F155707

General Info

Members Datasets Scaffolds Average Seq Length
133 97 133 508

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100163812|Ga0068856_1001638122
Length 577
Sequence VKCSGAPLAGLGPAVAATPGRSIRSVSTEPTATASAQGHAVPEREAPPPPKTSGRAVARNTAIFSIATGLSRIAGLVREIVASSYFATSGPFSAFTIAFQVPNVVRSLFADAALGAAFVPVFTEMLEQGRRKEAFRLASALFFLILTVLSAIAVVFILAAGVLMPLFTGGAFSPHLDDLTVGLSRVLFPVVLILALNGLAVGILNAYDHFAIPALSPLVWNAVILLFLVVSHHVLSGDKQLYGYAVGVLVGTAVQFAMALPQLRWLGFRLQFNLHFRDERVRQVLRLMLPVTIGLGLINFNLLINSTLGTLVSAQAGRAIDAAFRIYMLPQGMFSVAIATVLFPALSRLAARRDLDALRALTANGMRQVFLLLVPAAAATLALATPITRLIYQHGAFGPSSTELVSTALFWFAFSLPFSGVNLLLTRTFFSLQRPWITTRIAALNLGVNVAVSVALYQPFGIAGIVVGTAASSAAMTFAQVHFLRRELNGRLETRTTLVAVAQMTAASALLAAVAYGVWYVLDEALGRGLAGQVISVGGGLTMGALAYAVAVHAMGIPEARQIERLVAGRVGRRAKR

