F146982

General Info

Members Datasets Scaffolds Average Seq Length
130 109 260 273

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0000245|Ga0501034_0000245_88152_89147
Length 331
Sequence MPGLWMRTGAGKNDETLFHFPGRDHMATTDMPRTHGDGNVKFKQKTNGTRLREESLLKREEVRLAGHKDNGTRKLKQKEYDKKLRRLQEELCTLQDWVKHKGVRVVILFEGRDGAGKGGTIRAITERVSPRVFRVVALPAPSDRERTQMYMQRYMMHFPAAGEIVIFDRSWYNRAGVEYVMGFCTPKQCRRFLEICPQVERYMVESGIILLKYWLEVSNKEQERRFMARIHDPLRQWKLSPMDLPSREKWYEYSRARDRMLEATDTPNAPWFIVPSDDKKRARLNCISHLLKQIPYKSVPREKIRLPDRSKKGAYDDAATLKGRHFVPEKY

Samples

Sample ID Description Type Environment
1 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
73 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
74 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
75 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
76 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
77 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
99 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
108 2511231017 Pseudomonas sp. GM55 Isolate Nodule
109 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.69
Metatranscriptomes 0.77
Isolates 1.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.54
Rhizoplane 6.92
Rhizosphere 89.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501034_0000245 3300049571 Bacteria 100221
2 Ga0065712_10136328 3300005290 Bacteria 1494
3 Ga0070666_10211257 3300005335 Bacteria 1367
4 Ga0070668_100028317 3300005347 Bacteria 4254
5 Ga0070668_100058602 3300005347 Bacteria 2980
6 Ga0070669_100155703 3300005353 Bacteria 1772
7 Ga0070671_100016922 3300005355 Bacteria 5897
8 Ga0070667_100139956 3300005367 Bacteria 2118
9 Ga0070708_100000395 3300005445 Bacteria 33002
10 Ga0070663_100082869 3300005455 Bacteria 2361
11 Ga0070678_100008307 3300005456 Bacteria 6215
12 Ga0070681_10018229 3300005458 Bacteria 7016
13 Ga0070706_100001429 3300005467 Bacteria 25231
14 Ga0070699_100043654 3300005518 Bacteria 3880
15 Ga0070697_100000445 3300005536 Bacteria 31745
16 Ga0070672_100272242 3300005543 Bacteria 1430
17 Ga0070695_100205458 3300005545 Bacteria 1410
18 Ga0070696_100103820 3300005546 Bacteria 2040
19 Ga0070693_100000007 3300005547 Bacteria 85509
20 Ga0070665_100013454 3300005548 Bacteria 8231
21 Ga0070665_100057652 3300005548 Bacteria 3893
22 Ga0070704_100002257 3300005549 Bacteria 10754
23 Ga0070704_100008211 3300005549 Bacteria 6245
24 Ga0068857_100474557 3300005577 Bacteria 1172
25 Ga0068859_100108588 3300005617 Bacteria 2836
26 Ga0068859_100403622 3300005617 Bacteria 1463
27 Ga0068861_100176688 3300005719 Bacteria 1774
28 Ga0068858_100164814 3300005842 Bacteria 2088
29 Ga0068860_100071393 3300005843 Bacteria 3300
30 Ga0081540_1000023 3300005983 Bacteria 159665
31 Ga0097621_100026562 3300006237 Bacteria 4544
32 Ga0075428_100284648 3300006844 Bacteria 1778
33 Ga0075430_100100070 3300006846 Bacteria 2421
34 Ga0075431_100006519 3300006847 Bacteria 11590
35 Ga0075431_100025861 3300006847 Bacteria 6016
36 Ga0075433_10243602 3300006852 Bacteria 1596
37 Ga0075434_100387720 3300006871 Bacteria 1418
38 Ga0097620_100108591 3300006931 Bacteria 2836
39 Ga0097620_100403573 3300006931 Bacteria 1463
40 Ga0099795_10022628 3300007788 Bacteria 2077
41 Ga0111539_10211500 3300009094 Bacteria 2260
42 Ga0114129_10243510 3300009147 Bacteria 2417
43 Ga0105248_10223048 3300009177 Bacteria 2122
44 Ga0105248_10225733 3300009177 Bacteria 2108
45 Ga0105248_10273898 3300009177 Bacteria 1900
46 Ga0099796_10017966 3300010159 Bacteria 2116
