F159744

General Info

Members Datasets Scaffolds Average Seq Length
134 115 268 297

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10045324|Ga0105249_100453244
Length 327
Sequence LNSKTRFSQKLEEIKSQGLSKPSESLRDYSMSNLSDARAPLSVLIPVKNEAANVRDCISRVSFAEEIVVVDSASTDGTRAIAEGAGARVVQFVWNGTLPRKKNWALENIPWQNEWVLIVDADERITPELEREIRQAIRCTDVDGFYLNRRFWFLGGWINHCGYFPSWNLRLFRHRLGRYEQIEINNSAQSGDNEVHEHVLLDGRSNYLSTPMEHYAFPDIATFIEKHNRYSTWEAEAREELYQSTTGKTLRATAFGTVTERKRLLKKLSRSLPCRPALRFLFHYIWKQGFRDGYRGWVLCRLLAWYEWLIGLKEREIKAHARGKTQR

Samples

Sample ID Description Type Environment
1 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
47 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
48 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
76 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
77 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
87 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
88 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
89 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
92 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
97 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
112 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
113 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
114 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
115 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.76
Metatranscriptomes 0
Isolates 2.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.49
Nodule 0
Rhizoplane 6.72
Rhizosphere 90.3
Stem 0
Stem Tuber 0
Unclassified 6.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105249_10045324 3300009553 Bacteria 3999
2 SwRhRL2b_contig_997312 2162886007 Unclassified 2149
3 JGI24033J26618_1000118 3300002155 Bacteria 10645
4 JGI25406J46586_10022565 3300003203 Bacteria 2504
5 Ga0065703_1018919 3300005272 Bacteria 5162
6 Ga0065707_10012433 3300005295 Bacteria 2743
7 Ga0070689_100198316 3300005340 Bacteria 1638
8 Ga0070668_100171370 3300005347 Bacteria 1767
9 Ga0070669_100006267 3300005353 Bacteria 8583
10 Ga0070669_100545634 3300005353 Bacteria 966
11 Ga0070714_100121018 3300005435 Unclassified 2328
12 Ga0070711_100047595 3300005439 Bacteria 2929
13 Ga0070708_100208942 3300005445 Bacteria 1829
14 Ga0070678_100006072 3300005456 Bacteria 7047
15 Ga0070681_10090881 3300005458 Bacteria 3003
16 Ga0070707_100000380 3300005468 Bacteria 43944
17 Ga0070707_100493535 3300005468 Unclassified 1186
18 Ga0070707_100544403 3300005468 Bacteria 1123
19 Ga0070698_100011348 3300005471 Bacteria 9460
20 Ga0070699_100284149 3300005518 Bacteria 1482
21 Ga0070679_100072982 3300005530 Bacteria 3424
22 Ga0070697_100007363 3300005536 Bacteria 8564
23 Ga0070665_100156061 3300005548 Bacteria 2284
24 Ga0070704_100167117 3300005549 Bacteria 1745
25 Ga0068859_100023254 3300005617 Bacteria 6219
26 Ga0068862_100070228 3300005844 Bacteria 3023
27 Ga0081455_10027619 3300005937 Bacteria 5199
28 Ga0081455_10136224 3300005937 Bacteria 1913
29 Ga0081538_10010020 3300005981 Bacteria 7816
30 Ga0081540_1059997 3300005983 Bacteria 1822
31 Ga0081539_10009306 3300005985 Bacteria 8248
32 Ga0081539_10045211 3300005985 Bacteria 2534
33 Ga0070712_100017919 3300006175 Bacteria 4589
34 Ga0075428_100116584 3300006844 Bacteria 2909
35 Ga0075428_100307898 3300006844 Bacteria 1703
36 Ga0075433_10011634 3300006852 Bacteria 7087
37 Ga0097620_100023253 3300006931 Bacteria 6219
38 Ga0075435_100000673 3300007076 Bacteria 21152
39 Ga0105240_10320560 3300009093 Bacteria 1767
40 Ga0111539_10095701 3300009094 Bacteria 3488
41 Ga0114129_10250210 3300009147 Bacteria 2379
42 Ga0105241_10107911 3300009174 Bacteria 2225
43 Ga0105242_10173741 3300009176 Bacteria 1895
