F161632

General Info

Members Datasets Scaffolds Average Seq Length
134 120 268 232

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8003830390|8003832722
Length 256
Sequence RWPVAKREAASPGDGPWEGARVAQRRALVVRGGWERHQPVKATELFIPFLRRSGYAVRVEESTEIYADVAEMADTDLVVQCVTMSQITSDEVAGLSAAVIAGTGFTGWHGGIVDSFRASSEYLHLVGGQFATHPGKEPCERRGGAEDNFLPHTVRITDLGREHPITAGIEDFDLATEQYWVLHDDLIDVLATTTHPTQAWHPWHRPVTSPAIWTRMWGAGRIVVTTPGHSLDVLEHPSVRTVVERGMVWATRIASA

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
6 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
7 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
8 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
16 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
17 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
18 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
19 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
20 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
21 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
25 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
26 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
27 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
28 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
29 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
30 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
31 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
32 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
33 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
34 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
37 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
38 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
39 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
40 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
41 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
42 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
43 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
44 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
45 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
46 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
47 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
48 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
49 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
50 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
51 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
52 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
53 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
54 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
55 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
56 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
57 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
58 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
59 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
60 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
61 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
62 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
63 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
69 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
70 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
71 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
73 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
74 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
75 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
76 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
77 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
78 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
79 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
80 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
81 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
82 2643221649 Leifsonia sp. Root4 Isolate Unclassified
83 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
84 2773857759 Microbacterium sp. 1294 Isolate Unclassified
85 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
86 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
87 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
88 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
89 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
90 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
91 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
92 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
93 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
94 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
95 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
96 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
97 2858882152 Micromonospora noduli MED15 Isolate Nodule
98 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
99 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
100 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
101 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
102 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
