F162575

General Info

Members Datasets Scaffolds Average Seq Length
135 69 135 346

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100381333|Ga0070699_1003813331
Length 390
Sequence MKHILLLSLLILTVYSPQAIPSSQSAELQTITIMTHDSFAVGEEVVKTFEEANNAKVVFLQSGDAGAVLNKAILTKDAPLADLLYGIDNTFLSRALEADIFEAYDSPGLPEIHHEFKLDPSNRALPVDYGDVCINYDKAYFAENNLAVPQSLEELVKPEYKGLLVVENPATSSTGLAFLVATITHYGDAFTDYWRALKENGVVVVDGWETAYYTNFSGSSGHGPQPMVVSYGTSPAAEVIFAEKPLDDAPTASILGPDTCFRQIEFVGILKGTKQRALAEKFVDFVLSKQFQEDMPLQMFVYPVNPNAALPDEFVKYAQASEQTAVLSPEEIAANRDQWIQAWTDIVMKPATSSNPANTLPIFVGAILIVLAVFVVYWLYKHTSKKQVHK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
37 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
38 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
39 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
40 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
41 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
42 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
46 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
47 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
48 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
49 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
50 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
51 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
52 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
53 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
54 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
55 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
59 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
60 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
61 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
62 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
63 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
64 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
65 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
66 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
67 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
68 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
69 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.74
Rhizosphere 97.78
Stem 0
Stem Tuber 0
Unclassified 1.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2488962 2162886007 Bacteria 12449
2 Ga0065704_10071204 3300005289 Bacteria 12530
3 Ga0065707_10081813 3300005295 Bacteria 36984
4 Ga0065707_10104688 3300005295 Bacteria 2683
5 Ga0070701_10050781 3300005438 Bacteria 2149
6 Ga0070705_100162043 3300005440 Unclassified 1496
7 Ga0070700_100105734 3300005441 Bacteria 1862
8 Ga0070707_100050036 3300005468 Bacteria 4006
9 Ga0070698_100002370 3300005471 Bacteria 20791
10 Ga0070699_100002128 3300005518 Bacteria 17968
11 Ga0070699_100082013 3300005518 Bacteria 2811
12 Ga0070699_100381333 3300005518 Bacteria 1273
13 Ga0070699_100388099 3300005518 Bacteria 1261
14 Ga0070695_100039682 3300005545 Bacteria 2977
15 Ga0070696_100100747 3300005546 Unclassified 2070
16 Ga0070704_100022770 3300005549 Bacteria 4081
17 Ga0070702_100070407 3300005615 Bacteria 2064
18 Ga0068859_100010917 3300005617 Bacteria 9144
19 Ga0068870_10069511 3300005840 Bacteria 1916
20 Ga0068862_100009460 3300005844 Bacteria 8063
21 Ga0068862_100100111 3300005844 Bacteria 2534
22 Ga0081539_10004934 3300005985 Bacteria 14200
23 Ga0081539_10008876 3300005985 Bacteria 8587
24 Ga0075428_100144397 3300006844 Bacteria 2587
25 Ga0075430_100250425 3300006846 Bacteria 1468
26 Ga0075431_100012413 3300006847 Bacteria 8597
27 Ga0075431_100052300 3300006847 Bacteria 4211
28 Ga0075431_100221989 3300006847 Bacteria 1927
29 Ga0075433_10257754 3300006852 Bacteria 1547
30 Ga0075429_100023855 3300006880 Bacteria 5309
31 Ga0075429_100071458 3300006880 Bacteria 3021
32 Ga0097620_100010915 3300006931 Bacteria 9144
33 Ga0097620_100062907 3300006931 Bacteria 3741
34 Ga0111539_10036222 3300009094 Bacteria 5967
35 Ga0114129_10001409 3300009147 Bacteria 32415
36 Ga0114129_10003228 3300009147 Bacteria 22877
37 Ga0114129_10135618 3300009147 Bacteria 3377
38 Ga0114129_10461817 3300009147 Bacteria 1664
39 Ga0114129_10769835 3300009147 Bacteria 1231
40 Ga0105243_10052765 3300009148 Bacteria 3222
41 Ga0105242_10103280 3300009176 Bacteria 2418
42 Ga0105249_10030298 3300009553 Bacteria 4891
43 Ga0105249_10161314 3300009553 Bacteria 2167
44 Ga0105246_10035830 3300011119 Unclassified 3319
