F159201

General Info

Members Datasets Scaffolds Average Seq Length
134 103 268 342

Family's Representative Sequence

Representative Sequence 3300005545|Ga0070695_100022878|Ga0070695_1000228781
Length 386
Sequence MPDSRRSPRAVAPGRVSTAPARRREASRGLTYRDAGVNIDAKMKAIDRIRGVARGTHRRGVLGEIGSFGGLFDLLDAGTWKRPVLVSSTDGVGTKIKIAMRIGDHTTVGQDLVNHCVNDILVQGATPLFFLDYIAMGKVIPQVLVDLASGMAKGCREAGCALLGGETAEMPSLYKPGEYDLAGFIVGVVDRVHLIDGARISPGDVLLGLASSGLHTNGYSLARKVFFERRGLKPQAVLPELGLSVGEVLLAVHRSYLPLLRDLIPTGALYGLAHITGGGFTDNIPRILPKGTAARLDLGSWPIPPVFRLLQRDGRIADDEMLRTFNMGIGMVLVVPAHREAEVTLHLDRMREPHWRIGEIVPGNRKVIYTRPATAGEGGWTSTPHS

Samples

Sample ID Description Type Environment
1 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
59 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
60 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
65 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
68 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
69 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
76 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
77 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
78 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
79 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
80 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
81 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
82 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
87 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
88 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
103 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0.75
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.49
Nodule 0
Rhizoplane 2.24
Rhizosphere 94.78
Stem 0
Stem Tuber 0
Unclassified 0.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070695_100022878 3300005545 Bacteria 3836
2 Ga0065704_10001770 3300005289 Bacteria 11948
3 Ga0070683_100016865 3300005329 Bacteria 6444
4 Ga0070683_100054184 3300005329 Bacteria 3719
5 Ga0070680_100010231 3300005336 Bacteria 7232
6 Ga0070682_100053080 3300005337 Bacteria 2539
7 Ga0070682_100075541 3300005337 Bacteria 2167
8 Ga0068868_100397120 3300005338 Bacteria 1189
9 Ga0070689_100031423 3300005340 Bacteria 4035
10 Ga0070661_100000718 3300005344 Bacteria 24252
11 Ga0070709_10000278 3300005434 Bacteria 32498
12 Ga0070714_100000044 3300005435 Bacteria 115191
13 Ga0070714_100004930 3300005435 Bacteria 10145
14 Ga0070714_100139319 3300005435 Bacteria 2176
15 Ga0070713_100014770 3300005436 Bacteria 5811
16 Ga0070711_100041567 3300005439 Bacteria 3106
17 Ga0070708_100017257 3300005445 Bacteria 6014
18 Ga0070708_100049223 3300005445 Bacteria 3728
19 Ga0070708_100097573 3300005445 Bacteria 2687
20 Ga0070681_10008279 3300005458 Bacteria 10181
21 Ga0070681_10123712 3300005458 Bacteria 2519
22 Ga0070707_100006864 3300005468 Bacteria 10548
23 Ga0070699_100023795 3300005518 Bacteria 5278
24 Ga0070679_100003412 3300005530 Bacteria 14549
25 Ga0070679_100020106 3300005530 Bacteria 6506
26 Ga0070679_100027171 3300005530 Bacteria 5629
27 Ga0070684_100004002 3300005535 Bacteria 11153
28 Ga0070684_100184831 3300005535 Bacteria 1895
29 Ga0070697_100000375 3300005536 Bacteria 34936
30 Ga0068853_100175448 3300005539 Bacteria 1941
31 Ga0068853_100187422 3300005539 Bacteria 1878
32 Ga0070696_100000107 3300005546 Bacteria 42492
33 Ga0070693_100170413 3300005547 Bacteria 1394
34 Ga0070704_100068389 3300005549 Bacteria 2569
35 Ga0068855_100002271 3300005563 Bacteria 23735
36 Ga0068854_100005337 3300005578 Bacteria 8111
37 Ga0068859_100080279 3300005617 Bacteria 3303
38 Ga0068859_100151233 3300005617 Bacteria 2397
39 Ga0068862_100371752 3300005844 Bacteria 1331
40 Ga0075428_100238808 3300006844 Bacteria 1961
41 Ga0075431_100005781 3300006847 Bacteria 12234
42 Ga0075434_100125448 3300006871 Bacteria 2584
