F149694

General Info

Members Datasets Scaffolds Average Seq Length
131 77 262 559

Family's Representative Sequence

Representative Sequence 3300031238|Ga0265332_10000208|Ga0265332_1000020831
Length 595
Sequence MKLTGAQLITTLLEHQGIETIAGIPGGANLPMYDALHDSRIRHVLARHEQGAGFIAQGMARASGLPAVCFGTSGPGATNLLTAIADAKLDSIPLVTITGQVPRAMIGTDAFQEIDTYGLTIPITKHNYLVRSAAALLDVIPDAFRVAMSGRPGPVVVDVPKDVQNEPIEIDALPAPGRADPPPRWRTEDISAAAALINAAQRPVLLIGAGIISANAGAAVRRLAETASIPVVATLLGLGAMPATHPLFLGMVGMHAARCTNLLLEECDLLIALGVRFDDRATGKAAAFCPHAKILHVDIDASELGKIKQPLLGIEADVGAVLQALDGQVDATPRHAWLLHMGRLRAAHPLAMPGADDPLAPYGIIRHVAALVGDDAIVTSDVGQHQMWVAQAFPFSRPRQWLTSGGLGTMGFGLPAAIGAALAQPDRTVVCFTGDGSLLMNVQELATAAEAGVNVKVILLNNGHLGLVRQQQELFYGARYSASRFHTAPDFAAIARGFGIAAQDLNGAGDPIATLARNLRAPGPCLINVPIAAEANVYPMVPPGAANRDMIGPAAGGPAAGVSSMARSPLGHYGLPSQTASVSARDAASPRCQEE