45 Ga0207684_10142978 3300025910 Bacteria 2057
46 Ga0207646_10043983 3300025922 Bacteria 4009
47 Ga0207708_10046216 3300026075 Bacteria 3316
48 Ga0207674_10380036 3300026116 Bacteria 1365
49 Ga0207675_100038251 3300026118 Bacteria 4477
50 Ga0268265_10085599 3300028380 Bacteria 2502
51 Ga0265318_10002437 3300028577 Bacteria 9954
52 Ga0265322_10007096 3300028654 Bacteria 3283
53 Ga0265320_10013310 3300031240 Bacteria 4737
54 Ga0265340_10002416 3300031247 Bacteria 10627
55 Ga0265331_10007532 3300031250 Bacteria 6290
56 Ga0265327_10008027 3300031251 Bacteria 7966
57 Ga0316579_10007648 3300031691 Bacteria 4472
58 Ga0316576_10090440 3300031727 Bacteria 2280
59 Ga0316578_10103211 3300031728 Bacteria 1710
60 Ga0307405_10194159 3300031731 Bacteria 1469
61 Ga0316577_10016799 3300031733 Bacteria 4038
62 Ga0316577_10059659 3300031733 Bacteria 2129
63 Ga0307413_10028137 3300031824 Unclassified 3125
64 Ga0316580_10058623 3300032139 Bacteria 1183
65 Ga0316582_0000085 3300036647 Bacteria 24544
66 Ga0316582_0069585 3300036647 Bacteria 2275
67 Ga0316582_0110211 3300036647 Unclassified 1831
68 Ga0316584_0182452 3300036712 Bacteria 1553
69 Ga0316581_0007084 3300037588 Bacteria 2992
70 Ga0436364_0159987 3300037853 Bacteria 4866
71 Ga0400485_05888 3300038735 Bacteria 3847
72 Ga0451577_0007382 3300042876 Bacteria 10792
73 Ga0451577_0008393 3300042876 Bacteria 10055
74 Ga0451577_0036924 3300042876 Bacteria 4399
75 Ga0451577_0160828 3300042876 Bacteria 2022
76 Ga0451577_0171701 3300042876 Bacteria 1954
77 Ga0453683_0005140 3300044673 Bacteria 9174
78 Ga0453683_0011424 3300044673 Bacteria 5850
79 Ga0453683_0018310 3300044673 Bacteria 4497
80 Ga0453683_0092556 3300044673 Bacteria 1895
81 Ga0453684_0000023 3300044712 Bacteria 857153
82 Ga0453684_0000053 3300044712 Bacteria 545350
83 Ga0453684_0000157 3300044712 Bacteria 304259
84 Ga0453684_0000162 3300044712 Bacteria 298154
85 Ga0453684_0001029 3300044712 Bacteria 89157
86 Ga0453684_0001219 3300044712 Bacteria 78962
87 Ga0453684_0002878 3300044712 Bacteria 40371
88 Ga0453684_0004305 3300044712 Bacteria 30334
89 Ga0453684_0015582 3300044712 Bacteria 11999
90 Ga0453684_0015890 3300044712 Bacteria 11837
91 Ga0453684_0016849 3300044712 Bacteria 11378
92 Ga0453684_0021947 3300044712 Bacteria 9501
93 Ga0453684_0027065 3300044712 Bacteria 8244
94 Ga0453684_0036547 3300044712 Bacteria 6768
95 Ga0453684_0074998 3300044712 Bacteria 4255
96 Ga0453684_0083390 3300044712 Bacteria 3978
97 Ga0453684_0114959 3300044712 Bacteria 3261
98 Ga0453684_0115307 3300044712 Bacteria 3255
99 Ga0453684_0117686 3300044712 Unclassified 3215
100 Ga0453684_0124676 3300044712 Bacteria 3103
101 Ga0453684_0184042 3300044712 Bacteria 2450
102 Ga0453684_0203239 3300044712 Bacteria 2308
103 Ga0453684_0301886 3300044712 Bacteria 1820
104 Ga0453684_0397080 3300044712 Bacteria 1545
105 Ga0453684_0492122 3300044712 Bacteria 1359
106 Ga0453684_0717602 3300044712 Unclassified 1085
107 Ga0451576_0000676 3300045051 Bacteria 69445
108 Ga0451576_0002983 3300045051 Bacteria 23982
109 Ga0451576_0009071 3300045051 Bacteria 11582
110 Ga0451576_0020663 3300045051 Bacteria 7166
111 Ga0451576_0038442 3300045051 Bacteria 5064
112 Ga0451576_0107980 3300045051 Bacteria 2896
113 Ga0451576_0194984 3300045051 Unclassified 2115
114 Ga0451576_0419167 3300045051 Bacteria 1404
115 Ga0496102_0075926 3300048905 Bacteria 3090
116 Ga0501075_0146667 3300049591 Unclassified 1798
117 Ga0501076_0039415 3300049592 Unclassified 3709
118 Ga0501079_0149016 3300049741 Bacteria 1824
119 Ga0501080_0005556 3300049742 Bacteria 11262
120 Ga0501080_0337258 3300049742 Bacteria 1363
121 Ga0501280_007225 3300049776 Bacteria 1557
122 nmdc:mga05p37_115383_c1 3300050507 Bacteria 3302
123 nmdc:mga05p37_7177_c1 3300050507 Bacteria 13138
124 nmdc:mga05p37_76830_c1 3300050507 Bacteria 4111
125 nmdc:mga09592_32128_c1 3300050508 Bacteria 4375
126 nmdc:mga09592_40765_c1 3300050508 Bacteria 3902
127 nmdc:mga09592_59954_c1 3300050508 Bacteria 3217
128 nmdc:mga09592_73892_c1 3300050508 Bacteria 2897
129 nmdc:mga0qj67_196778_c1 3300050509 Bacteria 1638
130 nmdc:mga06r32_309609_c1 3300050510 Bacteria 1565
131 nmdc:mga06r32_69019_c1 3300050510 Bacteria 3415
132 nmdc:mga0a205_26939_c1 3300050515 Bacteria 2158
133 Ga0501084_0000183 3300054114 Bacteria 48760
134 Ga0501084_0041495 3300054114 Bacteria 3850
135 Ga0501084_0058041 3300054114 Bacteria 3238

