F151443

General Info

Members Datasets Scaffolds Average Seq Length
132 95 132 383

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10148017|Ga0070658_101480172
Length 412
Sequence MTVLHFNLVQTAISPIFRVFPPLRQAAAPEVNWLAMVTSMEHLKAAERKPLLPKARSYKGEVVYIYAFDVAYEMVRQPVRAQFVVDASKRSPRHLFFYRPQMVRLPALERIGPSGPMRVERVVKLLPVGAISITMRVPFEVERIEDLVGYHDLQFSNGSLHDEVRRLAEEVRRELSPYYVRPIPQLADEEAYTVFCIESPVLSQDGAALNAEHWWRANRRGVASLLTQEPDIDHLSRQEADESTGRYLSYYEHDLVVVDWDAALIMDERQNFDETLYVMELANLQLAELEAYDRILDNSLERAYRDLTSRPTRGRANILRELRELRIDLARFSDELSNITKFFGDWHLARIYENLSARFHLTDWHRTLDGKLKTLDDLYQLLNHDRINRWMLILEVTIVLLFVIDLVILFVK

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
46 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
47 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
50 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
51 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
52 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
60 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
64 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
73 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
77 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
81 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
88 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.76
Rhizosphere 99.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10148017 3300005327 Unclassified 1965
2 Ga0070676_10124747 3300005328 Bacteria 1621
3 Ga0070666_10164732 3300005335 Unclassified 1550
4 Ga0070660_100034029 3300005339 Bacteria 3847
5 Ga0070689_100008029 3300005340 Bacteria 7411
6 Ga0070691_10031191 3300005341 Bacteria 2499
7 Ga0070675_100075418 3300005354 Bacteria 2803
8 Ga0070673_100247982 3300005364 Unclassified 1551
9 Ga0070688_100008977 3300005365 Bacteria 5447
10 Ga0070714_100018586 3300005435 Bacteria 5650
11 Ga0070694_100000907 3300005444 Bacteria 16750
12 Ga0070708_100092955 3300005445 Unclassified 2749
13 Ga0070681_10033810 3300005458 Bacteria 5132
14 Ga0070681_10126870 3300005458 Bacteria 2484
15 Ga0070672_100105468 3300005543 Bacteria 2291
16 Ga0070686_100006627 3300005544 Bacteria 6445
17 Ga0068855_100105459 3300005563 Bacteria 3240
18 Ga0068857_100018891 3300005577 Bacteria 6048
19 Ga0068852_100368405 3300005616 Bacteria 1407
20 Ga0068859_100039005 3300005617 Bacteria 4764
21 Ga0068860_100003033 3300005843 Bacteria 17341
22 Ga0068860_100153543 3300005843 Bacteria 2218
23 Ga0097620_100039005 3300006931 Bacteria 4764
24 Ga0099794_10012314 3300007265 Bacteria 3687
25 Ga0105240_10005476 3300009093 Bacteria 18920
26 Ga0105240_10057533 3300009093 Bacteria 4857
27 Ga0105240_10098497 3300009093 Bacteria 3560
28 Ga0105240_10148978 3300009093 Bacteria 2789
29 Ga0105240_10197120 3300009093 Unclassified 2363
30 Ga0111539_10016015 3300009094 Bacteria 9308
31 Ga0111539_10081055 3300009094 Bacteria 3817
32 Ga0105238_10022435 3300009551 Bacteria 6433
33 Ga0105238_10165480 3300009551 Bacteria 2187
34 Ga0157372_10313677 3300013307 Bacteria 1825
35 Ga0157375_10000045 3300013308 Bacteria 151387
36 Ga0163163_10000010 3300014325 Bacteria 264773
37 Ga0157376_10191257 3300014969 Bacteria 1877
38 Ga0157376_10388063 3300014969 Unclassified 1347
39 Ga0207645_10125320 3300025907 Bacteria 1669
40 Ga0207705_10115964 3300025909 Unclassified 1983
41 Ga0207707_10024395 3300025912 Bacteria 5292
42 Ga0207695_10035852 3300025913 Bacteria 5370
43 Ga0207695_10050703 3300025913 Bacteria 4363
44 Ga0207657_10076537 3300025919 Bacteria 2822
45 Ga0207694_10031643 3300025924 Bacteria 4043
46 Ga0207694_10110441 3300025924 Bacteria 2187
47 Ga0207659_10188216 3300025926 Bacteria 1641
48 Ga0207686_10067114 3300025934 Bacteria 2294
49 Ga0207670_10004642 3300025936 Bacteria 7443
50 Ga0207691_10021020 3300025940 Bacteria 6167
51 Ga0207651_10214574 3300025960 Bacteria 1552
52 Ga0207703_10357942 3300026035 Unclassified 1345
