ga0453683_0176205 3300044673 Bacteria 1355
91 Ga0453684_0092741 3300044712 Bacteria 3722
92 Ga0466968_0050709 3300044735 Unclassified 1772
93 Ga0451576_0000029 3300045051 Bacteria 404449
94 Ga0451576_0001385 3300045051 Bacteria 41630
95 Ga0495599_0201247 3300046678 Bacteria 1223
96 Ga0501032_0000944 3300049569 Bacteria 23507
97 Ga0501033_0001254 3300049570 Bacteria 22736
98 Ga0501037_0002780 3300049573 Bacteria 12671
99 Ga0501039_0035542 3300049575 Bacteria 3845
100 Ga0501041_0002885 3300049577 Bacteria 9842
101 Ga0501043_0051065 3300049579 Bacteria 3250
102 Ga0501043_0057675 3300049579 Bacteria 3049
103 Ga0501046_0015400 3300049580 Bacteria 6427
104 Ga0501046_0019442 3300049580 Bacteria 5635
105 Ga0501046_0029464 3300049580 Bacteria 4461
106 Ga0501046_0051689 3300049580 Bacteria 3241
107 Ga0501047_0249247 3300049581 Unclassified 1624
108 Ga0501048_0281677 3300049582 Unclassified 1182
109 Ga0501048_0329986 3300049582 Bacteria 1087
110 Ga0501071_0130561 3300049587 Bacteria 1866
111 Ga0501076_0018912 3300049592 Bacteria 5257
112 Ga0501080_0102894 3300049742 Bacteria 2649
113 Ga0501081_0000374 3300049743 Bacteria 24501
114 Ga0501083_0006581 3300049744 Bacteria 8246
115 Ga0501083_0006680 3300049744 Bacteria 8183
116 Ga0501035_0000849 3300049822 Bacteria 32602
117 Ga0501035_0004058 3300049822 Bacteria 13937
118 Ga0501035_0047506 3300049822 Bacteria 3853
119 Ga0501044_0001818 3300049823 Bacteria 24837
120 Ga0501044_0021894 3300049823 Bacteria 6816
121 Ga0501044_0038191 3300049823 Bacteria 5015
122 Ga0501045_0015891 3300049824 Bacteria 5339
123 nmdc:mga0yw44_225381_c1 3300050492 Bacteria 1243
124 nmdc:mga0k408_351588_c1 3300050493 Bacteria 878
125 nmdc:mga07m45_205977_c1 3300050496 Bacteria 1144
126 nmdc:mga09592_20299_c1 3300050508 Bacteria 5461
127 nmdc:mga0qj67_288484_c1 3300050509 Bacteria 1330
128 nmdc:mga08y16_5489_c1 3300050511 Bacteria 13255
129 Ga0500646_0012938 3300053090 Bacteria 2158
130 Ga0500583_0004282 3300053092 Bacteria 4629
131 Ga0500583_0168848 3300053092 Bacteria 1089
132 Ga0500568_0014966 3300053139 Bacteria 3483
133 Ga0500604_0001901 3300053151 Bacteria 5796
134 Ga0501084_0030178 3300054114 Bacteria 4534
135 Ga0501082_0153906 3300060353 Bacteria 1998
136 Ga0501047_0077033
137 rootL2_10054847
138 rootL2_10260706
139 Ga0070683_100063631
140 Ga0070680_100224395
141 Ga0070713_100029232
142 Ga0070705_100022739
143 Ga0070694_100317422
144 Ga0070681_10056527
145 Ga0070706_100120878
146 Ga0070707_100167833
147 Ga0070679_100010131
148 Ga0070696_100285265
149 Ga0070696_100365290
150 Ga0070665_100632468
151 Ga0070704_100117936
152 Ga0068855_100572392
153 Ga0075366_10092734
154 Ga0075370_10208315
155 Ga0075428_100005102
156 Ga0075430_100426891
157 Ga0075429_100063604
158 Ga0075435_100392523
159 Ga0111539_10014261
160 Ga0157378_10386290
161 Ga0157376_10373457
162 Ga0207684_10143201
163 Ga0207707_10108308
164 Ga0207660_10362016
165 Ga0207646_10276871
166 Ga0207700_10025352
167 Ga0207661_10141007
168 Ga0207428_10118792
169 Ga0265319_1001142
170 Ga0265319_1006387
171 Ga0265319_1013633
172 Ga0265334_10027728
173 Ga0265318_10001174
174 Ga0265318_10004524
175 Ga0265318_10019119
176 Ga0265323_10000006
177 Ga0265323_10013488
178 Ga0265323_10081085
179 Ga0265323_10082698
180 Ga0265322_10001136
181 Ga0265322_10001325
182 Ga0265322_10008199
183 Ga0265336_10002403
184 Ga0265336_10002445
185 Ga0265336_10031588
186 Ga0307515_10045934
187 Ga0265338_10000201
188 Ga0265338_10000653
189 Ga0265338_10157898
190 Ga0265324_10000485
191 Ga0307511_10003602
192 Ga0265330_10012784
193 Ga0265332_10109367
194 Ga0265328_10096851
195 Ga0265320_10003749
196 Ga0265320_10004037
197 Ga0265320_10004101
198 Ga0265320_10064647
199 Ga0265320_10085554
200 Ga0265320_10094788
201 Ga0265325_10068798
202 Ga0265339_10125687
203 Ga0265331_10051050
204 Ga0265331_10084233
205 Ga0265327_10002440
206 Ga0265327_10002565
207 Ga0265327_10082968
208 Ga0265316_10000505
209 Ga0265316_10004837
210 Ga0265316_10063970
211 Ga0265316_10156684
212 Ga0265313_10000392
213 Ga0265313_10002444
214 Ga0265313_10005558
215 Ga0265314_10002202
216 Ga0265314_10046253
217 Ga0265342_10007060
218 Ga0265342_10042500
219 Ga0265342_10085162
220 Ga0307507_10017697
221 Ga0395905_0499340
222 Ga0451577_0056901
223 Ga0451577_0118969
224 Ga0453683_0004967
225 Ga0453683_0176205
226 Ga0453684_0092741
227 Ga0466968_0050709
228 Ga0451576_0000029
229 Ga0451576_0001385
230 Ga0495599_0201247
231 Ga0501032_0000944
232 Ga0501033_0001254
233 Ga0501037_0002780
234 Ga0501039_0035542
235 Ga0501041_0002885
236 Ga0501043_0051065
237 Ga0501043_0057675
238 Ga0501046_0015400
239 Ga0501046_0019442
240 Ga0501046_0029464
241 Ga0501046_0051689
242 Ga0501047_0249247
243 Ga0501048_0281677
244 Ga0501048_0329986
245 Ga0501071_0130561
246 Ga0501076_0018912
247 Ga0501080_0102894
248 Ga0501081_0000374
249 Ga0501083_0006581
250 Ga0501083_0006680
251 Ga0501035_0000849
252 Ga0501035_0004058
253 Ga0501035_0047506
254 Ga0501044_0001818
255 Ga0501044_0021894
256 Ga0501044_0038191
257 Ga0501045_0015891
258 nmdc:mga0yw44_225381_c1
259 nmdc:mga0k408_351588_c1
260 nmdc:mga07m45_205977_c1
261 nmdc:mga09592_20299_c1
262 nmdc:mga0qj67_288484_c1
263 nmdc:mga08y16_5489_c1
264 Ga0500646_0012938
265 Ga0500583_0004282
266 Ga0500583_0168848
267 Ga0500568_0014966
268 Ga0500604_0001901
269 Ga0501084_0030178
270 Ga0501082_0153906

