F163917

General Info

Members Datasets Scaffolds Average Seq Length
135 119 135 354

Family's Representative Sequence

Representative Sequence 3300035410|Ga0373924_0015269|Ga0373924_0015269_387_1595
Length 402
Sequence VAFKRRWVPAFAGTTIWLVLKVSARPAETRSPPIPENAVKIPCHPLCIFLLTLLAAAPAPAADYPKPVEADFVMRDFHFANGAVLPELRIHYRTFGHIQRDAQGHAKNVVLIGHGTGGSGASLVEPPYGSTLFAPELFGKGQPLDAEKFLVVVPDGLGHGKSSKPSDGLHARFPRYGYRDMVQAQYRLITEGLKADHLRLVMGTSMGGMQTWMWGEEHPDFMDALMPLASLPTAIAGRNRMWRKIAIDAIRQDPQWNHGDYTQQPAGLRVTAQVLLFMGSNAALRQKATPTRDATDAWFDEAAAKAVAGMDANDIAYALDASFDYNPAPRLGTIRAPLLAVNSADDLINPPELGILESGVRQVPRGWAVLLPFSSETIGHGSHTKAALWKDYLVQLLRETER

Samples

Sample ID Description Type Environment
1 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
2 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
31 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
46 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
47 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
65 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
66 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
67 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
68 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
69 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
75 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
76 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
77 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
80 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
81 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
82 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
83 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
84 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
85 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
86 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
87 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
88 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
89 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
90 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
91 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
102 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
103 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
104 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
113 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
114 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
115 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
116 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
117 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
118 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
119 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.22
Nodule 0
Rhizoplane 0
Rhizosphere 64.44
Stem 0
Stem Tuber 0
Unclassified 13.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000030 3300002737 Bacteria 218717
2 JGI25163J39215_1000051 3300002771 Bacteria 52373
3 JGI25164J39214_1000033 3300002772 Bacteria 143975
4 JGI25165J46597_1000056 3300003214 Bacteria 218721
5 rootH2_10222362 3300003320 Unclassified 1715
6 Ga0070659_100112174 3300005366 Bacteria 2202
7 Ga0070701_10005913 3300005438 Bacteria 5107
8 Ga0070700_100033619 3300005441 Bacteria 3090
9 Ga0070681_10256146 3300005458 Bacteria 1662
10 Ga0070699_100121996 3300005518 Bacteria 2292
11 Ga0070665_100179757 3300005548 Bacteria 2116
12 Ga0068855_100049749 3300005563 Bacteria 4942
13 Ga0068855_100188670 3300005563 Bacteria 2326
14 Ga0068852_100018134 3300005616 Bacteria 5540
15 Ga0068864_100104516 3300005618 Bacteria 2516
16 Ga0068851_10055741 3300005834 Bacteria 2014
17 Ga0081455_10004072 3300005937 Bacteria 16554
18 Ga0081455_10194446 3300005937 Bacteria 1524
19 Ga0081539_10001321 3300005985 Bacteria 43278
20 Ga0070717_10175991 3300006028 Bacteria 1863
21 Ga0075364_10138475 3300006051 Bacteria 1636
22 Ga0070712_100302897 3300006175 Unclassified 1294
23 Ga0075367_10005945 3300006178 Bacteria 6125
24 Ga0075369_10045721 3300006186 Bacteria 1883
25 Ga0075366_10031775 3300006195 Bacteria 3107
26 Ga0075370_10035354 3300006353 Bacteria 2804
27 Ga0075430_100029460 3300006846 Bacteria 4659
28 Ga0075431_100001287 3300006847 Bacteria 22907
29 Ga0075433_10011348 3300006852 Bacteria 7171
30 Ga0075434_100004616 3300006871 Bacteria 12443
31 Ga0075435_100083787 3300007076 Bacteria 2622
32 Ga0105251_10001910 3300009011 Bacteria 17100
33 Ga0105244_10007514 3300009036 Bacteria 6919
34 Ga0111539_10002654 3300009094 Bacteria 23705
35 Ga0111539_10030909 3300009094 Bacteria 6508
36 Ga0111539_10687996 3300009094 Bacteria 1190
37 Ga0114129_10028152 3300009147 Bacteria 7962
38 Ga0105242_10319120 3300009176 Bacteria 1424
