F160285

General Info

Members Datasets Scaffolds Average Seq Length
134 106 268 297

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10025029|Ga0265338_100250297
Length 340
Sequence MTGTDANRGGGARGPVVVLAGGTGGAKLARGMLDVVGAEDLVVIANTCDDIEIYGSHVSPDPDLVSFWLADLIDERGWGIEGDTFEVMDALRRLGTNVWFNLGDRDLAWCLERKRMEAEGLRPTEALAHLNEAIGVRAGVLPMCDAPLRTLVRTESGWRDFQQFMVRDRAAGPVREVTFATPAQARLIVAGEQPPPSPKPSHSAQPTPEALEALAQARAVIVGPSNPVISIWPILHVLGEALARTPAAVVCVSPIVAGQVVKGPTAAFLAAYDQPASTAGVAAFYETVHPGLLDGIVSDETRESLESDLPTLRLDTMMSDAESRAAVATETLKFAVSLER

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
20 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
21 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
22 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
36 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
37 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
38 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
41 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
47 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
50 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
55 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
61 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
62 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
63 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
64 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
65 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
68 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
69 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
70 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
71 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
76 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
77 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
83 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
84 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
85 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
102 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
103 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
104 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
105 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
106 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.24
Nodule 0
Rhizoplane 8.96
Rhizosphere 85.82
Stem 0
Stem Tuber 0
Unclassified 0.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10025029 3300028800 Bacteria 6076
2 Ga0070683_100741375 3300005329 Bacteria 941
3 Ga0070691_10071106 3300005341 Bacteria 1689
4 Ga0070659_100034453 3300005366 Bacteria 3938
5 Ga0070714_100015700 3300005435 Bacteria 6098
6 Ga0070713_100035140 3300005436 Bacteria 4032
7 Ga0070713_100503925 3300005436 Bacteria 1142
8 Ga0070710_10030869 3300005437 Bacteria 2887
9 Ga0070710_10100215 3300005437 Bacteria 1724
10 Ga0070711_100018115 3300005439 Bacteria 4493
11 Ga0070684_100303549 3300005535 Bacteria 1465
12 Ga0070696_100132007 3300005546 Bacteria 1818
13 Ga0068866_10242098 3300005718 Bacteria 1099
14 Ga0068861_100183601 3300005719 Bacteria 1743
15 Ga0081538_10001067 3300005981 Bacteria 29157
16 Ga0070717_10061540 3300006028 Bacteria 3111
17 Ga0070712_100049894 3300006175 Bacteria 2909
18 Ga0068865_100270253 3300006881 Bacteria 1349
19 Ga0105240_10005188 3300009093 Bacteria 19491
20 Ga0111539_10014482 3300009094 Bacteria 9844
21 Ga0157369_10011670 3300013105 Bacteria 9979
22 Ga0213876_10014316 3300021384 Bacteria 4205
23 Ga0213876_10051119 3300021384 Bacteria 2184
24 Ga0207426_1047027 3300025302 Bacteria 1304
25 Ga0207699_10260387 3300025906 Bacteria 1199
26 Ga0207695_10003738 3300025913 Bacteria 21160
27 Ga0207693_10004786 3300025915 Bacteria 11387
28 Ga0207693_10063672 3300025915 Bacteria 2889
29 Ga0207693_10191323 3300025915 Bacteria 1610
30 Ga0207663_10104655 3300025916 Bacteria 1908
31 Ga0207664_10080077 3300025929 Bacteria 2654
32 Ga0207664_10112524 3300025929 Bacteria 2266
