F160894

General Info

Members Datasets Scaffolds Average Seq Length
134 118 126 541

Family's Representative Sequence

Representative Sequence 3300046462|Ga0495651_0023212|Ga0495651_0023212_1366_3105
Length 579
Sequence VALPGFGPVASNVKKTRERALSNSKNCTAQNDAVDGTLLPSAHIDTFAKKHLPPKELWPVIKVSGIEDLEYPARLNAAVELLDRNVEAGSGSRPCLRTDHEVWSYRKLLEYANRLANLLVSHGLVRGERVLLRGANSPMLAACWFAVLKAGGIAVATMPQLRAREIAAMLAKARVRFALCAREHATELEKAQQSTPELEKVILYDDSAGADAHPLLLEFPAGFENVATSQDDVALIAFSSGTTGEPKATVHFHRDLLAVCDTFSKHVLVPEAEDIFCGSPPLAFTFGLGGLLLFPMRVGASTLLLPKISAEGLLGSIERHRCTICFTAPTLYRSLLELVPRFDLASLKKCVSAGEHLPLPVFEAWRQATGLSIIDGIGATEMLHIFISAAGKEIRPGATGKLVPGYEAIVVDEAGQPLAANTIGRLAVRGPTGCRYLNSPELQRKYVQDGWNITGDSYRIDDDGYFWYEGRTDDLIVSSGYKISAVEIEAVLTGHPAVAECAVIGAPNEERGEIVKAFVVLTGEVPADDLLRRELQDYVKSQIAPYKYPRAIEFVTELPRSSTGKLQRSRLRKQERGKQ

