F162487
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 135 | 120 | 270 | 364 |
Family's Representative Sequence
| Representative Sequence | 3300005445|Ga0070708_100108822|Ga0070708_1001088222 |
| Length | 394 |
| Sequence | MDARGLVPEWIRTLTPYPPGMPIEELERQLGIRDSIKLASNENPLGPSPKALAAIGAALGDLHRYPDGSAFYLKRRLAERLGVSPDEIVVGNGSNEIIELAVRAFLRPGDEAVMADQAFVIYRLVVQAAGGRSRIVPLRDFTHDLEAMAEAVTPRTRLVFLANPNNPTGTIYRRAAWETFLRALPPHLVVVADDAYAEYVEDPAYPDTLRERGDGSVPVLTLRTFSKLYGLAGLRVGYGVASAPVIDLLGRVRQPFNVNALALAGALGALDDEEHVRRTLALNREGMAFLVATFRRLGLESVPSAANFVLVRVGQAARVYQALLRRGVIVRPMEVYGFPEHVRVTVGLPEENQRFADSLAAVLHDAEDDSARETGARKSGEAEPREHRTGPRNR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 5 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 6 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 11 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 12 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 14 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 15 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 16 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 17 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 22 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 23 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 30 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 31 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 32 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 33 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 34 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 35 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 36 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 37 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 38 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 39 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 40 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 41 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 42 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 43 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 44 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 45 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 46 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 47 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 48 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 49 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 50 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 51 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 52 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 53 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 54 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 55 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 56 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 57 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 64 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 65 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 66 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 67 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 68 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 69 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 70 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 71 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 72 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 73 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 74 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 