F164215

General Info

Members Datasets Scaffolds Average Seq Length
135 118 270 892

Family's Representative Sequence

Representative Sequence 3300044735|Ga0466968_0006339|Ga0466968_0006339_117_3095
Length 986
Sequence MVKILVEPGRTIMSNTDDGDVPPHRYTATLAGEIERRWQGTFHAPNPVGSLQPPDGSAVPADKLFVQDMFPYPSGTGLHVGHPLGYIGTDVFARYQRMTGRNVLHTMGFDAFGLPAELYAVQTGTHPRITTEANIARYLAQIQRLGLGHDERRRIATSDVAYYRWTQWIFLQIYNAWYDTAARRARPIAELAAEYAAGVRWTPDGRSWTELTADEQREIIDSRRLVYLSEAPVNWCPGLGTVLANEEVTAEGRSDRGNFPVFRRNLRQWMMRITAYADRLLDDLDLLDWPEKIKTMQRNWIGRSHGARIRFPVGRSSRATNGGSGGSPSTANPPVGGTWRATNIEVFTTRPDTVFGATYLVLAPEHPLVTEITAAQWPPETPSRWTGGAATPAEAITQYRRATAQRSELERQESRDKTGVFTGAYATNPATRSQIPVFIADYVLMGYGTGAIMAVPGEDQRDWDFAEAFGLPIVRTVAPPEDFDGQAYTGEGPTINSEFLDGLNVEEAKKAITEWLETHHAGDATVQYKLRDWLFARQRYWGEPFPIVYDEQGRPYPLPESMLPVELPDVADYAPTTFDPDDADSEPSPPLAKATDWVQVQLDLGDGPKTYRRDTNVMPQWAGSCWYQLRYIDPYNSEAMCDPVNERYWMGPRPELHGRDDPGGLDLYVGGVEHGVLHLLYSRFWHKVLYDLGYVSSAEPYRRLYNQGYIQAYAYTDARGVYVPAEEVIEEPNGGYTWRGQPVRREYGKMGKSLRNSVSPDEMSERYGADTLRVYEMSMGPLDTDRPWATKDVIGAHRFLQRLWRNLIDETTGELRVVDAELDPDVPTDRDTLRALHRAIAGVCEDYAALRLNTAIAKLIELNNHVTKVYGARAGTPRIVAETLVLLLAPVAPHVAEELWSRLGHGESLAHGPMPQADERYLVEDTVEYPIQINGKVRTRMTVPTSASPDEVRAAALAQARLATLVTDEEPRKVIVVPDRLVNIVV