Samples

Sample ID Description Type Environment
1 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
2 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
3 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
4 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
5 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
6 2818991452 Burkholderia cepacia 561 Isolate Unclassified
7 2928170801 Burkholderia sp. 572 Isolate Unclassified
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
73 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
74 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
90 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
91 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
92 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
95 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
108 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
118 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.28
Metatranscriptomes 0.75
Isolates 5.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.73
Nodule 0
Rhizoplane 8.21
Rhizosphere 85.07
Stem 0
Stem Tuber 0
Unclassified 2.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055529_1002001 3300003763 Bacteria 4502
2 Ga0070658_10087243 3300005327 Bacteria 2568
3 Ga0070683_100014948 3300005329 Bacteria 6807
4 Ga0070660_100000089 3300005339 Bacteria 55361
5 Ga0070688_100087290 3300005365 Bacteria 2032
6 Ga0070659_100000060 3300005366 Bacteria 85656
7 Ga0070667_100107717 3300005367 Bacteria 2413
8 Ga0070709_10004621 3300005434 Bacteria 7434
9 Ga0070714_100049656 3300005435 Bacteria 3572
10 Ga0070714_100071720 3300005435 Bacteria 2996
11 Ga0070713_100040089 3300005436 Bacteria 3806
12 Ga0070711_100102162 3300005439 Bacteria 2088
13 Ga0070700_100000003 3300005441 Bacteria 261247
14 Ga0070685_10035047 3300005466 Bacteria 2830
15 Ga0070679_100091038 3300005530 Bacteria 3038
16 Ga0070665_100000113 3300005548 Bacteria 151435
17 Ga0068852_100009476 3300005616 Bacteria 7234
18 Ga0068858_100070444 3300005842 Bacteria 3241
19 Ga0068860_100001306 3300005843 Bacteria 27097
20 Ga0081540_1011625 3300005983 Bacteria 5870
21 Ga0081539_10005012 3300005985 Bacteria 13974
22 Ga0081539_10010127 3300005985 Bacteria 7732
23 Ga0075430_100008798 3300006846 Bacteria 8521
24 Ga0075434_100099263 3300006871 Bacteria 2917
25 Ga0068865_100076833 3300006881 Bacteria 2385
26 Ga0105245_10001736 3300009098 Bacteria 19859
27 Ga0105245_10088242 3300009098 Bacteria 2848
28 Ga0105237_10023763 3300009545 Bacteria 6275
29 Ga0105238_10007788 3300009551 Bacteria 10716
30 Ga0105239_10013154 3300010375 Bacteria 9194
31 Ga0157370_10028611 3300013104 Bacteria 5479
32 Ga0157372_10000440 3300013307 Bacteria 45823
33 Ga0157372_10060680 3300013307 Bacteria 4231
34 Ga0206353_11061162 3300020082 Bacteria 3632
35 Ga0209566_100769 3300025225 Bacteria 17231
36 Ga0209147_100021 3300025229 Bacteria 464719
37 Ga0207697_10018438 3300025315 Bacteria 2862
38 Ga0207680_10008201 3300025903 Bacteria 5120
39 Ga0207647_10003614 3300025904 Bacteria 11576
40 Ga0207699_10022885 3300025906 Bacteria 3393
41 Ga0207705_10051154 3300025909 Bacteria 2974
42 Ga0207695_10000467 3300025913 Bacteria 87766
43 Ga0207657_10000089 3300025919 Bacteria 86978
44 Ga0207694_10000065 3300025924 Bacteria 131061
45 Ga0207694_10015137 3300025924 Bacteria 5816
46 Ga0207694_10142274 3300025924 Bacteria 1929
47 Ga0207650_10010003 3300025925 Bacteria 6494
48 Ga0207687_10001948 3300025927 Bacteria 14202
49 Ga0207687_10081769 3300025927 Bacteria 2335
50 Ga0207664_10011964 3300025929 Bacteria 6195
