F154428

General Info

Members Datasets Scaffolds Average Seq Length
132 56 128 461

Family's Representative Sequence

Representative Sequence 3300054114|Ga0501084_0092967|Ga0501084_0092967_916_2412
Length 498
Sequence LLLEMAAIYSPFSHAETQNFSHTKLLYNDLMTDLFDHAMQERMKQEAPLAARMRPRTLDEFVGQEHIVGEGKLLRRAIEADRLFSSIILWGPPGTGKTTLAQVIANTTKSHFVTISAILAGKADLRAIIHEALERRRLHNIRTILFVDEVHRWNKAQQDALLPHVEAGVVTLIGATTENPYFEVISALISRSRVFQLRNLNHEETGILIDRALDDKERGYGNKNIKLGADARFHLIDVASGDARNALNALELAVESTPPDKMGVIHITLDVAQESIQRRAVLYDKDGDVHYDTISAFIKSVRGSDPDAALYWLAKMIYAGEDPRFIIRRLIILAGEDIGLADPMGLVIAASAAQAFDYIGLPEGIYPIVEATLYLATAPKSNTAGAYFKAMQRIEQEGQVSVPRHLQDGNRDAAAMGHGKDYVYPHEFEGHFIPQQYLPKRLLGTYFYQPSQEGYESQVTARLDMWREAQRKALGIERRENVPDLSEEKIQEMKRKIK