53 Ga0207702_10016150 3300026078 Bacteria 6181
54 Ga0207674_10026091 3300026116 Bacteria 6216
55 Ga0268264_10018219 3300028381 Bacteria 5743
56 Ga0265337_1008662 3300028556 Bacteria 3680
57 Ga0265334_10014529 3300028573 Bacteria 3281
58 Ga0265336_10013142 3300028666 Bacteria 2767
59 Ga0265338_10000726 3300028800 Bacteria 56154
60 Ga0265338_10015092 3300028800 Bacteria 8524
61 Ga0265338_10027037 3300028800 Bacteria 5768
62 Ga0265338_10049821 3300028800 Bacteria 3791
63 Ga0265324_10000532 3300029957 Bacteria 26132
64 Ga0265324_10018217 3300029957 Bacteria 2544
65 Ga0265324_10026437 3300029957 Unclassified 2054
66 Ga0265328_10010093 3300031239 Bacteria 3816
67 Ga0265320_10062203 3300031240 Bacteria 1778
68 Ga0265340_10082505 3300031247 Bacteria 1512
69 Ga0265339_10003701 3300031249 Bacteria 10662
70 Ga0265327_10002437 3300031251 Bacteria 19635
71 Ga0265316_10093954 3300031344 Unclassified 2285
72 Ga0265314_10000042 3300031711 Bacteria 215775
73 Ga0265314_10001650 3300031711 Bacteria 24431
74 Ga0307406_10119246 3300031901 Bacteria 1831
75 Ga0307409_100274024 3300031995 Bacteria 1556
76 Ga0373954_0001125 3300035118 Bacteria 10723
77 Ga0373956_0031420 3300035119 Bacteria 2327
78 Ga0373935_0183821 3300035692 Unclassified 1436
79 Ga0373937_0117900 3300036401 Bacteria 2473
80 Ga0316582_0198882 3300036647 Unclassified 1367
81 Ga0373925_0001405 3300037068 Bacteria 20911
82 Ga0373925_0005413 3300037068 Bacteria 9512
83 Ga0395905_0032070 3300037471 Unclassified 4942
84 Ga0395905_0176347 3300037471 Bacteria 2007
85 Ga0395901_0288309 3300038443 Unclassified 1704
86 Ga0451577_0001201 3300042876 Bacteria 36309
87 Ga0451577_0024208 3300042876 Bacteria 5525
88 Ga0451577_0047600 3300042876 Bacteria 3834
89 Ga0453684_0003538 3300044712 Bacteria 34940
90 Ga0453684_0334690 3300044712 Bacteria 1711
91 Ga0451576_0030655 3300045051 Bacteria 5745
92 Ga0451576_0144444 3300045051 Bacteria 2481
93 Ga0451576_0163481 3300045051 Bacteria 2323
94 Ga0451576_0210578 3300045051 Bacteria 2030
95 Ga0451576_0217546 3300045051 Bacteria 1995
96 Ga0451576_0255457 3300045051 Bacteria 1832
97 Ga0495592_0000008 3300046454 Bacteria 175382
98 Ga0495651_0020504 3300046462 Bacteria 5132
99 Ga0495664_0141873 3300046477 Unclassified 1457
100 Ga0495608_0105920 3300046511 Unclassified 1810
101 Ga0495628_0007183 3300046516 Bacteria 9644
102 Ga0495630_0000043 3300046517 Bacteria 104062
103 Ga0495630_0005553 3300046517 Bacteria 8898
104 Ga0495630_0131092 3300046517 Unclassified 1904
105 Ga0495666_0008974 3300046526 Bacteria 5003
106 Ga0495666_0019765 3300046526 Bacteria 3339
107 Ga0495586_0000077 3300046535 Bacteria 60087
108 Ga0495586_0001608 3300046535 Bacteria 12409
109 Ga0495586_0005271 3300046535 Bacteria 6917
110 Ga0495645_0024296 3300046543 Bacteria 4396
111 Ga0495645_0062211 3300046543 Unclassified 2704
112 Ga0495645_0164577 3300046543 Bacteria 1531
113 Ga0495634_0010363 3300046642 Bacteria 6830
114 Ga0495657_0018771 3300046675 Bacteria 4998
115 Ga0495599_0025185 3300046678 Bacteria 3724
116 Ga0495658_0011579 3300046683 Unclassified 4442
117 Ga0495613_0140908 3300046689 Unclassified 1723
118 Ga0495624_0060152 3300046690 Bacteria 2382
119 Ga0495624_0122241 3300046690 Bacteria 1598
120 Ga0495581_0009353 3300047315 Bacteria 5671
121 Ga0495674_0027129 3300047319 Bacteria 5238
122 Ga0495674_0061519 3300047319 Bacteria 3272
123 Ga0495676_0026366 3300047321 Bacteria 5004
124 Ga0495684_0008548 3300047471 Bacteria 7928
125 Ga0495684_0132457 3300047471 Bacteria 1871
126 Ga0496115_0017364 3300048918 Bacteria 5500
127 Ga0501034_0021926 3300049571 Bacteria 6508
128 Ga0501037_0000737 3300049573 Bacteria 24864
129 Ga0501038_0000081 3300049574 Bacteria 81017
130 Ga0501073_0021476 3300049589 Bacteria 4654
131 Ga0501044_0148464 3300049823 Unclassified 2328
132 nmdc:mga08y16_75892_c1 3300050511 Bacteria 3503