39 Ga0105248_10111408 3300009177 Bacteria 3086
40 Ga0157370_10120990 3300013104 Bacteria 2444
41 Ga0157370_10320414 3300013104 Bacteria 1430
42 Ga0157369_10108089 3300013105 Bacteria 2959
43 Ga0157372_10154793 3300013307 Bacteria 2647
44 Ga0157375_10124332 3300013308 Bacteria 2693
45 Ga0157380_10295321 3300014326 Bacteria 1490
46 Ga0209760_100016 3300025207 Bacteria 173755
47 Ga0207427_100022 3300025231 Bacteria 469701
48 Ga0209437_100002 3300025233 Bacteria 1574801
49 Ga0209148_1007306 3300025254 Bacteria 2308
50 Ga0209233_1000004 3300025261 Bacteria 1574798
51 Ga0209758_1001423 3300025297 Bacteria 28319
52 Ga0207426_1012817 3300025302 Bacteria 3134
53 Ga0207655_1000059 3300025728 Bacteria 265297
54 Ga0207713_1021550 3300025735 Bacteria 3085
55 Ga0207699_10012111 3300025906 Bacteria 4379
56 Ga0207707_10083992 3300025912 Bacteria 2780
57 Ga0207663_10308407 3300025916 Unclassified 1185
58 Ga0207709_10104157 3300025935 Bacteria 1882
59 Ga0207711_10085467 3300025941 Bacteria 2764
60 Ga0207667_10098983 3300025949 Bacteria 3008
61 Ga0207708_10013582 3300026075 Bacteria 6086
62 Ga0207428_10003727 3300027907 Bacteria 14629
63 Ga0207428_10017230 3300027907 Bacteria 6204
64 Ga0265336_10014189 3300028666 Bacteria 2643
65 Ga0307515_10110508 3300028794 Bacteria 3216
66 Ga0307515_10152158 3300028794 Bacteria 2412
67 Ga0265313_10002066 3300031595 Bacteria 17975
68 Ga0307405_10304281 3300031731 Bacteria 1211
69 Ga0307410_10177871 3300031852 Bacteria 1609
70 Ga0307412_10158010 3300031911 Bacteria 1681
71 Ga0307510_10001070 3300033180 Bacteria 29137
72 Ga0373958_0006489 3300034819 Bacteria 1825
73 Ga0373940_0013481 3300035088 Bacteria 1979
74 Ga0373951_0016810 3300035091 Bacteria 1653
75 Ga0373962_0002239 3300035242 Bacteria 4625
76 Ga0373924_0015269 3300035410 Bacteria 2917
77 Ga0373931_0036209 3300035691 Bacteria 2571
78 Ga0373937_0163857 3300036401 Bacteria 2085
79 Ga0395900_0078368 3300037418 Bacteria 3395
80 Ga0436363_0158501 3300039450 Bacteria 6152
81 Ga0495627_001244 3300046453 Bacteria 15855
82 Ga0495591_000415 3300046458 Bacteria 35489
83 Ga0495607_0014523 3300046501 Bacteria 5120
84 Ga0495606_0000287 3300046507 Bacteria 87639
85 Ga0495608_0006619 3300046511 Bacteria 8227
86 Ga0495644_0048360 3300046523 Bacteria 1598
87 Ga0495661_0000243 3300046665 Bacteria 62850
88 Ga0495646_0147675 3300046680 Bacteria 1310
89 Ga0495660_0001029 3300046810 Bacteria 20244
90 Ga0495672_0058711 3300047320 Bacteria 2229
91 Ga0495681_0037746 3300047470 Bacteria 2376
92 Ga0496117_0179121 3300048920 Bacteria 1220
93 Ga0496118_0105132 3300048921 Bacteria 1893
94 Ga0496118_0114120 3300048921 Bacteria 1782
95 Ga0496119_0004814 3300048922 Bacteria 13238
96 Ga0496119_0031502 3300048922 Bacteria 3555
97 Ga0496121_0001203 3300048924 Bacteria 45295
98 Ga0496121_0017091 3300048924 Bacteria 7437
99 Ga0496121_0137080 3300048924 Bacteria 1822
100 Ga0496122_0135191 3300048925 Bacteria 1556
101 Ga0496123_0030479 3300048926 Bacteria 3947
102 Ga0496124_0004623 3300048927 Bacteria 15944
103 Ga0496126_0040647 3300048929 Bacteria 4310
104 Ga0496126_0104177 3300048929 Bacteria 2478
105 Ga0501034_0001345 3300049571 Bacteria 33195
106 Ga0501034_0085200 3300049571 Bacteria 3162
107 Ga0501042_0021073 3300049578 Bacteria 4540
108 Ga0501047_0095459 3300049581 Bacteria 2852
109 Ga0501079_0094773 3300049741 Bacteria 2313
110 Ga0501080_0034681 3300049742 Bacteria 4712
111 Ga0501081_0029150 3300049743 Bacteria 3728
112 Ga0501262_000715 3300049759 Bacteria 3855
113 Ga0501044_0150138 3300049823 Bacteria 2313
114 nmdc:mga03683_43881_c1 3300050489 Bacteria 1846
115 nmdc:mga0k408_42719_c1 3300050493 Bacteria 2611
116 nmdc:mga06z11_4208_c1 3300050494 Bacteria 5636
117 nmdc:mga07m45_44755_c1 3300050496 Bacteria 2484
118 nmdc:mga05p37_181373_c1 3300050507 Bacteria 2561
119 nmdc:mga0qj67_9270_c1 3300050509 Bacteria 7319
120 nmdc:mga06r32_53087_c1 3300050510 Bacteria 3883
121 nmdc:mga08y16_264066_c1 3300050511 Bacteria 1778
122 nmdc:mga08y16_7668_c1 3300050511 Bacteria 11297
123 nmdc:mga0n895_19382_c1 3300050512 Bacteria 6322
124 nmdc:mga0rr50_72216_c1 3300050513 Bacteria 2635
125 nmdc:mga0a205_11907_c1 3300050515 Bacteria 8029
126 nmdc:mga0sz30_1988_c1 3300050516 Bacteria 7314
127 Ga0500651_0063316 3300053093 Bacteria 2308
128 Ga0500641_0005740 3300053096 Bacteria 4398
129 Ga0500641_0010224 3300053096 Bacteria 3386
130 Ga0500650_0091747 3300053098 Bacteria 1422
131 Ga0500595_008966 3300053119 Bacteria 4063
132 Ga0500595_039072 3300053119 Bacteria 1538
133 Ga0500652_024643 3300053131 Bacteria 2299
134 Ga0500604_0011818 3300053151 Bacteria 2352
135 Ga0500587_005111 3300053739 Bacteria 1779

