F157215

General Info

Members Datasets Scaffolds Average Seq Length
133 106 266 449

Family's Representative Sequence

Representative Sequence 3300042007|Ga0439449_0016910|Ga0439449_0016910_232_1707
Length 483
Sequence MSVADSTAPAVDRKREQRGWIWYDWANSVFPTSVITVFLSRYLTAVASEAARADIARNGPDACADGALERCDIALFGLYFPAGSLFGYLVAFATIVQVVVLPVMGAIADRTQNKRRMLAVLAFTGAVATAALAAVGGDDWHLGVVLFVLANICYGASIVVYYAFLPEIASPDERDAVSSRGWAFGYLGGGLALVVQLGLFLGHDAVGVSESAAVRIGFVISGLWWAGFTLIPLARLKRHQPPHGTESGASVITAGFAELRQTARQARMFPLTLAFLGTYLIFADGIATVANVSAQYGREELRLDETVLITTILIVQFVAFFGGMLHGWVARRWGAKRTIMASLCVWIVVVAAAYFVQAGQQVQFYGLAVGIGLVLGGTNALSRSLFSQMIPPGREAQYFSLYEVGERASSPLGMAMFAAVGQATGSFRLAIISLVAFFVIGLVLMIFVPVRKAIAASGNPMPANARPPGRSRRRHRLPRRPGP