51 Ga0207690_10000073 3300025932 Bacteria 88099
52 Ga0207711_10043927 3300025941 Bacteria 3813
53 Ga0207703_10012827 3300026035 Bacteria 6535
54 Ga0207678_10051880 3300026067 Bacteria 3540
55 Ga0207708_10000002 3300026075 Bacteria 411071
56 Ga0207683_10089069 3300026121 Bacteria 2746
57 Ga0207698_10003021 3300026142 Bacteria 10085
58 Ga0210002_1001050 3300027617 Bacteria 3817
59 Ga0268266_10002017 3300028379 Bacteria 22635
60 Ga0268264_10000591 3300028381 Bacteria 44006
61 Ga0307515_10032584 3300028794 Bacteria 8625
62 Ga0307513_10092412 3300031456 Bacteria 3080
63 Ga0307408_100008537 3300031548 Bacteria 6765
64 Ga0307405_10022697 3300031731 Bacteria 3552
65 Ga0307413_10001592 3300031824 Bacteria 8758
66 Ga0307410_10007837 3300031852 Bacteria 5877
67 Ga0307406_10004807 3300031901 Bacteria 7357
68 Ga0307407_10008305 3300031903 Bacteria 4758
69 Ga0307409_100051573 3300031995 Bacteria 3149
70 Ga0307416_100103840 3300032002 Bacteria 2482
71 Ga0307414_10002606 3300032004 Bacteria 9489
72 Ga0307411_10001366 3300032005 Bacteria 9875
73 Ga0307415_100006206 3300032126 Bacteria 6421
74 Ga0307415_100054661 3300032126 Bacteria 2727
75 Ga0373955_0020562 3300035172 Bacteria 3320
76 Ga0373937_0000227 3300036401 Bacteria 54658
77 Ga0373937_0047658 3300036401 Bacteria 3922
78 Ga0373937_0145367 3300036401 Bacteria 2219
79 Ga0373925_0013970 3300037068 Bacteria 5812
80 Ga0395900_0034476 3300037418 Bacteria 5212
81 Ga0395900_0083399 3300037418 Bacteria 3284
82 Ga0395898_0020381 3300037466 Bacteria 6733
83 Ga0395898_0052685 3300037466 Bacteria 3975
84 Ga0395905_0033976 3300037471 Bacteria 4790
85 Ga0395901_0055239 3300038443 Bacteria 4129
86 Ga0395901_0090793 3300038443 Bacteria 3197
87 Ga0395901_0108641 3300038443 Bacteria 2912
88 Ga0436360_0555764 3300039438 Bacteria 2741
89 Ga0451577_0049132 3300042876 Bacteria 3767
90 Ga0466970_0015940 3300044765 Bacteria 3869
91 Ga0466960_0038721 3300044901 Bacteria 2244
92 Ga0466959_0031337 3300045049 Bacteria 3935
93 Ga0466959_0038935 3300045049 Bacteria 3513
94 Ga0466967_0008831 3300045976 Bacteria 7428
95 Ga0495638_0007123 3300046460 Bacteria 8062
96 Ga0495651_0023212 3300046462 Bacteria 4824
97 Ga0495650_0015521 3300046471 Bacteria 3903
98 Ga0495605_0004161 3300046474 Bacteria 8523
99 Ga0495594_0007581 3300046499 Bacteria 5585
100 Ga0495642_0008531 3300046528 Bacteria 3921
101 Ga0495645_0032730 3300046543 Bacteria 3793
102 Ga0495670_0011040 3300046691 Bacteria 4440
103 Ga0495589_0007589 3300046794 Bacteria 5684
104 Ga0495674_0014525 3300047319 Bacteria 7368
105 Ga0495593_0039453 3300047673 Bacteria 2546
106 Ga0496102_0005061 3300048905 Bacteria 11159
107 Ga0496105_0158514 3300048908 Bacteria 1858
108 Ga0496107_0070930 3300048910 Bacteria 2531
109 Ga0496108_0108384 3300048911 Bacteria 2373
110 Ga0496110_0002912 3300048913 Bacteria 12954
111 Ga0496111_0002378 3300048914 Bacteria 11336
112 Ga0496112_0199279 3300048915 Bacteria 1962
113 Ga0501033_0021264 3300049570 Bacteria 4895
114 Ga0501048_0053696 3300049582 Bacteria 2864
115 Ga0501076_0018444 3300049592 Bacteria 5320
116 Ga0501079_0021108 3300049741 Bacteria 4979
117 Ga0501035_0115095 3300049822 Bacteria 2354
118 Ga0501044_0000231 3300049823 Bacteria 70134
119 nmdc:mga0n895_87433_c1 3300050512 Bacteria 3114
120 Ga0495601_0042563 3300053077 Bacteria 2850
121 Ga0495601_0046118 3300053077 Bacteria 2743
122 Ga0495619_0021998 3300053085 Bacteria 4076
123 Ga0500578_0031280 3300053086 Bacteria 3420
124 Ga0500616_0010381 3300053153 Bacteria 5575
125 Ga0501082_0029334 3300060353 Bacteria 4739
126 Ga0530510_0086172 3300061734 Bacteria 2288