Samples

Sample ID Description Type Environment
1 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
2 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
3 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
4 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
22 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
25 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
26 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
27 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
28 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
29 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
30 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
31 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
32 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
33 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
36 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
37 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
38 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
39 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
40 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
41 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
42 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
43 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
44 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
45 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
46 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
47 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
48 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
49 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
50 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
51 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
52 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
53 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
54 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
55 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
56 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.97
Metatranscriptomes 0
Isolates 3.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 96.97
Stem 0
Stem Tuber 0
Unclassified 3.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10030473 3300003203 Bacteria 2030
2 Ga0065704_10000442 3300005289 Bacteria 20735
3 Ga0065707_10007352 3300005295 Bacteria 3546
4 Ga0065707_10083623 3300005295 Bacteria 8616
5 Ga0065707_10090674 3300005295 Bacteria 4092
6 Ga0070707_100044566 3300005468 Bacteria 4247
7 Ga0070698_100014481 3300005471 Bacteria 8329
8 Ga0070698_100116730 3300005471 Bacteria 2631
9 Ga0070699_100044999 3300005518 Bacteria 3820
10 Ga0068855_100119466 3300005563 Bacteria 3018
11 Ga0068859_100133176 3300005617 Bacteria 2558
12 Ga0075427_10000158 3300006194 Bacteria 6520
13 Ga0075430_100195899 3300006846 Bacteria 1678
14 Ga0075431_100003192 3300006847 Bacteria 15857
15 Ga0097620_100133171 3300006931 Bacteria 2558
16 Ga0105240_10165482 3300009093 Bacteria 2623
17 Ga0114129_10007935 3300009147 Bacteria 15111
18 Ga0114129_10038089 3300009147 Bacteria 6784
19 Ga0114129_10075811 3300009147 Bacteria 4683
20 Ga0114129_10297078 3300009147 Bacteria 2154
21 Ga0105249_10058588 3300009553 Bacteria 3530
22 Ga0105239_10022371 3300010375 Bacteria 6969
23 Ga0213876_10002203 3300021384 Bacteria 11500
24 Ga0207667_10097830 3300025949 Bacteria 3028
25 Ga0207712_10098791 3300025961 Bacteria 2166
26 Ga0265323_10025809 3300028653 Bacteria 2219
27 Ga0265320_10031912 3300031240 Bacteria 2702
28 Ga0265340_10009081 3300031247 Bacteria 5346
29 Ga0265327_10044794 3300031251 Bacteria 2356
30 Ga0265316_10000972 3300031344 Bacteria 31191
31 Ga0316575_10030247 3300031665 Unclassified 2116
32 Ga0316579_10010546 3300031691 Bacteria 3909
33 Ga0316576_10054736 3300031727 Bacteria 2910
34 Ga0316576_10061769 3300031727 Bacteria 2747
35 Ga0316578_10003177 3300031728 Bacteria 7441
36 Ga0316578_10013006 3300031728 Bacteria 4400
37 Ga0316578_10098509 3300031728 Unclassified 1751
38 Ga0316577_10002173 3300031733 Bacteria 9617
39 Ga0316577_10002697 3300031733 Bacteria 8834
40 Ga0316577_10008700 3300031733 Bacteria 5440
41 Ga0316577_10023195 3300031733 Bacteria 3446