103 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
104 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
105 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
106 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
107 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
108 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
109 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
110 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
111 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
112 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
113 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
114 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
115 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
116 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
117 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
118 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
119 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
120 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 69.4
Metatranscriptomes 0
Isolates 30.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.7
Nodule 3.73
Rhizoplane 5.22
Rhizosphere 52.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10096134 3300003322 Bacteria 1845
2 rootH1_10241905 3300003323 Bacteria 2907
3 Ga0065714_10065659 3300005288 Bacteria 8978
4 Ga0065714_10137078 3300005288 Bacteria 1200
5 Ga0070667_100421382 3300005367 Bacteria 1217
6 Ga0070665_100203373 3300005548 Bacteria 1981
7 Ga0070665_100324275 3300005548 Bacteria 1544
8 Ga0068859_101280621 3300005617 Bacteria 808
9 Ga0068858_100026840 3300005842 Bacteria 5349
10 Ga0068860_100140964 3300005843 Bacteria 2317
11 Ga0081540_1078098 3300005983 Bacteria 1502
12 Ga0075365_10013211 3300006038 Bacteria 4927
13 Ga0075363_100008575 3300006048 Bacteria 4768
14 Ga0075367_10003771 3300006178 Bacteria 7302
15 Ga0075367_10019260 3300006178 Bacteria 3782
16 Ga0075370_10046854 3300006353 Bacteria 2447
17 Ga0097620_101280490 3300006931 Bacteria 808
18 Ga0157369_10902220 3300013105 Bacteria 906
19 Ga0157375_10939097 3300013308 Bacteria 1007
20 Ga0182008_10004495 3300014497 Bacteria 8146
21 Ga0182007_10000273 3300015262 Bacteria 34091
22 Ga0182005_1030298 3300015265 Bacteria 1474
23 Ga0183367_1018 3300015688 Bacteria 114450
24 Ga0207658_10124239 3300025986 Bacteria 2063
25 Ga0207703_10045939 3300026035 Bacteria 3515
26 Ga0268264_10023484 3300028381 Bacteria 5029
27 Ga0307513_10553946 3300031456 Bacteria 862
28 Ga0307509_10130705 3300031507 Bacteria 2467
29 Ga0307508_10003366 3300031616 Bacteria 16209
30 Ga0307405_10224420 3300031731 Bacteria 1381
31 Ga0307412_10422292 3300031911 Bacteria 1091
32 Ga0307414_10050692 3300032004 Bacteria 2877
33 Ga0307415_100040533 3300032126 Bacteria 3086
34 Ga0307507_10017563 3300033179 Bacteria 8209
35 Ga0373935_0029585 3300035692 Bacteria 3390
36 Ga0395899_0159107 3300037312 Bacteria 1597
37 Ga0395898_0001728 3300037466 Bacteria 28892
38 Ga0395898_0005929 3300037466 Bacteria 13128
39 Ga0395901_0233636 3300038443 Bacteria 1919
40 Ga0439438_047559 3300041405 Bacteria 1099
41 Ga0451837_1242339 3300041494 Bacteria 1701
42 Ga0451853_2053564 3300041512 Bacteria 1529
43 Ga0439433_0008516 3300041999 Bacteria 2226
44 Ga0439455_0016098 3300042012 Bacteria 1725
45 Ga0439457_000547 3300042014 Bacteria 10976
46 Ga0450903_000522 3300042138 Bacteria 8046
47 Ga0450906_021727 3300042145 Bacteria 1146
48 Ga0439458_0041948 3300042157 Bacteria 1112
49 Ga0466965_0009827 3300044683 Bacteria 4449
50 Ga0466963_0014043 3300044694 Bacteria 4934
51 Ga0466963_0332066 3300044694 Bacteria 1070
52 Ga0466957_0455456 3300044842 Bacteria 882
53 Ga0466960_0101333 3300044901 Bacteria 1483
54 Ga0466967_0682984 3300045976 Bacteria 1016
55 Ga0495638_0060606 3300046460 Bacteria 2340
56 Ga0495632_0008633 3300046519 Bacteria 6223
57 Ga0495656_0169390 3300046615 Bacteria 1067
58 Ga0495685_002425 3300047447 Bacteria 5840
59 Ga0496102_0573924 3300048905 Bacteria 1051
60 Ga0496104_0060494 3300048907 Bacteria 3588
61 Ga0496108_0000015 3300048911 Bacteria 243282
62 Ga0496109_0111308 3300048912 Bacteria 2546
63 Ga0496114_0185822 3300048917 Bacteria 1816
64 Ga0496114_0387471 3300048917 Bacteria 1237
65 Ga0496115_0032124 3300048918 Bacteria 4141
66 Ga0496117_0000071 3300048920 Bacteria 242170
67 Ga0496117_0111451 3300048920 Bacteria 1703
68 Ga0496117_0257450 3300048920 Bacteria 948
69 Ga0496122_0003533 3300048925 Bacteria 20458
70 Ga0496122_0016392 3300048925 Bacteria 7013
71 Ga0496125_0003105 3300048928 Bacteria 20687
72 Ga0496125_0004625 3300048928 Bacteria 15733
73 Ga0496126_0633918 3300048929 Bacteria 838
74 Ga0501031_0123001 3300049568 Bacteria 1695
75 Ga0501037_0096293 3300049573 Bacteria 2139
76 Ga0501043_0067065 3300049579 Bacteria 2818
77 Ga0501043_0198303 3300049579 Bacteria 1559
78 Ga0501047_0019107 3300049581 Bacteria 6575
79 Ga0501070_0265991 3300049586 Bacteria 1401
80 Ga0501073_0143421 3300049589 Bacteria 1655
81 Ga0501080_0065670 3300049742 Bacteria 3375
82 Ga0501035_0016656 3300049822 Bacteria 6777