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0000053 Ga0453684_0000053_204523_205578 308
2 3300044712 Ga0453684_0492122 Ga0453684_0492122_129_1244 309
3 3300045051 Ga0451576_0000676 Ga0451576_0000676_48937_50043 309
4 3300044673 Ga0453683_0018310 Ga0453683_0018310_1105_2223 310
5 3300038735 Ga0400485_05888 Ga0400485_05888_1425_2465 312
6 3300044712 Ga0453684_0036547 Ga0453684_0036547_3570_4712 312
7 3300044712 Ga0453684_0301886 Ga0453684_0301886_303_1412 313
8 3300031691 Ga0316579_10007648 Ga0316579_100076485 314
9 3300045051 Ga0451576_0002983 Ga0451576_0002983_21599_22756 314
10 3300044712 Ga0453684_0027065 Ga0453684_0027065_5781_6728 315
11 3300044712 Ga0453684_0717602 Ga0453684_0717602_15_962 315
12 3300005295 Ga0065707_10104688 Ga0065707_101046882 316
13 3300005438 Ga0070701_10050781 Ga0070701_100507812 316
14 3300005545 Ga0070695_100039682 Ga0070695_1000396821 316
15 3300005546 Ga0070696_100100747 Ga0070696_1001007472 316
16 3300009553 Ga0105249_10161314 Ga0105249_101613141 316
17 3300048905 Ga0496102_0075926 Ga0496102_0075926_120_1196 316
18 3300050508 nmdc:mga09592_73892_c1 nmdc:mga09592_73892_c1_742_1692 316
19 3300050510 nmdc:mga06r32_309609_c1 nmdc:mga06r32_309609_c1_533_1483 316
20 3300042876 Ga0451577_0160828 Ga0451577_0160828_676_1797 323
21 3300044712 Ga0453684_0001029 Ga0453684_0001029_52879_54000 323
22 3300045051 Ga0451576_0020663 Ga0451576_0020663_5912_6967 323
23 3300031733 Ga0316577_10059659 Ga0316577_100596592 324
24 3300036712 Ga0316584_0182452 Ga0316584_0182452_447_1475 324
25 3300044712 Ga0453684_0000023 Ga0453684_0000023_580357_581340 325
26 3300009147 Ga0114129_10769835 Ga0114129_107698352 326
27 3300044712 Ga0453684_0000162 Ga0453684_0000162_194044_195126 326
28 3300044712 Ga0453684_0114959 Ga0453684_0114959_1120_2232 326
29 3300044712 Ga0453684_0397080 Ga0453684_0397080_219_1256 326
30 3300006880 Ga0075429_100023855 Ga0075429_1000238552 327
31 3300044712 Ga0453684_0015890 Ga0453684_0015890_2550_3605 327
32 3300050508 nmdc:mga09592_32128_c1 nmdc:mga09592_32128_c1_2473_3558 327
33 3300006844 Ga0075428_100144397 Ga0075428_1001443972 328
34 3300009176 Ga0105242_10103280 Ga0105242_101032802 328
35 3300049591 Ga0501075_0146667 Ga0501075_0146667_608_1663 328
36 3300049592 Ga0501076_0039415 Ga0501076_0039415_1491_2531 328
37 3300054114 Ga0501084_0000183 Ga0501084_0000183_9922_10950 328
38 3300054114 Ga0501084_0058041 Ga0501084_0058041_2149_3189 328
39 3300028654 Ga0265322_10007096 Ga0265322_100070963 329
40 3300031251 Ga0265327_10008027 Ga0265327_100080272 329
41 3300031733 Ga0316577_10016799 Ga0316577_100167993 329
42 3300037588 Ga0316581_0007084 Ga0316581_0007084_1751_2839 329
43 3300037853 Ga0436364_0159987 Ga0436364_0159987_1928_3073 329
44 3300044673 Ga0453683_0005140 Ga0453683_0005140_1310_2341 329