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005458 Ga0070681_10256146 Ga0070681_102561462 322
2 3300025912 Ga0207707_10083992 Ga0207707_100839922 322
3 3300005366 Ga0070659_100112174 Ga0070659_1001121742 323
4 3300009036 Ga0105244_10007514 Ga0105244_100075146 327
5 3300025728 Ga0207655_1000059 Ga0207655_1000059180 327
6 3300025935 Ga0207709_10104157 Ga0207709_101041571 327
7 3300047320 Ga0495672_0058711 Ga0495672_0058711_27_1037 335
8 3300048924 Ga0496121_0017091 Ga0496121_0017091_4626_5642 335
9 3300006051 Ga0075364_10138475 Ga0075364_101384752 338
10 3300009094 Ga0111539_10030909 Ga0111539_100309096 338
11 3300034819 Ga0373958_0006489 Ga0373958_0006489_454_1476 338
12 3300035088 Ga0373940_0013481 Ga0373940_0013481_747_1769 338
13 3300035091 Ga0373951_0016810 Ga0373951_0016810_95_1117 338
14 3300035242 Ga0373962_0002239 Ga0373962_0002239_2658_3680 338
15 3300035691 Ga0373931_0036209 Ga0373931_0036209_1223_2245 338
16 3300049759 Ga0501262_000715 Ga0501262_000715_1421_2443 338
17 3300050511 nmdc:mga08y16_264066_c1 nmdc:mga08y16_264066_c1_722_1744 338
18 3300050512 nmdc:mga0n895_19382_c1 nmdc:mga0n895_19382_c1_3387_4409 338
19 3300050513 nmdc:mga0rr50_72216_c1 nmdc:mga0rr50_72216_c1_1292_2314 338
20 3300050515 nmdc:mga0a205_11907_c1 nmdc:mga0a205_11907_c1_870_1892 338
21 3300003320 rootH2_10222362 rootH2_102223621 339
22 3300053131 Ga0500652_024643 Ga0500652_024643_1225_2253 340
23 3300039450 Ga0436363_0158501 Ga0436363_0158501_2949_4001 341
24 3300053739 Ga0500587_005111 Ga0500587_005111_377_1417 344
25 3300005518 Ga0070699_100121996 Ga0070699_1001219961 345
26 3300046511 Ga0495608_0006619 Ga0495608_0006619_1028_2104 345
27 3300025906 Ga0207699_10012111 Ga0207699_100121112 346
28 3300028666 Ga0265336_10014189 Ga0265336_100141891 347
29 3300005438 Ga0070701_10005913 Ga0070701_100059132 348
30 3300005441 Ga0070700_100033619 Ga0070700_1000336192 348
31 3300005563 Ga0068855_100188670 Ga0068855_1001886703 348
32 3300009094 Ga0111539_10002654 Ga0111539_1000265419 348
33 3300009176 Ga0105242_10319120 Ga0105242_103191202 348
34 3300013104 Ga0157370_10320414 Ga0157370_103204142 348
35 3300025302 Ga0207426_1012817 Ga0207426_10128173 348
36 3300026075 Ga0207708_10013582 Ga0207708_100135822 348
37 3300027907 Ga0207428_10003727 Ga0207428_100037274 348
38 3300037418 Ga0395900_0078368 Ga0395900_0078368_1139_2188 348
39 3300046523 Ga0495644_0048360 Ga0495644_0048360_449_1537 348
40 3300046680 Ga0495646_0147675 Ga0495646_0147675_232_1278 348
41 3300049571 Ga0501034_0001345 Ga0501034_0001345_20993_22042 348
42 3300049571 Ga0501034_0085200 Ga0501034_0085200_536_1585 348
43 3300050511 nmdc:mga08y16_7668_c1 nmdc:mga08y16_7668_c1_852_1925 348
44 3300005985 Ga0081539_10001321 Ga0081539_100013214 349
45 3300009094 Ga0111539_10687996 Ga0111539_106879961 349
