F144848

General Info

Members Datasets Scaffolds Average Seq Length
130 72 260 343

Family's Representative Sequence

Representative Sequence 3300005577|Ga0068857_100281754|Ga0068857_1002817542
Length 353
Sequence MNWMRHQNEMTIGQIAFLGSGETSLAGGRIFETLARKIHDPLRIALLETPAGFELNSAQVVGKVGDFMKTRLQNYKPVVNVIPARKKDSAYSPDDPEIVKPLLYANVIFMGPGSPTYAIRNLKDTLTWNVVRARHRLGATLVFASAATISIGAHALPVYEIYKVGQDIHVVDGLNLFADFGMHISFIPHWNNADGGIDLDTSRCFIGMDRFAEWCNLLPSENETIGLDEHTGLILDFESGQCEVNGVSSVSVVRECDPEIFPSGSTFAITEFGKYHIPDPIGNDIPADVWDMVVNAPPLEEDSPSAQPIALVEKRQQARADKDWARSDRLRDEIAALGWTVQDTKEGQKLVRS

Samples

Sample ID Description Type Environment
1 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
42 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
49 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
53 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
54 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
55 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
56 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
57 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
63 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
64 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
65 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
66 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
67 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
68 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
69 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
70 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
71 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
72 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.23
Stem 0
Stem Tuber 0
Unclassified 16.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068857_100281754 3300005577 Bacteria 1529
2 SwRhRL2b_contig_3094137 2162886007 Bacteria 2392
3 JGI25406J46586_10008840 3300003203 Bacteria 4536
4 Ga0065704_10000294 3300005289 Bacteria 47445
5 Ga0065704_10124700 3300005289 Bacteria 1714
6 Ga0065707_10000503 3300005295 Bacteria 28730
7 Ga0065707_10083395 3300005295 Bacteria 9332
8 Ga0065707_10116020 3300005295 Bacteria 2220
9 Ga0070680_100061950 3300005336 Bacteria 3063
10 Ga0070689_100054317 3300005340 Bacteria 3100
11 Ga0070694_100127982 3300005444 Bacteria 1831
12 Ga0070694_100252542 3300005444 Unclassified 1334
13 Ga0070706_100083222 3300005467 Bacteria 2964
14 Ga0070707_100087161 3300005468 Bacteria 3020
15 Ga0070698_100031500 3300005471 Bacteria 5498
16 Ga0070698_100110863 3300005471 Unclassified 2709
17 Ga0070699_100093139 3300005518 Bacteria 2636
18 Ga0070697_100124389 3300005536 Bacteria 2159
19 Ga0070696_100085569 3300005546 Bacteria 2238
20 Ga0070704_100360534 3300005549 Bacteria 1230
21 Ga0068859_100217394 3300005617 Bacteria 1998
22 Ga0068862_100142339 3300005844 Unclassified 2129
23 Ga0081539_10002974 3300005985 Bacteria 22229
24 Ga0075428_100083374 3300006844 Bacteria 3488
25 Ga0075430_100094545 3300006846 Bacteria 2499
26 Ga0075430_100132761 3300006846 Bacteria 2075
27 Ga0075431_100035741 3300006847 Bacteria 5116
28 Ga0075434_100213609 3300006871 Bacteria 1949
29 Ga0075429_100007125 3300006880 Bacteria 9712
30 Ga0075429_100019605 3300006880 Bacteria 5863
31 Ga0075429_100121126 3300006880 Bacteria 2287
32 Ga0075429_100265036 3300006880 Bacteria 1504
33 Ga0097620_100217397 3300006931 Bacteria 1998
34 Ga0111539_10288739 3300009094 Bacteria 1909
35 Ga0114129_10000808 3300009147 Bacteria 40249
36 Ga0114129_10012378 3300009147 Bacteria 12144
37 Ga0114129_10034912 3300009147 Bacteria 7104
38 Ga0114129_10044588 3300009147 Bacteria 6238
39 Ga0114129_10133406 3300009147 Bacteria 3409
40 Ga0114129_10202374 3300009147 Bacteria 2689