Samples

Sample ID Description Type Environment
1 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
2 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
3 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
4 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
5 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
6 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
7 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
8 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
9 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
10 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
11 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
13 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
14 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
15 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
16 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
17 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
18 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
19 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
20 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
21 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
22 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
23 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
24 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
25 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
26 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
27 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
28 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
29 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
30 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
31 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
32 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
35 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
36 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
37 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
38 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
39 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
40 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
41 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
42 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
43 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
44 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
45 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
46 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
47 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
48 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
50 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
52 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
54 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
55 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
61 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
62 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
63 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
65 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
66 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
67 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
68 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
69 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
70 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
71 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
72 2582580736 Prauserella sp. Am3 Isolate Unclassified
73 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
74 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
75 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
76 2643221647 Streptomyces sp. Root369 Isolate Unclassified
77 2643221670 Streptomyces sp. Root431 Isolate Unclassified
78 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
79 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
80 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
81 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
82 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
83 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
84 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
85 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
86 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
87 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
88 2867428634 Streptomyces sp. RP5T Isolate Unclassified
89 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
90 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
91 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
92 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
93 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
94 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
95 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
96 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
97 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
98 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
99 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
100 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
101 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
102 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
103 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
104 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
105 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
106 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.43
Metatranscriptomes 0.75
Isolates 27.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.01
Nodule 0.75
Rhizoplane 0
Rhizosphere 79.7
Stem 0
Stem Tuber 0
Unclassified 3.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439449_0016910 3300042007 Bacteria 2738
2 Ga0070710_10000902 3300005437 Bacteria 14224
3 Ga0075367_10088691 3300006178 Bacteria 1880
4 Ga0075428_100005384 3300006844 Bacteria 14225
5 Ga0075428_100196153 3300006844 Bacteria 2183
6 Ga0075430_100044839 3300006846 Bacteria 3738
7 Ga0075431_100029664 3300006847 Bacteria 5632
8 Ga0075431_100193672 3300006847 Unclassified 2082
9 Ga0075429_100012450 3300006880 Bacteria 7380
10 Ga0099826_10053684 3300006948 Bacteria 2680
11 Ga0206353_10849700 3300020082 Bacteria 3636
12 Ga0207426_1000643 3300025302 Bacteria 43590
13 Ga0207426_1003231 3300025302 Bacteria 9142
14 Ga0207692_10006704 3300025898 Bacteria 4682
15 Ga0307515_10009395 3300028794 Bacteria 18921
16 Ga0307515_10156477 3300028794 Bacteria 2349
17 Ga0316176_1100396 3300030732 Bacteria 7858
18 Ga0307513_10010785 3300031456 Bacteria 11419
19 Ga0307513_10043972 3300031456 Bacteria 4898
20 Ga0307514_10004854 3300031649 Bacteria 12229
21 Ga0307516_10035575 3300031730 Bacteria 4995
22 Ga0307405_10027352 3300031731 Bacteria 3305
23 Ga0307413_10000083 3300031824 Bacteria 23507
24 Ga0307407_10025874 3300031903 Bacteria 3100
25 Ga0307409_100010341 3300031995 Bacteria 5794
26 Ga0307409_100021034 3300031995 Bacteria 4463
27 Ga0307416_100030230 3300032002 Bacteria 4061
28 Ga0307411_10003142 3300032005 Bacteria 7576
29 Ga0307415_100036969 3300032126 Bacteria 3205
30 Ga0307507_10017791 3300033179 Bacteria 8134
31 Ga0373956_0017306 3300035119 Bacteria 3037
32 Ga0439436_0000317 3300041404 Bacteria 11815
33 Ga0439436_0001714 3300041404 Bacteria 6418
34 Ga0439457_000025 3300042014 Bacteria 30691