Samples

Sample ID Description Type Environment
1 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
17 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
18 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
19 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
20 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
21 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
33 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
34 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
35 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
42 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
46 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
47 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
48 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
49 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
50 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
51 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
52 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
53 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
54 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
55 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
56 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
57 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
58 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
59 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
60 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
61 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
62 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
66 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
67 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
68 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
69 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
70 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
71 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
72 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
73 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
74 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
75 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
76 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
77 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
78 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
79 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
80 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
81 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
82 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
83 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
84 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
85 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
86 2582580736 Prauserella sp. Am3 Isolate Unclassified
87 2643221679 Angustibacter sp. Root456 Isolate Unclassified
88 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
89 2643221692 Nocardia sp. Root136 Isolate Unclassified
90 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
91 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
92 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
93 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
94 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
95 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
96 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
97 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
98 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
99 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
100 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
101 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
102 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
103 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
104 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
105 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
106 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
107 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
108 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
109 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
110 2922554459 Rhodococcus sp. 66b Isolate Unclassified
111 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
112 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
113 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
114 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
115 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
116 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
117 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
118 8054920844 Frankia tisae Agncl-8 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 74.07
Metatranscriptomes 0
Isolates 25.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.41
Nodule 1.48
Rhizoplane 0.74
Rhizosphere 68.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466968_0006339 3300044735 Bacteria 4456
2 Ga0070668_100009743 3300005347 Bacteria 7123
3 Ga0070714_100001067 3300005435 Bacteria 19599
4 Ga0070710_10000026 3300005437 Bacteria 74564
5 Ga0070708_100003049 3300005445 Bacteria 13009
6 Ga0070663_100003534 3300005455 Bacteria 9023
7 Ga0070706_100012504 3300005467 Bacteria 7862
8 Ga0070706_100012909 3300005467 Bacteria 7731
9 Ga0070698_100001557 3300005471 Bacteria 25459
10 Ga0070699_100001539 3300005518 Bacteria 21069
11 Ga0070699_100006031 3300005518 Bacteria 10595
12 Ga0070697_100002876 3300005536 Bacteria 13238
13 Ga0070665_100000922 3300005548 Bacteria 37641
14 Ga0081538_10023816 3300005981 Bacteria 4386
15 Ga0075368_10006237 3300006042 Bacteria 4153
16 Ga0075363_100000549 3300006048 Bacteria 12213
17 Ga0075364_10000351 3300006051 Bacteria 22879
18 Ga0075369_10008303 3300006186 Bacteria 3992
19 Ga0105243_10000071 3300009148 Bacteria 118865
20 Ga0157379_10047803 3300014968 Bacteria 3818
21 Ga0213873_10000046 3300021358 Bacteria 29055
22 Ga0213875_10002726 3300021388 Bacteria 10429
23 Ga0207684_10000273 3300025910 Bacteria 76521
24 Ga0207646_10002415 3300025922 Bacteria 22046
25 Ga0207646_10031598 3300025922 Bacteria 4794
26 Ga0207664_10001510 3300025929 Bacteria 15245
27 Ga0207709_10005856 3300025935 Bacteria 6948
28 Ga0207689_10015108 3300025942 Bacteria 6545
29 Ga0207640_10006195 3300025981 Bacteria 6550
30 Ga0207678_10005568 3300026067 Bacteria 11260
31 Ga0207708_10043074 3300026075 Bacteria 3440
32 Ga0207675_100016239 3300026118 Bacteria 6949
33 Ga0268266_10004250 3300028379 Bacteria 13775
34 Ga0265323_10000046 3300028653 Bacteria 66777
35 Ga0265322_10000378 3300028654 Bacteria 18462
36 Ga0307515_10084560 3300028794 Bacteria 4073
37 Ga0314311_1127143 3300030733 Bacteria 8262
38 Ga0316182_1345086 3300030745 Bacteria 7492
39 Ga0265327_10007714 3300031251 Bacteria 8231
40 Ga0265316_10014491 3300031344 Bacteria 6932
41 Ga0307508_10010398 3300031616 Bacteria 8515
42 Ga0265342_10004027 3300031712 Bacteria 11734
43 Ga0307413_10001890 3300031824 Bacteria 8286
44 Ga0307518_10016778 3300031838 Bacteria 5251