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300061734 Ga0530510_0086172 Ga0530510_0086172_901_2277 457
2 3300037466 Ga0395898_0020381 Ga0395898_0020381_1524_3122 489
3 3300038443 Ga0395901_0090793 Ga0395901_0090793_675_2273 489
4 3300005365 Ga0070688_100087290 Ga0070688_1000872902 501
5 3300025315 Ga0207697_10018438 Ga0207697_100184382 501
6 3300028381 Ga0268264_10000591 Ga0268264_1000059132 501
7 3300049592 Ga0501076_0018444 Ga0501076_0018444_3190_4722 504
8 3300005329 Ga0070683_100014948 Ga0070683_1000149483 510
9 3300009098 Ga0105245_10001736 Ga0105245_1000173610 512
10 3300005616 Ga0068852_100009476 Ga0068852_1000094765 513
11 3300025904 Ga0207647_10003614 Ga0207647_100036146 513
12 3300026142 Ga0207698_10003021 Ga0207698_100030214 513
13 3300005339 Ga0070660_100000089 Ga0070660_10000008938 514
14 3300005366 Ga0070659_100000060 Ga0070659_1000000609 514
15 3300009545 Ga0105237_10023763 Ga0105237_100237635 514
16 3300025919 Ga0207657_10000089 Ga0207657_1000008967 514
17 3300025924 Ga0207694_10015137 Ga0207694_100151372 514
18 3300025932 Ga0207690_10000073 Ga0207690_1000007368 514
19 3300035172 Ga0373955_0020562 Ga0373955_0020562_1429_2985 515
20 3300036401 Ga0373937_0145367 Ga0373937_0145367_74_1630 515
21 3300037068 Ga0373925_0013970 Ga0373925_0013970_1425_2981 515
22 3300046499 Ga0495594_0007581 Ga0495594_0007581_3185_4741 515
23 3300050512 nmdc:mga0n895_87433_c1 nmdc:mga0n895_87433_c1_1134_2705 515
24 3300020082 Ga0206353_11061162 Ga0206353_110611622 518
25 3300009551 Ga0105238_10007788 Ga0105238_100077886 519
26 3300010375 Ga0105239_10013154 Ga0105239_100131546 519
27 iso_pu_bacteria 2675903059 2676479751 519
28 3300031548 Ga0307408_100008537 Ga0307408_1000085372 521
29 3300031731 Ga0307405_10022697 Ga0307405_100226973 521
30 3300031824 Ga0307413_10001592 Ga0307413_100015925 521
31 3300031852 Ga0307410_10007837 Ga0307410_100078372 521
32 3300031901 Ga0307406_10004807 Ga0307406_100048075 521
33 3300031903 Ga0307407_10008305 Ga0307407_100083052 521
34 3300032002 Ga0307416_100103840 Ga0307416_1001038402 521
35 3300032004 Ga0307414_10002606 Ga0307414_100026065 521
36 3300032005 Ga0307411_10001366 Ga0307411_100013663 521
37 3300032126 Ga0307415_100006206 Ga0307415_1000062066 521
38 3300027617 Ga0210002_1001050 Ga0210002_10010502 525
39 3300045976 Ga0466967_0008831 Ga0466967_0008831_2333_3919 526
40 3300060353 Ga0501082_0029334 Ga0501082_0029334_1737_3329 526
41 3300005985 Ga0081539_10010127 Ga0081539_100101271 528
42 3300013104 Ga0157370_10028611 Ga0157370_100286114 529
43 3300025927 Ga0207687_10081769 Ga0207687_100817692 529
44 iso_pu_bacteria 2599185239 2599737495 529
45 iso_pu_bacteria 2599185240 2599743086 529
46 iso_pu_bacteria 2599185355 2600205682 529
47 iso_pu_bacteria 2675903129 2676740979 529
48 iso_pu_bacteria 2818991452 2819636646 529
49 iso_pu_bacteria 2928170801 2928178281 529
50 iso_pu_bacteria 8021120328 8021124533 529
51 3300005466 Ga0070685_10035047 Ga0070685_100350472 531
52 3300005548 Ga0070665_100000113 Ga0070665_1000001132 531
53 3300005983 Ga0081540_1011625 Ga0081540_10116254 531
54 3300009098 Ga0105245_10088242 Ga0105245_100882422 531
55 3300028379 Ga0268266_10002017 Ga0268266_100020173 531
56 3300005367 Ga0070667_100107717 Ga0070667_1001077172 533
57 3300005530 Ga0070679_100091038 Ga0070679_1000910382 533
58 3300005842 Ga0068858_100070444 Ga0068858_1000704443 533
59 3300005843 Ga0068860_100001306 Ga0068860_10000130617 533
60 3300006881 Ga0068865_100076833 Ga0068865_1000768333 533
61 3300025225 Ga0209566_100769 Ga0209566_1007696 533
62 3300025229 Ga0209147_100021 Ga0209147_100021225 533
63 3300025913 Ga0207695_10000467 Ga0207695_100004676 533
64 3300026035 Ga0207703_10012827 Ga0207703_100128274 533
65 3300037418 Ga0395900_0083399 Ga0395900_0083399_133_1758 533
66 3300038443 Ga0395901_0108641 Ga0395901_0108641_66_1691 533
67 3300044765 Ga0466970_0015940 Ga0466970_0015940_1192_2805 533
68 3300044901 Ga0466960_0038721 Ga0466960_0038721_89_1714 533
69 3300036401 Ga0373937_0047658 Ga0373937_0047658_2096_3724 534