75 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 76 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 78 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 79 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 80 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 81 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 82 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 83 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 84 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 85 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 89 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 90 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 91 | 2571042143 | Paenibacillus graminis RSA19 | Isolate | Unclassified |
| 92 | 2571042588 | Paenibacillus zanthoxyli JH29 | Isolate | Unclassified |
| 93 | 2576861424 | Paenibacillus sabinae T27 | Isolate | Rhizosphere |
| 94 | 2579778775 | Paenibacillus durus P3L-5 | Isolate | Unclassified |
| 95 | 2600255286 | Paenibacillus sp. NFR01 | Isolate | Rhizoplane |
| 96 | 2619619294 | Paenibacillus durus ATCC 35681 | Isolate | Unclassified |
| 97 | 2643221543 | Paenibacillus sp. Root52 | Isolate | Unclassified |
| 98 | 2728368933 | Paenibacillus jilunlii DSM 23019 | Isolate | Rhizosphere |
| 99 | 2791355222 | Paenibacillus oryzae 1DrF-4 | Isolate | Unclassified |
| 100 | 2821111986 | Paenibacillus illinoisensis 582 | Isolate | Unclassified |
| 101 | 2857472729 | Cohnella sp. R-74144 | Isolate | Unclassified |
| 102 | 2864733723 | Paenibacillus sp. JGP012 | Isolate | Rhizosphere |
| 103 | 2881636855 | Paenibacillus sp. 7197 | Isolate | Rhizosphere |
| 104 | 2889042446 | Paenibacillus sp. 37 | Isolate | Rhizosphere |
| 105 | 2904490793 | Paenibacillus sp. 1295 | Isolate | Rhizosphere |
| 106 | 2907202186 | Paenibacillus sp. HJL G12 | Isolate | Unclassified |
| 107 | 2919160200 | Paenibacillus sp. 2003 | Isolate | Unclassified |
| 108 | 2931384279 | Paenibacillus sp. DR312 | Isolate | Rhizosphere |
| 109 | 2938649242 | Paenibacillus helianthi P26E | Isolate | Rhizosphere |
| 110 | 2945991243 | Paenibacillus sp. B21a W2I17 | Isolate | Rhizosphere |
| 111 | 2946053406 | Paenibacillus sp. W4I10 | Isolate | Rhizosphere |
| 112 | 2968558590 | Paenibacillus sp. P3E | Isolate | Rhizosphere |
| 113 | 2971403814 | Paenibacillus tritici LMG 29502 | Isolate | Unclassified |
| 114 | 2971511577 | Paenibacillus apii 7124 | Isolate | Rhizosphere |
| 115 | 2980176882 | Paenibacillus apii 7028 | Isolate | Rhizosphere |
| 116 | 2984527788 | Paenibacillus sp. SORGH_AS306 | Isolate | Aerial Root |
| 117 | 2984532647 | Paenibacillus sp. SORGH_AS338 | Isolate | Aerial Root |
| 118 | 2988225383 | Paenibacillus sp. P46E | Isolate | Rhizosphere |
| 119 | 2996632988 | Paenibacillus sp. P32E | Isolate | Rhizosphere |
| 120 | 8054465665 | Paenibacillus sonchi IIRRBNF1 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 77.78 |
| Metatranscriptomes | 0 |
| Isolates | 22.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.48 |
| Bulb | 0 |
| Endosphere | 0.74 |
| Nodule | 0 |
| Rhizoplane | 5.19 |
| Rhizosphere | 76.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.44 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070708_100108822 | 3300005445 | Bacteria | 2546 |
| 2 | Ga0065707_10083796 | 3300005295 | Bacteria | 8223 |
| 3 | Ga0070671_100069135 | 3300005355 | Bacteria | 2945 |
| 4 | Ga0070706_100145084 | 3300005467 | Bacteria | 2216 |