33 Ga0207706_10222753 3300025933 Bacteria 1651
34 Ga0207704_10066747 3300025938 Bacteria 2260
35 Ga0207691_10052409 3300025940 Bacteria 3726
36 Ga0207691_10195562 3300025940 Bacteria 1762
37 Ga0207661_10551638 3300025944 Bacteria 1056
38 Ga0207708_10030056 3300026075 Bacteria 4120
39 Ga0207708_10219761 3300026075 Bacteria 1522
40 Ga0207702_10051356 3300026078 Bacteria 3484
41 Ga0207675_100008541 3300026118 Bacteria 9631
42 Ga0207675_100230308 3300026118 Bacteria 1787
43 Ga0265337_1004387 3300028556 Bacteria 5857
44 Ga0265326_10000717 3300028558 Bacteria 12252
45 Ga0265319_1000109 3300028563 Bacteria 63717
46 Ga0265319_1000326 3300028563 Bacteria 35093
47 Ga0265318_10001686 3300028577 Bacteria 12694
48 Ga0265336_10000060 3300028666 Bacteria 103055
49 Ga0265338_10000234 3300028800 Bacteria 103028
50 Ga0265324_10004616 3300029957 Bacteria 6152
51 Ga0265320_10043604 3300031240 Bacteria 2216
52 Ga0265340_10000014 3300031247 Bacteria 103055
53 Ga0265327_10016001 3300031251 Bacteria 4798
54 Ga0265316_10019234 3300031344 Bacteria 5848
55 Ga0265316_10207817 3300031344 Bacteria 1449
56 Ga0307406_10017484 3300031901 Bacteria 4176
57 Ga0307409_100149268 3300031995 Bacteria 2027
58 Ga0307409_100179072 3300031995 Bacteria 1875
59 Ga0307415_100093921 3300032126 Bacteria 2179
60 Ga0395900_0098137 3300037418 Bacteria 3010
61 Ga0395900_0178856 3300037418 Bacteria 2157
62 Ga0395898_0000646 3300037466 Bacteria 63280
63 Ga0436364_0552735 3300037853 Bacteria 3378
64 Ga0436365_1682084 3300039437 Bacteria 2101
65 Ga0451577_0002261 3300042876 Bacteria 23346
66 Ga0451577_0141542 3300042876 Bacteria 2162
67 Ga0451577_0367437 3300042876 Unclassified 1305
68 Ga0466969_0019797 3300044656 Bacteria 3491
69 Ga0466961_0088433 3300044693 Bacteria 1957
70 Ga0466964_0139235 3300044706 Bacteria 1114
71 Ga0466968_0021562 3300044735 Bacteria 2610
72 Ga0466959_0003000 3300045049 Bacteria 10899
73 Ga0466959_0052084 3300045049 Bacteria 2999
74 Ga0451576_0122813 3300045051 Bacteria 2704
75 Ga0466958_0008916 3300045836 Bacteria 5574
76 Ga0466958_0046061 3300045836 Bacteria 2631
77 Ga0466958_0100879 3300045836 Bacteria 1795
78 Ga0466967_0106238 3300045976 Bacteria 2573
79 Ga0466967_0456171 3300045976 Bacteria 1250
80 Ga0495592_0023815 3300046454 Bacteria 4657
81 Ga0495629_0122743 3300046459 Bacteria 1810
82 Ga0495653_0031187 3300046463 Bacteria 4238
83 Ga0495608_0045848 3300046511 Bacteria 2911
84 Ga0495618_0107803 3300046514 Bacteria 1784
85 Ga0495628_0025686 3300046516 Bacteria 4812
86 Ga0495640_0104919 3300046533 Bacteria 1852
87 Ga0495667_0110383 3300046559 Bacteria 1777
88 Ga0495667_0133726 3300046559 Bacteria 1599
89 Ga0495635_0053366 3300046663 Bacteria 2785
90 Ga0495657_0038980 3300046675 Bacteria 3267
91 Ga0495623_0024401 3300046679 Bacteria 3897
92 Ga0495613_0092205 3300046689 Bacteria 2194
93 Ga0495600_0025294 3300046809 Bacteria 3826
94 Ga0495604_0000469 3300047317 Bacteria 35612
95 Ga0495604_0128004 3300047317 Bacteria 1828
96 Ga0495674_0141086 3300047319 Bacteria 2025
97 Ga0495675_0095980 3300047444 Bacteria 1859
98 Ga0495684_0041305 3300047471 Bacteria 3534
99 Ga0495684_0100941 3300047471 Bacteria 2182
100 Ga0496100_0000285 3300048903 Bacteria 25690
101 Ga0496101_0001638 3300048904 Bacteria 13425
102 Ga0496102_0000148 3300048905 Bacteria 95925
103 Ga0496103_0000141 3300048906 Bacteria 75035
104 Ga0496104_0000028 3300048907 Bacteria 203377
105 Ga0496104_0023596 3300048907 Bacteria 5656
106 Ga0496104_0037529 3300048907 Bacteria 4532
107 Ga0496105_0045140 3300048908 Bacteria 3636
108 Ga0496111_0000141 3300048914 Bacteria 32275
109 Ga0496113_0013994 3300048916 Bacteria 5459
110 Ga0496115_0000101 3300048918 Bacteria 80831
111 Ga0496115_0135389 3300048918 Bacteria 2031
112 Ga0501036_0040448 3300049572 Bacteria 3943
113 Ga0501040_0031356 3300049576 Bacteria 3592
114 Ga0501041_0033035 3300049577 Bacteria 3128
115 Ga0501043_0466520 3300049579 Bacteria 947
116 Ga0501048_0069265 3300049582 Bacteria 2492