45 3300045051 Ga0451576_0038442 Ga0451576_0038442_750_1781 329
46 3300006847 Ga0075431_100052300 Ga0075431_1000523002 330
47 3300006847 Ga0075431_100221989 Ga0075431_1002219892 330
48 3300006880 Ga0075429_100071458 Ga0075429_1000714584 330
49 3300031727 Ga0316576_10090440 Ga0316576_100904402 330
50 3300031728 Ga0316578_10103211 Ga0316578_101032112 330
51 3300032139 Ga0316580_10058623 Ga0316580_100586231 330
52 3300036647 Ga0316582_0000085 Ga0316582_0000085_7018_8076 330
53 3300036647 Ga0316582_0110211 Ga0316582_0110211_566_1603 330
54 3300045051 Ga0451576_0107980 Ga0451576_0107980_943_1971 330
55 3300049742 Ga0501080_0005556 Ga0501080_0005556_2669_3703 330
56 3300050508 nmdc:mga09592_59954_c1 nmdc:mga09592_59954_c1_1684_2733 330
57 3300050510 nmdc:mga06r32_69019_c1 nmdc:mga06r32_69019_c1_1731_2765 330
58 3300005518 Ga0070699_100002128 Ga0070699_1000021286 331
59 3300044712 Ga0453684_0001219 Ga0453684_0001219_67861_68910 331
60 3300044712 Ga0453684_0074998 Ga0453684_0074998_2122_3174 331
61 3300044712 Ga0453684_0124676 Ga0453684_0124676_830_1870 331
62 3300028577 Ga0265318_10002437 Ga0265318_100024377 332
63 3300031240 Ga0265320_10013310 Ga0265320_100133102 332
64 3300031247 Ga0265340_10002416 Ga0265340_100024168 332
65 3300031250 Ga0265331_10007532 Ga0265331_100075322 332
66 3300042876 Ga0451577_0007382 Ga0451577_0007382_3221_4270 332
67 3300042876 Ga0451577_0008393 Ga0451577_0008393_8740_9795 332
68 3300044673 Ga0453683_0011424 Ga0453683_0011424_2030_3085 332
69 3300044673 Ga0453683_0092556 Ga0453683_0092556_65_1120 332
70 3300044712 Ga0453684_0000157 Ga0453684_0000157_245160_246200 332
71 3300044712 Ga0453684_0002878 Ga0453684_0002878_29234_30283 332
72 3300044712 Ga0453684_0015582 Ga0453684_0015582_3019_4074 332
73 3300044712 Ga0453684_0016849 Ga0453684_0016849_7148_8209 332
74 3300044712 Ga0453684_0083390 Ga0453684_0083390_736_1776 332
75 3300044712 Ga0453684_0117686 Ga0453684_0117686_164_1219 332
76 3300044712 Ga0453684_0203239 Ga0453684_0203239_573_1673 332
77 3300045051 Ga0451576_0194984 Ga0451576_0194984_1017_2072 332
78 2162886007 SwRhRL2b_contig_2488962 SwRhRL2b_0384.00004300 333
79 3300005289 Ga0065704_10071204 Ga0065704_100712049 333
80 3300005295 Ga0065707_10081813 Ga0065707_100818139 333
81 3300005440 Ga0070705_100162043 Ga0070705_1001620431 333
82 3300005441 Ga0070700_100105734 Ga0070700_1001057342 333
83 3300005468 Ga0070707_100050036 Ga0070707_1000500365 333
84 3300005471 Ga0070698_100002370 Ga0070698_1000023702 333
85 3300005518 Ga0070699_100082013 Ga0070699_1000820132 333
86 3300005518 Ga0070699_100381333 Ga0070699_1003813331 333
87 3300005518 Ga0070699_100388099 Ga0070699_1003880991 333
88 3300005549 Ga0070704_100022770 Ga0070704_1000227702 333
89 3300005615 Ga0070702_100070407 Ga0070702_1000704072 333
90 3300005617 Ga0068859_100010917 Ga0068859_1000109174 333