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048918 Ga0496115_0017364 Ga0496115_0017364_3406_4407 326
2 3300035692 Ga0373935_0183821 Ga0373935_0183821_11_1012 329
3 3300031901 Ga0307406_10119246 Ga0307406_101192461 335
4 3300025934 Ga0207686_10067114 Ga0207686_100671142 349
5 3300029957 Ga0265324_10026437 Ga0265324_100264372 349
6 3300031240 Ga0265320_10062203 Ga0265320_100622031 351
7 3300031995 Ga0307409_100274024 Ga0307409_1002740241 353
8 3300026035 Ga0207703_10357942 Ga0207703_103579422 356
9 3300038443 Ga0395901_0288309 Ga0395901_0288309_93_1208 357
10 3300045051 Ga0451576_0030655 Ga0451576_0030655_1153_2268 359
11 3300049571 Ga0501034_0021926 Ga0501034_0021926_469_1671 359
12 3300049573 Ga0501037_0000737 Ga0501037_0000737_19590_20792 359
13 3300049823 Ga0501044_0148464 Ga0501044_0148464_495_1697 359
14 3300014969 Ga0157376_10388063 Ga0157376_103880631 360
15 3300005563 Ga0068855_100105459 Ga0068855_1001054593 361
16 3300005843 Ga0068860_100003033 Ga0068860_10000303314 362
17 3300028381 Ga0268264_10018219 Ga0268264_100182192 362
18 3300009551 Ga0105238_10022435 Ga0105238_100224356 363
19 3300009551 Ga0105238_10165480 Ga0105238_101654803 363
20 3300025924 Ga0207694_10031643 Ga0207694_100316432 363
21 3300025924 Ga0207694_10110441 Ga0207694_101104412 363
22 3300026078 Ga0207702_10016150 Ga0207702_100161502 363
23 3300028556 Ga0265337_1008662 Ga0265337_10086622 363
24 3300028666 Ga0265336_10013142 Ga0265336_100131422 363
25 3300029957 Ga0265324_10000532 Ga0265324_1000053215 363
26 3300029957 Ga0265324_10018217 Ga0265324_100182172 363
27 3300037068 Ga0373925_0001405 Ga0373925_0001405_13370_14488 363
28 3300047315 Ga0495581_0009353 Ga0495581_0009353_685_1818 364
29 3300005616 Ga0068852_100368405 Ga0068852_1003684052 365
30 3300028800 Ga0265338_10049821 Ga0265338_100498213 365
31 3300045051 Ga0451576_0144444 Ga0451576_0144444_261_1427 367
32 3300028800 Ga0265338_10015092 Ga0265338_100150924 368
33 3300031249 Ga0265339_10003701 Ga0265339_100037012 368
34 3300031344 Ga0265316_10093954 Ga0265316_100939543 368
35 3300036647 Ga0316582_0198882 Ga0316582_0198882_172_1338 370
36 3300046543 Ga0495645_0062211 Ga0495645_0062211_111_1253 371
37 3300046689 Ga0495613_0140908 Ga0495613_0140908_456_1598 371
38 3300047471 Ga0495684_0132457 Ga0495684_0132457_162_1304 371
39 3300049589 Ga0501073_0021476 Ga0501073_0021476_1731_2891 371
40 3300042876 Ga0451577_0047600 Ga0451577_0047600_2640_3788 372
41 3300005335 Ga0070666_10164732 Ga0070666_101647321 373
42 3300005364 Ga0070673_100247982 Ga0070673_1002479822 373
43 3300005617 Ga0068859_100039005 Ga0068859_1000390053 373
44 3300006931 Ga0097620_100039005 Ga0097620_1000390053 373