35 Ga0450903_000014 3300042138 Bacteria 34118
36 Ga0439458_0001162 3300042157 Bacteria 6674
37 Ga0466972_0001569 3300044658 Bacteria 11144
38 Ga0466972_0081072 3300044658 Bacteria 1545
39 Ga0466965_0001873 3300044683 Bacteria 8759
40 Ga0466965_0002983 3300044683 Bacteria 7338
41 Ga0466965_0069154 3300044683 Bacteria 1774
42 Ga0466966_0002912 3300044684 Bacteria 11272
43 Ga0466961_0035213 3300044693 Bacteria 3215
44 Ga0466961_0094747 3300044693 Bacteria 1883
45 Ga0466961_0109809 3300044693 Bacteria 1736
46 Ga0466968_0008018 3300044735 Bacteria 4037
47 Ga0466970_0000983 3300044765 Bacteria 13708
48 Ga0466970_0002953 3300044765 Bacteria 8243
49 Ga0466970_0015265 3300044765 Bacteria 3949
50 Ga0466960_0023286 3300044901 Bacteria 2779
51 Ga0466960_0024712 3300044901 Bacteria 2713
52 Ga0466959_0034082 3300045049 Bacteria 3767
53 Ga0466967_0001059 3300045976 Bacteria 15165
54 Ga0466967_0006468 3300045976 Bacteria 8296
55 Ga0466967_0036497 3300045976 Unclassified 4196
56 Ga0466967_0074623 3300045976 Bacteria 3047
57 Ga0495603_0024784 3300046455 Bacteria 3629
58 Ga0495590_0046085 3300046457 Bacteria 1521
59 Ga0495650_0054040 3300046471 Bacteria 1641
60 Ga0495594_0081766 3300046499 Bacteria 1804
61 Ga0495609_0048874 3300046538 Bacteria 1889
62 Ga0495656_0038128 3300046615 Bacteria 1989
63 Ga0495659_0045174 3300046664 Bacteria 1587
64 Ga0495676_0129873 3300047321 Bacteria 1820
65 Ga0495685_003255 3300047447 Bacteria 5171
66 Ga0501031_0015584 3300049568 Bacteria 4935
67 Ga0501033_0001321 3300049570 Bacteria 22055
68 Ga0501034_0051363 3300049571 Bacteria 4157
69 Ga0501034_0051373 3300049571 Bacteria 4157
70 Ga0501036_0034960 3300049572 Bacteria 4250
71 Ga0501037_0008117 3300049573 Bacteria 7694
72 Ga0501038_0002800 3300049574 Bacteria 16233
73 Ga0501038_0102008 3300049574 Bacteria 2388
74 Ga0501039_0066172 3300049575 Bacteria 2805
75 Ga0501039_0149479 3300049575 Bacteria 1835
76 Ga0501042_0008085 3300049578 Bacteria 6923
77 Ga0501042_0050817 3300049578 Bacteria 2957
78 Ga0501043_0012603 3300049579 Bacteria 6613
79 Ga0501043_0030801 3300049579 Bacteria 4219
80 Ga0501046_0009611 3300049580 Bacteria 8342
81 Ga0501046_0042314 3300049580 Bacteria 3632
82 Ga0501047_0044268 3300049581 Bacteria 4300
83 Ga0501048_0011248 3300049582 Bacteria 6673
84 Ga0501070_0021154 3300049586 Bacteria 5460
85 Ga0501073_0168762 3300049589 Bacteria 1515
86 Ga0501080_0024606 3300049742 Bacteria 5583
87 Ga0501035_0002435 3300049822 Bacteria 18190
88 Ga0501044_0006572 3300049823 Bacteria 12839
89 Ga0501044_0063736 3300049823 Bacteria 3764
90 nmdc:mga06z11_76194_c1 3300050494 Bacteria 1788
91 nmdc:mga05p37_138431_c1 3300050507 Bacteria 2983
92 nmdc:mga09592_95531_c1 3300050508 Bacteria 2543
93 nmdc:mga0qj67_291724_c1 3300050509 Unclassified 1322
94 nmdc:mga06r32_10492_c1 3300050510 Bacteria 4289
95 nmdc:mga06r32_229030_c1 3300050510 Unclassified 1846
96 Ga0466962_0068116 3300061719 Bacteria 1699
97 2554259622 2554235005 Bacteria 6457341
98 2583149933 2582580736 Bacteria 5325865
99 2585303442 2582581313 Bacteria 10042643
100 2585316915 2582581314 Bacteria 11452267
101 2643946656 2643221587 Bacteria 7586415
102 2644267935 2643221647 Bacteria 10741251
103 2644389001 2643221670 Bacteria 6497041
104 2644434460 2643221677 Bacteria 7584031
105 2644443610 2643221678 Bacteria 9540101
106 2753073168 2751185734 Bacteria 8863695
107 2776370812 2775506925 Bacteria 7237746
108 2785345819 2784746763 Bacteria 9783172
109 2804843653 2802429296 Bacteria 7227771
110 2808847572 2808606359 Bacteria 9866990
111 2863073200 2863067949 Bacteria 8541735
112 2866555113 2866552031 Bacteria 5824618
113 2866615001 2866612099 Bacteria 7543886
114 2867434254 2867428634 Bacteria 9590268
115 2870723856 2870721527 Bacteria 9689237
116 2877683478 2877676314 Bacteria 9512378
117 2918502439 2918501144 Bacteria 8668083
118 2954011157 2954002825 Bacteria 9173742
119 2954388731 2954380949 Bacteria 10050426
120 2954699519 2954691527 Bacteria 10720516
121 2954702699 2954701450 Bacteria 10834262
122 2954718458 2954711539 Bacteria 10867210
123 2954728428 2954721474 Bacteria 10456478
124 2954733381 2954731030 Bacteria 10243860
125 2954747324 2954740390 Bacteria 10229294
126 2954752264 2954749733 Bacteria 10366972
127 2954766440 2954759201 Bacteria 9358192
128 2995467861 2995463766 Bacteria 8577691
129 2995469642 2995463766 Bacteria 8577691
130 3006487437 3006486233 Bacteria 8157040
131 8025414888 8025413630 Bacteria 7014048
132 8047714962 8047710418 Bacteria 11023148
133 8056211345 8056207758 Bacteria 8639239
134 Ga0439449_0016910
135 Ga0070710_10000902
136 Ga0075367_10088691
137 Ga0075428_100005384
138 Ga0075428_100196153
139 Ga0075430_100044839
140 Ga0075431_100029664
141 Ga0075431_100193672
142 Ga0075429_100012450
143 Ga0099826_10053684
144 Ga0206353_10849700
145 Ga0207426_1000643
146 Ga0207426_1003231
147 Ga0207692_10006704
148 Ga0307515_10009395
149 Ga0307515_10156477
150 Ga0316176_1100396
151 Ga0307513_10010785
152 Ga0307513_10043972
153 Ga0307514_10004854
154 Ga0307516_10035575
155 Ga0307405_10027352
156 Ga0307413_10000083
157 Ga0307407_10025874
158 Ga0307409_100010341
159 Ga0307409_100021034
160 Ga0307416_100030230
161 Ga0307411_10003142
162 Ga0307415_100036969
163 Ga0307507_10017791
164 Ga0373956_0017306
165 Ga0439436_0000317
166 Ga0439436_0001714
167 Ga0439457_000025
168 Ga0450903_000014
169 Ga0439458_0001162
170 Ga0466972_0001569
171 Ga0466972_0081072
172 Ga0466965_0001873
173 Ga0466965_0002983
174 Ga0466965_0069154
175 Ga0466966_0002912
176 Ga0466961_0035213
177 Ga0466961_0094747
178 Ga0466961_0109809
179 Ga0466968_0008018
180 Ga0466970_0000983
181 Ga0466970_0002953
182 Ga0466970_0015265
183 Ga0466960_0023286
184 Ga0466960_0024712
185 Ga0466959_0034082
186 Ga0466967_0001059
187 Ga0466967_0006468
188 Ga0466967_0036497
189 Ga0466967_0074623
190 Ga0495603_0024784
191 Ga0495590_0046085
192 Ga0495650_0054040
193 Ga0495594_0081766
194 Ga0495609_0048874
195 Ga0495656_0038128
196 Ga0495659_0045174
197 Ga0495676_0129873
198 Ga0495685_003255
199 Ga0501031_0015584
200 Ga0501033_0001321
201 Ga0501034_0051363
202 Ga0501034_0051373
203 Ga0501036_0034960
204 Ga0501037_0008117
205 Ga0501038_0002800
206 Ga0501038_0102008
207 Ga0501039_0066172
208 Ga0501039_0149479
209 Ga0501042_0008085
210 Ga0501042_0050817
211 Ga0501043_0012603
212 Ga0501043_0030801
213 Ga0501046_0009611
214 Ga0501046_0042314
215 Ga0501047_0044268
216 Ga0501048_0011248
217 Ga0501070_0021154
218 Ga0501073_0168762
219 Ga0501080_0024606
220 Ga0501035_0002435
221 Ga0501044_0006572
222 Ga0501044_0063736
223 nmdc:mga06z11_76194_c1
224 nmdc:mga05p37_138431_c1
225 nmdc:mga09592_95531_c1
226 nmdc:mga0qj67_291724_c1
227 nmdc:mga06r32_10492_c1
228 nmdc:mga06r32_229030_c1
229 Ga0466962_0068116
230 2554259622
231 2583149933
232 2585303442
233 2585316915
234 2643946656
235 2644267935
236 2644389001
237 2644434460
238 2644443610
239 2753073168
240 2776370812
241 2785345819
242 2804843653
243 2808847572
244 2863073200
245 2866555113
246 2866615001
247 2867434254
248 2870723856
249 2877683478
250 2918502439
251 2954011157
252 2954388731
253 2954699519
254 2954702699
255 2954718458
256 2954728428
257 2954733381
258 2954747324
259 2954752264
260 2954766440
261 2995467861
262 2995469642
263 3006487437
264 8025414888
265 8047714962
266 8056211345