44 Ga0099796_10028598 3300010159 Bacteria 1791
45 Ga0099796_10132329 3300010159 Unclassified 968
46 Ga0105246_10144616 3300011119 Bacteria 1792
47 Ga0105246_10170747 3300011119 Bacteria 1665
48 Ga0157374_10279457 3300013296 Bacteria 1648
49 Ga0157378_10362276 3300013297 Unclassified 1419
50 Ga0157380_10013992 3300014326 Bacteria 5860
51 Ga0182008_10085673 3300014497 Bacteria 1552
52 Ga0157377_10059568 3300014745 Bacteria 2177
53 Ga0157376_10066965 3300014969 Bacteria 3037
54 Ga0213873_10003174 3300021358 Bacteria 2939
55 Ga0213872_10068968 3300021361 Bacteria 1595
56 Ga0213871_10005496 3300021441 Bacteria 2617
57 Ga0209050_1000631 3300025298 Bacteria 54759
58 Ga0207697_10039339 3300025315 Bacteria 1940
59 Ga0207680_10137266 3300025903 Bacteria 1618
60 Ga0207684_10227898 3300025910 Bacteria 1608
61 Ga0207684_10300974 3300025910 Bacteria 1383
62 Ga0207693_10043430 3300025915 Bacteria 3536
63 Ga0207662_10131496 3300025918 Bacteria 1578
64 Ga0207657_10120046 3300025919 Bacteria 2163
65 Ga0207652_10022056 3300025921 Bacteria 5263
66 Ga0207646_10000270 3300025922 Bacteria 70706
67 Ga0207646_10267891 3300025922 Bacteria 1544
68 Ga0207681_10200129 3300025923 Bacteria 1533
69 Ga0207706_10112731 3300025933 Bacteria 2392
70 Ga0207670_10367075 3300025936 Bacteria 1143
71 Ga0207669_10122661 3300025937 Bacteria 1768
72 Ga0207665_10198562 3300025939 Bacteria 1461
73 Ga0207712_10304722 3300025961 Bacteria 1309
74 Ga0207678_10092320 3300026067 Bacteria 2588
75 Ga0207702_10019091 3300026078 Bacteria 5673
76 Ga0207674_10071435 3300026116 Bacteria 3487
77 Ga0207683_10013123 3300026121 Bacteria 7067
78 Ga0207683_10171162 3300026121 Bacteria 1967
79 Ga0268266_10096231 3300028379 Bacteria 2601
80 Ga0268266_10489953 3300028379 Bacteria 1173
81 Ga0265318_10064142 3300028577 Bacteria 1367
82 Ga0265327_10000016 3300031251 Bacteria 467439
83 Ga0265327_10057909 3300031251 Bacteria 1991
84 Ga0265316_10328579 3300031344 Bacteria 1110
85 Ga0265313_10024701 3300031595 Unclassified 3204
86 Ga0373923_0046862 3300035111 Bacteria 1800
87 Ga0373936_0071390 3300035113 Bacteria 1432
88 Ga0373945_0026339 3300035116 Bacteria 2025
89 Ga0373953_0026010 3300035117 Bacteria 2240
90 Ga0373935_0019349 3300035692 Bacteria 4152
91 Ga0373947_0023307 3300035725 Bacteria 3600
92 Ga0373947_0119102 3300035725 Bacteria 1676
93 Ga0373937_0254189 3300036401 Bacteria 1656
94 Ga0373925_0108051 3300037068 Bacteria 2146
95 Ga0436365_0575139 3300039437 Unclassified 4914
96 Ga0436361_0582708 3300039447 Bacteria 1482
97 Ga0436362_0688750 3300039453 Bacteria 6700
98 Ga0453684_0004779 3300044712 Bacteria 27934
99 Ga0495592_0033477 3300046454 Bacteria 3875
100 Ga0495653_0086575 3300046463 Bacteria 2303
101 Ga0495580_0304219 3300046472 Bacteria 1085
102 Ga0495662_0064313 3300046476 Bacteria 1773
103 Ga0495618_0113265 3300046514 Bacteria 1737
104 Ga0495628_0023164 3300046516 Bacteria 5099
105 Ga0495643_0000894 3300046522 Bacteria 31755
106 Ga0495587_0029636 3300046536 Bacteria 3322
107 Ga0495645_0125012 3300046543 Bacteria 1807
108 Ga0495634_0035157 3300046642 Bacteria 3434
109 Ga0495657_0187221 3300046675 Bacteria 1267
110 Ga0495599_0011078 3300046678 Bacteria 5532
111 Ga0495623_0002957 3300046679 Bacteria 11180
112 Ga0495646_0052427 3300046680 Bacteria 2464
113 Ga0495604_0041462 3300047317 Bacteria 3610
114 Ga0495674_0235062 3300047319 Bacteria 1512
115 Ga0495675_0075229 3300047444 Bacteria 2128
116 Ga0495684_0021395 3300047471 Bacteria 4979
117 Ga0496104_0414640 3300048907 Bacteria 1259
118 Ga0496109_0132538 3300048912 Unclassified 2327
119 Ga0496109_0278965 3300048912 Bacteria 1575
120 Ga0496112_0224280 3300048915 Unclassified 1835
121 Ga0496112_0225171 3300048915 Bacteria 1831