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
64 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
65 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
66 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
67 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
68 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
69 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
70 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
71 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
72 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
80 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
81 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
85 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
86 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
87 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
88 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
89 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
90 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
91 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
92 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
93 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
94 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
95 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
96 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
97 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.75
Nodule 0
Rhizoplane 9.02
Rhizosphere 84.21
Stem 0
Stem Tuber 0
Unclassified 6.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10009771 3300003203 Bacteria 4287
2 Ga0070658_10048412 3300005327 Bacteria 3442
3 Ga0070683_100079293 3300005329 Bacteria 3073
4 Ga0070682_100047721 3300005337 Bacteria 2664
5 Ga0070660_100005220 3300005339 Bacteria 8983
6 Ga0070688_100024878 3300005365 Bacteria 3539
7 Ga0070714_100040485 3300005435 Bacteria 3928
8 Ga0070710_10020821 3300005437 Bacteria 3409
9 Ga0070707_100245082 3300005468 Bacteria 1744
10 Ga0070698_100027932 3300005471 Bacteria 5861
11 Ga0070664_100067895 3300005564 Bacteria 3048
12 Ga0070664_100082616 3300005564 Bacteria 2771
13 Ga0068856_100163812 3300005614 Bacteria 2235
14 Ga0070702_100007435 3300005615 Bacteria 5245
15 Ga0081538_10004233 3300005981 Bacteria 13311
16 Ga0081538_10011777 3300005981 Bacteria 7058
17 Ga0081540_1000943 3300005983 Bacteria 26189
18 Ga0081539_10014299 3300005985 Bacteria 5884
19 Ga0075428_100102641 3300006844 Bacteria 3118
20 Ga0075434_100093553 3300006871 Bacteria 3010
21 Ga0068865_100092487 3300006881 Bacteria 2197
22 Ga0105240_10002327 3300009093 Bacteria 30746
23 Ga0111539_10118853 3300009094 Bacteria 3097
24 Ga0105245_10128273 3300009098 Bacteria 2377
25 Ga0105247_10026037 3300009101 Bacteria 3531
26 Ga0105248_10066199 3300009177 Bacteria 4057
27 Ga0105239_10050672 3300010375 Bacteria 4553
28 Ga0157378_10106276 3300013297 Bacteria 2567
29 Ga0157375_10041901 3300013308 Bacteria 4426
30 Ga0213876_10003076 3300021384 Bacteria 9657
31 Ga0213876_10052729 3300021384 Bacteria 2150
32 Ga0213875_10015318 3300021388 Bacteria 3730
33 Ga0207688_10032272 3300025901 Bacteria 2894
34 Ga0207663_10014473 3300025916 Bacteria 4320
35 Ga0207662_10007363 3300025918 Bacteria 5989
36 Ga0207657_10019505 3300025919 Bacteria 6437
37 Ga0207646_10215311 3300025922 Bacteria 1735
38 Ga0207690_10080597 3300025932 Bacteria 2272
39 Ga0207661_10059664 3300025944 Bacteria 3075
40 Ga0207661_10161188 3300025944 Bacteria 1946
41 Ga0207679_10081121 3300025945 Bacteria 2479
42 Ga0207712_10062174 3300025961 Bacteria 2653
43 Ga0207712_10090605 3300025961 Bacteria 2250
44 Ga0207668_10083482 3300025972 Bacteria 2325
45 Ga0207677_10036819 3300026023 Bacteria 3193
46 Ga0207678_10087177 3300026067 Bacteria 2668
47 Ga0207702_10135259 3300026078 Bacteria 2223
48 Ga0207674_10075148 3300026116 Bacteria 3389
49 Ga0207674_10093531 3300026116 Bacteria 2994
50 Ga0207675_100034301 3300026118 Bacteria 4731