47 Ga0105239_10382647 3300010375 Bacteria 1591
48 Ga0157374_10065132 3300013296 Bacteria 3422
49 Ga0157378_10001227 3300013297 Bacteria 23172
50 Ga0163162_10049253 3300013306 Bacteria 4222
51 Ga0163162_10108768 3300013306 Bacteria 2869
52 Ga0157372_10467679 3300013307 Bacteria 1470
53 Ga0157375_10288064 3300013308 Bacteria 1805
54 Ga0157380_10018305 3300014326 Bacteria 5198
55 Ga0157377_10149879 3300014745 Bacteria 1441
56 Ga0157376_10315377 3300014969 Bacteria 1485
57 Ga0213872_10043328 3300021361 Bacteria 2051
58 Ga0207680_10086662 3300025903 Bacteria 1981
59 Ga0207707_10286367 3300025912 Bacteria 1426
60 Ga0207663_10174764 3300025916 Bacteria 1529
61 Ga0207649_10359353 3300025920 Bacteria 1080
62 Ga0207644_10007973 3300025931 Bacteria 6925
63 Ga0207665_10153048 3300025939 Bacteria 1654
64 Ga0207691_10293867 3300025940 Bacteria 1397
65 Ga0207711_10023313 3300025941 Bacteria 5180
66 Ga0207711_10141783 3300025941 Bacteria 2163
67 Ga0207711_10271654 3300025941 Bacteria 1560
68 Ga0207668_10048310 3300025972 Bacteria 2920
69 Ga0207668_10150301 3300025972 Bacteria 1802
70 Ga0207640_10139753 3300025981 Bacteria 1764
71 Ga0207674_10578160 3300026116 Bacteria 1085
72 Ga0207675_100212138 3300026118 Bacteria 1863
73 Ga0207683_10017443 3300026121 Bacteria 6119
74 Ga0207683_10167724 3300026121 Bacteria 1987
75 Ga0207683_10341254 3300026121 Bacteria 1374
76 Ga0209969_1023594 3300027360 Bacteria 922
77 Ga0207428_10260696 3300027907 Bacteria 1291
78 Ga0268266_10006743 3300028379 Bacteria 10469
79 Ga0268266_10127988 3300028379 Bacteria 2268
80 Ga0268264_10183416 3300028381 Bacteria 1902
81 Ga0265760_10000083 3300031090 Bacteria 24473
82 Ga0373935_0013666 3300035692 Bacteria 4901
83 Ga0373937_0381410 3300036401 Bacteria 1337
84 Ga0316582_0019818 3300036647 Bacteria 3944
85 Ga0373925_0270893 3300037068 Bacteria 1366
86 Ga0373925_0273272 3300037068 Bacteria 1360
87 Ga0395900_0434869 3300037418 Bacteria 1271
88 Ga0400489_45402 3300039093 Bacteria 3305
89 Ga0436360_1050306 3300039438 Bacteria 3744
90 Ga0436361_0300524 3300039447 Bacteria 3202
91 Ga0436363_0373807 3300039450 Bacteria 1852
92 Ga0450908_001695 3300042184 Bacteria 4288
93 Ga0453684_0013789 3300044712 Bacteria 13067
94 Ga0451576_0189667 3300045051 Bacteria 2147
95 Ga0451576_0405612 3300045051 Bacteria 1429
96 Ga0495580_0006558 3300046472 Bacteria 9463
97 Ga0495580_0017091 3300046472 Bacteria 5434
98 Ga0495582_0004085 3300046473 Bacteria 8201
99 Ga0495628_0408171 3300046516 Bacteria 991
100 Ga0495640_0288651 3300046533 Bacteria 1021
101 Ga0495586_0035473 3300046535 Bacteria 2680
102 Ga0495587_0122101 3300046536 Bacteria 1492
103 Ga0495674_0526728 3300047319 Bacteria 943
104 Ga0496102_0037900 3300048905 Bacteria 4349
105 Ga0496104_0380638 3300048907 Bacteria 1324
106 Ga0496104_0628192 3300048907 Bacteria 983
107 Ga0496105_0223551 3300048908 Bacteria 1532
108 Ga0496106_0047474 3300048909 Bacteria 3232
109 Ga0496106_0509884 3300048909 Bacteria 966
110 Ga0496112_0127833 3300048915 Bacteria 2512
111 Ga0496114_0072835 3300048917 Bacteria 2890
112 Ga0496115_0443390 3300048918 Bacteria 1049
113 Ga0496126_0087422 3300048929 Bacteria 2746
114 Ga0501033_0031515 3300049570 Bacteria 3984
115 Ga0501036_0373505 3300049572 Bacteria 1190
116 Ga0501037_0111775 3300049573 Bacteria 1968
117 Ga0501039_0432625 3300049575 Bacteria 1033
118 Ga0501071_0164770 3300049587 Bacteria 1658
119 Ga0501072_0247395 3300049588 Bacteria 1420
120 Ga0501080_0121276 3300049742 Bacteria 2423