91 3300005840 Ga0068870_10069511 Ga0068870_100695112 333
92 3300005844 Ga0068862_100009460 Ga0068862_1000094605 333
93 3300005844 Ga0068862_100100111 Ga0068862_1001001112 333
94 3300005985 Ga0081539_10004934 Ga0081539_100049349 333
95 3300005985 Ga0081539_10008876 Ga0081539_1000887611 333
96 3300006846 Ga0075430_100250425 Ga0075430_1002504252 333
97 3300006847 Ga0075431_100012413 Ga0075431_1000124132 333
98 3300006852 Ga0075433_10257754 Ga0075433_102577541 333
99 3300006931 Ga0097620_100010915 Ga0097620_1000109154 333
100 3300006931 Ga0097620_100062907 Ga0097620_1000629073 333
101 3300009094 Ga0111539_10036222 Ga0111539_100362222 333
102 3300009147 Ga0114129_10001409 Ga0114129_1000140917 333
103 3300009147 Ga0114129_10003228 Ga0114129_1000322814 333
104 3300009147 Ga0114129_10135618 Ga0114129_101356181 333
105 3300009147 Ga0114129_10461817 Ga0114129_104618172 333
106 3300009148 Ga0105243_10052765 Ga0105243_100527652 333
107 3300009553 Ga0105249_10030298 Ga0105249_100302985 333
108 3300011119 Ga0105246_10035830 Ga0105246_100358303 333
109 3300025910 Ga0207684_10142978 Ga0207684_101429782 333
110 3300025922 Ga0207646_10043983 Ga0207646_100439835 333
111 3300026075 Ga0207708_10046216 Ga0207708_100462162 333
112 3300026116 Ga0207674_10380036 Ga0207674_103800362 333
113 3300026118 Ga0207675_100038251 Ga0207675_1000382512 333
114 3300028380 Ga0268265_10085599 Ga0268265_100855992 333
115 3300031731 Ga0307405_10194159 Ga0307405_101941592 333
116 3300031824 Ga0307413_10028137 Ga0307413_100281372 333
117 3300036647 Ga0316582_0069585 Ga0316582_0069585_467_1561 333
118 3300042876 Ga0451577_0036924 Ga0451577_0036924_46_1104 333
119 3300042876 Ga0451577_0171701 Ga0451577_0171701_93_1271 333
120 3300044712 Ga0453684_0004305 Ga0453684_0004305_18056_19201 333
121 3300044712 Ga0453684_0021947 Ga0453684_0021947_5249_6307 333
122 3300044712 Ga0453684_0115307 Ga0453684_0115307_1912_2952 333
123 3300044712 Ga0453684_0184042 Ga0453684_0184042_97_1275 333
124 3300045051 Ga0451576_0009071 Ga0451576_0009071_5125_6183 333
125 3300045051 Ga0451576_0419167 Ga0451576_0419167_280_1338 333
126 3300049741 Ga0501079_0149016 Ga0501079_0149016_101_1159 333
127 3300049742 Ga0501080_0337258 Ga0501080_0337258_147_1205 333
128 3300049776 Ga0501280_007225 Ga0501280_007225_74_1207 333
129 3300050507 nmdc:mga05p37_115383_c1 nmdc:mga05p37_115383_c1_774_1823 333
130 3300050507 nmdc:mga05p37_7177_c1 nmdc:mga05p37_7177_c1_8147_9196 333
131 3300050507 nmdc:mga05p37_76830_c1 nmdc:mga05p37_76830_c1_1938_2996 333
132 3300050508 nmdc:mga09592_40765_c1 nmdc:mga09592_40765_c1_1240_2289 333
133 3300050509 nmdc:mga0qj67_196778_c1 nmdc:mga0qj67_196778_c1_386_1435 333
134 3300050515 nmdc:mga0a205_26939_c1 nmdc:mga0a205_26939_c1_227_1285 333
135 3300054114 Ga0501084_0041495 Ga0501084_0041495_2659_3717 333

