F145786

General Info

Members Datasets Scaffolds Average Seq Length
130 93 129 550

Family's Representative Sequence

Representative Sequence 3300025940|Ga0207691_10014244|Ga0207691_100142448
Length 588
Sequence VGGQAAPLDEIQPSLEDDEGTRVEVAVLHGADGADHVRVHAVVLPDLLAGIGGPSEVERASIGGEGRDLAPVAPGEKPKAEELARDLEKLGPTFVKVGQLLSTRADLLPVAYLEALARLQDDVEPFPFAEVERIVTEELGVRISKAFADFEATPLAAASLGQVHRATLRDGRTVAVKVQRPGIREQIAEDLDAFTEIAQLLDRHAEAGRLYQFEKMVDEFRKTLLRELDYRQEAQNLLTLRENLREFHRIVVPAPIEDFTTSRVLTMEYVFGQKITSLSPLTRMEIDGAVLAEELHKAYLKQILIDGFFHADPHPGNVFLNDDGKLALLDLGMIGRISPVMQENLLKLLLAISEGHGEEAADRAAEIGEKLDTFDEMEFRRHVSELVGVYQNAKIEELQIGRVVMEVSHAAGEAGVRLPPELTMLGKTLLHLDEIARVLDPAFDPNASVRRNAAELLQRRMRKSASPSNLYASLLEAKDFVEKLPGRVNKVLDILANNQLRLDVDAVDERLLIDGLHKIANRIALGLILAALIVGAALLMQVPTTFRILGYPGLAILFFLAAAFGGVALVVSILASDRTPPAKKRRGR