41 Ga0105243_10078651 3300009148 Bacteria 2686
42 Ga0105249_10059608 3300009553 Unclassified 3501
43 Ga0105246_10004946 3300011119 Bacteria 8112
44 Ga0157380_10225791 3300014326 Bacteria 1678
45 Ga0207646_10157930 3300025922 Bacteria 2046
46 Ga0207646_10429688 3300025922 Unclassified 1192
47 Ga0207709_10148424 3300025935 Unclassified 1621
48 Ga0207670_10037231 3300025936 Bacteria 3169
49 Ga0207712_10019919 3300025961 Unclassified 4388
50 Ga0207703_10119360 3300026035 Bacteria 2262
51 Ga0207708_10105722 3300026075 Bacteria 2182
52 Ga0207675_100208883 3300026118 Unclassified 1877
53 Ga0207675_100316931 3300026118 Viruses 1522
54 Ga0207428_10135256 3300027907 Bacteria 1885
55 Ga0268265_10020346 3300028380 Unclassified 4631
56 Ga0268265_10051666 3300028380 Bacteria 3104
57 Ga0268265_10131887 3300028380 Bacteria 2078
58 Ga0265338_10010715 3300028800 Bacteria 10703
59 Ga0265320_10003980 3300031240 Bacteria 9750
60 Ga0265325_10110862 3300031241 Bacteria 1334
61 Ga0265327_10005999 3300031251 Bacteria 9881
62 Ga0265316_10108813 3300031344 Bacteria 2101
63 Ga0307408_100200471 3300031548 Bacteria 1615
64 Ga0316579_10105428 3300031691 Bacteria 1351
65 Ga0316578_10170179 3300031728 Unclassified 1313
66 Ga0316577_10002222 3300031733 Bacteria 9543
67 Ga0307412_10266358 3300031911 Unclassified 1339
68 Ga0307409_100078178 3300031995 Bacteria 2661
69 Ga0307416_100321535 3300032002 Bacteria 1550
70 Ga0316582_0012651 3300036647 Bacteria 4718
71 Ga0316582_0037635 3300036647 Bacteria 3001
72 Ga0316582_0223687 3300036647 Unclassified 1287
73 Ga0316584_0010609 3300036712 Bacteria 6447
74 Ga0316584_0014803 3300036712 Bacteria 5570
75 Ga0316584_0164092 3300036712 Unclassified 1650
76 Ga0316581_0039190 3300037588 Bacteria 1442
77 Ga0400489_86678 3300039093 Bacteria 2619
78 Ga0451577_0008628 3300042876 Bacteria 9901
79 Ga0451577_0171286 3300042876 Unclassified 1956
80 Ga0451577_0298309 3300042876 Bacteria 1460
81 Ga0451577_0308104 3300042876 Unclassified 1435
82 Ga0453683_0004040 3300044673 Bacteria 10573
83 Ga0453683_0027607 3300044673 Bacteria 3598
84 Ga0453683_0052466 3300044673 Unclassified 2553
85 Ga0453684_0000095 3300044712 Bacteria 378681
86 Ga0453684_0000106 3300044712 Bacteria 364365
87 Ga0453684_0000640 3300044712 Bacteria 126342
88 Ga0453684_0006303 3300044712 Bacteria 22669
89 Ga0453684_0014281 3300044712 Bacteria 12735
90 Ga0453684_0015044 3300044712 Bacteria 12278
91 Ga0453684_0025469 3300044712 Bacteria 8589
92 Ga0453684_0031757 3300044712 Bacteria 7408
93 Ga0453684_0040133 3300044712 Bacteria 6365
94 Ga0453684_0046798 3300044712 Bacteria 5747
95 Ga0453684_0055312 3300044712 Bacteria 5160
96 Ga0453684_0058462 3300044712 Unclassified 4980
97 Ga0453684_0059376 3300044712 Bacteria 4931
98 Ga0453684_0094702 3300044712 Bacteria 3673
99 Ga0453684_0160264 3300044712 Bacteria 2662
100 Ga0453684_0175894 3300044712 Unclassified 2517
101 Ga0453684_0259190 3300044712 Bacteria 1993
102 Ga0451576_0000454 3300045051 Bacteria 93047
103 Ga0451576_0007498 3300045051 Bacteria 13018
104 Ga0451576_0015916 3300045051 Bacteria 8315
105 Ga0451576_0029612 3300045051 Bacteria 5858
106 Ga0451576_0080404 3300045051 Unclassified 3391
107 Ga0451576_0133171 3300045051 Bacteria 2591
108 Ga0451576_0295236 3300045051 Bacteria 1694
109 Ga0501042_0207849 3300049578 Bacteria 1412
110 Ga0501046_0105133 3300049580 Bacteria 2163
111 Ga0501075_0043276 3300049591 Bacteria 3377
112 Ga0501076_0091708 3300049592 Bacteria 2444
113 Ga0501076_0098237 3300049592 Bacteria 2359
114 Ga0501079_0186974 3300049741 Bacteria 1617
115 nmdc:mga05p37_27298_c1 3300050507 Bacteria 6951
116 nmdc:mga05p37_46092_c1 3300050507 Bacteria 5361
117 nmdc:mga05p37_661_c1 3300050507 Bacteria 38042