70 3300037471 Ga0395905_0033976 Ga0395905_0033976_722_2338 534
71 3300046543 Ga0495645_0032730 Ga0495645_0032730_1440_3065 534
72 3300053077 Ga0495601_0042563 Ga0495601_0042563_294_1922 534
73 3300013307 Ga0157372_10060680 Ga0157372_100606803 535
74 3300025924 Ga0207694_10142274 Ga0207694_101422742 535
75 3300025925 Ga0207650_10010003 Ga0207650_100100032 535
76 3300026067 Ga0207678_10051880 Ga0207678_100518802 535
77 3300032126 Ga0307415_100054661 Ga0307415_1000546611 535
78 3300049582 Ga0501048_0053696 Ga0501048_0053696_537_2165 535
79 3300049741 Ga0501079_0021108 Ga0501079_0021108_1313_2941 535
80 3300005441 Ga0070700_100000003 Ga0070700_10000000319 536
81 3300005985 Ga0081539_10005012 Ga0081539_100050122 536
82 3300013307 Ga0157372_10000440 Ga0157372_1000044032 536
83 3300026075 Ga0207708_10000002 Ga0207708_10000002159 536
84 3300028794 Ga0307515_10032584 Ga0307515_100325849 536
85 3300031456 Ga0307513_10092412 Ga0307513_100924123 536
86 3300037418 Ga0395900_0034476 Ga0395900_0034476_731_2377 536
87 3300037466 Ga0395898_0052685 Ga0395898_0052685_1468_3114 536
88 3300038443 Ga0395901_0055239 Ga0395901_0055239_42_1688 536
89 3300045049 Ga0466959_0031337 Ga0466959_0031337_1105_2727 536
90 3300045049 Ga0466959_0038935 Ga0466959_0038935_1394_3073 536
91 3300047673 Ga0495593_0039453 Ga0495593_0039453_648_2294 536
92 3300048915 Ga0496112_0199279 Ga0496112_0199279_235_1857 536
93 3300053085 Ga0495619_0021998 Ga0495619_0021998_2413_4059 536
94 3300053086 Ga0500578_0031280 Ga0500578_0031280_101_1747 536
95 3300053153 Ga0500616_0010381 Ga0500616_0010381_3544_5166 536
96 3300005434 Ga0070709_10004621 Ga0070709_100046214 538
97 3300005435 Ga0070714_100049656 Ga0070714_1000496562 538
98 3300005435 Ga0070714_100071720 Ga0070714_1000717202 538
99 3300005436 Ga0070713_100040089 Ga0070713_1000400893 538
100 3300005439 Ga0070711_100102162 Ga0070711_1001021622 538
101 3300006871 Ga0075434_100099263 Ga0075434_1000992634 538
102 3300025906 Ga0207699_10022885 Ga0207699_100228853 538
103 3300025927 Ga0207687_10001948 Ga0207687_1000194811 538
104 3300025929 Ga0207664_10011964 Ga0207664_100119643 538
105 3300036401 Ga0373937_0000227 Ga0373937_0000227_43866_45545 538
106 3300046462 Ga0495651_0023212 Ga0495651_0023212_1366_3105 538
107 3300048913 Ga0496110_0002912 Ga0496110_0002912_11220_12920 538
108 3300048914 Ga0496111_0002378 Ga0496111_0002378_8067_9767 538
109 3300053077 Ga0495601_0046118 Ga0495601_0046118_414_2093 538
110 3300025924 Ga0207694_10000065 Ga0207694_10000065121 539
111 3300039438 Ga0436360_0555764 Ga0436360_0555764_320_1987 539
112 3300005327 Ga0070658_10087243 Ga0070658_100872432 542
113 3300025903 Ga0207680_10008201 Ga0207680_100082012 542
114 3300025909 Ga0207705_10051154 Ga0207705_100511542 542
115 3300031995 Ga0307409_100051573 Ga0307409_1000515732 542
116 3300042876 Ga0451577_0049132 Ga0451577_0049132_32_1717 542
117 3300006846 Ga0075430_100008798 Ga0075430_1000087985 544
118 3300025941 Ga0207711_10043927 Ga0207711_100439273 544
119 3300026121 Ga0207683_10089069 Ga0207683_100890692 544
120 3300046460 Ga0495638_0007123 Ga0495638_0007123_5758_7398 544
121 3300046471 Ga0495650_0015521 Ga0495650_0015521_392_2032 544
122 3300046474 Ga0495605_0004161 Ga0495605_0004161_4061_5701 544
123 3300046528 Ga0495642_0008531 Ga0495642_0008531_1858_3498 544
124 3300046691 Ga0495670_0011040 Ga0495670_0011040_2673_4313 544
125 3300046794 Ga0495589_0007589 Ga0495589_0007589_1950_3590 544
126 3300047319 Ga0495674_0014525 Ga0495674_0014525_5162_6811 544
127 3300048905 Ga0496102_0005061 Ga0496102_0005061_1290_2930 544
128 3300048908 Ga0496105_0158514 Ga0496105_0158514_191_1831 544
129 3300048910 Ga0496107_0070930 Ga0496107_0070930_258_1898 544
130 3300048911 Ga0496108_0108384 Ga0496108_0108384_641_2281 544
131 3300003763 Ga0055529_1002001 Ga0055529_10020014 548
132 3300049570 Ga0501033_0021264 Ga0501033_0021264_1684_3375 548
133 3300049822 Ga0501035_0115095 Ga0501035_0115095_580_2226 548
134 3300049823 Ga0501044_0000231 Ga0501044_0000231_44138_45784 548