Samples

Sample ID Description Type Environment
1 2643221679 Angustibacter sp. Root456 Isolate Unclassified
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
65 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
70 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
71 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
72 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
75 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
82 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
83 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
87 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
88 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
91 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.23
Metatranscriptomes 0
Isolates 0.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.54
Rhizosphere 93.85
Stem 0
Stem Tuber 0
Unclassified 4.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100007209 3300005330 Bacteria 6362
2 Ga0070690_100025899 3300005330 Unclassified 3614
3 Ga0070670_100183079 3300005331 Bacteria 1819
4 Ga0070680_100000371 3300005336 Bacteria 30200
5 Ga0070687_100040461 3300005343 Bacteria 2349
6 Ga0070692_10006240 3300005345 Bacteria 5161
7 Ga0070714_100000371 3300005435 Bacteria 33450
8 Ga0070713_100069024 3300005436 Bacteria 2979
9 Ga0070701_10013228 3300005438 Bacteria 3748
10 Ga0070701_10034657 3300005438 Bacteria 2530
11 Ga0070705_100025509 3300005440 Bacteria 3205
12 Ga0070708_100000042 3300005445 Bacteria 83511
13 Ga0070707_100000622 3300005468 Bacteria 35487
14 Ga0070707_100014954 3300005468 Bacteria 7283
15 Ga0070698_100046486 3300005471 Bacteria 4438
16 Ga0070699_100024664 3300005518 Bacteria 5184
17 Ga0070697_100032998 3300005536 Bacteria 4168
18 Ga0070686_100000007 3300005544 Bacteria 242709
19 Ga0070695_100019998 3300005545 Bacteria 4083
20 Ga0070696_100063720 3300005546 Bacteria 2582
21 Ga0070696_100067177 3300005546 Bacteria 2516
22 Ga0070704_100004942 3300005549 Bacteria 7738
23 Ga0070704_100008335 3300005549 Bacteria 6209
24 Ga0070664_100114939 3300005564 Bacteria 2352
25 Ga0070702_100004724 3300005615 Bacteria 6255
26 Ga0068859_100000038 3300005617 Bacteria 165071
27 Ga0068859_100103923 3300005617 Bacteria 2899
28 Ga0068860_100055905 3300005843 Bacteria 3752
29 Ga0068862_100000635 3300005844 Bacteria 36366
30 Ga0075428_100152444 3300006844 Bacteria 2511
31 Ga0075430_100032952 3300006846 Bacteria 4397
32 Ga0075430_100055244 3300006846 Bacteria 3339
33 Ga0075430_100084338 3300006846 Bacteria 2661
34 Ga0075431_100000733 3300006847 Bacteria 28284
35 Ga0075431_100008693 3300006847 Bacteria 10176
36 Ga0075431_100023517 3300006847 Bacteria 6305
37 Ga0075431_100033651 3300006847 Bacteria 5281
38 Ga0075434_100006469 3300006871 Bacteria 10737
39 Ga0075434_100019573 3300006871 Bacteria 6553
40 Ga0075434_100065021 3300006871 Bacteria 3632
41 Ga0075434_100074154 3300006871 Bacteria 3396
42 Ga0075429_100004192 3300006880 Bacteria 12346
43 Ga0075429_100009742 3300006880 Bacteria 8327
44 Ga0075429_100040262 3300006880 Bacteria 4068
45 Ga0075436_100053822 3300006914 Bacteria 2779
46 Ga0097620_100000038 3300006931 Bacteria 165071
47 Ga0097620_100103915 3300006931 Bacteria 2899
48 Ga0105240_10027903 3300009093 Bacteria 7385
49 Ga0114129_10002714 3300009147 Bacteria 24652
50 Ga0114129_10012284 3300009147 Bacteria 12184
51 Ga0114129_10016448 3300009147 Bacteria 10528
52 Ga0114129_10044568 3300009147 Bacteria 6240
53 Ga0114129_10066461 3300009147 Bacteria 5030
54 Ga0114129_10122273 3300009147 Bacteria 3582
55 Ga0114129_10343783 3300009147 Unclassified 1978