Samples

Sample ID Description Type Environment
1 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
2 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
4 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
5 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
6 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
7 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
8 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
9 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
10 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
13 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
14 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
15 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
16 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
17 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
18 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
19 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
20 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
21 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
22 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
23 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
24 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
25 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
26 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
27 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
28 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
29 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
30 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
31 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
32 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
33 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
34 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
35 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
36 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
37 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
38 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
39 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
40 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
41 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
42 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
43 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
44 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
45 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
46 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
47 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
50 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
51 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
52 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
53 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
54 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
55 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
63 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
64 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
65 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
66 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
67 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
68 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
69 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
70 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
71 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
72 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
73 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
74 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
75 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
76 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
77 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.71
Metatranscriptomes 0
Isolates 2.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 4.58
Rhizoplane 0
Rhizosphere 81.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265332_10000208 3300031238 Bacteria 47535
2 Ga0081539_10062402 3300005985 Bacteria 2037
3 Ga0075431_100066905 3300006847 Bacteria 3709
4 Ga0075429_100080730 3300006880 Bacteria 2836
5 Ga0079104_1000449 3300006946 Bacteria 46645
6 Ga0079104_1001058 3300006946 Bacteria 20821
7 Ga0079104_1007563 3300006946 Bacteria 3911
8 Ga0114129_10050498 3300009147 Bacteria 5841
9 Ga0114129_10070953 3300009147 Bacteria 4857
10 Ga0114129_10190657 3300009147 Bacteria 2784
11 Ga0105237_10022547 3300009545 Bacteria 6460
12 Ga0157379_10001223 3300014968 Bacteria 20861
13 Ga0213872_10007559 3300021361 Bacteria 5337
14 Ga0213872_10030754 3300021361 Bacteria 2460
15 Ga0207671_10013685 3300025914 Bacteria 6445
16 Ga0207659_10108047 3300025926 Bacteria 2110
17 Ga0209281_1000544 3300027111 Bacteria 47223
18 Ga0209281_1000658 3300027111 Bacteria 36963
19 Ga0209281_1001240 3300027111 Bacteria 16740
20 Ga0265326_10005216 3300028558 Bacteria 4096
21 Ga0265338_10017097 3300028800 Bacteria 7839
22 Ga0265338_10046841 3300028800 Bacteria 3957
23 Ga0307511_10040998 3300030521 Bacteria 3919
24 Ga0265328_10012824 3300031239 Bacteria 3331
25 Ga0265320_10012789 3300031240 Bacteria 4864
26 Ga0265320_10012956 3300031240 Bacteria 4819
27 Ga0265320_10033865 3300031240 Bacteria 2605
28 Ga0265329_10005403 3300031242 Bacteria 5166
29 Ga0265329_10005495 3300031242 Bacteria 5117
30 Ga0265340_10000293 3300031247 Bacteria 26209
31 Ga0265331_10000206 3300031250 Bacteria 71313
32 Ga0265316_10000184 3300031344 Bacteria 71395
33 Ga0265316_10003101 3300031344 Bacteria 16930
34 Ga0265316_10004559 3300031344 Bacteria 13760
35 Ga0265316_10048962 3300031344 Bacteria 3331
36 Ga0265314_10000367 3300031711 Bacteria 61942
37 Ga0265342_10000114 3300031712 Bacteria 88429
38 Ga0265342_10003164 3300031712 Bacteria 13709
39 Ga0265342_10043811 3300031712 Bacteria 2699
40 Ga0316576_10032616 3300031727 Bacteria 3702
41 Ga0316578_10051595 3300031728 Bacteria 2409
42 Ga0373926_0011792 3300035083 Bacteria 2949
43 Ga0373923_0016945 3300035111 Bacteria 2779
44 Ga0373954_0002730 3300035118 Bacteria 7429
45 Ga0373956_0001825 3300035119 Bacteria 8786
46 Ga0373935_0009405 3300035692 Bacteria 5847
47 Ga0373927_0023884 3300035695 Bacteria 3999
48 Ga0373933_0011375 3300035724 Bacteria 4902
49 Ga0373947_0036046 3300035725 Bacteria 2931
50 Ga0373947_0066491 3300035725 Bacteria 2200
51 Ga0373937_0039934 3300036401 Bacteria 4277
52 Ga0373937_0042625 3300036401 Bacteria 4141
53 Ga0373937_0058329 3300036401 Bacteria 3546
54 Ga0373925_0004040 3300037068 Bacteria 11143
55 Ga0400490_10692 3300038726 Bacteria 16671