42 Ga0316574_0024173 3300035398 Bacteria 3634
43 Ga0316574_0024739 3300035398 Bacteria 3597
44 Ga0373927_0003320 3300035695 Bacteria 11573
45 Ga0316582_0001057 3300036647 Bacteria 11551
46 Ga0316582_0001204 3300036647 Bacteria 11100
47 Ga0316582_0007821 3300036647 Bacteria 5712
48 Ga0316582_0045286 3300036647 Bacteria 2770
49 Ga0316582_0045666 3300036647 Bacteria 2759
50 Ga0316584_0004375 3300036712 Bacteria 9347
51 Ga0316584_0005726 3300036712 Bacteria 8371
52 Ga0316584_0023838 3300036712 Bacteria 4471
53 Ga0373925_0000825 3300037068 Bacteria 28543
54 Ga0316581_0003402 3300037588 Unclassified 3958
55 Ga0400483_254614 3300039062 Bacteria 2138
56 Ga0400489_08345 3300039093 Bacteria 5952
57 Ga0436365_0429918 3300039437 Bacteria 26467
58 Ga0451577_0000004 3300042876 Bacteria 816743
59 Ga0451577_0000476 3300042876 Bacteria 68574
60 Ga0451577_0001356 3300042876 Bacteria 33037
61 Ga0451577_0004622 3300042876 Bacteria 14459
62 Ga0451577_0011591 3300042876 Bacteria 8330
63 Ga0451577_0037524 3300042876 Bacteria 4361
64 Ga0451577_0056129 3300042876 Bacteria 3512
65 Ga0451577_0081760 3300042876 Bacteria 2881
66 Ga0451577_0082334 3300042876 Bacteria 2871
67 Ga0451577_0144150 3300042876 Bacteria 2141
68 Ga0451577_0177432 3300042876 Bacteria 1921
69 Ga0453683_0000747 3300044673 Bacteria 32801
70 Ga0453683_0000992 3300044673 Bacteria 26761
71 Ga0453683_0002226 3300044673 Bacteria 15340
72 Ga0453683_0005947 3300044673 Bacteria 8413
73 Ga0453683_0006779 3300044673 Bacteria 7824
74 Ga0453683_0011074 3300044673 Bacteria 5961
75 Ga0453683_0045939 3300044673 Bacteria 2738
76 Ga0453684_0000007 3300044712 Bacteria 1301482
77 Ga0453684_0000023 3300044712 Bacteria 857153
78 Ga0453684_0000025 3300044712 Bacteria 818638
79 Ga0453684_0000026 3300044712 Bacteria 792958
80 Ga0453684_0000117 3300044712 Bacteria 348119
81 Ga0453684_0000197 3300044712 Bacteria 264445
82 Ga0453684_0000271 3300044712 Bacteria 223654
83 Ga0453684_0000513 3300044712 Bacteria 149882
84 Ga0453684_0000564 3300044712 Bacteria 139611
85 Ga0453684_0002099 3300044712 Bacteria 50321
86 Ga0453684_0002623 3300044712 Bacteria 42980
87 Ga0453684_0004087 3300044712 Bacteria 31691
88 Ga0453684_0006705 3300044712 Bacteria 21723
89 Ga0453684_0008020 3300044712 Bacteria 19108
90 Ga0453684_0009342 3300044712 Bacteria 17186
91 Ga0453684_0011607 3300044712 Bacteria 14717
92 Ga0453684_0027020 3300044712 Bacteria 8256
93 Ga0453684_0035638 3300044712 Bacteria 6875
94 Ga0453684_0036828 3300044712 Bacteria 6733
95 Ga0453684_0047005 3300044712 Bacteria 5730
96 Ga0453684_0064987 3300044712 Bacteria 4656
97 Ga0453684_0067441 3300044712 Bacteria 4549
98 Ga0453684_0067795 3300044712 Bacteria 4536
99 Ga0453684_0129406 3300044712 Bacteria 3031
100 Ga0453684_0155029 3300044712 Bacteria 2717
101 Ga0453684_0197636 3300044712 Bacteria 2346
102 Ga0453684_0210620 3300044712 Bacteria 2259
103 Ga0453684_0224839 3300044712 Bacteria 2171
104 Ga0453684_0242635 3300044712 Bacteria 2073
105 Ga0453684_0253740 3300044712 Bacteria 2019
106 Ga0451576_0000050 3300045051 Bacteria 315118
107 Ga0451576_0000164 3300045051 Bacteria 168460
108 Ga0451576_0044265 3300045051 Bacteria 4693
109 Ga0451576_0157884 3300045051 Bacteria 2366
110 Ga0451576_0164076 3300045051 Bacteria 2318
111 Ga0501073_0014399 3300049589 Bacteria 5747
112 Ga0501073_0015926 3300049589 Bacteria 5449
113 Ga0501075_0020362 3300049591 Bacteria 4825
114 Ga0501076_0167204 3300049592 Bacteria 1793
115 Ga0501080_0006361 3300049742 Bacteria 10596
116 nmdc:mga05p37_13131_c1 3300050507 Bacteria 9916
117 nmdc:mga05p37_18163_c1 3300050507 Bacteria 8497
118 nmdc:mga05p37_372121_c1 3300050507 Bacteria 1676
119 nmdc:mga05p37_49920_c1 3300050507 Bacteria 5146
120 nmdc:mga05p37_51317_c1 3300050507 Bacteria 5073
121 nmdc:mga05p37_80041_c1 3300050507 Bacteria 4024
122 nmdc:mga09592_130381_c1 3300050508 Bacteria 2163
123 nmdc:mga0qj67_50169_c1 3300050509 Bacteria 3299
124 nmdc:mga06r32_177646_c1 3300050510 Bacteria 2114
125 nmdc:mga06r32_8621_c1 3300050510 Bacteria 9193
126 nmdc:mga0a205_159449_c1 3300050515 Bacteria 2153
127 Ga0501084_0000709 3300054114 Bacteria 25468
128 Ga0501084_0092967 3300054114 Bacteria 2532