122 Ga0496112_0347637 3300048915 Bacteria 1426
123 Ga0496114_0010647 3300048917 Bacteria 7319
124 Ga0496115_0041951 3300048918 Bacteria 3644
125 Ga0496115_0137622 3300048918 Bacteria 2014
126 Ga0501035_0109714 3300049822 Bacteria 2419
127 nmdc:mga05p37_212295_c1 3300050507 Bacteria 2339
128 nmdc:mga05p37_222703_c1 3300050507 Bacteria 2276
129 nmdc:mga0a205_6363_c1 3300050515 Bacteria 9515
130 Ga0495612_0020639 3300053078 Bacteria 2641
131 Ga0500643_012911 3300053087 Bacteria 2975
132 2688065595 2687453257 Bacteria 6784659
133 2889420226 2889415604 Bacteria 8048700
134 2920109589 2920107658 Bacteria 10042636
135 Ga0105249_10045324
136 SwRhRL2b_contig_997312
137 JGI24033J26618_1000118
138 JGI25406J46586_10022565
139 Ga0065703_1018919
140 Ga0065707_10012433
141 Ga0070689_100198316
142 Ga0070668_100171370
143 Ga0070669_100006267
144 Ga0070669_100545634
145 Ga0070714_100121018
146 Ga0070711_100047595
147 Ga0070708_100208942
148 Ga0070678_100006072
149 Ga0070681_10090881
150 Ga0070707_100000380
151 Ga0070707_100493535
152 Ga0070707_100544403
153 Ga0070698_100011348
154 Ga0070699_100284149
155 Ga0070679_100072982
156 Ga0070697_100007363
157 Ga0070665_100156061
158 Ga0070704_100167117
159 Ga0068859_100023254
160 Ga0068862_100070228
161 Ga0081455_10027619
162 Ga0081455_10136224
163 Ga0081538_10010020
164 Ga0081540_1059997
165 Ga0081539_10009306
166 Ga0081539_10045211
167 Ga0070712_100017919
168 Ga0075428_100116584
169 Ga0075428_100307898
170 Ga0075433_10011634
171 Ga0097620_100023253
172 Ga0075435_100000673
173 Ga0105240_10320560
174 Ga0111539_10095701
175 Ga0114129_10250210
176 Ga0105241_10107911
177 Ga0105242_10173741
178 Ga0099796_10028598
179 Ga0099796_10132329
180 Ga0105246_10144616
181 Ga0105246_10170747
182 Ga0157374_10279457
183 Ga0157378_10362276
184 Ga0157380_10013992
185 Ga0182008_10085673
186 Ga0157377_10059568
187 Ga0157376_10066965
188 Ga0213873_10003174
189 Ga0213872_10068968
190 Ga0213871_10005496
191 Ga0209050_1000631
192 Ga0207697_10039339
193 Ga0207680_10137266
194 Ga0207684_10227898
195 Ga0207684_10300974
196 Ga0207693_10043430
197 Ga0207662_10131496
198 Ga0207657_10120046
199 Ga0207652_10022056
200 Ga0207646_10000270
201 Ga0207646_10267891
202 Ga0207681_10200129
203 Ga0207706_10112731
204 Ga0207670_10367075
205 Ga0207669_10122661
206 Ga0207665_10198562
207 Ga0207712_10304722
208 Ga0207678_10092320
209 Ga0207702_10019091
210 Ga0207674_10071435
211 Ga0207683_10013123
212 Ga0207683_10171162
213 Ga0268266_10096231
214 Ga0268266_10489953
215 Ga0265318_10064142
216 Ga0265327_10000016
217 Ga0265327_10057909
218 Ga0265316_10328579
219 Ga0265313_10024701
220 Ga0373923_0046862
221 Ga0373936_0071390
222 Ga0373945_0026339
223 Ga0373953_0026010
224 Ga0373935_0019349
225 Ga0373947_0023307
226 Ga0373947_0119102
227 Ga0373937_0254189
228 Ga0373925_0108051
229 Ga0436365_0575139
230 Ga0436361_0582708
231 Ga0436362_0688750
232 Ga0453684_0004779
233 Ga0495592_0033477
234 Ga0495653_0086575
235 Ga0495580_0304219
236 Ga0495662_0064313
237 Ga0495618_0113265
238 Ga0495628_0023164
239 Ga0495643_0000894
240 Ga0495587_0029636
241 Ga0495645_0125012
242 Ga0495634_0035157
243 Ga0495657_0187221
244 Ga0495599_0011078
245 Ga0495623_0002957
246 Ga0495646_0052427
247 Ga0495604_0041462
248 Ga0495674_0235062
249 Ga0495675_0075229
250 Ga0495684_0021395
251 Ga0496104_0414640
252 Ga0496109_0132538
253 Ga0496109_0278965
254 Ga0496112_0224280
255 Ga0496112_0225171
256 Ga0496112_0347637
257 Ga0496114_0010647
258 Ga0496115_0041951
259 Ga0496115_0137622
260 Ga0501035_0109714
261 nmdc:mga05p37_212295_c1
262 nmdc:mga05p37_222703_c1
263 nmdc:mga0a205_6363_c1
264 Ga0495612_0020639
265 Ga0500643_012911
266 2688065595
267 2889420226
268 2920109589