56 Ga0105249_10002752 3300009553 Bacteria 15201
57 Ga0157378_10111774 3300013297 Unclassified 2505
58 Ga0163162_10134155 3300013306 Bacteria 2586
59 Ga0157375_10022499 3300013308 Bacteria 5801
60 Ga0213876_10001157 3300021384 Bacteria 16666
61 Ga0213876_10015586 3300021384 Bacteria 4022
62 Ga0207684_10026972 3300025910 Bacteria 4898
63 Ga0207660_10003726 3300025917 Bacteria 9934
64 Ga0207662_10010140 3300025918 Bacteria 5194
65 Ga0207646_10000503 3300025922 Bacteria 52283
66 Ga0207650_10150228 3300025925 Bacteria 1838
67 Ga0207700_10005091 3300025928 Bacteria 7814
68 Ga0207664_10000082 3300025929 Bacteria 95257
69 Ga0207691_10014244 3300025940 Bacteria 7586
70 Ga0207711_10100580 3300025941 Bacteria 2557
71 Ga0207689_10008464 3300025942 Bacteria 8960
72 Ga0207689_10101727 3300025942 Bacteria 2360
73 Ga0207679_10100809 3300025945 Bacteria 2258
74 Ga0207708_10058692 3300026075 Bacteria 2936
75 Ga0207675_100013681 3300026118 Bacteria 7572
76 Ga0209999_1003784 3300027543 Bacteria 2714
77 Ga0209970_1000603 3300027614 Bacteria 6237
78 Ga0209983_1002820 3300027665 Bacteria 3757
79 Ga0209971_1000273 3300027682 Bacteria 14582
80 Ga0209974_10000244 3300027876 Bacteria 17535
81 Ga0268265_10000155 3300028380 Bacteria 83925
82 Ga0268264_10046477 3300028381 Bacteria 3605
83 Ga0265337_1024512 3300028556 Unclassified 1844
84 Ga0265338_10010456 3300028800 Bacteria 10875
85 Ga0265338_10025359 3300028800 Bacteria 6020
86 Ga0265327_10004370 3300031251 Bacteria 12559
87 Ga0265314_10014182 3300031711 Bacteria 6392
88 Ga0307416_100174975 3300032002 Bacteria 2004
89 Ga0373929_0000002 3300035085 Bacteria 683932
90 Ga0373943_0022207 3300035170 Bacteria 2938
91 Ga0373937_0004724 3300036401 Bacteria 11586
92 Ga0373937_0116179 3300036401 Bacteria 2492
93 Ga0436365_0393961 3300039437 Bacteria 2218
94 Ga0436365_1009534 3300039437 Bacteria 67843
95 Ga0436365_1361819 3300039437 Bacteria 6240
96 Ga0451576_0039874 3300045051 Bacteria 4971
97 Ga0495592_0116692 3300046454 Bacteria 1883
98 Ga0495662_0014108 3300046476 Bacteria 3888
99 Ga0495628_0099472 3300046516 Bacteria 2246
100 Ga0495647_0034858 3300046681 Bacteria 1887
101 Ga0496102_0002303 3300048905 Bacteria 16318
102 Ga0496114_0004960 3300048917 Bacteria 10377
103 Ga0501296_001943 3300049519 Unclassified 2114
104 Ga0501034_0000148 3300049571 Bacteria 131931
105 Ga0501043_0006071 3300049579 Bacteria 9704
106 Ga0501046_0000007 3300049580 Bacteria 356002
107 Ga0501047_0002019 3300049581 Bacteria 19455
108 Ga0501047_0015053 3300049581 Bacteria 7360
109 Ga0501048_0005197 3300049582 Bacteria 9919
110 Ga0501069_0041095 3300049585 Bacteria 2555
111 Ga0501235_004178 3300049669 Bacteria 3129
112 Ga0501083_0000032 3300049744 Bacteria 102761
113 Ga0501035_0003770 3300049822 Bacteria 14445
114 Ga0501044_0001835 3300049823 Bacteria 24736
115 Ga0501044_0003134 3300049823 Bacteria 18734
116 nmdc:mga05p37_128606_c1 3300050507 Bacteria 3109
117 nmdc:mga05p37_130293_c1 3300050507 Bacteria 3086
118 nmdc:mga05p37_22413_c1 3300050507 Bacteria 7661
119 nmdc:mga05p37_30394_c1 3300050507 Bacteria 6591
120 nmdc:mga05p37_4872_c1 3300050507 Bacteria 15708
121 nmdc:mga09592_2759_c1 3300050508 Bacteria 14206
122 nmdc:mga09592_44025_c1 3300050508 Bacteria 3756
123 nmdc:mga0qj67_41114_c1 3300050509 Bacteria 3635
124 nmdc:mga06r32_4425_c1 3300050510 Bacteria 12569
125 nmdc:mga0n895_8873_c1 3300050512 Bacteria 8753
126 nmdc:mga08x19_25770_c1 3300050514 Bacteria 3666
127 nmdc:mga0a205_3861_c1 3300050515 Bacteria 13426
128 Ga0501082_0124574 3300060353 Bacteria 2235
129 Ga0501082_0193397 3300060353 Bacteria 1769

