F142965
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 129 | 67 | 258 | 231 |
Family's Representative Sequence
| Representative Sequence | 3300046517|Ga0495630_0180394|Ga0495630_0180394_787_1524 |
| Length | 245 |
| Sequence | MSTLTEGDADAGMPLLRVRGLTKVYHLGEDFWALRGVDIDINEGELVSIVGQSGSGKSTLLNILGCLDRPTGGDYWLAGHHINKMSSNELAAVRNQFLGFVFQSFHLLPRLTALENVMLPLGYDHLQKHPDMREAAIASLRRVGLGDKLNNKPTQMSGGQQQRVAVARALVNKPSLLMADEPTGNLDSNTAHDILALFKDLHRQGTTVLIISHDPDIAASTDRKIEIKDGRIIGDTKIEHAGAAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 3 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 4 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 5 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 6 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 7 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 8 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 9 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 10 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 11 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 12 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 13 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 14 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 15 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 16 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 17 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 18 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 19 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 20 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 21 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 22 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 23 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 24 | 3300033524 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 25 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 26 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 27 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 28 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 29 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 30 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 31 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 32 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 33 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 34 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 35 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 36 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 37 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 38 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 39 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 40 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 41 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 42 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 43 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 44 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 45 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 46 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 47 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 48 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 49 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 50 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 51 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 52 | 2540341094 | Bacillus subtilis XF-1 | Isolate | Rhizosphere |