118 nmdc:mga09592_106483_c1 3300050508 Unclassified 2405
119 nmdc:mga09592_156570_c1 3300050508 Bacteria 1967
120 nmdc:mga09592_247732_c1 3300050508 Bacteria 1544
121 nmdc:mga09592_357622_c1 3300050508 Bacteria 1264
122 nmdc:mga09592_8530_c1 3300050508 Bacteria 8336
123 nmdc:mga06r32_607059_c1 3300050510 Bacteria 1065
124 nmdc:mga08y16_239913_c1 3300050511 Bacteria 1874
125 nmdc:mga0n895_115918_c1 3300050512 Unclassified 2697
126 Ga0501084_0021062 3300054114 Bacteria 5438
127 Ga0501084_0191239 3300054114 Bacteria 1727
128 Ga0501082_0211934 3300060353 Bacteria 1685
129 Ga0501082_0232021 3300060353 Bacteria 1606
130 Ga0530510_0052737 3300061734 Bacteria 2938
131 Ga0068857_100281754
132 SwRhRL2b_contig_3094137
133 JGI25406J46586_10008840
134 Ga0065704_10000294
135 Ga0065704_10124700
136 Ga0065707_10000503
137 Ga0065707_10083395
138 Ga0065707_10116020
139 Ga0070680_100061950
140 Ga0070689_100054317
141 Ga0070694_100127982
142 Ga0070694_100252542
143 Ga0070706_100083222
144 Ga0070707_100087161
145 Ga0070698_100031500
146 Ga0070698_100110863
147 Ga0070699_100093139
148 Ga0070697_100124389
149 Ga0070696_100085569
150 Ga0070704_100360534
151 Ga0068859_100217394
152 Ga0068862_100142339
153 Ga0081539_10002974
154 Ga0075428_100083374
155 Ga0075430_100094545
156 Ga0075430_100132761
157 Ga0075431_100035741
158 Ga0075434_100213609
159 Ga0075429_100007125
160 Ga0075429_100019605
161 Ga0075429_100121126
162 Ga0075429_100265036
163 Ga0097620_100217397
164 Ga0111539_10288739
165 Ga0114129_10000808
166 Ga0114129_10012378
167 Ga0114129_10034912
168 Ga0114129_10044588
169 Ga0114129_10133406
170 Ga0114129_10202374
171 Ga0105243_10078651
172 Ga0105249_10059608
173 Ga0105246_10004946
174 Ga0157380_10225791
175 Ga0207646_10157930
176 Ga0207646_10429688
177 Ga0207709_10148424
178 Ga0207670_10037231
179 Ga0207712_10019919
180 Ga0207703_10119360
181 Ga0207708_10105722
182 Ga0207675_100208883
183 Ga0207675_100316931
184 Ga0207428_10135256
185 Ga0268265_10020346
186 Ga0268265_10051666
187 Ga0268265_10131887
188 Ga0265338_10010715
189 Ga0265320_10003980
190 Ga0265325_10110862
191 Ga0265327_10005999
192 Ga0265316_10108813
193 Ga0307408_100200471
194 Ga0316579_10105428
195 Ga0316578_10170179
196 Ga0316577_10002222
197 Ga0307412_10266358
198 Ga0307409_100078178
199 Ga0307416_100321535
200 Ga0316582_0012651
201 Ga0316582_0037635
202 Ga0316582_0223687
203 Ga0316584_0010609
204 Ga0316584_0014803
205 Ga0316584_0164092
206 Ga0316581_0039190
207 Ga0400489_86678
208 Ga0451577_0008628
209 Ga0451577_0171286
210 Ga0451577_0298309
211 Ga0451577_0308104
212 Ga0453683_0004040
213 Ga0453683_0027607
214 Ga0453683_0052466
215 Ga0453684_0000095
216 Ga0453684_0000106
217 Ga0453684_0000640
218 Ga0453684_0006303
219 Ga0453684_0014281
220 Ga0453684_0015044
221 Ga0453684_0025469
222 Ga0453684_0031757
223 Ga0453684_0040133
224 Ga0453684_0046798
225 Ga0453684_0055312
226 Ga0453684_0058462
227 Ga0453684_0059376
228 Ga0453684_0094702
229 Ga0453684_0160264
230 Ga0453684_0175894
231 Ga0453684_0259190
232 Ga0451576_0000454
233 Ga0451576_0007498
234 Ga0451576_0015916
235 Ga0451576_0029612
236 Ga0451576_0080404
237 Ga0451576_0133171
238 Ga0451576_0295236
239 Ga0501042_0207849
240 Ga0501046_0105133
241 Ga0501075_0043276
242 Ga0501076_0091708
243 Ga0501076_0098237
244 Ga0501079_0186974
245 nmdc:mga05p37_27298_c1
246 nmdc:mga05p37_46092_c1
247 nmdc:mga05p37_661_c1
248 nmdc:mga09592_106483_c1
249 nmdc:mga09592_156570_c1
250 nmdc:mga09592_247732_c1
251 nmdc:mga09592_357622_c1
252 nmdc:mga09592_8530_c1
253 nmdc:mga06r32_607059_c1
254 nmdc:mga08y16_239913_c1
255 nmdc:mga0n895_115918_c1
256 Ga0501084_0021062
257 Ga0501084_0191239
258 Ga0501082_0211934
259 Ga0501082_0232021
260 Ga0530510_0052737