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046454 Ga0495592_0116692 Ga0495592_0116692_388_1869 467
2 3300005436 Ga0070713_100069024 Ga0070713_1000690244 492
3 3300025928 Ga0207700_10005091 Ga0207700_100050912 492
4 3300005549 Ga0070704_100004942 Ga0070704_1000049423 493
5 3300013297 Ga0157378_10111774 Ga0157378_101117741 493
6 3300036401 Ga0373937_0004724 Ga0373937_0004724_716_2326 495
7 3300005331 Ga0070670_100183079 Ga0070670_1001830791 503
8 3300025925 Ga0207650_10150228 Ga0207650_101502281 503
9 3300049581 Ga0501047_0002019 Ga0501047_0002019_3288_4958 503
10 3300049822 Ga0501035_0003770 Ga0501035_0003770_5216_6886 503
11 3300049823 Ga0501044_0001835 Ga0501044_0001835_21538_23208 503
12 3300035085 Ga0373929_0000002 Ga0373929_0000002_662261_664015 507
13 3300050507 nmdc:mga05p37_128606_c1 nmdc:mga05p37_128606_c1_208_1908 509
14 iso_pu_bacteria 2643221679 2644446525 509
15 3300046516 Ga0495628_0099472 Ga0495628_0099472_45_1655 510
16 3300005546 Ga0070696_100067177 Ga0070696_1000671772 516
17 3300050507 nmdc:mga05p37_30394_c1 nmdc:mga05p37_30394_c1_2403_4022 517
18 3300005615 Ga0070702_100004724 Ga0070702_1000047241 520
19 3300005330 Ga0070690_100025899 Ga0070690_1000258992 521
20 3300005336 Ga0070680_100000371 Ga0070680_10000037125 521
21 3300005438 Ga0070701_10013228 Ga0070701_100132283 521
22 3300005440 Ga0070705_100025509 Ga0070705_1000255092 521
23 3300005549 Ga0070704_100008335 Ga0070704_1000083352 521
24 3300025917 Ga0207660_10003726 Ga0207660_100037266 521
25 3300026075 Ga0207708_10058692 Ga0207708_100586922 521
26 3300031251 Ga0265327_10004370 Ga0265327_100043704 521
27 3300032002 Ga0307416_100174975 Ga0307416_1001749752 521
28 3300049519 Ga0501296_001943 Ga0501296_001943_74_1750 521
29 3300049669 Ga0501235_004178 Ga0501235_004178_1106_2782 521
30 3300005343 Ga0070687_100040461 Ga0070687_1000404611 522
31 3300025918 Ga0207662_10010140 Ga0207662_100101401 522
32 3300045051 Ga0451576_0039874 Ga0451576_0039874_1262_3013 522
33 3300005435 Ga0070714_100000371 Ga0070714_10000037119 524
34 3300005564 Ga0070664_100114939 Ga0070664_1001149392 524
35 3300006847 Ga0075431_100023517 Ga0075431_1000235173 524
36 3300025929 Ga0207664_10000082 Ga0207664_1000008219 524
37 3300025945 Ga0207679_10100809 Ga0207679_101008092 524
38 3300048905 Ga0496102_0002303 Ga0496102_0002303_12253_13956 524
39 3300048917 Ga0496114_0004960 Ga0496114_0004960_3906_5609 524
40 3300005345 Ga0070692_10006240 Ga0070692_100062402 525
41 3300005843 Ga0068860_100055905 Ga0068860_1000559052 525
42 3300009553 Ga0105249_10002752 Ga0105249_100027524 525
43 3300025942 Ga0207689_10008464 Ga0207689_100084643 525
44 3300028381 Ga0268264_10046477 Ga0268264_100464772 525
45 3300005545 Ga0070695_100019998 Ga0070695_1000199984 526
46 3300006846 Ga0075430_100032952 Ga0075430_1000329522 526
47 3300006846 Ga0075430_100055244 Ga0075430_1000552443 526
48 3300006847 Ga0075431_100000733 Ga0075431_10000073326 526
49 3300006847 Ga0075431_100033651 Ga0075431_1000336515 526
50 3300006871 Ga0075434_100074154 Ga0075434_1000741543 526
51 3300006880 Ga0075429_100004192 Ga0075429_1000041924 526
52 3300006880 Ga0075429_100009742 Ga0075429_1000097426 526
53 3300009147 Ga0114129_10066461 Ga0114129_100664614 526
54 3300009147 Ga0114129_10122273 Ga0114129_101222734 526
55 3300025940 Ga0207691_10014244 Ga0207691_100142448 526
56 3300049585 Ga0501069_0041095 Ga0501069_0041095_380_2026 526
57 3300050507 nmdc:mga05p37_22413_c1 nmdc:mga05p37_22413_c1_3304_4950 526
58 3300050508 nmdc:mga09592_2759_c1 nmdc:mga09592_2759_c1_7223_8869 526
59 3300050508 nmdc:mga09592_44025_c1 nmdc:mga09592_44025_c1_1371_3017 526
60 3300050509 nmdc:mga0qj67_41114_c1 nmdc:mga0qj67_41114_c1_1560_3206 526
61 3300050510 nmdc:mga06r32_4425_c1 nmdc:mga06r32_4425_c1_9260_10906 526
62 3300050514 nmdc:mga08x19_25770_c1 nmdc:mga08x19_25770_c1_33_1682 526
63 3300005445 Ga0070708_100000042 Ga0070708_1000000426 527
64 3300005468 Ga0070707_100014954 Ga0070707_1000149543 527
65 3300005471 Ga0070698_100046486 Ga0070698_1000464862 527