| 53 | 2808606387 | Rhizobium sp. SJZ105 | Isolate | Rhizosphere |
| 54 | 2808606399 | Bacillus sp. SJZ110 | Isolate | Rhizosphere |
| 55 | 2860837431 | Bacillus sp. WR11 | Isolate | Unclassified |
| 56 | 2874612657 | Bradyrhizobium forestalis INPA54B | Isolate | Nodule |
| 57 | 2874628541 | Bradyrhizobium betae Opo-243 | Isolate | Unclassified |
| 58 | 2897803580 | Azospirillum doebereinerae GSF71 | Isolate | Unclassified |
| 59 | 2919171160 | Neorhizobium sp. 2083 | Isolate | Unclassified |
| 60 | 2962290636 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 61 | 2969136845 | Bacillus subtilis TLO3 | Isolate | Rhizosphere |
| 62 | 2969765954 | Bacillus intestinalis GM2 | Isolate | Rhizosphere |
| 63 | 2969770375 | Bacillus subtilis GM5 | Isolate | Rhizosphere |
| 64 | 2980492589 | Bacillus subtilis GQJK2 | Isolate | Rhizosphere |
| 65 | 3006879489 | Bacillus atrophaeus UCMB-5137 | Isolate | Rhizosphere |
| 66 | 8005376324 | Rhizobium changzhiense WYCCWR 11279 | Isolate | Nodule |
| 67 | 8022653035 | Bacillus sp. Rc4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.82 |
| Metatranscriptomes | 0.78 |
| Isolates | 12.4 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.78 |
| Nodule | 1.55 |
| Rhizoplane | 0 |
| Rhizosphere | 75.19 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495630_0180394 | 3300046517 | Bacteria | 1610 |
| 2 | Ga0068855_100121691 | 3300005563 | Bacteria | 2986 |
| 3 | Ga0068857_100032905 | 3300005577 | Bacteria | 4584 |
| 4 | Ga0105241_10060220 | 3300009174 | Bacteria | 2920 |
| 5 | Ga0105239_10023361 | 3300010375 | Bacteria | 6809 |
| 6 | Ga0157370_10182099 | 3300013104 | Bacteria | 1952 |
| 7 | Ga0213876_10206832 | 3300021384 | Bacteria | 1043 |
| 8 | Ga0207667_10365432 | 3300025949 | Bacteria | 1471 |
| 9 | Ga0207674_10011826 | 3300026116 | Bacteria | 9786 |
| 10 | Ga0265326_10009644 | 3300028558 | Bacteria | 2888 |
| 11 | Ga0265318_10020891 | 3300028577 | Bacteria | 2635 |
| 12 | Ga0265323_10002336 | 3300028653 | Bacteria | 8767 |
| 13 | Ga0265336_10000773 | 3300028666 | Bacteria | 16946 |
| 14 | Ga0265338_10000090 | 3300028800 | Bacteria | 171540 |
| 15 | Ga0265327_10019219 | 3300031251 | Bacteria | 4208 |
| 16 | Ga0316575_10029283 | 3300031665 | Bacteria | 2150 |
| 17 | Ga0316575_10029528 | 3300031665 | Bacteria | 2141 |
| 18 | Ga0316575_10068673 | 3300031665 | Bacteria | 1422 |
| 19 | Ga0316575_10073637 | 3300031665 | Bacteria | 1374 |
| 20 | Ga0316579_10025813 | 3300031691 | Bacteria | 2655 |
| 21 | Ga0316576_10003471 | 3300031727 | Bacteria | 9246 |
| 22 | Ga0316576_10006072 | 3300031727 | Bacteria | 7472 |
| 23 | Ga0316576_10008695 | 3300031727 | Bacteria | 6499 |
| 24 | Ga0316576_10016425 | 3300031727 | Bacteria | 4999 |
| 25 | Ga0316576_10028167 | 3300031727 | Bacteria | 3957 |
| 26 | Ga0316576_10028802 | 3300031727 | Bacteria | 3919 |