46 3300014326 Ga0157380_10295321 Ga0157380_102953211 349
47 3300048922 Ga0496119_0031502 Ga0496119_0031502_1954_3036 349
48 3300009177 Ga0105248_10111408 Ga0105248_101114082 350
49 3300013308 Ga0157375_10124332 Ga0157375_101243323 350
50 3300025941 Ga0207711_10085467 Ga0207711_100854671 350
51 3300031595 Ga0265313_10002066 Ga0265313_1000206613 350
52 3300035410 Ga0373924_0015269 Ga0373924_0015269_387_1595 350
53 3300049581 Ga0501047_0095459 Ga0501047_0095459_1477_2532 350
54 3300049742 Ga0501080_0034681 Ga0501080_0034681_1229_2284 350
55 3300049823 Ga0501044_0150138 Ga0501044_0150138_74_1129 350
56 3300005563 Ga0068855_100049749 Ga0068855_1000497492 351
57 3300005616 Ga0068852_100018134 Ga0068852_1000181348 351
58 3300005834 Ga0068851_10055741 Ga0068851_100557412 351
59 3300005937 Ga0081455_10194446 Ga0081455_101944462 351
60 3300006028 Ga0070717_10175991 Ga0070717_101759913 351
61 3300006178 Ga0075367_10005945 Ga0075367_1000594510 351
62 3300006186 Ga0075369_10045721 Ga0075369_100457212 351
63 3300006852 Ga0075433_10011348 Ga0075433_100113482 351
64 3300006871 Ga0075434_100004616 Ga0075434_10000461610 351
65 3300007076 Ga0075435_100083787 Ga0075435_1000837873 351
66 3300013105 Ga0157369_10108089 Ga0157369_101080892 351
67 3300013307 Ga0157372_10154793 Ga0157372_101547934 351
68 3300025297 Ga0209758_1001423 Ga0209758_100142337 351
69 3300025949 Ga0207667_10098983 Ga0207667_100989832 351
70 3300027907 Ga0207428_10017230 Ga0207428_100172306 351
71 3300036401 Ga0373937_0163857 Ga0373937_0163857_208_1269 351
72 3300048920 Ga0496117_0179121 Ga0496117_0179121_98_1159 351
73 3300048921 Ga0496118_0114120 Ga0496118_0114120_677_1738 351
74 3300048929 Ga0496126_0104177 Ga0496126_0104177_519_1580 351
75 3300050489 nmdc:mga03683_43881_c1 nmdc:mga03683_43881_c1_733_1794 351
76 3300050494 nmdc:mga06z11_4208_c1 nmdc:mga06z11_4208_c1_2913_3974 351
77 3300050516 nmdc:mga0sz30_1988_c1 nmdc:mga0sz30_1988_c1_3392_4453 351
78 3300053093 Ga0500651_0063316 Ga0500651_0063316_898_1965 351
79 3300053096 Ga0500641_0005740 Ga0500641_0005740_1165_2223 351
80 3300053096 Ga0500641_0010224 Ga0500641_0010224_761_1822 351
81 3300053098 Ga0500650_0091747 Ga0500650_0091747_193_1260 351
82 3300053119 Ga0500595_039072 Ga0500595_039072_270_1331 351
83 3300053151 Ga0500604_0011818 Ga0500604_0011818_676_1743 351
84 3300048924 Ga0496121_0137080 Ga0496121_0137080_300_1367 352
85 3300005548 Ga0070665_100179757 Ga0070665_1001797572 353
86 3300005618 Ga0068864_100104516 Ga0068864_1001045162 353
87 3300005937 Ga0081455_10004072 Ga0081455_1000407210 353
88 3300006175 Ga0070712_100302897 Ga0070712_1003028971 353
89 3300013104 Ga0157370_10120990 Ga0157370_101209901 353
90 3300025916 Ga0207663_10308407 Ga0207663_103084071 353
91 3300028794 Ga0307515_10152158 Ga0307515_101521582 353