83 Ga0501035_0044010 3300049822 Bacteria 4022
84 Ga0501044_0017724 3300049823 Bacteria 7638
85 Ga0501044_0020732 3300049823 Bacteria 7016
86 nmdc:mga03n38_19730_c1 3300050490 Bacteria 2683
87 nmdc:mga0yw44_49278_c2 3300050492 Bacteria 2283
88 nmdc:mga06z11_34208_c1 3300050494 Bacteria 2493
89 nmdc:mga06z11_4902_c1 3300050494 Bacteria 5311
90 nmdc:mga04h51_16890_c1 3300050495 Bacteria 2125
91 nmdc:mga07m45_36872_c1 3300050496 Bacteria 2276
92 Ga0500600_0129090 3300053149 Bacteria 1290
93 Ga0500616_0000010 3300053153 Bacteria 761410
94 8003832722 8003830390 Bacteria 6541657
95 2585306445 2582581313 Bacteria 10042643
96 2644277970 2643221649 Bacteria 3867359
97 2772642103 2772190715 Bacteria 6959372
98 2774382801 2773857759 Bacteria 2963774
99 2785366538 2784746768 Bacteria 10036182
100 2786667596 2786546132 Bacteria 10419719
101 2808628873 2808606306 Bacteria 3608896
102 2812360875 2811994879 Bacteria 9313447
103 2821271598 2821268502 Bacteria 3750023
104 2832006279 2832004796 Bacteria 6538017
105 2852639403 2852635781 Bacteria 8251373
106 2852648377 2852646457 Bacteria 3408613
107 2855676044 2855670206 Bacteria 7120389
108 2855678711 2855676851 Bacteria 7063653
109 2857290991 2857288857 Bacteria 7189066
110 2858850539 2858848962 Bacteria 6963058
111 2858882888 2858882152 Bacteria 7230291
112 2858895057 2858888857 Bacteria 7060307
113 2858900061 2858895516 Bacteria 7378898
114 2862281585 2862281513 Bacteria 9621493
115 2866070981 2866065130 Bacteria 6518152
116 2869049941 2869048445 Bacteria 6875584
117 2869065210 2869061728 Bacteria 7112407
118 2869068795 2869068681 Bacteria 7205615
119 2877684001 2877676314 Bacteria 9512378
120 2880490432 2880489317 Bacteria 7096270
121 2880502089 2880495981 Bacteria 7340502
122 2929230599 2929226422 Bacteria 7248583
123 2945970745 2945968032 Bacteria 4111363
124 2946042941 2946041624 Bacteria 4191385
125 2946064994 2946064051 Bacteria 8957905
126 2947232436 2947224130 Bacteria 9938529
127 2954673736 2954673503 Bacteria 9685905
128 2954690254 2954682443 Bacteria 9862841
129 8003877227 8003870546 Bacteria 7396674
130 8045832069 8045830549 Bacteria 4444727
131 8046355049 8046352972 Bacteria 3613806
132 8054708490 8054704163 Bacteria 7247792
133 8054734124 8054727385 Bacteria 7558670
134 8054735640 8054734606 Bacteria 6947278
135 rootL2_10096134
136 rootH1_10241905
137 Ga0065714_10065659
138 Ga0065714_10137078
139 Ga0070667_100421382
140 Ga0070665_100203373
141 Ga0070665_100324275
142 Ga0068859_101280621
143 Ga0068858_100026840
144 Ga0068860_100140964
145 Ga0081540_1078098
146 Ga0075365_10013211
147 Ga0075363_100008575
148 Ga0075367_10003771
149 Ga0075367_10019260
150 Ga0075370_10046854
151 Ga0097620_101280490
152 Ga0157369_10902220
153 Ga0157375_10939097
154 Ga0182008_10004495
155 Ga0182007_10000273
156 Ga0182005_1030298
157 Ga0183367_1018
158 Ga0207658_10124239
159 Ga0207703_10045939
160 Ga0268264_10023484
161 Ga0307513_10553946
162 Ga0307509_10130705
163 Ga0307508_10003366
164 Ga0307405_10224420
165 Ga0307412_10422292
166 Ga0307414_10050692
167 Ga0307415_100040533
168 Ga0307507_10017563
169 Ga0373935_0029585
170 Ga0395899_0159107
171 Ga0395898_0001728
172 Ga0395898_0005929
173 Ga0395901_0233636
174 Ga0439438_047559
175 Ga0451837_1242339
176 Ga0451853_2053564
177 Ga0439433_0008516
178 Ga0439455_0016098
179 Ga0439457_000547
180 Ga0450903_000522
181 Ga0450906_021727
182 Ga0439458_0041948
183 Ga0466965_0009827
184 Ga0466963_0014043
185 Ga0466963_0332066
186 Ga0466957_0455456
187 Ga0466960_0101333
188 Ga0466967_0682984
189 Ga0495638_0060606
190 Ga0495632_0008633
191 Ga0495656_0169390
192 Ga0495685_002425
193 Ga0496102_0573924
194 Ga0496104_0060494
195 Ga0496108_0000015
196 Ga0496109_0111308
197 Ga0496114_0185822
198 Ga0496114_0387471
199 Ga0496115_0032124
200 Ga0496117_0000071
201 Ga0496117_0111451
202 Ga0496117_0257450
203 Ga0496122_0003533
204 Ga0496122_0016392
205 Ga0496125_0003105
206 Ga0496125_0004625
207 Ga0496126_0633918
208 Ga0501031_0123001
209 Ga0501037_0096293
210 Ga0501043_0067065
211 Ga0501043_0198303
212 Ga0501047_0019107
213 Ga0501070_0265991
214 Ga0501073_0143421
215 Ga0501080_0065670
216 Ga0501035_0016656
217 Ga0501035_0044010
218 Ga0501044_0017724
219 Ga0501044_0020732
220 nmdc:mga03n38_19730_c1
221 nmdc:mga0yw44_49278_c2
222 nmdc:mga06z11_34208_c1
223 nmdc:mga06z11_4902_c1
224 nmdc:mga04h51_16890_c1
225 nmdc:mga07m45_36872_c1
226 Ga0500600_0129090
227 Ga0500616_0000010
228 8003832722
229 2585306445
230 2644277970
231 2772642103
232 2774382801
233 2785366538
234 2786667596
235 2808628873
236 2812360875
237 2821271598
238 2832006279
239 2852639403
240 2852648377
241 2855676044
242 2855678711
243 2857290991
244 2858850539
245 2858882888
246 2858895057
247 2858900061
248 2862281585
249 2866070981
250 2869049941
251 2869065210
252 2869068795
253 2877684001
254 2880490432
255 2880502089
256 2929230599
257 2945970745
258 2946042941
259 2946064994
260 2947232436
261 2954673736
262 2954690254
263 8003877227
264 8045832069
265 8046355049
266 8054708490
267 8054734124
268 8054735640