66 3300005536 Ga0070697_100032998 Ga0070697_1000329984 527
67 3300005546 Ga0070696_100063720 Ga0070696_1000637202 527
68 3300005844 Ga0068862_100000635 Ga0068862_10000063525 527
69 3300006846 Ga0075430_100084338 Ga0075430_1000843382 527
70 3300006847 Ga0075431_100008693 Ga0075431_1000086938 527
71 3300006871 Ga0075434_100019573 Ga0075434_1000195733 527
72 3300006880 Ga0075429_100040262 Ga0075429_1000402622 527
73 3300009147 Ga0114129_10002714 Ga0114129_1000271413 527
74 3300009147 Ga0114129_10016448 Ga0114129_100164485 527
75 3300009147 Ga0114129_10343783 Ga0114129_103437831 527
76 3300013306 Ga0163162_10134155 Ga0163162_101341552 527
77 3300025941 Ga0207711_10100580 Ga0207711_101005802 527
78 3300026118 Ga0207675_100013681 Ga0207675_1000136818 527
79 3300027543 Ga0209999_1003784 Ga0209999_10037842 527
80 3300027614 Ga0209970_1000603 Ga0209970_10006032 527
81 3300027665 Ga0209983_1002820 Ga0209983_10028202 527
82 3300027682 Ga0209971_1000273 Ga0209971_100027314 527
83 3300027876 Ga0209974_10000244 Ga0209974_100002449 527
84 3300028380 Ga0268265_10000155 Ga0268265_1000015512 527
85 3300049579 Ga0501043_0006071 Ga0501043_0006071_5190_6851 527
86 3300049580 Ga0501046_0000007 Ga0501046_0000007_48851_50512 527
87 3300049581 Ga0501047_0015053 Ga0501047_0015053_1324_2985 527
88 3300049582 Ga0501048_0005197 Ga0501048_0005197_5752_7413 527
89 3300049744 Ga0501083_0000032 Ga0501083_0000032_68619_70280 527
90 3300050507 nmdc:mga05p37_4872_c1 nmdc:mga05p37_4872_c1_3755_5434 527
91 3300050515 nmdc:mga0a205_3861_c1 nmdc:mga0a205_3861_c1_1291_2970 527
92 3300060353 Ga0501082_0124574 Ga0501082_0124574_239_1900 527
93 3300060353 Ga0501082_0193397 Ga0501082_0193397_66_1739 527
94 3300005468 Ga0070707_100000622 Ga0070707_10000062217 528
95 3300005518 Ga0070699_100024664 Ga0070699_1000246641 528
96 3300005617 Ga0068859_100000038 Ga0068859_100000038102 528
97 3300006871 Ga0075434_100006469 Ga0075434_1000064696 528
98 3300006931 Ga0097620_100000038 Ga0097620_100000038102 528
99 3300009093 Ga0105240_10027903 Ga0105240_100279034 528
100 3300021384 Ga0213876_10001157 Ga0213876_100011578 528
101 3300021384 Ga0213876_10015586 Ga0213876_100155864 528
102 3300025910 Ga0207684_10026972 Ga0207684_100269723 528
103 3300025922 Ga0207646_10000503 Ga0207646_1000050332 528
104 3300028556 Ga0265337_1024512 Ga0265337_10245121 528
105 3300028800 Ga0265338_10010456 Ga0265338_100104562 528
106 3300031711 Ga0265314_10014182 Ga0265314_100141822 528
107 3300035170 Ga0373943_0022207 Ga0373943_0022207_377_2059 528
108 3300039437 Ga0436365_1009534 Ga0436365_1009534_8858_10540 528
109 3300039437 Ga0436365_1361819 Ga0436365_1361819_343_2007 528
110 3300046476 Ga0495662_0014108 Ga0495662_0014108_2105_3787 528
111 3300046681 Ga0495647_0034858 Ga0495647_0034858_32_1714 528
112 3300050512 nmdc:mga0n895_8873_c1 nmdc:mga0n895_8873_c1_1271_2950 528
113 3300005330 Ga0070690_100007209 Ga0070690_1000072094 529
114 3300005438 Ga0070701_10034657 Ga0070701_100346572 529
115 3300005544 Ga0070686_100000007 Ga0070686_10000000756 529
116 3300005617 Ga0068859_100103923 Ga0068859_1001039232 529
117 3300006844 Ga0075428_100152444 Ga0075428_1001524442 529
118 3300006871 Ga0075434_100065021 Ga0075434_1000650212 529
119 3300006914 Ga0075436_100053822 Ga0075436_1000538222 529
120 3300006931 Ga0097620_100103915 Ga0097620_1001039152 529
121 3300009147 Ga0114129_10012284 Ga0114129_100122843 529
122 3300009147 Ga0114129_10044568 Ga0114129_100445683 529
123 3300013308 Ga0157375_10022499 Ga0157375_100224992 529
124 3300025942 Ga0207689_10101727 Ga0207689_101017272 529
125 3300028800 Ga0265338_10025359 Ga0265338_100253594 529
126 3300036401 Ga0373937_0116179 Ga0373937_0116179_670_2337 529
127 3300039437 Ga0436365_0393961 Ga0436365_0393961_177_1850 529
128 3300049571 Ga0501034_0000148 Ga0501034_0000148_38022_39731 529
129 3300049823 Ga0501044_0003134 Ga0501044_0003134_11937_13610 529
130 3300050507 nmdc:mga05p37_130293_c1 nmdc:mga05p37_130293_c1_1367_3052 529