92 3300031731 Ga0307405_10304281 Ga0307405_103042811 353
93 3300031852 Ga0307410_10177871 Ga0307410_101778712 353
94 3300031911 Ga0307412_10158010 Ga0307412_101580102 353
95 3300049578 Ga0501042_0021073 Ga0501042_0021073_2757_3842 354
96 3300049741 Ga0501079_0094773 Ga0501079_0094773_1104_2189 354
97 3300049743 Ga0501081_0029150 Ga0501081_0029150_14_1099 354
98 3300002737 JGI25162J39368_1000030 JGI25162J39368_1000030155 355
99 3300002771 JGI25163J39215_1000051 JGI25163J39215_100005110 355
100 3300002772 JGI25164J39214_1000033 JGI25164J39214_100003367 355
101 3300003214 JGI25165J46597_1000056 JGI25165J46597_100005664 355
102 3300006195 Ga0075366_10031775 Ga0075366_100317753 355
103 3300006353 Ga0075370_10035354 Ga0075370_100353543 355
104 3300006846 Ga0075430_100029460 Ga0075430_1000294605 355
105 3300006847 Ga0075431_100001287 Ga0075431_10000128719 355
106 3300009011 Ga0105251_10001910 Ga0105251_100019105 355
107 3300009147 Ga0114129_10028152 Ga0114129_100281523 355
108 3300025207 Ga0209760_100016 Ga0209760_10001641 355
109 3300025231 Ga0207427_100022 Ga0207427_100022201 355
110 3300025233 Ga0209437_100002 Ga0209437_1000021213 355
111 3300025254 Ga0209148_1007306 Ga0209148_10073062 355
112 3300025261 Ga0209233_1000004 Ga0209233_1000004212 355
113 3300025735 Ga0207713_1021550 Ga0207713_10215502 355
114 3300028794 Ga0307515_10110508 Ga0307515_101105081 355
115 3300033180 Ga0307510_10001070 Ga0307510_100010706 355
116 3300046453 Ga0495627_001244 Ga0495627_001244_7868_8938 355
117 3300046458 Ga0495591_000415 Ga0495591_000415_31173_32243 355
118 3300046501 Ga0495607_0014523 Ga0495607_0014523_2090_3160 355
119 3300046507 Ga0495606_0000287 Ga0495606_0000287_85590_86672 355
120 3300046665 Ga0495661_0000243 Ga0495661_0000243_42585_43655 355
121 3300046810 Ga0495660_0001029 Ga0495660_0001029_8551_9621 355
122 3300047470 Ga0495681_0037746 Ga0495681_0037746_299_1369 355
123 3300048921 Ga0496118_0105132 Ga0496118_0105132_650_1720 355
124 3300048922 Ga0496119_0004814 Ga0496119_0004814_4851_5921 355
125 3300048924 Ga0496121_0001203 Ga0496121_0001203_39637_41046 355
126 3300048925 Ga0496122_0135191 Ga0496122_0135191_76_1146 355
127 3300048926 Ga0496123_0030479 Ga0496123_0030479_1028_2098 355
128 3300048927 Ga0496124_0004623 Ga0496124_0004623_7307_8377 355
129 3300048929 Ga0496126_0040647 Ga0496126_0040647_686_1756 355
130 3300050493 nmdc:mga0k408_42719_c1 nmdc:mga0k408_42719_c1_270_1349 355
131 3300050496 nmdc:mga07m45_44755_c1 nmdc:mga07m45_44755_c1_1153_2232 355
132 3300050507 nmdc:mga05p37_181373_c1 nmdc:mga05p37_181373_c1_1355_2443 355
133 3300050509 nmdc:mga0qj67_9270_c1 nmdc:mga0qj67_9270_c1_3984_5072 355
134 3300050510 nmdc:mga06r32_53087_c1 nmdc:mga06r32_53087_c1_1439_2527 355
135 3300053119 Ga0500595_008966 Ga0500595_008966_1483_2706 355