45 3300009093 Ga0105240_10057533 Ga0105240_100575337 373
46 3300013307 Ga0157372_10313677 Ga0157372_103136772 373
47 3300013308 Ga0157375_10000045 Ga0157375_10000045111 373
48 3300025913 Ga0207695_10050703 Ga0207695_100507032 373
49 3300031247 Ga0265340_10082505 Ga0265340_100825052 373
50 3300031251 Ga0265327_10002437 Ga0265327_1000243714 373
51 3300031711 Ga0265314_10001650 Ga0265314_1000165021 373
52 3300046454 Ga0495592_0000008 Ga0495592_0000008_15426_16574 373
53 3300046516 Ga0495628_0007183 Ga0495628_0007183_5983_7131 373
54 3300046526 Ga0495666_0019765 Ga0495666_0019765_837_1985 373
55 3300046535 Ga0495586_0001608 Ga0495586_0001608_5178_6326 373
56 3300046690 Ga0495624_0060152 Ga0495624_0060152_167_1315 373
57 3300047319 Ga0495674_0027129 Ga0495674_0027129_716_1864 373
58 3300049574 Ga0501038_0000081 Ga0501038_0000081_5468_6670 373
59 3300009093 Ga0105240_10005476 Ga0105240_1000547614 374
60 3300025913 Ga0207695_10035852 Ga0207695_100358526 374
61 3300045051 Ga0451576_0210578 Ga0451576_0210578_867_2018 374
62 3300005341 Ga0070691_10031191 Ga0070691_100311912 375
63 3300005458 Ga0070681_10126870 Ga0070681_101268702 375
64 3300009093 Ga0105240_10098497 Ga0105240_100984973 375
65 3300009094 Ga0111539_10016015 Ga0111539_100160153 375
66 3300028800 Ga0265338_10027037 Ga0265338_100270372 375
67 3300046511 Ga0495608_0105920 Ga0495608_0105920_91_1260 375
68 3300046690 Ga0495624_0122241 Ga0495624_0122241_427_1581 375
69 3300005340 Ga0070689_100008029 Ga0070689_1000080293 376
70 3300005365 Ga0070688_100008977 Ga0070688_1000089773 376
71 3300025936 Ga0207670_10004642 Ga0207670_100046423 376
72 3300005328 Ga0070676_10124747 Ga0070676_101247472 377
73 3300005354 Ga0070675_100075418 Ga0070675_1000754181 377
74 3300005435 Ga0070714_100018586 Ga0070714_1000185862 377
75 3300005444 Ga0070694_100000907 Ga0070694_10000090714 377
76 3300005445 Ga0070708_100092955 Ga0070708_1000929552 377
77 3300005458 Ga0070681_10033810 Ga0070681_100338103 377
78 3300005543 Ga0070672_100105468 Ga0070672_1001054682 377
79 3300005544 Ga0070686_100006627 Ga0070686_1000066273 377
80 3300005577 Ga0068857_100018891 Ga0068857_1000188912 377
81 3300007265 Ga0099794_10012314 Ga0099794_100123144 377
82 3300009093 Ga0105240_10148978 Ga0105240_101489783 377
83 3300009093 Ga0105240_10197120 Ga0105240_101971201 377
84 3300009094 Ga0111539_10081055 Ga0111539_100810552 377
85 3300014325 Ga0163163_10000010 Ga0163163_1000001056 377
86 3300014969 Ga0157376_10191257 Ga0157376_101912572 377
87 3300025907 Ga0207645_10125320 Ga0207645_101253201 377
88 3300025912 Ga0207707_10024395 Ga0207707_100243953 377
89 3300025926 Ga0207659_10188216 Ga0207659_101882161 377
90 3300025940 Ga0207691_10021020 Ga0207691_100210204 377