56 Ga0400490_27517 3300038726 Bacteria 2179
57 Ga0400490_34952 3300038726 Bacteria 24779
58 Ga0400490_59347 3300038726 Bacteria 18142
59 Ga0400491_07616 3300038727 Bacteria 3820
60 Ga0400485_04042 3300038735 Bacteria 23120
61 Ga0400486_04029 3300038742 Bacteria 63930
62 Ga0400483_159720 3300039062 Bacteria 13670
63 Ga0400483_160650 3300039062 Bacteria 1991
64 Ga0400483_170638 3300039062 Bacteria 2871
65 Ga0400483_273826 3300039062 Bacteria 2103
66 Ga0400489_95379 3300039093 Bacteria 5981
67 Ga0400487_09910 3300039110 Bacteria 16509
68 Ga0400487_56445 3300039110 Bacteria 32953
69 Ga0436361_0007247 3300039447 Bacteria 3284
70 Ga0436361_0410722 3300039447 Bacteria 2065
71 Ga0436361_0438154 3300039447 Bacteria 7535
72 Ga0436362_1261797 3300039453 Bacteria 2390
73 Ga0451577_0000020 3300042876 Bacteria 477488
74 Ga0451577_0000359 3300042876 Bacteria 84975
75 Ga0451577_0000566 3300042876 Bacteria 60294
76 Ga0451577_0013683 3300042876 Bacteria 7583
77 Ga0451577_0030203 3300042876 Bacteria 4897
78 Ga0451577_0056652 3300042876 Bacteria 3496
79 Ga0451577_0075278 3300042876 Bacteria 3011
80 Ga0451577_0110817 3300042876 Bacteria 2455
81 Ga0466965_0023387 3300044683 Bacteria 2984
82 Ga0466961_0006193 3300044693 Bacteria 7596
83 Ga0453684_0000090 3300044712 Bacteria 391614
84 Ga0453684_0000275 3300044712 Bacteria 222374
85 Ga0453684_0000396 3300044712 Bacteria 179548
86 Ga0453684_0001101 3300044712 Bacteria 84975
87 Ga0453684_0002370 3300044712 Bacteria 46026
88 Ga0453684_0008781 3300044712 Bacteria 17936
89 Ga0453684_0011358 3300044712 Bacteria 14962
90 Ga0453684_0013093 3300044712 Bacteria 13542
91 Ga0453684_0025475 3300044712 Bacteria 8587
92 Ga0453684_0040923 3300044712 Bacteria 6281
93 Ga0453684_0184082 3300044712 Bacteria 2450
94 Ga0451576_0000885 3300045051 Bacteria 56916
95 Ga0451576_0001050 3300045051 Bacteria 50847
96 Ga0451576_0005649 3300045051 Bacteria 15617
97 Ga0451576_0021353 3300045051 Bacteria 7035
98 Ga0451576_0024843 3300045051 Bacteria 6465
99 Ga0451576_0057187 3300045051 Bacteria 4077
100 Ga0451576_0205095 3300045051 Bacteria 2059
101 Ga0495580_0003942 3300046472 Bacteria 12523
102 Ga0495672_0010299 3300047320 Bacteria 6679
103 Ga0496122_0097715 3300048925 Bacteria 1975
104 Ga0496126_0000043 3300048929 Bacteria 337789
105 Ga0501036_0027916 3300049572 Bacteria 4772
106 Ga0501038_0005385 3300049574 Bacteria 11892
107 Ga0501039_0003583 3300049575 Bacteria 11642
108 Ga0501040_0001066 3300049576 Bacteria 17355
109 Ga0501041_0001665 3300049577 Bacteria 12443
110 Ga0501042_0000681 3300049578 Bacteria 18367
111 Ga0501047_0117179 3300049581 Bacteria 2545
112 Ga0501048_0012737 3300049582 Bacteria 6254
113 Ga0501071_0047944 3300049587 Bacteria 3070
114 Ga0501072_0000963 3300049588 Bacteria 21237
115 Ga0501074_0060862 3300049590 Bacteria 2720
116 Ga0501075_0004954 3300049591 Bacteria 9075
117 Ga0501076_0002783 3300049592 Bacteria 12114
118 Ga0501077_0000989 3300049593 Bacteria 17098
119 Ga0501077_0021863 3300049593 Bacteria 4050
120 Ga0501079_0008185 3300049741 Bacteria 7922
121 Ga0501045_0002885 3300049824 Bacteria 11740
122 nmdc:mga05p37_14682_c1 3300050507 Bacteria 9409
123 nmdc:mga05p37_250090_c1 3300050507 Bacteria 2127
124 nmdc:mga09592_96587_c1 3300050508 Bacteria 2528
125 nmdc:mga08y16_164981_c1 3300050511 Bacteria 2301
126 Ga0501084_0021247 3300054114 Bacteria 5412
127 Ga0501084_0033730 3300054114 Bacteria 4282
128 Ga0501082_0009641 3300060353 Bacteria 8311
129 2524001181 2523533628 Bacteria 4098242
130 2788437678 2786546940 Bacteria 6396474
131 2891634677 2891633521 Bacteria 4602265
132 Ga0265332_10000208
133 Ga0081539_10062402
134 Ga0075431_100066905
135 Ga0075429_100080730
136 Ga0079104_1000449
137 Ga0079104_1001058
138 Ga0079104_1007563
139 Ga0114129_10050498
140 Ga0114129_10070953
141 Ga0114129_10190657
142 Ga0105237_10022547
143 Ga0157379_10001223
144 Ga0213872_10007559
145 Ga0213872_10030754
146 Ga0207671_10013685
147 Ga0207659_10108047
148 Ga0209281_1000544
149 Ga0209281_1000658
150 Ga0209281_1001240
151 Ga0265326_10005216
152 Ga0265338_10017097
153 Ga0265338_10046841
154 Ga0307511_10040998
155 Ga0265328_10012824
156 Ga0265320_10012789
157 Ga0265320_10012956
158 Ga0265320_10033865
159 Ga0265329_10005403
160 Ga0265329_10005495
161 Ga0265340_10000293
162 Ga0265331_10000206
163 Ga0265316_10000184
164 Ga0265316_10003101
165 Ga0265316_10004559
166 Ga0265316_10048962
167 Ga0265314_10000367
168 Ga0265342_10000114
169 Ga0265342_10003164
170 Ga0265342_10043811
171 Ga0316576_10032616
172 Ga0316578_10051595
173 Ga0373926_0011792
174 Ga0373923_0016945
175 Ga0373954_0002730
176 Ga0373956_0001825
177 Ga0373935_0009405
178 Ga0373927_0023884
179 Ga0373933_0011375
180 Ga0373947_0036046
181 Ga0373947_0066491
182 Ga0373937_0039934
183 Ga0373937_0042625
184 Ga0373937_0058329
185 Ga0373925_0004040
186 Ga0400490_10692
187 Ga0400490_27517
188 Ga0400490_34952
189 Ga0400490_59347
190 Ga0400491_07616
191 Ga0400485_04042
192 Ga0400486_04029
193 Ga0400483_159720
194 Ga0400483_160650
195 Ga0400483_170638
196 Ga0400483_273826
197 Ga0400489_95379
198 Ga0400487_09910
199 Ga0400487_56445
200 Ga0436361_0007247
201 Ga0436361_0410722
202 Ga0436361_0438154
203 Ga0436362_1261797
204 Ga0451577_0000020
205 Ga0451577_0000359
206 Ga0451577_0000566
207 Ga0451577_0013683
208 Ga0451577_0030203
209 Ga0451577_0056652
210 Ga0451577_0075278
211 Ga0451577_0110817
212 Ga0466965_0023387
213 Ga0466961_0006193
214 Ga0453684_0000090
215 Ga0453684_0000275
216 Ga0453684_0000396
217 Ga0453684_0001101
218 Ga0453684_0002370
219 Ga0453684_0008781
220 Ga0453684_0011358
221 Ga0453684_0013093
222 Ga0453684_0025475
223 Ga0453684_0040923
224 Ga0453684_0184082
225 Ga0451576_0000885
226 Ga0451576_0001050
227 Ga0451576_0005649
228 Ga0451576_0021353
229 Ga0451576_0024843
230 Ga0451576_0057187
231 Ga0451576_0205095
232 Ga0495580_0003942
233 Ga0495672_0010299
234 Ga0496122_0097715
235 Ga0496126_0000043
236 Ga0501036_0027916
237 Ga0501038_0005385
238 Ga0501039_0003583
239 Ga0501040_0001066
240 Ga0501041_0001665
241 Ga0501042_0000681
242 Ga0501047_0117179
243 Ga0501048_0012737
244 Ga0501071_0047944
245 Ga0501072_0000963
246 Ga0501074_0060862
247 Ga0501075_0004954
248 Ga0501076_0002783
249 Ga0501077_0000989
250 Ga0501077_0021863
251 Ga0501079_0008185
252 Ga0501045_0002885
253 nmdc:mga05p37_14682_c1
254 nmdc:mga05p37_250090_c1
255 nmdc:mga09592_96587_c1
256 nmdc:mga08y16_164981_c1
257 Ga0501084_0021247
258 Ga0501084_0033730
259 Ga0501082_0009641
260 2524001181
261 2788437678
262 2891634677