| 27 | Ga0316576_10038387 | 3300031727 | Bacteria | 3433 |
| 28 | Ga0316576_10070322 | 3300031727 | Bacteria | 2581 |
| 29 | Ga0316576_10146781 | 3300031727 | Bacteria | 1777 |
| 30 | Ga0316576_10185043 | 3300031727 | Bacteria | 1571 |
| 31 | Ga0316576_10220886 | 3300031727 | Bacteria | 1425 |
| 32 | Ga0316576_10232187 | 3300031727 | Bacteria | 1387 |
| 33 | Ga0316578_10000433 | 3300031728 | Bacteria | 13818 |
| 34 | Ga0316578_10057126 | 3300031728 | Bacteria | 2292 |
| 35 | Ga0316578_10070386 | 3300031728 | Bacteria | 2070 |
| 36 | Ga0316578_10138176 | 3300031728 | Bacteria | 1467 |
| 37 | Ga0316578_10159194 | 3300031728 | Bacteria | 1361 |
| 38 | Ga0316578_10260748 | 3300031728 | Bacteria | 1039 |
| 39 | Ga0316577_10002067 | 3300031733 | Bacteria | 9806 |
| 40 | Ga0316577_10028767 | 3300031733 | Bacteria | 3101 |
| 41 | Ga0316577_10063333 | 3300031733 | Bacteria | 2065 |
| 42 | Ga0316577_10077976 | 3300031733 | Bacteria | 1850 |
| 43 | Ga0316577_10080119 | 3300031733 | Bacteria | 1825 |
| 44 | Ga0316577_10203988 | 3300031733 | Bacteria | 1117 |
| 45 | Ga0316583_10001020 | 3300032133 | Bacteria | 9045 |
| 46 | Ga0316583_10001391 | 3300032133 | Bacteria | 8042 |
| 47 | Ga0316583_10018713 | 3300032133 | Bacteria | 2487 |
| 48 | Ga0316583_10054402 | 3300032133 | Bacteria | 1407 |
| 49 | Ga0316583_10070265 | 3300032133 | Bacteria | 1225 |
| 50 | Ga0316583_10149071 | 3300032133 | Bacteria | 814 |
| 51 | Ga0316585_10002377 | 3300032137 | Bacteria | 5070 |
| 52 | Ga0316585_10034359 | 3300032137 | Bacteria | 1602 |
| 53 | Ga0316580_10001176 | 3300032139 | Bacteria | 6652 |
| 54 | Ga0316580_10023630 | 3300032139 | Bacteria | 1899 |
| 55 | Ga0316580_10036923 | 3300032139 | Bacteria | 1511 |
| 56 | Ga0316592_1070407 | 3300033524 | Bacteria | 790 |
| 57 | Ga0316574_0048993 | 3300035398 | Bacteria | 2625 |
| 58 | Ga0316574_0069042 | 3300035398 | Bacteria | 2229 |
| 59 | Ga0316574_0102537 | 3300035398 | Bacteria | 1832 |
| 60 | Ga0316574_0117569 | 3300035398 | Bacteria | 1706 |
| 61 | Ga0316574_0118592 | 3300035398 | Bacteria | 1698 |
| 62 | Ga0373937_0040372 | 3300036401 | Bacteria | 4254 |
| 63 | Ga0316582_0027229 | 3300036647 | Bacteria | 3450 |
| 64 | Ga0316582_0034827 | 3300036647 | Bacteria | 3103 |
| 65 | Ga0316582_0051827 | 3300036647 | Bacteria | 2606 |
| 66 | Ga0316582_0118807 | 3300036647 | Bacteria | 1767 |
| 67 | Ga0316582_0123935 | 3300036647 | Bacteria | 1731 |
| 68 | Ga0316582_0549644 | 3300036647 | Bacteria | 795 |
| 69 | Ga0316584_0012825 | 3300036712 | Bacteria | 5917 |
| 70 | Ga0316584_0015646 | 3300036712 | Bacteria | 5427 |
| 71 | Ga0316584_0019191 | 3300036712 | Bacteria | 4940 |
| 72 | Ga0316584_0065985 | 3300036712 | Bacteria | 2712 |
| 73 | Ga0316584_0097866 | 3300036712 | Bacteria | 2197 |
| 74 | Ga0316584_0159743 | 3300036712 | Bacteria | 1675 |
| 75 | Ga0316584_0204539 | 3300036712 | Bacteria | 1455 |
| 76 | Ga0316584_0315379 | 3300036712 | Bacteria | 1129 |
| 77 | Ga0316584_0347643 | 3300036712 | Bacteria | 1065 |
| 78 | Ga0316581_0044920 | 3300037588 | Bacteria | 1350 |
| 79 | Ga0436364_0513355 | 3300037853 | Bacteria | 10321 |