51 Ga0207675_100074505 3300026118 Bacteria 3176
52 Ga0207428_10026760 3300027907 Bacteria 4808
53 Ga0207428_10078696 3300027907 Bacteria 2579
54 Ga0268264_10171548 3300028381 Bacteria 1962
55 Ga0307409_100167439 3300031995 Unclassified 1930
56 Ga0307414_10045480 3300032004 Bacteria 3007
57 Ga0307411_10017322 3300032005 Bacteria 4102
58 Ga0395900_0109554 3300037418 Bacteria 2837
59 Ga0395900_0162403 3300037418 Bacteria 2278
60 Ga0395898_0205803 3300037466 Bacteria 1878
61 Ga0436364_0493712 3300037853 Bacteria 4535
62 Ga0436364_0746081 3300037853 Bacteria 5574
63 Ga0436365_0981379 3300039437 Bacteria 2440
64 Ga0436365_1687595 3300039437 Bacteria 5516
65 Ga0451853_0718235 3300041512 Bacteria 2577
66 Ga0466966_0014187 3300044684 Bacteria 5275
67 Ga0466963_0019538 3300044694 Bacteria 4251
68 Ga0466963_0033436 3300044694 Bacteria 3338
69 Ga0466963_0041090 3300044694 Bacteria 3032
70 Ga0466963_0049026 3300044694 Bacteria 2792
71 Ga0466971_0000516 3300044719 Bacteria 15252
72 Ga0466971_0017875 3300044719 Bacteria 3140
73 Ga0466957_0026230 3300044842 Bacteria 3456
74 Ga0466957_0032035 3300044842 Bacteria 3146
75 Ga0466960_0000011 3300044901 Bacteria 60167
76 Ga0466959_0003999 3300045049 Bacteria 9796
77 Ga0466959_0029692 3300045049 Bacteria 4051
78 Ga0466958_0012554 3300045836 Bacteria 4802
79 Ga0466967_0011799 3300045976 Bacteria 6644
80 Ga0466967_0020811 3300045976 Bacteria 5313
81 Ga0466967_0102562 3300045976 Bacteria 2617
82 Ga0466967_0136829 3300045976 Bacteria 2278
83 Ga0466967_0202292 3300045976 Bacteria 1881
84 Ga0495603_0019969 3300046455 Bacteria 4059
85 Ga0495645_0000063 3300046543 Bacteria 74741
86 Ga0496100_0010838 3300048903 Bacteria 5172
87 Ga0496104_0000174 3300048907 Bacteria 57056
88 Ga0496107_0058682 3300048910 Bacteria 2783
89 Ga0496107_0074951 3300048910 Bacteria 2462
90 Ga0496107_0127506 3300048910 Bacteria 1877
91 Ga0496109_0171177 3300048912 Bacteria 2037
92 Ga0496110_0000040 3300048913 Bacteria 62867
93 Ga0496111_0004822 3300048914 Bacteria 8555
94 Ga0496111_0035089 3300048914 Bacteria 3583
95 Ga0496112_0022791 3300048915 Bacteria 5975
96 Ga0496112_0104907 3300048915 Bacteria 2796
97 Ga0496112_0128942 3300048915 Bacteria 2500
98 Ga0501031_0070716 3300049568 Bacteria 2273
99 Ga0501034_0035813 3300049571 Bacteria 5031
100 Ga0501039_0020123 3300049575 Bacteria 5117
101 Ga0501039_0036682 3300049575 Bacteria 3783
102 Ga0501040_0053175 3300049576 Bacteria 2773
103 Ga0501042_0080823 3300049578 Bacteria 2329
104 Ga0501046_0007352 3300049580 Bacteria 9686
105 Ga0501048_0062768 3300049582 Bacteria 2629
106 Ga0501067_0031620 3300049583 Bacteria 2936
107 Ga0501068_0030433 3300049584 Bacteria 3202
108 Ga0501069_0011827 3300049585 Bacteria 4627
109 Ga0501070_0066180 3300049586 Bacteria 2992
110 Ga0501070_0074176 3300049586 Bacteria 2816
111 Ga0501071_0059090 3300049587 Bacteria 2773
112 Ga0501071_0064623 3300049587 Bacteria 2655
113 Ga0501071_0075022 3300049587 Bacteria 2468
114 Ga0501075_0048500 3300049591 Bacteria 3191
115 Ga0501076_0010252 3300049592 Bacteria 6946
116 Ga0501076_0046382 3300049592 Bacteria 3434
117 Ga0501076_0135436 3300049592 Bacteria 1999
118 Ga0501077_0071913 3300049593 Bacteria 2192
119 Ga0501079_0121712 3300049741 Bacteria 2029
120 Ga0501079_0185821 3300049741 Bacteria 1622
121 Ga0501080_0040951 3300049742 Bacteria 4319
122 Ga0501081_0093213 3300049743 Bacteria 2120
123 Ga0501081_0125114 3300049743 Bacteria 1833
124 Ga0501083_0010710 3300049744 Bacteria 6451
125 Ga0501045_0055792 3300049824 Bacteria 2889
126 Ga0495655_0002470 3300053083 Bacteria 2944
127 Ga0500616_0008865 3300053153 Bacteria 6181
128 Ga0501084_0060451 3300054114 Bacteria 3172
129 Ga0501084_0150049 3300054114 Bacteria 1964
130 Ga0501082_0053552 3300060353 Bacteria 3478
131 Ga0501082_0075345 3300060353 Bacteria 2907
132 Ga0466962_0006311 3300061719 Bacteria 5690
133 Ga0530510_0152387 3300061734 Bacteria 1707