121 Ga0501035_0056873 3300049822 Bacteria 3488
122 Ga0501044_0003273 3300049823 Bacteria 18232
123 Ga0501044_0025547 3300049823 Bacteria 6261
124 nmdc:mga05p37_89788_c1 3300050507 Bacteria 3787
125 nmdc:mga0qj67_10368_c1 3300050509 Bacteria 6960
126 nmdc:mga06r32_122859_c1 3300050510 Bacteria 2562
127 nmdc:mga08y16_52408_c1 3300050511 Bacteria 4269
128 nmdc:mga0n895_203279_c1 3300050512 Bacteria 2011
129 2511334746 2511231017 Bacteria 6503007
130 8055302660 8055301274 Bacteria 8587385
131 Ga0501034_0000245
132 Ga0065712_10136328
133 Ga0070666_10211257
134 Ga0070668_100028317
135 Ga0070668_100058602
136 Ga0070669_100155703
137 Ga0070671_100016922
138 Ga0070667_100139956
139 Ga0070708_100000395
140 Ga0070663_100082869
141 Ga0070678_100008307
142 Ga0070681_10018229
143 Ga0070706_100001429
144 Ga0070699_100043654
145 Ga0070697_100000445
146 Ga0070672_100272242
147 Ga0070695_100205458
148 Ga0070696_100103820
149 Ga0070693_100000007
150 Ga0070665_100013454
151 Ga0070665_100057652
152 Ga0070704_100002257
153 Ga0070704_100008211
154 Ga0068857_100474557
155 Ga0068859_100108588
156 Ga0068859_100403622
157 Ga0068861_100176688
158 Ga0068858_100164814
159 Ga0068860_100071393
160 Ga0081540_1000023
161 Ga0097621_100026562
162 Ga0075428_100284648
163 Ga0075430_100100070
164 Ga0075431_100006519
165 Ga0075431_100025861
166 Ga0075433_10243602
167 Ga0075434_100387720
168 Ga0097620_100108591
169 Ga0097620_100403573
170 Ga0099795_10022628
171 Ga0111539_10211500
172 Ga0114129_10243510
173 Ga0105248_10223048
174 Ga0105248_10225733
175 Ga0105248_10273898
176 Ga0099796_10017966
177 Ga0105239_10382647
178 Ga0157374_10065132
179 Ga0157378_10001227
180 Ga0163162_10049253
181 Ga0163162_10108768
182 Ga0157372_10467679
183 Ga0157375_10288064
184 Ga0157380_10018305
185 Ga0157377_10149879
186 Ga0157376_10315377
187 Ga0213872_10043328
188 Ga0207680_10086662
189 Ga0207707_10286367
190 Ga0207663_10174764
191 Ga0207649_10359353
192 Ga0207644_10007973
193 Ga0207665_10153048
194 Ga0207691_10293867
195 Ga0207711_10023313
196 Ga0207711_10141783
197 Ga0207711_10271654
198 Ga0207668_10048310
199 Ga0207668_10150301
200 Ga0207640_10139753
201 Ga0207674_10578160
202 Ga0207675_100212138
203 Ga0207683_10017443
204 Ga0207683_10167724
205 Ga0207683_10341254
206 Ga0209969_1023594
207 Ga0207428_10260696
208 Ga0268266_10006743
209 Ga0268266_10127988
210 Ga0268264_10183416
211 Ga0265760_10000083
212 Ga0373935_0013666
213 Ga0373937_0381410
214 Ga0316582_0019818
215 Ga0373925_0270893
216 Ga0373925_0273272
217 Ga0395900_0434869
218 Ga0400489_45402
219 Ga0436360_1050306
220 Ga0436361_0300524
221 Ga0436363_0373807
222 Ga0450908_001695
223 Ga0453684_0013789
224 Ga0451576_0189667
225 Ga0451576_0405612
226 Ga0495580_0006558
227 Ga0495580_0017091
228 Ga0495582_0004085
229 Ga0495628_0408171
230 Ga0495640_0288651
231 Ga0495586_0035473
232 Ga0495587_0122101
233 Ga0495674_0526728
234 Ga0496102_0037900
235 Ga0496104_0380638
236 Ga0496104_0628192
237 Ga0496105_0223551
238 Ga0496106_0047474
239 Ga0496106_0509884
240 Ga0496112_0127833
241 Ga0496114_0072835
242 Ga0496115_0443390
243 Ga0496126_0087422
244 Ga0501033_0031515
245 Ga0501036_0373505
246 Ga0501037_0111775
247 Ga0501039_0432625
248 Ga0501071_0164770
249 Ga0501072_0247395
250 Ga0501080_0121276
251 Ga0501035_0056873
252 Ga0501044_0003273
253 Ga0501044_0025547
254 nmdc:mga05p37_89788_c1
255 nmdc:mga0qj67_10368_c1
256 nmdc:mga06r32_122859_c1
257 nmdc:mga08y16_52408_c1
258 nmdc:mga0n895_203279_c1
259 2511334746
260 8055302660