117 Ga0501069_0160593 3300049585 Bacteria 1294
118 Ga0501071_0017306 3300049587 Bacteria 4969
119 Ga0501071_0094868 3300049587 Bacteria 2195
120 Ga0501072_0017502 3300049588 Bacteria 5508
121 Ga0501074_0075753 3300049590 Bacteria 2415
122 Ga0501075_0081336 3300049591 Bacteria 2452
123 Ga0501076_0049764 3300049592 Bacteria 3315
124 Ga0501079_0139687 3300049741 Bacteria 1887
125 Ga0501079_0185403 3300049741 Bacteria 1624
126 Ga0501081_0077625 3300049743 Bacteria 2321
127 Ga0501035_0272855 3300049822 Bacteria 1431
128 nmdc:mga08y16_752037_c1 3300050511 Bacteria 971
129 Ga0495601_0013316 3300053077 Bacteria 4944
130 Ga0495619_0039159 3300053085 Bacteria 3094
131 Ga0500556_0000334 3300053104 Bacteria 35131
132 Ga0500616_0004084 3300053153 Bacteria 10601
133 Ga0466962_0077688 3300061719 Bacteria 1587
134 Ga0530510_0399159 3300061734 Bacteria 1036
135 Ga0265338_10025029
136 Ga0070683_100741375
137 Ga0070691_10071106
138 Ga0070659_100034453
139 Ga0070714_100015700
140 Ga0070713_100035140
141 Ga0070713_100503925
142 Ga0070710_10030869
143 Ga0070710_10100215
144 Ga0070711_100018115
145 Ga0070684_100303549
146 Ga0070696_100132007
147 Ga0068866_10242098
148 Ga0068861_100183601
149 Ga0081538_10001067
150 Ga0070717_10061540
151 Ga0070712_100049894
152 Ga0068865_100270253
153 Ga0105240_10005188
154 Ga0111539_10014482
155 Ga0157369_10011670
156 Ga0213876_10014316
157 Ga0213876_10051119
158 Ga0207426_1047027
159 Ga0207699_10260387
160 Ga0207695_10003738
161 Ga0207693_10004786
162 Ga0207693_10063672
163 Ga0207693_10191323
164 Ga0207663_10104655
165 Ga0207664_10080077
166 Ga0207664_10112524
167 Ga0207706_10222753
168 Ga0207704_10066747
169 Ga0207691_10052409
170 Ga0207691_10195562
171 Ga0207661_10551638
172 Ga0207708_10030056
173 Ga0207708_10219761
174 Ga0207702_10051356
175 Ga0207675_100008541
176 Ga0207675_100230308
177 Ga0265337_1004387
178 Ga0265326_10000717
179 Ga0265319_1000109
180 Ga0265319_1000326
181 Ga0265318_10001686
182 Ga0265336_10000060
183 Ga0265338_10000234
184 Ga0265324_10004616
185 Ga0265320_10043604
186 Ga0265340_10000014
187 Ga0265327_10016001
188 Ga0265316_10019234
189 Ga0265316_10207817
190 Ga0307406_10017484
191 Ga0307409_100149268
192 Ga0307409_100179072
193 Ga0307415_100093921
194 Ga0395900_0098137
195 Ga0395900_0178856
196 Ga0395898_0000646
197 Ga0436364_0552735
198 Ga0436365_1682084
199 Ga0451577_0002261
200 Ga0451577_0141542
201 Ga0451577_0367437
202 Ga0466969_0019797
203 Ga0466961_0088433
204 Ga0466964_0139235
205 Ga0466968_0021562
206 Ga0466959_0003000
207 Ga0466959_0052084
208 Ga0451576_0122813
209 Ga0466958_0008916
210 Ga0466958_0046061
211 Ga0466958_0100879
212 Ga0466967_0106238
213 Ga0466967_0456171
214 Ga0495592_0023815
215 Ga0495629_0122743
216 Ga0495653_0031187
217 Ga0495608_0045848
218 Ga0495618_0107803
219 Ga0495628_0025686
220 Ga0495640_0104919
221 Ga0495667_0110383
222 Ga0495667_0133726
223 Ga0495635_0053366
224 Ga0495657_0038980
225 Ga0495623_0024401
226 Ga0495613_0092205
227 Ga0495600_0025294
228 Ga0495604_0000469
229 Ga0495604_0128004
230 Ga0495674_0141086
231 Ga0495675_0095980
232 Ga0495684_0041305
233 Ga0495684_0100941
234 Ga0496100_0000285
235 Ga0496101_0001638
236 Ga0496102_0000148
237 Ga0496103_0000141
238 Ga0496104_0000028
239 Ga0496104_0023596
240 Ga0496104_0037529
241 Ga0496105_0045140
242 Ga0496111_0000141
243 Ga0496113_0013994
244 Ga0496115_0000101
245 Ga0496115_0135389
246 Ga0501036_0040448
247 Ga0501040_0031356
248 Ga0501041_0033035
249 Ga0501043_0466520
250 Ga0501048_0069265
251 Ga0501069_0160593
252 Ga0501071_0017306
253 Ga0501071_0094868
254 Ga0501072_0017502
255 Ga0501074_0075753
256 Ga0501075_0081336
257 Ga0501076_0049764
258 Ga0501079_0139687
259 Ga0501079_0185403
260 Ga0501081_0077625
261 Ga0501035_0272855
262 nmdc:mga08y16_752037_c1
263 Ga0495601_0013316
264 Ga0495619_0039159
265 Ga0500556_0000334
266 Ga0500616_0004084
267 Ga0466962_0077688
268 Ga0530510_0399159