43 Ga0097620_100080280 3300006931 Bacteria 3303
44 Ga0097620_100151234 3300006931 Bacteria 2397
45 Ga0075435_100151774 3300007076 Bacteria 1948
46 Ga0105240_10066354 3300009093 Bacteria 4477
47 Ga0111539_10008977 3300009094 Bacteria 12657
48 Ga0157373_10008546 3300013100 Bacteria 7605
49 Ga0157370_10011529 3300013104 Bacteria 9233
50 Ga0157369_10011091 3300013105 Bacteria 10253
51 Ga0157369_10088922 3300013105 Bacteria 3298
52 Ga0157372_10002786 3300013307 Bacteria 18883
53 Ga0157372_10031094 3300013307 Bacteria 5845
54 Ga0206356_11207434 3300020070 Bacteria 1446
55 Ga0207699_10000059 3300025906 Bacteria 94698
56 Ga0207707_10002653 3300025912 Bacteria 15992
57 Ga0207707_10003728 3300025912 Bacteria 13494
58 Ga0207707_10005904 3300025912 Bacteria 10709
59 Ga0207707_10052844 3300025912 Bacteria 3536
60 Ga0207695_10002624 3300025913 Bacteria 26302
61 Ga0207695_10040588 3300025913 Bacteria 4987
62 Ga0207693_10023852 3300025915 Bacteria 4856
63 Ga0207660_10001459 3300025917 Bacteria 15885
64 Ga0207652_10000184 3300025921 Bacteria 66070
65 Ga0207652_10039130 3300025921 Bacteria 4024
66 Ga0207652_10117812 3300025921 Bacteria 2360
67 Ga0207646_10006637 3300025922 Bacteria 11931
68 Ga0207646_10097196 3300025922 Bacteria 2638
69 Ga0207664_10000044 3300025929 Bacteria 147216
70 Ga0207664_10012824 3300025929 Bacteria 6002
71 Ga0207664_10173181 3300025929 Bacteria 1848
72 Ga0207665_10050460 3300025939 Bacteria 2798
73 Ga0207711_10104613 3300025941 Bacteria 2509
74 Ga0207661_10032947 3300025944 Bacteria 4019
75 Ga0207667_10089684 3300025949 Bacteria 3177
76 Ga0207640_10023082 3300025981 Bacteria 3735
77 Ga0207639_10429783 3300026041 Bacteria 1195
78 Ga0207708_10051076 3300026075 Bacteria 3147
79 Ga0209983_1001389 3300027665 Bacteria 5392
80 Ga0265354_1002612 3300028016 Bacteria 2195
81 Ga0265316_10122336 3300031344 Bacteria 1965
82 Ga0265316_10176601 3300031344 Bacteria 1591
83 Ga0316577_10000037 3300031733 Bacteria 29274
84 Ga0316577_10002895 3300031733 Bacteria 8580
85 Ga0316580_10046915 3300032139 Bacteria 1332
86 Ga0373946_0016624 3300035171 Bacteria 2805
87 Ga0316574_0060236 3300035398 Bacteria 2382
88 Ga0373927_0052148 3300035695 Bacteria 2646
89 Ga0373947_0072641 3300035725 Bacteria 2113
90 Ga0316582_0139451 3300036647 Bacteria 1634
91 Ga0316584_0008967 3300036712 Bacteria 6917
92 Ga0373925_0000342 3300037068 Bacteria 48487
93 Ga0373925_0024199 3300037068 Bacteria 4433
94 Ga0316581_0030690 3300037588 Bacteria 1618
95 Ga0242420_020245 3300038996 Bacteria 1183
96 Ga0400487_61890 3300039110 Bacteria 2089
97 Ga0436361_0610177 3300039447 Bacteria 2264
98 Ga0453683_0009990 3300044673 Bacteria 6314
99 Ga0453684_0138920 3300044712 Bacteria 2905
100 Ga0453684_0337481 3300044712 Bacteria 1702
101 Ga0453684_0524831 3300044712 Bacteria 1308
102 Ga0453684_0702681 3300044712 Unclassified 1098
103 Ga0466967_0001421 3300045976 Bacteria 13862
104 Ga0466967_0173797 3300045976 Bacteria 2028
105 Ga0495629_0000010 3300046459 Bacteria 340114
106 Ga0495580_0003510 3300046472 Bacteria 13326
107 Ga0495639_0000018 3300046475 Bacteria 74700
108 Ga0495594_0092530 3300046499 Bacteria 1695
109 Ga0495666_0000033 3300046526 Bacteria 53208
110 Ga0495652_0100134 3300046529 Bacteria 2352
111 Ga0495665_0042081 3300046531 Bacteria 2432
112 Ga0495586_0000023 3300046535 Bacteria 106547
113 Ga0495622_0027946 3300046557 Bacteria 2632
114 Ga0495635_0001791 3300046663 Bacteria 14509
115 Ga0495658_0009171 3300046683 Bacteria 4919
116 Ga0495581_0006724 3300047315 Bacteria 6668
117 Ga0495676_0071841 3300047321 Bacteria 2659
118 Ga0495680_0006320 3300047322 Bacteria 11026
119 Ga0495684_0014712 3300047471 Bacteria 6023
120 Ga0496104_0156712 3300048907 Bacteria 2185
121 Ga0496112_0071654 3300048915 Bacteria 3425