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03976

PPK2

Polyphosphate kinase 2 (PPK2)

74

302

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
5llf-assembly2.cif.gz_C structure of polyphosphate kinase 2 mutant d117n from francisella tularensis with polyphosphate 0.9429 30 240
3czq-assembly1.cif.gz_D crystal structure of putative polyphosphate kinase 2 from sinorhizobium meliloti 0.9373 30 240
5llb-assembly1.cif.gz_C structure of polyphosphate kinase 2 from francisella tularensis with amppch2ppp and polyphosphate 0.9333 31 244
4yeg-assembly2.cif.gz_D characterisation of polyphosphate kinase 2 from the intracellular pathogen francisella tularensis 0.9253 26 240
5lcd-assembly1.cif.gz_A structure of polyphosphate kinase from meiothermus ruber bound to amp 0.9189 31 237
ID Description Score Start End Superfamily
3czqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8981 30 241 3.40.50.300
3czpB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8832 30 236 3.40.50.300
4yegC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8805 27 244 3.40.50.300
5ldbC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8765 31 249 3.40.50.300
6angA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8649 23 237 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A352S864-F1-model_v4 Polyphosphate kinase 2 0.9853 31 125 GO:0016301
AF-A0A7V8G0E4-F1-model_v4 Polyphosphate:ADP phosphotransferase 0.9843 34 175 GO:0016740
AF-A0A3D5F283-F1-model_v4 Polyphosphate kinase 2 0.9836 31 160 GO:0016301
AF-A0A1I7SY35-F1-model_v4 PPK2 domain-containing protein 0.9827 30 120
AF-A0A7W2IVJ3-F1-model_v4 Polyphosphate kinase 2 0.9807 36 163 GO:0016301

Map