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23493

305

350

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u0b-assembly1.cif.gz_B crystal structure of cysteinyl-trna synthetase binary complex with trnacys 0.9163 299 345
3sp1-assembly1.cif.gz_A crystal structure of cysteinyl-trna synthetase (cyss) from borrelia burgdorferi 0.8793 296 334
3sp1-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase (cyss) from borrelia burgdorferi 0.8577 296 345
6nqc-assembly1.cif.gz_A crystal structure of a peptidase from an aci-b1 actinobacterium 0.8378 2 259
6nqc-assembly1.cif.gz_A crystal structure of a peptidase from an aci-b1 actinobacterium 0.8124 2 259
ID Description Score Start End Superfamily
af_K7KP47_3_126_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.965 296 326 1.25.40.10
3k5oB06 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;B family DNA polymerase, finger domain 0.9625 298 329 1.10.287.690
af_Q965Q2_1_116_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9575 296 326 1.25.40.10
af_Q7JVW5_48_356_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9121 293 329 1.25.40.10
af_P33339_118_226_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9106 293 326 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A497SM45-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS) 0.9983 295 344 GO:0004817
GO:0005524
GO:0005829
GO:0006423
GO:0008270
AF-A0A1G2CUX4-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS) 0.9953 295 345 GO:0004817
GO:0005524
GO:0005829
GO:0006423
GO:0008270
AF-A0A661KN62-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS) 0.9918 296 345 GO:0004124
GO:0004817
GO:0005524
GO:0005737
GO:0006423
GO:0006535
GO:0046872
AF-A0A7L4RT70-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) 0.99 295 345 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A3M1FPD5-F1-model_v4 Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS) 0.9843 296 344 GO:0004817
GO:0005524
GO:0005737
GO:0006423
GO:0046872

Map