| 5 | Ga0070707_100043886 | 3300005468 | Bacteria | 4280 |
| 6 | Ga0070698_100285971 | 3300005471 | Bacteria | 1580 |
| 7 | Ga0070699_100001356 | 3300005518 | Bacteria | 22549 |
| 8 | Ga0070699_100013497 | 3300005518 | Bacteria | 7037 |
| 9 | Ga0070699_100250948 | 3300005518 | Bacteria | 1581 |
| 10 | Ga0070699_100362841 | 3300005518 | Bacteria | 1306 |
| 11 | Ga0070697_100154044 | 3300005536 | Bacteria | 1939 |
| 12 | Ga0070697_100320051 | 3300005536 | Bacteria | 1336 |
| 13 | Ga0070696_100051310 | 3300005546 | Bacteria | 2869 |
| 14 | Ga0068856_100140956 | 3300005614 | Bacteria | 2418 |
| 15 | Ga0081539_10018805 | 3300005985 | Bacteria | 4765 |
| 16 | Ga0070717_10047273 | 3300006028 | Bacteria | 3525 |
| 17 | Ga0075428_100077603 | 3300006844 | Bacteria | 3626 |
| 18 | Ga0075430_100046507 | 3300006846 | Unclassified | 3665 |
| 19 | Ga0075431_100004735 | 3300006847 | Bacteria | 13375 |
| 20 | Ga0075429_100089678 | 3300006880 | Unclassified | 2680 |
| 21 | Ga0075429_100138643 | 3300006880 | Bacteria | 2129 |
| 22 | Ga0111539_10155726 | 3300009094 | Bacteria | 2674 |
| 23 | Ga0105247_10213374 | 3300009101 | Bacteria | 1303 |
| 24 | Ga0114129_10290087 | 3300009147 | Bacteria | 2184 |
| 25 | Ga0114129_10477988 | 3300009147 | Bacteria | 1631 |
| 26 | Ga0114129_10788008 | 3300009147 | Bacteria | 1214 |
| 27 | Ga0157371_10127250 | 3300013102 | Bacteria | 1812 |
| 28 | Ga0213875_10011646 | 3300021388 | Bacteria | 4371 |
| 29 | Ga0209025_1007847 | 3300025294 | Bacteria | 7835 |
| 30 | Ga0207646_10103788 | 3300025922 | Bacteria | 2550 |
| 31 | Ga0207669_10086870 | 3300025937 | Bacteria | 2024 |
| 32 | Ga0207691_10074666 | 3300025940 | Bacteria | 3058 |
| 33 | Ga0207658_10019517 | 3300025986 | Bacteria | 4689 |
| 34 | Ga0207702_10015200 | 3300026078 | Bacteria | 6383 |
| 35 | Ga0207675_100188589 | 3300026118 | Bacteria | 1977 |
| 36 | Ga0207428_10018797 | 3300027907 | Bacteria | 5897 |
| 37 | Ga0265326_10004127 | 3300028558 | Bacteria | 4686 |
| 38 | Ga0265319_1002393 | 3300028563 | Bacteria | 10299 |
| 39 | Ga0265334_10006860 | 3300028573 | Bacteria | 4891 |
| 40 | Ga0265318_10005308 | 3300028577 | Bacteria | 6060 |
| 41 | Ga0265338_10008034 | 3300028800 | Bacteria | 12905 |
| 42 | Ga0316578_10053516 | 3300031728 | Bacteria | 2365 |
| 43 | Ga0307410_10010853 | 3300031852 | Bacteria | 5185 |
| 44 | Ga0307416_100060099 | 3300032002 | Bacteria | 3093 |
| 45 | Ga0307414_10141145 | 3300032004 | Bacteria | 1886 |
| 46 | Ga0307411_10008515 | 3300032005 | Bacteria | 5323 |
| 47 | Ga0307415_100070456 | 3300032126 | Bacteria | 2455 |
| 48 | Ga0373923_0020619 | 3300035111 | Bacteria | 2563 |
| 49 | Ga0373936_0018283 | 3300035113 | Bacteria | 2706 |
| 50 | Ga0373945_0036606 | 3300035116 | Bacteria | 1759 |
| 51 | Ga0373954_0022084 | 3300035118 | Bacteria | 2885 |
| 52 | Ga0373955_0078080 | 3300035172 | Bacteria | 1865 |
| 53 | Ga0373924_0119964 | 3300035410 | Bacteria | 1141 |
| 54 | Ga0373935_0002340 | 3300035692 | Bacteria | 10821 |
| 55 | Ga0373935_0054679 | 3300035692 | Bacteria | 2543 |
| 56 | Ga0373933_0022748 | 3300035724 | Bacteria | 3573 |
| 57 | Ga0373947_0005138 | 3300035725 | Bacteria | 7665 |
| 58 | Ga0373937_0152705 | 3300036401 | Bacteria | 2163 |
| 59 | Ga0373925_0021646 | 3300037068 | Bacteria | 4686 |
| 60 | Ga0436364_0631522 | 3300037853 | Bacteria | 3540 |
| 61 | Ga0436364_1482590 | 3300037853 | Bacteria | 6500 |
| 62 | Ga0436360_1268698 | 3300039438 | Bacteria | 2176 |
| 63 | Ga0436363_1186931 | 3300039450 | Bacteria | 1689 |