122 Ga0496115_0000925 3300048918 Bacteria 21282
123 Ga0496126_0109029 3300048929 Bacteria 2413
124 Ga0501042_0118911 3300049578 Bacteria 1902
125 Ga0501071_0044001 3300049587 Bacteria 3202
126 Ga0501072_0023329 3300049588 Bacteria 4805
127 Ga0501076_0007142 3300049592 Bacteria 8119
128 Ga0501045_0026934 3300049824 Bacteria 4138
129 nmdc:mga0yw44_115133_c1 3300050492 Bacteria 1727
130 nmdc:mga0qj67_58460_c1 3300050509 Bacteria 3057
131 nmdc:mga08y16_165932_c1 3300050511 Bacteria 2294
132 nmdc:mga0n895_155708_c1 3300050512 Bacteria 2315
133 nmdc:mga0a205_166488_c1 3300050515 Bacteria 2100
134 Ga0500566_0006919 3300053094 Bacteria 6716
135 Ga0070695_100022878
136 Ga0065704_10001770
137 Ga0070683_100016865
138 Ga0070683_100054184
139 Ga0070680_100010231
140 Ga0070682_100053080
141 Ga0070682_100075541
142 Ga0068868_100397120
143 Ga0070689_100031423
144 Ga0070661_100000718
145 Ga0070709_10000278
146 Ga0070714_100000044
147 Ga0070714_100004930
148 Ga0070714_100139319
149 Ga0070713_100014770
150 Ga0070711_100041567
151 Ga0070708_100017257
152 Ga0070708_100049223
153 Ga0070708_100097573
154 Ga0070681_10008279
155 Ga0070681_10123712
156 Ga0070707_100006864
157 Ga0070699_100023795
158 Ga0070679_100003412
159 Ga0070679_100020106
160 Ga0070679_100027171
161 Ga0070684_100004002
162 Ga0070684_100184831
163 Ga0070697_100000375
164 Ga0068853_100175448
165 Ga0068853_100187422
166 Ga0070696_100000107
167 Ga0070693_100170413
168 Ga0070704_100068389
169 Ga0068855_100002271
170 Ga0068854_100005337
171 Ga0068859_100080279
172 Ga0068859_100151233
173 Ga0068862_100371752
174 Ga0075428_100238808
175 Ga0075431_100005781
176 Ga0075434_100125448
177 Ga0097620_100080280
178 Ga0097620_100151234
179 Ga0075435_100151774
180 Ga0105240_10066354
181 Ga0111539_10008977
182 Ga0157373_10008546
183 Ga0157370_10011529
184 Ga0157369_10011091
185 Ga0157369_10088922
186 Ga0157372_10002786
187 Ga0157372_10031094
188 Ga0206356_11207434
189 Ga0207699_10000059
190 Ga0207707_10002653
191 Ga0207707_10003728
192 Ga0207707_10005904
193 Ga0207707_10052844
194 Ga0207695_10002624
195 Ga0207695_10040588
196 Ga0207693_10023852
197 Ga0207660_10001459
198 Ga0207652_10000184
199 Ga0207652_10039130
200 Ga0207652_10117812
201 Ga0207646_10006637
202 Ga0207646_10097196
203 Ga0207664_10000044
204 Ga0207664_10012824
205 Ga0207664_10173181
206 Ga0207665_10050460
207 Ga0207711_10104613
208 Ga0207661_10032947
209 Ga0207667_10089684
210 Ga0207640_10023082
211 Ga0207639_10429783
212 Ga0207708_10051076
213 Ga0209983_1001389
214 Ga0265354_1002612
215 Ga0265316_10122336
216 Ga0265316_10176601
217 Ga0316577_10000037
218 Ga0316577_10002895
219 Ga0316580_10046915
220 Ga0373946_0016624
221 Ga0316574_0060236
222 Ga0373927_0052148
223 Ga0373947_0072641
224 Ga0316582_0139451
225 Ga0316584_0008967
226 Ga0373925_0000342
227 Ga0373925_0024199
228 Ga0316581_0030690
229 Ga0242420_020245
230 Ga0400487_61890
231 Ga0436361_0610177
232 Ga0453683_0009990
233 Ga0453684_0138920
234 Ga0453684_0337481
235 Ga0453684_0524831
236 Ga0453684_0702681
237 Ga0466967_0001421
238 Ga0466967_0173797
239 Ga0495629_0000010
240 Ga0495580_0003510
241 Ga0495639_0000018
242 Ga0495594_0092530
243 Ga0495666_0000033
244 Ga0495652_0100134
245 Ga0495665_0042081
246 Ga0495586_0000023
247 Ga0495622_0027946
248 Ga0495635_0001791
249 Ga0495658_0009171
250 Ga0495581_0006724
251 Ga0495676_0071841
252 Ga0495680_0006320
253 Ga0495684_0014712
254 Ga0496104_0156712
255 Ga0496112_0071654
256 Ga0496115_0000925
257 Ga0496126_0109029
258 Ga0501042_0118911
259 Ga0501071_0044001
260 Ga0501072_0023329
261 Ga0501076_0007142
262 Ga0501045_0026934
263 nmdc:mga0yw44_115133_c1
264 nmdc:mga0qj67_58460_c1
265 nmdc:mga08y16_165932_c1
266 nmdc:mga0n895_155708_c1
267 nmdc:mga0a205_166488_c1
268 Ga0500566_0006919