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0000004 Ga0451577_0000004_262236_263438 396
2 3300044712 Ga0453684_0000025 Ga0453684_0000025_262264_263466 396
3 3300044673 Ga0453683_0000992 Ga0453683_0000992_4024_5268 398
4 3300044712 Ga0453684_0000026 Ga0453684_0000026_259735_260979 398
5 3300045051 Ga0451576_0000050 Ga0451576_0000050_54168_55412 398
6 3300042876 Ga0451577_0037524 Ga0451577_0037524_308_1777 420
7 3300042876 Ga0451577_0000476 Ga0451577_0000476_33798_35195 421
8 3300044712 Ga0453684_0000197 Ga0453684_0000197_216122_217519 421
9 3300039062 Ga0400483_254614 Ga0400483_254614_572_1900 430
10 3300010375 Ga0105239_10022371 Ga0105239_100223714 435
11 iso_pu_bacteria 2964375228 2964378132 436
12 3300035695 Ga0373927_0003320 Ga0373927_0003320_7585_8904 437
13 3300037068 Ga0373925_0000825 Ga0373925_0000825_17393_18712 437
14 3300021384 Ga0213876_10002203 Ga0213876_1000220311 438
15 3300031344 Ga0265316_10000972 Ga0265316_100009724 438
16 3300039093 Ga0400489_08345 Ga0400489_08345_478_1821 438
17 iso_pu_bacteria 2711768088 2712198118 438
18 iso_pu_bacteria 2831905167 2831906697 438
19 3300031691 Ga0316579_10010546 Ga0316579_100105462 440
20 3300031727 Ga0316576_10054736 Ga0316576_100547362 440
21 3300031728 Ga0316578_10003177 Ga0316578_100031772 440
22 3300031733 Ga0316577_10002173 Ga0316577_100021735 440
23 3300031733 Ga0316577_10008700 Ga0316577_100087002 440
24 3300036647 Ga0316582_0007821 Ga0316582_0007821_348_1697 440
25 3300044712 Ga0453684_0155029 Ga0453684_0155029_1360_2700 441
26 3300050508 nmdc:mga09592_130381_c1 nmdc:mga09592_130381_c1_15_1355 441
27 iso_pu_bacteria 2554235469 2556062801 441
28 3300009093 Ga0105240_10165482 Ga0105240_101654822 443
29 3300009147 Ga0114129_10075811 Ga0114129_100758112 443
30 3300031665 Ga0316575_10030247 Ga0316575_100302472 445
31 3300031728 Ga0316578_10098509 Ga0316578_100985091 445
32 3300036647 Ga0316582_0001057 Ga0316582_0001057_3715_5103 445
33 3300036712 Ga0316584_0005726 Ga0316584_0005726_5327_6715 445
34 3300037588 Ga0316581_0003402 Ga0316581_0003402_1063_2451 445
35 3300039437 Ga0436365_0429918 Ga0436365_0429918_14788_16281 445
36 3300044712 Ga0453684_0224839 Ga0453684_0224839_588_1985 445
37 3300044712 Ga0453684_0036828 Ga0453684_0036828_43_1449 446
38 3300005563 Ga0068855_100119466 Ga0068855_1001194662 448
39 3300025949 Ga0207667_10097830 Ga0207667_100978303 448
40 3300042876 Ga0451577_0001356 Ga0451577_0001356_10152_11573 448
41 3300044712 Ga0453684_0000117 Ga0453684_0000117_4597_6018 448
42 3300044712 Ga0453684_0008020 Ga0453684_0008020_13612_14958 448
43 3300031728 Ga0316578_10013006 Ga0316578_100130062 449
44 3300036712 Ga0316584_0023838 Ga0316584_0023838_2890_4293 449
45 3300031727 Ga0316576_10061769 Ga0316576_100617691 450
46 3300031733 Ga0316577_10002697 Ga0316577_100026976 452
47 3300035398 Ga0316574_0024173 Ga0316574_0024173_741_2171 452
48 3300036712 Ga0316584_0004375 Ga0316584_0004375_1241_2653 452
49 3300044712 Ga0453684_0002623 Ga0453684_0002623_36377_37735 452
50 3300042876 Ga0451577_0144150 Ga0451577_0144150_522_1883 453
51 3300044712 Ga0453684_0027020 Ga0453684_0027020_4738_6099 453
52 3300006847 Ga0075431_100003192 Ga0075431_1000031924 454
53 3300044712 Ga0453684_0210620 Ga0453684_0210620_735_2099 454
54 3300050510 nmdc:mga06r32_8621_c1 nmdc:mga06r32_8621_c1_6715_8130 454
55 3300044673 Ga0453683_0045939 Ga0453683_0045939_472_1878 455
56 3300044712 Ga0453684_0000271 Ga0453684_0000271_200592_201998 455
57 3300044712 Ga0453684_0253740 Ga0453684_0253740_491_1879 460
58 3300042876 Ga0451577_0177432 Ga0451577_0177432_290_1675 461
59 3300044712 Ga0453684_0000513 Ga0453684_0000513_72163_73614 461
60 3300049589 Ga0501073_0014399 Ga0501073_0014399_4226_5641 461
61 3300049589 Ga0501073_0015926 Ga0501073_0015926_3408_4823 461
62 3300049742 Ga0501080_0006361 Ga0501080_0006361_8292_9707 461
63 3300054114 Ga0501084_0000709 Ga0501084_0000709_19585_21000 461
64 3300031733 Ga0316577_10023195 Ga0316577_100231954 462
65 3300035398 Ga0316574_0024739 Ga0316574_0024739_140_1558 462
66 3300036647 Ga0316582_0001204 Ga0316582_0001204_3138_4562 462
67 3300036647 Ga0316582_0045286 Ga0316582_0045286_164_1579 462