| 64 | Ga0453683_0000659 | 3300044673 | Bacteria | 36936 |
| 65 | Ga0451576_0032757 | 3300045051 | Bacteria | 5527 |
| 66 | Ga0495580_0087261 | 3300046472 | Bacteria | 2173 |
| 67 | Ga0495594_0059846 | 3300046499 | Bacteria | 2107 |
| 68 | Ga0495621_0000331 | 3300046539 | Bacteria | 11524 |
| 69 | Ga0495658_0154390 | 3300046683 | Bacteria | 1412 |
| 70 | Ga0495660_0006984 | 3300046810 | Bacteria | 6655 |
| 71 | Ga0495602_0050153 | 3300048088 | Bacteria | 3732 |
| 72 | Ga0496100_0038213 | 3300048903 | Bacteria | 3041 |
| 73 | Ga0496104_0166853 | 3300048907 | Bacteria | 2111 |
| 74 | Ga0496104_0354473 | 3300048907 | Bacteria | 1380 |
| 75 | Ga0496112_0347039 | 3300048915 | Bacteria | 1427 |
| 76 | Ga0496114_0396031 | 3300048917 | Bacteria | 1223 |
| 77 | Ga0496115_0256815 | 3300048918 | Bacteria | 1438 |
| 78 | Ga0496116_0007408 | 3300048919 | Bacteria | 9740 |
| 79 | Ga0496116_0067050 | 3300048919 | Bacteria | 2294 |
| 80 | Ga0496116_0118692 | 3300048919 | Bacteria | 1536 |
| 81 | Ga0496122_0041277 | 3300048925 | Bacteria | 3651 |
| 82 | Ga0496122_0066610 | 3300048925 | Bacteria | 2600 |
| 83 | Ga0496123_0005580 | 3300048926 | Bacteria | 12581 |
| 84 | Ga0496125_0002322 | 3300048928 | Bacteria | 25053 |
| 85 | Ga0501033_0000696 | 3300049570 | Bacteria | 31087 |
| 86 | Ga0501034_0008946 | 3300049571 | Bacteria | 10527 |
| 87 | Ga0501072_0082729 | 3300049588 | Bacteria | 2545 |
| 88 | Ga0501075_0006150 | 3300049591 | Bacteria | 8252 |
| 89 | Ga0501075_0119360 | 3300049591 | Unclassified | 2006 |
| 90 | Ga0501075_0251172 | 3300049591 | Bacteria | 1348 |
| 91 | Ga0501080_0088452 | 3300049742 | Unclassified | 2878 |
| 92 | Ga0501081_0229665 | 3300049743 | Bacteria | 1351 |
| 93 | Ga0501035_0025448 | 3300049822 | Bacteria | 5426 |
| 94 | nmdc:mga05p37_671187_c1 | 3300050507 | Bacteria | 1157 |
| 95 | nmdc:mga09592_108990_c1 | 3300050508 | Unclassified | 2375 |
| 96 | nmdc:mga0qj67_67263_c1 | 3300050509 | Bacteria | 2854 |
| 97 | nmdc:mga06r32_64493_c1 | 3300050510 | Unclassified | 3532 |
| 98 | nmdc:mga0n895_188970_c1 | 3300050512 | Bacteria | 2091 |
| 99 | nmdc:mga0rr50_39231_c1 | 3300050513 | Bacteria | 3433 |
| 100 | Ga0495601_0020731 | 3300053077 | Bacteria | 4017 |
| 101 | Ga0495612_0013529 | 3300053078 | Bacteria | 3286 |
| 102 | Ga0495619_0015831 | 3300053085 | Bacteria | 4774 |
| 103 | Ga0501084_0103117 | 3300054114 | Bacteria | 2396 |
| 104 | Ga0501082_0133390 | 3300060353 | Bacteria | 2155 |
| 105 | Ga0530510_0244552 | 3300061734 | Bacteria | 1336 |
| 106 | 2571531771 | 2571042143 | Bacteria | 6986194 |
| 107 | 2573039502 | 2571042588 | Bacteria | 5045676 |
| 108 | 2578337695 | 2576861424 | Bacteria | 5270569 |
| 109 | 2580929953 | 2579778775 | Bacteria | 5360914 |
| 110 | 2601638774 | 2600255286 | Bacteria | 5390125 |
| 111 | 2621276034 | 2619619294 | Bacteria | 5575484 |
| 112 | 2643738379 | 2643221543 | Bacteria | 6628015 |
| 113 | 2728529555 | 2728368933 | Bacteria | 7044283 |
| 114 | 2793184473 | 2791355222 | Bacteria | 5898266 |
| 115 | 2821114313 | 2821111986 | Bacteria | 6894338 |
| 116 | 2857473999 | 2857472729 | Bacteria | 6568124 |
| 117 | 2864737436 | 2864733723 | Bacteria | 6770668 |
| 118 | 2881636959 | 2881636855 | Bacteria | 5205297 |
| 119 | 2889046420 | 2889042446 | Bacteria | 7618936 |
| 120 | 2904493323 | 2904490793 | Bacteria | 7046938 |
| 121 | 2907205205 | 2907202186 | Bacteria | 6632024 |
| 122 | 2919162615 | 2919160200 | Bacteria | 6929020 |
| 123 | 2931389869 | 2931384279 | Bacteria | 7299545 |