| 80 | Ga0400484_18523 | 3300038725 | Bacteria | 4705 |
| 81 | Ga0400490_20164 | 3300038726 | Bacteria | 20003 |
| 82 | Ga0400490_27087 | 3300038726 | Bacteria | 2615 |
| 83 | Ga0400491_05104 | 3300038727 | Bacteria | 11249 |
| 84 | Ga0400491_17452 | 3300038727 | Bacteria | 1709 |
| 85 | Ga0400485_20505 | 3300038735 | Bacteria | 6730 |
| 86 | Ga0400488_16850 | 3300038741 | Bacteria | 1229 |
| 87 | Ga0400488_24293 | 3300038741 | Bacteria | 4232 |
| 88 | Ga0400486_06443 | 3300038742 | Bacteria | 19261 |
| 89 | Ga0400486_11945 | 3300038742 | Bacteria | 10293 |
| 90 | Ga0400486_19257 | 3300038742 | Bacteria | 29301 |
| 91 | Ga0400483_125496 | 3300039062 | Bacteria | 3668 |
| 92 | Ga0400483_172005 | 3300039062 | Bacteria | 6820 |
| 93 | Ga0400489_46018 | 3300039093 | Bacteria | 42470 |
| 94 | Ga0400489_56483 | 3300039093 | Bacteria | 1214 |
| 95 | Ga0400487_31736 | 3300039110 | Bacteria | 3637 |
| 96 | Ga0400487_66339 | 3300039110 | Bacteria | 1759 |
| 97 | Ga0436365_0784546 | 3300039437 | Bacteria | 1445 |
| 98 | Ga0451577_0147841 | 3300042876 | Bacteria | 2113 |
| 99 | Ga0453683_0068137 | 3300044673 | Bacteria | 2225 |
| 100 | Ga0453684_0000860 | 3300044712 | Bacteria | 102244 |
| 101 | Ga0453684_0004186 | 3300044712 | Bacteria | 31067 |
| 102 | Ga0453684_0236603 | 3300044712 | Bacteria | 2105 |
| 103 | Ga0453684_0483935 | 3300044712 | Bacteria | 1373 |
| 104 | Ga0451576_0094708 | 3300045051 | Bacteria | 3106 |
| 105 | Ga0451576_0194198 | 3300045051 | Bacteria | 2120 |
| 106 | Ga0451576_0580121 | 3300045051 | Bacteria | 1178 |
| 107 | Ga0495581_0209440 | 3300047315 | Bacteria | 1140 |
| 108 | Ga0495680_0458034 | 3300047322 | Bacteria | 872 |
| 109 | Ga0496121_0013426 | 3300048924 | Bacteria | 8802 |
| 110 | Ga0496122_0039427 | 3300048925 | Bacteria | 3767 |
| 111 | Ga0496125_0000477 | 3300048928 | Bacteria | 70913 |
| 112 | Ga0496126_0073471 | 3300048929 | Bacteria | 3040 |
| 113 | nmdc:mga0sz30_21656_c1 | 3300050516 | Bacteria | 1531 |
| 114 | 2540608243 | 2540341094 | Bacteria | 4061186 |
| 115 | 2808990442 | 2808606387 | Bacteria | 5697198 |
| 116 | 2809053370 | 2808606399 | Bacteria | 4021018 |
| 117 | 2860841034 | 2860837431 | Bacteria | 4202080 |
| 118 | 2874620058 | 2874612657 | Bacteria | 8252029 |
| 119 | 2874634366 | 2874628541 | Bacteria | 8630250 |
| 120 | 2897809296 | 2897803580 | Bacteria | 7000062 |
| 121 | 2919175148 | 2919171160 | Bacteria | 6499771 |
| 122 | 2962294269 | 2962290636 | Bacteria | 4072939 |
| 123 | 2969140243 | 2969136845 | Bacteria | 3923176 |
| 124 | 2969768983 | 2969765954 | Bacteria | 4216713 |
| 125 | 2969771311 | 2969770375 | Bacteria | 4271280 |
| 126 | 2980496029 | 2980492589 | Bacteria | 4072961 |
| 127 | 3006882768 | 3006879489 | Bacteria | 4064221 |
| 128 | 8005380115 | 8005376324 | Bacteria | 6590079 |
| 129 | 8022657057 | 8022653035 | Bacteria | 4035078 |
| 130 | Ga0495630_0180394 | |||
| 131 | Ga0068855_100121691 | |||
| 132 | Ga0068857_100032905 | |||
| 133 | Ga0105241_10060220 | |||
| 134 | Ga0105239_10023361 | |||
| 135 | Ga0157370_10182099 | |||
| 136 | Ga0213876_10206832 | |||