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

44

322

0.85

PF13343

SBP_bac_6

Bacterial extracellular solute-binding protein

78

322

0.84

PF13531

SBP_bac_11

Bacterial extracellular solute-binding protein

31

294

0.72

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

35

293

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qry-assembly1.cif.gz_A periplasmic thiamin binding protein 0.8657 13 331
2qry-assembly1.cif.gz_A periplasmic thiamin binding protein 0.8579 13 331
4r6y-assembly1.cif.gz_A crystal structure of solute-binding protein stm0429 from salmonella enterica subsp. enterica serovar typhimurium str. lt2, target efi-510776, a closed conformation, in complex with glycerol and acetate 0.8415 13 333
4r6y-assembly1.cif.gz_A crystal structure of solute-binding protein stm0429 from salmonella enterica subsp. enterica serovar typhimurium str. lt2, target efi-510776, a closed conformation, in complex with glycerol and acetate 0.8315 13 333
1xvx-assembly1.cif.gz_A crystal structure of iron-loaded yersinia enterocolitica yfua 0.8275 13 330
ID Description Score Start End Superfamily
2qryD01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8843 13 300 3.40.190.10
1y4tD01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8714 15 294 3.40.190.10
af_P31550_123_326_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.865 114 331 3.40.190.10
2qryD01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.863 13 300 3.40.190.10
1y4tD01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8606 15 294 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A3D0CWP7-F1-model_v4 Thiamine ABC transporter substrate-binding protein 0.9874 18 333 GO:0015888
GO:0030288
GO:0030975
GO:0030976
AF-A0A524AVW0-F1-model_v4 Thiamine diphosphokinase (EC 2.7.6.2) 0.9864 11 333 GO:0004788
GO:0005524
GO:0006772
GO:0009229
GO:0015888
GO:0016301
GO:0030288
GO:0030975
GO:0030976
AF-A0A399YUM0-F1-model_v4 deleted 0.9838 63 333
AF-A0A3D0CWP7-F1-model_v4 Thiamine ABC transporter substrate-binding protein 0.9782 18 333 GO:0015888
GO:0030288
GO:0030975
GO:0030976
AF-A0A399YUM0-F1-model_v4 deleted 0.9661 63 333

Feature Viewer

pLDDT pTM Quality
93.72 0.89 High
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Predicted Structure (AlphaFold2)

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