68 3300036647 Ga0316582_0045666 Ga0316582_0045666_49_1464 462
69 3300050509 nmdc:mga0qj67_50169_c1 nmdc:mga0qj67_50169_c1_27_1451 462
70 3300005289 Ga0065704_10000442 Ga0065704_1000044219 463
71 3300005295 Ga0065707_10007352 Ga0065707_100073521 463
72 3300005295 Ga0065707_10083623 Ga0065707_100836239 463
73 3300005295 Ga0065707_10090674 Ga0065707_100906743 463
74 3300005468 Ga0070707_100044566 Ga0070707_1000445665 463
75 3300005471 Ga0070698_100014481 Ga0070698_1000144818 463
76 3300005471 Ga0070698_100116730 Ga0070698_1001167301 463
77 3300005518 Ga0070699_100044999 Ga0070699_1000449994 463
78 3300005617 Ga0068859_100133176 Ga0068859_1001331763 463
79 3300006194 Ga0075427_10000158 Ga0075427_100001582 463
80 3300006846 Ga0075430_100195899 Ga0075430_1001958992 463
81 3300006931 Ga0097620_100133171 Ga0097620_1001331712 463
82 3300009147 Ga0114129_10007935 Ga0114129_100079357 463
83 3300009147 Ga0114129_10038089 Ga0114129_100380892 463
84 3300009147 Ga0114129_10297078 Ga0114129_102970781 463
85 3300009553 Ga0105249_10058588 Ga0105249_100585883 463
86 3300025961 Ga0207712_10098791 Ga0207712_100987912 463
87 3300028653 Ga0265323_10025809 Ga0265323_100258092 463
88 3300031240 Ga0265320_10031912 Ga0265320_100319122 463
89 3300031247 Ga0265340_10009081 Ga0265340_100090814 463
90 3300031251 Ga0265327_10044794 Ga0265327_100447942 463
91 3300042876 Ga0451577_0004622 Ga0451577_0004622_11375_12784 463
92 3300042876 Ga0451577_0011591 Ga0451577_0011591_1214_2623 463
93 3300042876 Ga0451577_0056129 Ga0451577_0056129_1873_3279 463
94 3300042876 Ga0451577_0081760 Ga0451577_0081760_62_1471 463
95 3300042876 Ga0451577_0082334 Ga0451577_0082334_228_1634 463
96 3300044673 Ga0453683_0000747 Ga0453683_0000747_24135_25544 463
97 3300044673 Ga0453683_0002226 Ga0453683_0002226_13495_14904 463
98 3300044673 Ga0453683_0005947 Ga0453683_0005947_6241_7647 463
99 3300044673 Ga0453683_0006779 Ga0453683_0006779_4389_5798 463
100 3300044673 Ga0453683_0011074 Ga0453683_0011074_440_1849 463
101 3300044712 Ga0453684_0000007 Ga0453684_0000007_494332_495741 463
102 3300044712 Ga0453684_0000023 Ga0453684_0000023_18266_19675 463
103 3300044712 Ga0453684_0000564 Ga0453684_0000564_15366_16775 463
104 3300044712 Ga0453684_0002099 Ga0453684_0002099_37815_39245 463
105 3300044712 Ga0453684_0004087 Ga0453684_0004087_25544_26974 463
106 3300044712 Ga0453684_0006705 Ga0453684_0006705_3226_4635 463
107 3300044712 Ga0453684_0009342 Ga0453684_0009342_6486_7892 463
108 3300044712 Ga0453684_0011607 Ga0453684_0011607_6868_8277 463
109 3300044712 Ga0453684_0035638 Ga0453684_0035638_3606_5015 463
110 3300044712 Ga0453684_0047005 Ga0453684_0047005_1034_2443 463
111 3300044712 Ga0453684_0064987 Ga0453684_0064987_777_2183 463
112 3300044712 Ga0453684_0067441 Ga0453684_0067441_1156_2565 463
113 3300044712 Ga0453684_0067795 Ga0453684_0067795_2865_4271 463
114 3300044712 Ga0453684_0129406 Ga0453684_0129406_628_2037 463
115 3300044712 Ga0453684_0197636 Ga0453684_0197636_643_2049 463
116 3300044712 Ga0453684_0242635 Ga0453684_0242635_189_1595 463
117 3300045051 Ga0451576_0000164 Ga0451576_0000164_36494_37900 463
118 3300045051 Ga0451576_0044265 Ga0451576_0044265_292_1701 463
119 3300045051 Ga0451576_0157884 Ga0451576_0157884_596_2002 463
120 3300045051 Ga0451576_0164076 Ga0451576_0164076_535_1986 463
121 3300049591 Ga0501075_0020362 Ga0501075_0020362_2843_4249 463
122 3300049592 Ga0501076_0167204 Ga0501076_0167204_232_1638 463
123 3300050507 nmdc:mga05p37_13131_c1 nmdc:mga05p37_13131_c1_6945_8402 463
124 3300050507 nmdc:mga05p37_18163_c1 nmdc:mga05p37_18163_c1_1706_3115 463
125 3300050507 nmdc:mga05p37_372121_c1 nmdc:mga05p37_372121_c1_257_1663 463
126 3300050507 nmdc:mga05p37_49920_c1 nmdc:mga05p37_49920_c1_3150_4556 463
127 3300050507 nmdc:mga05p37_51317_c1 nmdc:mga05p37_51317_c1_2527_3933 463
128 3300050507 nmdc:mga05p37_80041_c1 nmdc:mga05p37_80041_c1_753_2162 463
129 3300050510 nmdc:mga06r32_177646_c1 nmdc:mga06r32_177646_c1_414_1820 463
130 3300050515 nmdc:mga0a205_159449_c1 nmdc:mga0a205_159449_c1_82_1491 463
131 3300054114 Ga0501084_0092967 Ga0501084_0092967_916_2412 463
132 3300003203 JGI25406J46586_10030473 JGI25406J46586_100304732 464