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06283

ThuA

Trehalose utilisation

26

250

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pxy-assembly1.cif.gz_A crystal structure of a putative thua-like protein (bacuni_01602) from bacteroides uniformis atcc 8492 at 1.50 a resolution 0.7982 2 219
4pxy-assembly1.cif.gz_A crystal structure of a putative thua-like protein (bacuni_01602) from bacteroides uniformis atcc 8492 at 1.50 a resolution 0.769 2 219
4e5v-assembly2.cif.gz_B crystal structure of a putative thua-like protein (parmer_02418) from parabacteroides merdae atcc 43184 at 1.75 a resolution 0.7558 1 219
5xik-assembly1.cif.gz_A crystal structure of toxoplasma gondii prolyl-trna synthetase (tgprs) in complex with tetrahydro quinazolinone febrifugine 0.7451 3 38
5xig-assembly1.cif.gz_D crystal structure of toxoplasma gondii prolyl-trna synthetase (tgprs) in complex with inhibitor 1 0.7352 3 39
ID Description Score Start End Superfamily
4pxyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7812 2 219 3.40.50.880
af_Q64637_26_205_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.777 1 35 3.40.50.2000
4pxyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7496 2 219 3.40.50.880
af_Q9CR25_265_367_3.40.50.11860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Diphthamide synthesis DPH1/DPH2 domain 3 0.7438 2 55 3.40.50.11860
1t0bA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.738 1 222 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A0M2HRE2-F1-model_v4 Trehalose utilization 0.985 2 222
AF-A0A3D2NF08-F1-model_v4 ThuA-like domain-containing protein 0.9835 2 222
AF-A0A1M3ABI5-F1-model_v4 deleted 0.9827 2 168
AF-A0A0K2RC67-F1-model_v4 ThuA-like domain-containing protein 0.9801 2 114
AF-W7T317-F1-model_v4 ThuA-like domain-containing protein 0.9785 2 221

Map