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

487

565

0.93

PF00501

AMP-binding

AMP-binding enzyme

82

436

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u5y-assembly1.cif.gz_D crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9482 455 547
3b7w-assembly1.cif.gz_A crystal structure of human acyl-coa synthetase medium-chain family member 2a, with l64p mutation 0.9161 31 546
6m2t-assembly1.cif.gz_A the crystal structure of benzoate coenzyme a ligase double mutant (h333a/i334a) in complex with 2-methyl-thiazole-5 carboxylate-amp 0.9151 33 543
2p20-assembly1.cif.gz_A acetyl-coa synthetase, r584a mutation 0.9112 35 548
2p2j-assembly1.cif.gz_A acetyl-coa synthetase, k609a mutation 0.9107 35 547
ID Description Score Start End Superfamily
3etcA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9918 443 527 3.30.300.30
3etcA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9803 443 527 3.30.300.30
af_Q2G294_455_568_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9724 444 545 3.30.300.30
af_P27550_518_652_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9618 444 543 3.30.300.30
af_O16481_410_514_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9595 444 545 3.30.300.30
ID Description Score Start End GO Terms
AF-K2ADA0-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 1.001 445 543 GO:0000166
GO:0004321
GO:0006633
GO:0006637
GO:0015645
AF-A0A6M0AQR2-F1-model_v4 Acetyl-coenzyme A synthetase 0.9719 461 548 GO:0003987
GO:0005829
GO:0006085
AF-K2ADA0-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9712 445 543 GO:0000166
GO:0004321
GO:0006633
GO:0006637
GO:0015645
AF-A0A535GR94-F1-model_v4 Acetyl-CoA synthetase 0.9326 445 541 GO:0003987
GO:0006085
AF-A0A2S4XRE7-F1-model_v4 2-aminobenzoate-CoA ligase 0.9265 1 171 GO:0016878
GO:0044550

Feature Viewer

pLDDT pTM Quality
89.14 0.88 High
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Predicted Structure (AlphaFold2)

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