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048903 Ga0496100_0010838 Ga0496100_0010838_3433_5079 437
2 3300048910 Ga0496107_0074951 Ga0496107_0074951_420_2066 437
3 3300005365 Ga0070688_100024878 Ga0070688_1000248782 448
4 3300009098 Ga0105245_10128273 Ga0105245_101282732 448
5 3300005615 Ga0070702_100007435 Ga0070702_1000074353 450
6 3300009101 Ga0105247_10026037 Ga0105247_100260373 450
7 3300013308 Ga0157375_10041901 Ga0157375_100419014 450
8 3300025918 Ga0207662_10007363 Ga0207662_100073632 450
9 3300025961 Ga0207712_10062174 Ga0207712_100621742 450
10 3300026116 Ga0207674_10093531 Ga0207674_100935313 450
11 3300028381 Ga0268264_10171548 Ga0268264_101715481 450
12 3300048910 Ga0496107_0127506 Ga0496107_0127506_114_1757 450
13 3300048912 Ga0496109_0171177 Ga0496109_0171177_228_1871 450
14 3300006881 Ga0068865_100092487 Ga0068865_1000924872 452
15 3300049575 Ga0501039_0036682 Ga0501039_0036682_1018_2583 455
16 3300049576 Ga0501040_0053175 Ga0501040_0053175_442_2007 455
17 3300049578 Ga0501042_0080823 Ga0501042_0080823_204_1769 455
18 3300049582 Ga0501048_0062768 Ga0501048_0062768_955_2520 455
19 3300049824 Ga0501045_0055792 Ga0501045_0055792_310_1875 455
20 3300049587 Ga0501071_0064623 Ga0501071_0064623_1067_2620 462
21 3300032004 Ga0307414_10045480 Ga0307414_100454803 463
22 3300026067 Ga0207678_10087177 Ga0207678_100871772 464
23 3300049742 Ga0501080_0040951 Ga0501080_0040951_2491_4155 465
24 3300025972 Ga0207668_10083482 Ga0207668_100834821 466
25 3300026118 Ga0207675_100074505 Ga0207675_1000745052 466
26 3300013297 Ga0157378_10106276 Ga0157378_101062762 467
27 3300039437 Ga0436365_0981379 Ga0436365_0981379_387_1808 470
28 3300037418 Ga0395900_0109554 Ga0395900_0109554_528_2102 472
29 3300005981 Ga0081538_10011777 Ga0081538_100117774 474
30 3300037853 Ga0436364_0746081 Ga0436364_0746081_818_2299 474
31 3300049586 Ga0501070_0066180 Ga0501070_0066180_222_1817 475
32 3300005468 Ga0070707_100245082 Ga0070707_1002450821 476
33 3300025922 Ga0207646_10215311 Ga0207646_102153111 480
34 3300049568 Ga0501031_0070716 Ga0501031_0070716_414_1952 481
35 3300049592 Ga0501076_0046382 Ga0501076_0046382_287_1825 481
36 3300061734 Ga0530510_0152387 Ga0530510_0152387_54_1592 481
37 3300031995 Ga0307409_100167439 Ga0307409_1001674392 484
38 3300046455 Ga0495603_0019969 Ga0495603_0019969_1131_2777 485
39 3300005471 Ga0070698_100027932 Ga0070698_1000279323 487
40 3300021384 Ga0213876_10052729 Ga0213876_100527292 487
41 3300044901 Ga0466960_0000011 Ga0466960_0000011_18552_20156 487
42 3300046543 Ga0495645_0000063 Ga0495645_0000063_9355_10968 488
43 3300048907 Ga0496104_0000174 Ga0496104_0000174_40740_42323 488
44 3300048913 Ga0496110_0000040 Ga0496110_0000040_20575_22158 488
45 3300048914 Ga0496111_0004822 Ga0496111_0004822_5468_7051 488
46 3300053083 Ga0495655_0002470 Ga0495655_0002470_200_1939 488
47 3300025944 Ga0207661_10059664 Ga0207661_100596642 490
48 3300021388 Ga0213875_10015318 Ga0213875_100153182 492
49 3300005564 Ga0070664_100082616 Ga0070664_1000826162 493
50 3300025901 Ga0207688_10032272 Ga0207688_100322722 493
51 3300025944 Ga0207661_10161188 Ga0207661_101611882 493
52 3300025945 Ga0207679_10081121 Ga0207679_100811212 493
53 3300037418 Ga0395900_0162403 Ga0395900_0162403_98_1705 493
54 3300037853 Ga0436364_0493712 Ga0436364_0493712_306_2054 495
55 3300049571 Ga0501034_0035813 Ga0501034_0035813_2729_4342 495
56 3300049580 Ga0501046_0007352 Ga0501046_0007352_817_2430 495
57 3300049583 Ga0501067_0031620 Ga0501067_0031620_460_2073 495
58 3300049584 Ga0501068_0030433 Ga0501068_0030433_658_2271 495
59 3300049585 Ga0501069_0011827 Ga0501069_0011827_680_2293 495
60 3300049586 Ga0501070_0074176 Ga0501070_0074176_690_2303 495
61 3300049744 Ga0501083_0010710 Ga0501083_0010710_2619_4232 495
62 3300060353 Ga0501082_0053552 Ga0501082_0053552_932_2545 495
63 3300005983 Ga0081540_1000943 Ga0081540_10009435 496
64 3300010375 Ga0105239_10050672 Ga0105239_100506722 496
65 3300005437 Ga0070710_10020821 Ga0070710_100208211 498
66 3300025916 Ga0207663_10014473 Ga0207663_100144731 498
67 3300049575 Ga0501039_0020123 Ga0501039_0020123_1361_2974 498