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11700

ATG22

Vacuole effluxer Atg22 like

12

458

0.96

PF07690

MFS_1

Major Facilitator Superfamily

284

477

0.82

PF07690

MFS_1

Major Facilitator Superfamily

32

324

0.79

PF13347

MFS_2

MFS/sugar transport protein

80

450

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6g9x-assembly2.cif.gz_B crystal structure of a mfs transporter at 2.54 angstroem resolution 0.8017 18 450
6t1z-assembly1.cif.gz_A lmrp from l. lactis, in an outward-open conformation, bound to hoechst 33342 0.7997 17 458
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.7873 12 449
6g9x-assembly2.cif.gz_B crystal structure of a mfs transporter at 2.54 angstroem resolution 0.7833 18 450
6t1z-assembly1.cif.gz_A lmrp from l. lactis, in an outward-open conformation, bound to hoechst 33342 0.7795 17 458
ID Description Score Start End Superfamily
af_O06171_250_435_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9432 274 451 1.20.1250.20
af_P25568_311_508_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9412 268 455 1.20.1250.20
af_Q54XU7_308_497_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9087 272 448 1.20.1250.20
af_O01735_368_566_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8965 276 453 1.20.1250.20
af_P0AE16_220_412_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8961 277 460 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A524HEE5-F1-model_v4 MFS transporter 0.9392 152 460 GO:0012505
GO:0016020
GO:0022857
AF-A0A524HEE5-F1-model_v4 MFS transporter 0.9023 152 460 GO:0012505
GO:0016020
GO:0022857
AF-A0A1Z8MQK5-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9008 17 452 GO:0012505
GO:0016020
GO:0022857
AF-A0A4P5TR86-F1-model_v4 MFS transporter 0.8929 17 449 GO:0012505
GO:0016020
GO:0022857
AF-A0A524MXG0-F1-model_v4 MFS transporter 0.8817 274 468 GO:0016020
GO:0022857

Map