| 124 | 2938651835 | 2938649242 | Bacteria | 7118381 |
| 125 | 2945991440 | 2945991243 | Bacteria | 7008369 |
| 126 | 2946054135 | 2946053406 | Bacteria | 6978655 |
| 127 | 2968562835 | 2968558590 | Bacteria | 6956864 |
| 128 | 2971407815 | 2971403814 | Bacteria | 7370929 |
| 129 | 2971512296 | 2971511577 | Bacteria | 5404012 |
| 130 | 2980177392 | 2980176882 | Bacteria | 5397533 |
| 131 | 2984530052 | 2984527788 | Bacteria | 5288478 |
| 132 | 2984536157 | 2984532647 | Bacteria | 5288506 |
| 133 | 2988231966 | 2988225383 | Bacteria | 7221625 |
| 134 | 2996638191 | 2996632988 | Bacteria | 6921523 |
| 135 | 8054469551 | 8054465665 | Bacteria | 7323556 |
| 136 | Ga0070708_100108822 | |||
| 137 | Ga0065707_10083796 | |||
| 138 | Ga0070671_100069135 | |||
| 139 | Ga0070706_100145084 | |||
| 140 | Ga0070707_100043886 | |||
| 141 | Ga0070698_100285971 | |||
| 142 | Ga0070699_100001356 | |||
| 143 | Ga0070699_100013497 | |||
| 144 | Ga0070699_100250948 | |||
| 145 | Ga0070699_100362841 | |||
| 146 | Ga0070697_100154044 | |||
| 147 | Ga0070697_100320051 | |||
| 148 | Ga0070696_100051310 | |||
| 149 | Ga0068856_100140956 | |||
| 150 | Ga0081539_10018805 | |||
| 151 | Ga0070717_10047273 | |||
| 152 | Ga0075428_100077603 | |||
| 153 | Ga0075430_100046507 | |||
| 154 | Ga0075431_100004735 | |||
| 155 | Ga0075429_100089678 | |||
| 156 | Ga0075429_100138643 | |||
| 157 | Ga0111539_10155726 | |||
| 158 | Ga0105247_10213374 | |||
| 159 | Ga0114129_10290087 | |||
| 160 | Ga0114129_10477988 | |||
| 161 | Ga0114129_10788008 | |||
| 162 | Ga0157371_10127250 | |||
| 163 | Ga0213875_10011646 | |||
| 164 | Ga0209025_1007847 | |||
| 165 | Ga0207646_10103788 | |||
| 166 | Ga0207669_10086870 | |||
| 167 | Ga0207691_10074666 | |||
| 168 | Ga0207658_10019517 | |||
| 169 | Ga0207702_10015200 | |||
| 170 | Ga0207675_100188589 | |||
| 171 | Ga0207428_10018797 | |||
| 172 | Ga0265326_10004127 | |||
| 173 | Ga0265319_1002393 | |||
| 174 | Ga0265334_10006860 | |||
| 175 | Ga0265318_10005308 | |||
| 176 | Ga0265338_10008034 | |||
| 177 | Ga0316578_10053516 | |||
| 178 | Ga0307410_10010853 | |||
| 179 | Ga0307416_100060099 | |||
| 180 | Ga0307414_10141145 | |||
| 181 | Ga0307411_10008515 | |||
| 182 | Ga0307415_100070456 | |||
| 183 | Ga0373923_0020619 | |||
| 184 | Ga0373936_0018283 | |||
| 185 | Ga0373945_0036606 | |||
| 186 | Ga0373954_0022084 | |||
| 187 | Ga0373955_0078080 | |||
| 188 | Ga0373924_0119964 | |||
| 189 | Ga0373935_0002340 | |||
| 190 | Ga0373935_0054679 | |||
| 191 | Ga0373933_0022748 | |||
| 192 | Ga0373947_0005138 | |||
| 193 | Ga0373937_0152705 | |||
| 194 | Ga0373925_0021646 | |||
| 195 | Ga0436364_0631522 | |||
| 196 | Ga0436364_1482590 | |||
| 197 | Ga0436360_1268698 | |||
| 198 | Ga0436363_1186931 | |||
| 199 | Ga0453683_0000659 | |||
| 200 | Ga0451576_0032757 | |||
| 201 | Ga0495580_0087261 | |||
| 202 | Ga0495594_0059846 | |||
| 203 | Ga0495621_0000331 | |||
| 204 | Ga0495658_0154390 | |||
| 205 | Ga0495660_0006984 | |||
| 206 | Ga0495602_0050153 | |||
| 207 | Ga0496100_0038213 | |||
| 208 | Ga0496104_0166853 | |||
| 209 | Ga0496104_0354473 | |||
| 210 | Ga0496112_0347039 | |||
| 211 | Ga0496114_0396031 | |||
| 212 | Ga0496115_0256815 | |||
| 213 | Ga0496116_0007408 | |||
| 214 | Ga0496116_0067050 | |||
| 215 | Ga0496116_0118692 | |||
| 216 | Ga0496122_0041277 | |||
| 217 | Ga0496122_0066610 | |||
| 218 | Ga0496123_0005580 | |||
| 219 | Ga0496125_0002322 | |||
| 220 | Ga0501033_0000696 | |||