68 3300006844 Ga0075428_100102641 Ga0075428_1001026412 501
69 3300009094 Ga0111539_10118853 Ga0111539_101188533 501
70 3300027907 Ga0207428_10026760 Ga0207428_100267603 501
71 3300027907 Ga0207428_10078696 Ga0207428_100786963 501
72 3300005329 Ga0070683_100079293 Ga0070683_1000792932 502
73 3300005337 Ga0070682_100047721 Ga0070682_1000477212 502
74 3300005564 Ga0070664_100067895 Ga0070664_1000678952 502
75 3300006871 Ga0075434_100093553 Ga0075434_1000935532 502
76 3300021384 Ga0213876_10003076 Ga0213876_100030768 502
77 3300025961 Ga0207712_10090605 Ga0207712_100906052 502
78 3300026116 Ga0207674_10075148 Ga0207674_100751483 502
79 3300039437 Ga0436365_1687595 Ga0436365_1687595_2372_3979 502
80 3300044694 Ga0466963_0019538 Ga0466963_0019538_2001_3521 502
81 3300044694 Ga0466963_0041090 Ga0466963_0041090_1028_2623 502
82 3300044842 Ga0466957_0026230 Ga0466957_0026230_983_2503 502
83 3300045049 Ga0466959_0003999 Ga0466959_0003999_7777_9297 502
84 3300045836 Ga0466958_0012554 Ga0466958_0012554_845_2365 502
85 3300045976 Ga0466967_0020811 Ga0466967_0020811_421_1941 502
86 3300026118 Ga0207675_100034301 Ga0207675_1000343012 504
87 3300045976 Ga0466967_0136829 Ga0466967_0136829_547_2118 504
88 3300044719 Ga0466971_0017875 Ga0466971_0017875_1110_2879 505
89 3300053153 Ga0500616_0008865 Ga0500616_0008865_4142_5770 506
90 3300041512 Ga0451853_0718235 Ga0451853_0718235_749_2317 507
91 3300005981 Ga0081538_10004233 Ga0081538_1000423311 508
92 3300009093 Ga0105240_10002327 Ga0105240_100023274 509
93 3300025932 Ga0207690_10080597 Ga0207690_100805971 509
94 3300037466 Ga0395898_0205803 Ga0395898_0205803_110_1663 509
95 3300049587 Ga0501071_0059090 Ga0501071_0059090_984_2522 512
96 3300049587 Ga0501071_0075022 Ga0501071_0075022_534_2072 512
97 3300049591 Ga0501075_0048500 Ga0501075_0048500_963_2501 512
98 3300049592 Ga0501076_0010252 Ga0501076_0010252_5201_6739 512
99 3300049592 Ga0501076_0135436 Ga0501076_0135436_325_1863 512
100 3300049593 Ga0501077_0071913 Ga0501077_0071913_245_1783 512
101 3300049741 Ga0501079_0121712 Ga0501079_0121712_306_1844 512
102 3300049741 Ga0501079_0185821 Ga0501079_0185821_35_1573 512
103 3300049743 Ga0501081_0093213 Ga0501081_0093213_82_1620 512
104 3300049743 Ga0501081_0125114 Ga0501081_0125114_72_1610 512
105 3300054114 Ga0501084_0060451 Ga0501084_0060451_650_2188 512
106 3300054114 Ga0501084_0150049 Ga0501084_0150049_195_1733 512
107 3300060353 Ga0501082_0075345 Ga0501082_0075345_323_1861 512
108 3300005327 Ga0070658_10048412 Ga0070658_100484123 515
109 3300005339 Ga0070660_100005220 Ga0070660_1000052203 515
110 3300025919 Ga0207657_10019505 Ga0207657_100195052 515
111 3300044694 Ga0466963_0033436 Ga0466963_0033436_1680_3272 515
112 3300044694 Ga0466963_0049026 Ga0466963_0049026_1140_2732 515
113 3300044719 Ga0466971_0000516 Ga0466971_0000516_10139_11743 515
114 3300044842 Ga0466957_0032035 Ga0466957_0032035_622_2226 515
115 3300045049 Ga0466959_0029692 Ga0466959_0029692_1440_3044 515
116 3300045976 Ga0466967_0102562 Ga0466967_0102562_396_1988 515
117 3300061719 Ga0466962_0006311 Ga0466962_0006311_1333_2937 515
118 3300003203 JGI25406J46586_10009771 JGI25406J46586_100097713 516
119 3300005435 Ga0070714_100040485 Ga0070714_1000404853 516
120 3300005614 Ga0068856_100163812 Ga0068856_1001638122 516
121 3300005985 Ga0081539_10014299 Ga0081539_100142993 516
122 3300009177 Ga0105248_10066199 Ga0105248_100661992 516
123 3300026023 Ga0207677_10036819 Ga0207677_100368192 516
124 3300026078 Ga0207702_10135259 Ga0207702_101352592 516
125 3300032005 Ga0307411_10017322 Ga0307411_100173223 516
126 3300044684 Ga0466966_0014187 Ga0466966_0014187_1955_3574 516
127 3300045976 Ga0466967_0011799 Ga0466967_0011799_4976_6622 516
128 3300045976 Ga0466967_0202292 Ga0466967_0202292_181_1755 516
129 3300048910 Ga0496107_0058682 Ga0496107_0058682_594_2204 516
130 3300048914 Ga0496111_0035089 Ga0496111_0035089_992_2602 516
131 3300048915 Ga0496112_0022791 Ga0496112_0022791_1513_3123 516
132 3300048915 Ga0496112_0104907 Ga0496112_0104907_206_1816 516
133 3300048915 Ga0496112_0128942 Ga0496112_0128942_433_2028 516