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

42

191

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7p5l-assembly1.cif.gz_B crystal structure of mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at ph 7.1 - apo form 0.7621 9 121
2ffv-assembly2.cif.gz_B human ppgalnact-2 complexed with manganese and udp 0.7374 6 121
4d11-assembly4.cif.gz_F galnac-t2 crystal soaked with udp-5sgalnac, mea2 peptide and manganese (lower resolution dataset) 0.7341 4 121
7qoq-assembly1.cif.gz_B crystal structure of mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at ph 8.5 in complex with ump and magnesium 0.7269 9 121
7qcp-assembly1.cif.gz_A crystal structure of mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at ph 7.2 - apo form 0.7265 9 121
ID Description Score Start End Superfamily
af_P9WLV9_5_255_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8119 9 122 3.90.550.10
af_Q54I60_1_206_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.7854 11 63 3.40.50.170
af_O05154_2_177_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.763 11 145 3.90.550.10
af_P9WMX1_74_289_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7451 7 123 3.90.550.10
af_Q2FV58_23_231_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7355 1 118 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A2V5R7E0-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.9739 16 297
AF-E8R2I6-F1-model_v4 Glycosyl transferase group 1 0.9602 1 294 GO:0016740
AF-A0A2V6GA71-F1-model_v4 Glycosyltransferase 0.9529 1 243 GO:0016740
AF-A0A2V9VMZ0-F1-model_v4 Glycosyltransferase 0.9529 2 290 GO:0016740
AF-A0A6P0QYR6-F1-model_v4 deleted 0.9514 3 83

Map