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00205

TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

190

325

0.99

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

381

529

0.97

PF02776

TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

3

119

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lpi-assembly1.cif.gz_A crystal structure of ahas holo-enzyme 0.9602 1 545
6lpi-assembly4.cif.gz_D crystal structure of ahas holo-enzyme 0.959 1 545
6lpi-assembly1.cif.gz_A crystal structure of ahas holo-enzyme 0.9585 1 545
6lpi-assembly4.cif.gz_D crystal structure of ahas holo-enzyme 0.9572 1 545
6lpi-assembly2.cif.gz_B crystal structure of ahas holo-enzyme 0.957 2 545
ID Description Score Start End Superfamily
af_D2DJQ3_61_255_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.981 1 168 3.40.50.970
af_P07342_83_280_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9773 4 168 3.40.50.970
af_B0G117_40_223_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9682 3 165 3.40.50.970
af_P0DP89_1_170_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9653 3 173 3.40.50.970
af_P9WG39_1_179_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9651 1 168 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A7Y2VF85-F1-model_v4 Acetolactate synthase large subunit (EC 2.2.1.6) 0.9774 3 159 GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A3N5UJ56-F1-model_v4 Thiamine pyrophosphate-binding protein 0.9769 1 168 GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A3D0W481-F1-model_v4 Acetolactate synthase 3 large subunit (EC 2.2.1.6) 0.9756 3 150 GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-A0A800FYS0-F1-model_v4 Thiamine pyrophosphate enzyme N-terminal TPP-binding domain-containing protein 0.9755 1 169 GO:0003984
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660
AF-Q0CL07-F1-model_v4 Thiamine pyrophosphate enzyme N-terminal TPP-binding domain-containing protein 0.9754 3 166 GO:0003984
GO:0005739
GO:0005948
GO:0009097
GO:0009099
GO:0030976
GO:0050660

Map