91 3300025960 Ga0207651_10214574 Ga0207651_102145741 377
92 3300026116 Ga0207674_10026091 Ga0207674_100260911 377
93 3300028573 Ga0265334_10014529 Ga0265334_100145291 377
94 3300028800 Ga0265338_10000726 Ga0265338_1000072615 377
95 3300031239 Ga0265328_10010093 Ga0265328_100100933 377
96 3300031711 Ga0265314_10000042 Ga0265314_1000004290 377
97 3300035118 Ga0373954_0001125 Ga0373954_0001125_7609_8772 377
98 3300035119 Ga0373956_0031420 Ga0373956_0031420_625_1788 377
99 3300036401 Ga0373937_0117900 Ga0373937_0117900_591_1754 377
100 3300037068 Ga0373925_0005413 Ga0373925_0005413_4254_5420 377
101 3300037471 Ga0395905_0176347 Ga0395905_0176347_199_1374 377
102 3300044712 Ga0453684_0334690 Ga0453684_0334690_314_1477 377
103 3300045051 Ga0451576_0163481 Ga0451576_0163481_1025_2191 377
104 3300045051 Ga0451576_0255457 Ga0451576_0255457_549_1712 377
105 3300046462 Ga0495651_0020504 Ga0495651_0020504_686_1849 377
106 3300046477 Ga0495664_0141873 Ga0495664_0141873_13_1176 377
107 3300046517 Ga0495630_0000043 Ga0495630_0000043_86972_88138 377
108 3300046517 Ga0495630_0005553 Ga0495630_0005553_1684_2859 377
109 3300046517 Ga0495630_0131092 Ga0495630_0131092_213_1376 377
110 3300046526 Ga0495666_0008974 Ga0495666_0008974_760_1926 377
111 3300046535 Ga0495586_0000077 Ga0495586_0000077_15941_17107 377
112 3300046535 Ga0495586_0005271 Ga0495586_0005271_258_1421 377
113 3300046543 Ga0495645_0024296 Ga0495645_0024296_1524_2684 377
114 3300046543 Ga0495645_0164577 Ga0495645_0164577_132_1298 377
115 3300046642 Ga0495634_0010363 Ga0495634_0010363_2171_3337 377
116 3300046675 Ga0495657_0018771 Ga0495657_0018771_2737_3903 377
117 3300046678 Ga0495599_0025185 Ga0495599_0025185_1317_2480 377
118 3300046683 Ga0495658_0011579 Ga0495658_0011579_27_1190 377
119 3300047319 Ga0495674_0061519 Ga0495674_0061519_1327_2490 377
120 3300047321 Ga0495676_0026366 Ga0495676_0026366_1185_2351 377
121 3300047471 Ga0495684_0008548 Ga0495684_0008548_3651_4826 377
122 3300050511 nmdc:mga08y16_75892_c1 nmdc:mga08y16_75892_c1_95_1261 377
123 3300042876 Ga0451577_0024208 Ga0451577_0024208_287_1450 378
124 3300042876 Ga0451577_0001201 Ga0451577_0001201_26466_27632 379
125 3300044712 Ga0453684_0003538 Ga0453684_0003538_30950_32116 379
126 3300045051 Ga0451576_0217546 Ga0451576_0217546_31_1209 383
127 3300037471 Ga0395905_0032070 Ga0395905_0032070_627_1826 389
128 3300005843 Ga0068860_100153543 Ga0068860_1001535432 391
129 3300005327 Ga0070658_10148017 Ga0070658_101480172 412
130 3300005339 Ga0070660_100034029 Ga0070660_1000340292 412
131 3300025909 Ga0207705_10115964 Ga0207705_101159641 412
132 3300025919 Ga0207657_10076537 Ga0207657_100765372 412