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00586

AIRS

AIR synthase related protein, N-terminal domain

75

189

0.96

PF02769

AIRS_C

AIR synthase related protein, C-terminal domain

201

371

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vk4-assembly1.cif.gz_B crystal structure of a phosphoribosylformylglycinamidine cyclo-ligase from neisseria gonorrhoeae bound to amppnp and magnesium 0.956 15 329
2v9y-assembly1.cif.gz_A human aminoimidazole ribonucleotide synthetase 0.9515 44 329
1cli-assembly2.cif.gz_C x-ray crystal structure of aminoimidazole ribonucleotide synthetase (purm), from the e. coli purine biosynthetic pathway, at 2.5 a resolution 0.9477 11 328
3qty-assembly1.cif.gz_B crystal structure of phosphoribosylaminoimidazole synthetase from francisella tularensis complexed with pyrophosphate 0.9412 19 329
5vk4-assembly1.cif.gz_A crystal structure of a phosphoribosylformylglycinamidine cyclo-ligase from neisseria gonorrhoeae bound to amppnp and magnesium 0.9387 15 329
ID Description Score Start End Superfamily
5avmH01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.9677 56 169 3.30.1330.10
2z01A01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.964 19 169 3.30.1330.10
5avmH01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.9595 56 169 3.30.1330.10
af_G3V918_434_598_3.30.1330.10 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.9539 3 165 3.30.1330.10
2z01A01 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain 0.9505 19 169 3.30.1330.10
ID Description Score Start End GO Terms
AF-A0A7K0YQN3-F1-model_v4 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (AIRS) (Phosphoribosyl-aminoimidazole synthetase) 0.9834 4 329 GO:0004637
GO:0004641
GO:0005524
GO:0005829
GO:0006189
GO:0046084
GO:0046872
AF-A0A531M166-F1-model_v4 Phosphoribosylformylglycinamidine cyclo-ligase (AIRS) 0.9831 58 197 GO:0004637
GO:0004641
GO:0005829
GO:0006189
GO:0046084
AF-A0A3C1YP99-F1-model_v4 Phosphoribosylformylglycinamidine cyclo-ligase (AIRS) 0.9828 6 198 GO:0004637
GO:0004641
GO:0005829
GO:0006189
GO:0046084
AF-A0A533RRQ1-F1-model_v4 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) (AIR synthase) (Phosphoribosyl-aminoimidazole synthetase) 0.9815 231 329 GO:0004637
GO:0004641
GO:0005524
GO:0005829
GO:0006189
GO:0046084
AF-A0A1G3CZW9-F1-model_v4 Phosphoribosylformylglycinamidine cyclo-ligase (AIRS) 0.9802 60 198 GO:0004637
GO:0004641
GO:0005829
GO:0006189
GO:0046084

Map