45 Ga0373931_0002159 3300035691 Bacteria 8662
46 Ga0395900_0057950 3300037418 Bacteria 3988
47 Ga0436364_0030707 3300037853 Bacteria 5660
48 Ga0436364_0362678 3300037853 Bacteria 17296
49 Ga0436364_0454887 3300037853 Bacteria 53594
50 Ga0436362_0506247 3300039453 Bacteria 34546
51 Ga0466972_0001410 3300044658 Bacteria 11643
52 Ga0466972_0012046 3300044658 Bacteria 4345
53 Ga0453683_0024112 3300044673 Bacteria 3874
54 Ga0466963_0013842 3300044694 Bacteria 4966
55 Ga0451576_0107057 3300045051 Bacteria 2909
56 Ga0466958_0003598 3300045836 Bacteria 8075
57 Ga0466967_0000708 3300045976 Bacteria 17003
58 Ga0495651_0023127 3300046462 Bacteria 4834
59 Ga0495650_0007406 3300046471 Bacteria 6604
60 Ga0495608_0039376 3300046511 Bacteria 3168
61 Ga0495665_0012687 3300046531 Bacteria 4561
62 Ga0495668_0000649 3300046616 Bacteria 41701
63 Ga0495657_0036710 3300046675 Bacteria 3384
64 Ga0495581_0010983 3300047315 Bacteria 5233
65 Ga0495683_0001402 3300047323 Bacteria 15917
66 Ga0496102_0003069 3300048905 Bacteria 14140
67 Ga0496123_0024885 3300048926 Bacteria 4532
68 Ga0501037_0002126 3300049573 Bacteria 14347
69 Ga0501039_0006867 3300049575 Bacteria 8659
70 Ga0501039_0021994 3300049575 Bacteria 4894
71 Ga0501040_0030457 3300049576 Bacteria 3645
72 Ga0501068_0000098 3300049584 Bacteria 37486
73 Ga0501068_0007087 3300049584 Bacteria 6205
74 Ga0501068_0029380 3300049584 Bacteria 3254
75 Ga0501069_0002045 3300049585 Bacteria 10125
76 Ga0501070_0000956 3300049586 Bacteria 26049
77 Ga0501070_0023208 3300049586 Bacteria 5197
78 Ga0501070_0063133 3300049586 Bacteria 3068
79 Ga0501071_0049012 3300049587 Bacteria 3039
80 Ga0501072_0002045 3300049588 Bacteria 15003
81 Ga0501072_0011343 3300049588 Bacteria 6811
82 Ga0501072_0032771 3300049588 Bacteria 4069
83 Ga0501074_0014714 3300049590 Bacteria 5690
84 Ga0501074_0020364 3300049590 Bacteria 4821
85 Ga0501074_0045862 3300049590 Bacteria 3161
86 Ga0501079_0011208 3300049741 Bacteria 6839
87 Ga0501080_0004170 3300049742 Bacteria 12818
88 Ga0501080_0050461 3300049742 Bacteria 3872
89 Ga0501083_0000154 3300049744 Bacteria 45503
90 nmdc:mga03n38_10190_c1 3300050490 Bacteria 3449
91 nmdc:mga00v17_2963_c1 3300050491 Bacteria 8716
92 nmdc:mga00v17_4899_c1 3300050491 Bacteria 7016
93 nmdc:mga0yw44_40139_c1 3300050492 Bacteria 2779
94 nmdc:mga06r32_576_c1 3300050510 Bacteria 14033
95 nmdc:mga0sz30_2697_c2 3300050516 Bacteria 5408
96 Ga0495595_0006030 3300053084 Bacteria 4925
97 Ga0500568_0000015 3300053139 Bacteria 219403
98 Ga0501084_0006157 3300054114 Bacteria 9865
99 Ga0590075_001927 3300059424 Bacteria 5027
100 Ga0466962_0022592 3300061719 Bacteria 3023
101 2558910194 2558860112 Bacteria 9931328
102 2566992980 2565956761 Bacteria 6601618
103 2583152435 2582580736 Bacteria 5325865
104 2644444706 2643221679 Bacteria 3839507
105 2644456438 2643221681 Bacteria 3707866
106 2644517974 2643221692 Bacteria 7282860
107 2738891811 2738541308 Bacteria 7020677
108 2739205801 2738543005 Bacteria 5278128
109 2739236111 2738543011 Bacteria 5731169
110 2739365798 2738543034 Bacteria 6084756
111 2744956708 2744054611 Bacteria 5611514
112 2753036476 2751185725 Bacteria 5740550
113 2753069393 2751185734 Bacteria 8863695
114 2753324346 2751185792 Bacteria 5739090
115 2816506286 2816332139 Bacteria 9138787
116 2855389800 2855386786 Bacteria 4752232
117 2870728125 2870721527 Bacteria 9689237
118 2870782781 2870782633 Bacteria 9624083
119 2889304479 2889300758 Bacteria 5690814
120 2891328751 2891326441 Bacteria 6439512
121 2904536442 2904535858 Bacteria 6308016
122 2904768621 2904765812 Bacteria 5369154
123 2904772106 2904770941 Bacteria 5580202
124 2908815763 2908811453 Bacteria 5478616
125 2919421995 2919420072 Bacteria 5390363
126 2919434447 2919432681 Bacteria 5390474
127 2922558385 2922554459 Bacteria 6683962
128 2928144111 2928142448 Bacteria 5288925
129 2939745123 2939743619 Bacteria 5762299
130 2956940577 2956939328 Bacteria 3474458
131 3001121110 3001119090 Bacteria 3449530
132 8003314784 8003314358 Bacteria 10575343
133 8047719099 8047710418 Bacteria 11023148
134 8054919343 8054913762 Bacteria 7713009
135 8054923371 8054920844 Bacteria 7068637
136 Ga0466968_0006339
137 Ga0070668_100009743
138 Ga0070714_100001067
139 Ga0070710_10000026
140 Ga0070708_100003049
141 Ga0070663_100003534
142 Ga0070706_100012504
143 Ga0070706_100012909
144 Ga0070698_100001557
145 Ga0070699_100001539
146 Ga0070699_100006031
147 Ga0070697_100002876
148 Ga0070665_100000922
149 Ga0081538_10023816
150 Ga0075368_10006237
151 Ga0075363_100000549
152 Ga0075364_10000351
153 Ga0075369_10008303
154 Ga0105243_10000071
155 Ga0157379_10047803
156 Ga0213873_10000046
157 Ga0213875_10002726
158 Ga0207684_10000273
159 Ga0207646_10002415
160 Ga0207646_10031598
161 Ga0207664_10001510
162 Ga0207709_10005856
163 Ga0207689_10015108
164 Ga0207640_10006195
165 Ga0207678_10005568
166 Ga0207708_10043074
167 Ga0207675_100016239
168 Ga0268266_10004250
169 Ga0265323_10000046
170 Ga0265322_10000378
171 Ga0307515_10084560
172 Ga0314311_1127143
173 Ga0316182_1345086
174 Ga0265327_10007714
175 Ga0265316_10014491
176 Ga0307508_10010398
177 Ga0265342_10004027
178 Ga0307413_10001890
179 Ga0307518_10016778
180 Ga0373931_0002159
181 Ga0395900_0057950
182 Ga0436364_0030707
183 Ga0436364_0362678
184 Ga0436364_0454887
185 Ga0436362_0506247
186 Ga0466972_0001410
187 Ga0466972_0012046
188 Ga0453683_0024112
189 Ga0466963_0013842
190 Ga0451576_0107057
191 Ga0466958_0003598
192 Ga0466967_0000708
193 Ga0495651_0023127
194 Ga0495650_0007406
195 Ga0495608_0039376
196 Ga0495665_0012687
197 Ga0495668_0000649
198 Ga0495657_0036710
199 Ga0495581_0010983
200 Ga0495683_0001402
201 Ga0496102_0003069
202 Ga0496123_0024885
203 Ga0501037_0002126
204 Ga0501039_0006867
205 Ga0501039_0021994
206 Ga0501040_0030457
207 Ga0501068_0000098
208 Ga0501068_0007087
209 Ga0501068_0029380
210 Ga0501069_0002045
211 Ga0501070_0000956
212 Ga0501070_0023208
213 Ga0501070_0063133
214 Ga0501071_0049012
215 Ga0501072_0002045
216 Ga0501072_0011343
217 Ga0501072_0032771
218 Ga0501074_0014714
219 Ga0501074_0020364
220 Ga0501074_0045862
221 Ga0501079_0011208
222 Ga0501080_0004170
223 Ga0501080_0050461
224 Ga0501083_0000154
225 nmdc:mga03n38_10190_c1
226 nmdc:mga00v17_2963_c1
227 nmdc:mga00v17_4899_c1
228 nmdc:mga0yw44_40139_c1
229 nmdc:mga06r32_576_c1
230 nmdc:mga0sz30_2697_c2
231 Ga0495595_0006030
232 Ga0500568_0000015
233 Ga0501084_0006157
234 Ga0590075_001927
235 Ga0466962_0022592
236 2558910194
237 2566992980
238 2583152435
239 2644444706
240 2644456438
241 2644517974
242 2738891811
243 2739205801
244 2739236111
245 2739365798
246 2744956708
247 2753036476
248 2753069393
249 2753324346
250 2816506286
251 2855389800
252 2870728125
253 2870782781
254 2889304479
255 2891328751
256 2904536442
257 2904768621
258 2904772106
259 2908815763
260 2919421995
261 2919434447
262 2922558385
263 2928144111
264 2939745123
265 2956940577
266 3001121110
267 8003314784
268 8047719099
269 8054919343
270 8054923371