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

108

359

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vat-assembly5.cif.gz_L crystal structure of deacetylcephalosporin c acetyltransferase in complex with coenzyme a 0.8944 31 349
2vat-assembly4.cif.gz_F crystal structure of deacetylcephalosporin c acetyltransferase in complex with coenzyme a 0.8927 31 349
2vat-assembly2.cif.gz_B crystal structure of deacetylcephalosporin c acetyltransferase in complex with coenzyme a 0.8875 31 349
2vax-assembly2.cif.gz_E crystal structure of deacetylcephalosporin c acetyltransferase (cephalosporin c-soak) 0.8871 31 349
2vat-assembly6.cif.gz_C crystal structure of deacetylcephalosporin c acetyltransferase in complex with coenzyme a 0.8856 31 349
ID Description Score Start End Superfamily
5w8oA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.876 31 352 3.40.50.1820
2vaxI00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8749 31 349 3.40.50.1820
af_Q2G2T4_1_322_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8658 29 348 3.40.50.1820
5efzB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8604 31 349 3.40.50.1820
af_Q10341_88_496_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8588 39 346 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A836ZKJ9-F1-model_v4 deleted 0.9964 20 355
AF-A0A836ZKJ9-F1-model_v4 deleted 0.9934 20 355
AF-X1WS60-F1-model_v4 deleted 0.9928 124 353
AF-A0A0P9QM92-F1-model_v4 Alpha/beta hydrolase fold protein 0.9914 154 355 GO:0004414
GO:0009086
GO:0009092
GO:0016787
AF-A0A2H3GE23-F1-model_v4 AB hydrolase-1 domain-containing protein 0.9907 106 214 GO:0004414
GO:0009086
GO:0009092

Feature Viewer

pLDDT pTM Quality
89.72 0.88 High
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Predicted Structure (AlphaFold2)

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