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03109

ABC1

ABC1 atypical kinase-like domain

118

363

0.98

PF01636

APH

Phosphotransferase enzyme family

67

379

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5i35-assembly1.cif.gz_A structure of the human mitochondrial kinase coq8a r611k with amppnp (cerebellar ataxia and ubiquinone deficiency through loss of unorthodox kinase activity) 0.7817 57 422
7cz2-assembly1.cif.gz_A the complex structure of msmeg_1954-adp from mycobacterium smegmatis 0.7732 98 415
7cz2-assembly1.cif.gz_A the complex structure of msmeg_1954-adp from mycobacterium smegmatis 0.7577 98 415
7udp-assembly1.cif.gz_A crystal structure of coq8a-ca157 inhibitor complex in space group c2 0.7524 57 422
7udq-assembly1.cif.gz_A crystal structure of coq8a-ca157 inhibitor complex in space group p1 0.7508 57 425
ID Description Score Start End Superfamily
af_A0A0P0Y336_53_247_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.9213 124 307 1.10.510.10
af_K7VEU4_216_424_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.9123 119 310 1.10.510.10
af_Q3MIX3_188_304_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.8958 116 218 3.30.200.20
af_F4ID59_229_367_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.8943 180 309 1.10.510.10
af_Q6K838_373_490_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.8909 114 220 3.30.200.20
ID Description Score Start End GO Terms
AF-A0A4Q2XDI1-F1-model_v4 AarF/ABC1/UbiB kinase family protein 0.966 96 418 GO:0004672
GO:0005524
AF-A0A4Q2XDI1-F1-model_v4 AarF/ABC1/UbiB kinase family protein 0.9321 96 418 GO:0004672
GO:0005524
AF-A0A353FEZ8-F1-model_v4 ABC transporter 0.9102 6 437
AF-A0A287KJF8-F1-model_v4 deleted 0.9069 86 242
AF-A0A382ZPS3-F1-model_v4 ABC1 atypical kinase-like domain-containing protein 0.8992 119 353

Feature Viewer

pLDDT pTM Quality
73.91 0.69 Medium
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Predicted Structure (AlphaFold2)

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