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16193

AAA_assoc_2

AAA C-terminal domain

221

302

0.98

PF12002

MgsA_C

MgsA AAA+ ATPase C terminal

303

467

0.97

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

87

200

0.84

PF05496

RuvB_N

Holliday junction DNA helicase RuvB P-loop domain

53

185

0.83

PF07728

AAA_5

AAA domain (dynein-related subfamily)

86

196

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ctd-assembly1.cif.gz_A-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9635 260 428
3ctd-assembly1.cif.gz_B-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9614 260 430
3ctd-assembly1.cif.gz_B-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9496 260 430
3ctd-assembly1.cif.gz_A-2 crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris 0.9448 260 428
2r9g-assembly5.cif.gz_I crystal structure of the c-terminal fragment of aaa atpase from enterococcus faecium 0.9249 258 439
ID Description Score Start End Superfamily
3pvsB03 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9808 257 349 1.20.272.10
af_Q8IIN7_541_638_1.20.272.10 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9798 259 351 1.20.272.10
3bgeA01 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9761 257 351 1.20.272.10
af_Q2FXU8_142_215_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9664 170 242 1.10.8.60
3pvsC03 Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; 0.9567 253 349 1.20.272.10
ID Description Score Start End GO Terms
AF-A0A661GG47-F1-model_v4 Recombination factor protein RarA 0.9917 23 185 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A7V1QAL4-F1-model_v4 AAA family ATPase 0.9864 16 185 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A661GG47-F1-model_v4 Recombination factor protein RarA 0.9856 23 185 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116
AF-A0A3B9RLT2-F1-model_v4 deleted 0.9845 16 171
AF-A0A3C0Q801-F1-model_v4 Recombination factor protein RarA 0.9835 17 186 GO:0000731
GO:0005524
GO:0006261
GO:0008047
GO:0016887
GO:0017116

Feature Viewer

pLDDT pTM Quality
84.79 0.51 Medium
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Predicted Structure (AlphaFold2)

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