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13603

tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

298

517

0.94

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

64

182

0.9

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

829

954

0.89

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

57

188

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7n12-assembly2.cif.gz_A crystal structure of the m. abscessus leurs editing domain in complex with epetraborole-amp adduct 0.9469 300 493
5agt-assembly1.cif.gz_A crystal structure of the leurs editing domain of mycobacterium tuberculosis in complex with the adduct (s)-3-(aminomethyl)-4-chloro-7-ethoxybenzo[c][1,2]oxaborol-1(3h)-ol-amp 0.9447 300 491
7pqk-assembly1.cif.gz_A co-crystal structure of m. tuberculosis leurs in complex with the adduct formed by prodrug cmpd1 with adenosine-monophosphate 0.9445 300 493
5ags-assembly1.cif.gz_A crystal structure of the leurs editing domain of mycobacterium tuberculosis in complex with the adduct 3-(aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3h)-ol-amp 0.9424 300 491
4k48-assembly1.cif.gz_A structure of the streptococcus pneumoniae leucyl-trna synthetase editing domain 0.9388 300 491
ID Description Score Start End Superfamily
af_A0A0P0UX97_304_509_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9525 468 676 3.40.50.620
af_Q2FXH2_584_742_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9447 723 885 1.10.730.10
5agsA00 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9424 300 491 3.90.740.10
af_Q2FXH2_584_742_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.939 723 885 1.10.730.10
af_Q2FXH2_743_805_3.10.20.590 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9365 886 946 3.10.20.590
ID Description Score Start End GO Terms
AF-K6WEK5-F1-model_v4 Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS) 0.9827 11 947 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A7Y0KMZ6-F1-model_v4 Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS) 0.9824 11 947 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A3B0SKT5-F1-model_v4 leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) 0.9795 14 841 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A7W7WZ92-F1-model_v4 Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS) 0.979 4 947 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429
AF-A0A7W7WZ92-F1-model_v4 Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS) 0.9771 4 947 GO:0002161
GO:0004823
GO:0005524
GO:0005829
GO:0006429

Map