| 221 | Ga0501034_0008946 | |||
| 222 | Ga0501072_0082729 | |||
| 223 | Ga0501075_0006150 | |||
| 224 | Ga0501075_0119360 | |||
| 225 | Ga0501075_0251172 | |||
| 226 | Ga0501080_0088452 | |||
| 227 | Ga0501081_0229665 | |||
| 228 | Ga0501035_0025448 | |||
| 229 | nmdc:mga05p37_671187_c1 | |||
| 230 | nmdc:mga09592_108990_c1 | |||
| 231 | nmdc:mga0qj67_67263_c1 | |||
| 232 | nmdc:mga06r32_64493_c1 | |||
| 233 | nmdc:mga0n895_188970_c1 | |||
| 234 | nmdc:mga0rr50_39231_c1 | |||
| 235 | Ga0495601_0020731 | |||
| 236 | Ga0495612_0013529 | |||
| 237 | Ga0495619_0015831 | |||
| 238 | Ga0501084_0103117 | |||
| 239 | Ga0501082_0133390 | |||
| 240 | Ga0530510_0244552 | |||
| 241 | 2571531771 | |||
| 242 | 2573039502 | |||
| 243 | 2578337695 | |||
| 244 | 2580929953 | |||
| 245 | 2601638774 | |||
| 246 | 2621276034 | |||
| 247 | 2643738379 | |||
| 248 | 2728529555 | |||
| 249 | 2793184473 | |||
| 250 | 2821114313 | |||
| 251 | 2857473999 | |||
| 252 | 2864737436 | |||
| 253 | 2881636959 | |||
| 254 | 2889046420 | |||
| 255 | 2904493323 | |||
| 256 | 2907205205 | |||
| 257 | 2919162615 | |||
| 258 | 2931389869 | |||
| 259 | 2938651835 | |||
| 260 | 2945991440 | |||
| 261 | 2946054135 | |||
| 262 | 2968562835 | |||
| 263 | 2971407815 | |||
| 264 | 2971512296 | |||
| 265 | 2980177392 | |||
| 266 | 2984530052 | |||
| 267 | 2984536157 | |||
| 268 | 2988231966 | |||
| 269 | 2996638191 | |||
| 270 | 8054469551 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3get-assembly1.cif.gz_A | crystal structure of putative histidinol-phosphate aminotransferase (np_281508.1) from campylobacter jejuni at 2.01 a resolution | 0.9476 | 7 | 362 |
| 3get-assembly1.cif.gz_B | crystal structure of putative histidinol-phosphate aminotransferase (np_281508.1) from campylobacter jejuni at 2.01 a resolution | 0.9401 | 7 | 362 |
| 3ly1-assembly1.cif.gz_B | crystal structure of putative histidinol-phosphate aminotransferase (yp_050345.1) from erwinia carotovora atroseptica scri1043 at 1.80 a resolution | 0.936 | 34 | 366 |
| 4r5z-assembly2.cif.gz_D | crystal structure of rv3772 encoded aminotransferase | 0.9334 | 7 | 364 |
| 3get-assembly1.cif.gz_B | crystal structure of putative histidinol-phosphate aminotransferase (np_281508.1) from campylobacter jejuni at 2.01 a resolution | 0.925 | 7 | 362 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2G087_68_261_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9823 | 74 | 265 | 3.40.640.10 |
| af_Q2G087_68_261_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9673 | 74 | 265 | 3.40.640.10 |
| 4r5zC02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9506 | 47 | 270 | 3.40.640.10 |
| 3getB02 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9481 | 271 | 362 | 3.90.1150.10 |
| 4wbtB02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9428 | 47 | 271 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A661T615-F1-model_v4 | Histidinol-phosphate transaminase (EC 2.6.1.9) | 0.9905 | 64 | 361 |
GO:0000105
GO:0004400 GO:0030170 |
| AF-A0A7C7QLY6-F1-model_v4 | Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) | 0.9895 | 7 | 363 |
GO:0000105
GO:0004400 GO:0030170 |
| AF-A0A1F9KUD8-F1-model_v4 | Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) | 0.9869 | 1 | 365 |
GO:0000105
GO:0004400 GO:0030170 |
| AF-A0A2S8K440-F1-model_v4 | deleted | 0.9857 | 62 | 214 |
|
| AF-A0A139CU14-F1-model_v4 | histidinol-phosphate transaminase (EC 2.6.1.9) | 0.9842 | 7 | 265 |
GO:0000105
GO:0004400 GO:0030170 |