Structural Annotation

Top 5 Hits

ID Description Score Start End
2lm9-assembly1.cif.gz_A the nmr structure of a major allergen from dust mite 0.6919 285 385
2lm9-assembly1.cif.gz_A the nmr structure of a major allergen from dust mite 0.6697 285 385
8fvt-assembly1.cif.gz_B multi-state design of two-state switchable hinge proteins 0.6332 279 376
4z9q-assembly1.cif.gz_A crystal structure of oxa-58 with disordered active site 0.6325 100 138
7e40-assembly2.cif.gz_D mechanism of phosphate sensing and signaling revealed by rice spx1-phr2 complex structure 0.6207 278 382
ID Description Score Start End Superfamily
5jtgB02 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7488 278 379 1.20.58.340
af_Q4CMV4_1_134_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7201 275 391 1.20.58.340
5jtgD02 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.7163 278 379 1.20.58.340
af_Q9C0W7_760_874_3.30.310.10 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;TATA-Binding Protein 0.7039 100 137 3.30.310.10
af_Q54JK6_141_315_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.6952 262 368 1.20.58.340
ID Description Score Start End GO Terms
AF-A0A359EUM8-F1-model_v4 Uncharacterized protein 0.9063 278 409 GO:0016020
AF-E8PQ19-F1-model_v4 DUF155 domain-containing protein 0.8987 234 407
AF-A0A349UJJ8-F1-model_v4 DUF155 domain-containing protein 0.8966 66 409 GO:0016020
AF-A0A357BWR2-F1-model_v4 DUF155 domain-containing protein 0.8942 57 411 GO:0016020
AF-A0A352N2P9-F1-model_v4 Uncharacterized protein 0.8918 57 408 GO:0016020

Feature Viewer

pLDDT pTM Quality
76.34 0.74 High
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Predicted Structure (AlphaFold2)

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