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03372

Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

7

246

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ruw-assembly1.cif.gz_A the crystal structure of endonuclease/exonuclease/phosphatase from beutenbergia cavernae dsm 12333 0.7413 3 255
5inn-assembly3.cif.gz_C mouse tdp2 d358n protein, apo state with increased disorder amongst variable dna-binding grasp conformations 0.7318 2 256
5inm-assembly3.cif.gz_C mouse tdp2 protein, apo state with variable dna-binding grasp conformations 0.7303 4 256
5inn-assembly3.cif.gz_C mouse tdp2 d358n protein, apo state with increased disorder amongst variable dna-binding grasp conformations 0.7289 2 256
4ruw-assembly1.cif.gz_A the crystal structure of endonuclease/exonuclease/phosphatase from beutenbergia cavernae dsm 12333 0.7284 3 255
ID Description Score Start End Superfamily
af_Q86I62_481_671_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.8204 4 228 3.60.10.10
af_Q86I62_481_671_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.8086 4 228 3.60.10.10
af_Q9H720_430_658_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.8074 7 255 3.60.10.10
af_Q9HDZ2_710_875_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.8055 9 202 3.60.10.10
af_A4I2W7_1063_1264_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.7951 8 186 3.60.10.10
ID Description Score Start End GO Terms
AF-I6AQB6-F1-model_v4 Endonuclease/exonuclease/phosphatase domain-containing protein 0.9887 1 256 GO:0003824
GO:0006506
GO:0016020
AF-I6AQB6-F1-model_v4 Endonuclease/exonuclease/phosphatase domain-containing protein 0.9849 1 256 GO:0003824
GO:0006506
GO:0016020
AF-A0A2V2RWT9-F1-model_v4 Endonuclease 0.9836 3 257 GO:0004519
GO:0006506
GO:0016020
AF-A0A146G5W6-F1-model_v4 Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family 0.9789 4 256 GO:0004519
GO:0004527
GO:0006506
GO:0016020
AF-A0A2V2RWT9-F1-model_v4 Endonuclease 0.9723 3 257 GO:0004519
GO:0006506
GO:0016020

Map