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01933

CofD

2-phospho-L-lactate transferase CofD

16

332

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c3e-assembly2.cif.gz_D crystal structure of 2-phospho-(s)-lactate transferase from methanosarcina mazei in complex with fo and gdp. northeast structural genomics consortium target mar46 0.9373 5 291
6uw3-assembly1.cif.gz_B the crystal structure of fbia from mycobacterium smegmatis, gdp bound form 0.9318 3 292
6uvx-assembly1.cif.gz_B the crystal structure of fbia from mycobacterium smegmatis, apo state 0.9181 3 292
6uw3-assembly1.cif.gz_B the crystal structure of fbia from mycobacterium smegmatis, gdp bound form 0.9106 3 292
3c3e-assembly2.cif.gz_D crystal structure of 2-phospho-(s)-lactate transferase from methanosarcina mazei in complex with fo and gdp. northeast structural genomics consortium target mar46 0.9068 5 291
ID Description Score Start End Superfamily
2ffeA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;CofD-like domain 0.9267 37 123 1.10.8.240
2ffeA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;CofD-like domain 0.9168 37 123 1.10.8.240
af_Q2G0Y6_200_393_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8647 2 31 3.40.50.620
3c3eA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;CofD-like domains 0.8481 6 290 3.40.50.10680
3c3eA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;CofD-like domains 0.8252 6 290 3.40.50.10680
ID Description Score Start End GO Terms
AF-A0A7W0LTQ7-F1-model_v4 YvcK family protein 0.9847 3 110 GO:0000287
GO:0043743
AF-A0A2W5Y5U2-F1-model_v4 2-phospho-L-lactate transferase 0.9793 6 296 GO:0000287
GO:0043743
AF-A0A640Y4H6-F1-model_v4 2-phospho-L-lactate transferase 0.9756 3 141 GO:0000287
GO:0043743
AF-A0A7Y1XAL6-F1-model_v4 2-phospho-L-lactate transferase 0.9727 2 152 GO:0000287
GO:0043743
AF-A0A3D3T4I0-F1-model_v4 2-phospho-L-lactate transferase 0.9684 2 153 GO:0000287
GO:0043743

Map