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03023

MurJ

Lipid II flippase MurJ

82

534

0.93

PF14667

Polysacc_synt_C

Polysaccharide biosynthesis C-terminal domain

408

557

0.88

PF13440

Polysacc_synt_3

Polysaccharide biosynthesis protein

239

395

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
7waw-assembly1.cif.gz_A murj inward closed form 0.9313 6 496
6cc4-assembly1.cif.gz_A structure of murj from escherichia coli 0.9257 13 495
7waw-assembly1.cif.gz_A murj inward closed form 0.9187 6 496
6nc6-assembly2.cif.gz_B lipid ii flippase murj, inward closed conformation 0.9112 4 508
7wag-assembly1.cif.gz_A crystal structure of murj squeezed form 0.9093 13 496
ID Description Score Start End Superfamily
af_Q2G0R7_343_485_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.9144 353 498 1.10.1760.20
af_Q2FXH6_386_533_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.9117 351 497 1.10.1760.20
af_Q9FH21_36_196_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.8999 232 396 1.10.1760.20
af_Q2FXH6_386_533_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.8946 351 497 1.10.1760.20
af_Q2G0R7_343_485_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.8906 353 498 1.10.1760.20
ID Description Score Start End GO Terms
AF-A0A0F9KNA6-F1-model_v4 Polysaccharide biosynthesis protein C-terminal domain-containing protein 0.984 255 511 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-A0A7X7K3F7-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.9776 4 422 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-A0A2D6NVG4-F1-model_v4 Probable lipid II flippase MurJ 0.9738 4 512 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
GO:0071555
AF-A0A0F9KNA6-F1-model_v4 Polysaccharide biosynthesis protein C-terminal domain-containing protein 0.9728 255 511 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-A0A2H0W5M2-F1-model_v4 Probable lipid II flippase MurJ 0.9725 4 506 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
GO:0071555

Feature Viewer

pLDDT pTM Quality
83.78 0.82 High
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Predicted Structure (AlphaFold2)

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