| 137 | Ga0207667_10365432 | |||
| 138 | Ga0207674_10011826 | |||
| 139 | Ga0265326_10009644 | |||
| 140 | Ga0265318_10020891 | |||
| 141 | Ga0265323_10002336 | |||
| 142 | Ga0265336_10000773 | |||
| 143 | Ga0265338_10000090 | |||
| 144 | Ga0265327_10019219 | |||
| 145 | Ga0316575_10029283 | |||
| 146 | Ga0316575_10029528 | |||
| 147 | Ga0316575_10068673 | |||
| 148 | Ga0316575_10073637 | |||
| 149 | Ga0316579_10025813 | |||
| 150 | Ga0316576_10003471 | |||
| 151 | Ga0316576_10006072 | |||
| 152 | Ga0316576_10008695 | |||
| 153 | Ga0316576_10016425 | |||
| 154 | Ga0316576_10028167 | |||
| 155 | Ga0316576_10028802 | |||
| 156 | Ga0316576_10038387 | |||
| 157 | Ga0316576_10070322 | |||
| 158 | Ga0316576_10146781 | |||
| 159 | Ga0316576_10185043 | |||
| 160 | Ga0316576_10220886 | |||
| 161 | Ga0316576_10232187 | |||
| 162 | Ga0316578_10000433 | |||
| 163 | Ga0316578_10057126 | |||
| 164 | Ga0316578_10070386 | |||
| 165 | Ga0316578_10138176 | |||
| 166 | Ga0316578_10159194 | |||
| 167 | Ga0316578_10260748 | |||
| 168 | Ga0316577_10002067 | |||
| 169 | Ga0316577_10028767 | |||
| 170 | Ga0316577_10063333 | |||
| 171 | Ga0316577_10077976 | |||
| 172 | Ga0316577_10080119 | |||
| 173 | Ga0316577_10203988 | |||
| 174 | Ga0316583_10001020 | |||
| 175 | Ga0316583_10001391 | |||
| 176 | Ga0316583_10018713 | |||
| 177 | Ga0316583_10054402 | |||
| 178 | Ga0316583_10070265 | |||
| 179 | Ga0316583_10149071 | |||
| 180 | Ga0316585_10002377 | |||
| 181 | Ga0316585_10034359 | |||
| 182 | Ga0316580_10001176 | |||
| 183 | Ga0316580_10023630 | |||
| 184 | Ga0316580_10036923 | |||
| 185 | Ga0316592_1070407 | |||
| 186 | Ga0316574_0048993 | |||
| 187 | Ga0316574_0069042 | |||
| 188 | Ga0316574_0102537 | |||
| 189 | Ga0316574_0117569 | |||
| 190 | Ga0316574_0118592 | |||
| 191 | Ga0373937_0040372 | |||
| 192 | Ga0316582_0027229 | |||
| 193 | Ga0316582_0034827 | |||
| 194 | Ga0316582_0051827 | |||
| 195 | Ga0316582_0118807 | |||
| 196 | Ga0316582_0123935 | |||
| 197 | Ga0316582_0549644 | |||
| 198 | Ga0316584_0012825 | |||
| 199 | Ga0316584_0015646 | |||
| 200 | Ga0316584_0019191 | |||
| 201 | Ga0316584_0065985 | |||
| 202 | Ga0316584_0097866 | |||
| 203 | Ga0316584_0159743 | |||
| 204 | Ga0316584_0204539 | |||
| 205 | Ga0316584_0315379 | |||
| 206 | Ga0316584_0347643 | |||
| 207 | Ga0316581_0044920 | |||
| 208 | Ga0436364_0513355 | |||
| 209 | Ga0400484_18523 | |||
| 210 | Ga0400490_20164 | |||
| 211 | Ga0400490_27087 | |||
| 212 | Ga0400491_05104 | |||
| 213 | Ga0400491_17452 | |||
| 214 | Ga0400485_20505 | |||
| 215 | Ga0400488_16850 | |||
| 216 | Ga0400488_24293 | |||
| 217 | Ga0400486_06443 | |||
| 218 | Ga0400486_11945 | |||
| 219 | Ga0400486_19257 | |||
| 220 | Ga0400483_125496 | |||
| 221 | Ga0400483_172005 | |||
| 222 | Ga0400489_46018 | |||
| 223 | Ga0400489_56483 | |||
| 224 | Ga0400487_31736 | |||
| 225 | Ga0400487_66339 | |||
| 226 | Ga0436365_0784546 | |||
| 227 | Ga0451577_0147841 | |||
| 228 | Ga0453683_0068137 | |||
| 229 | Ga0453684_0000860 | |||
| 230 | Ga0453684_0004186 | |||
| 231 | Ga0453684_0236603 | |||
| 232 | Ga0453684_0483935 | |||
| 233 | Ga0451576_0094708 | |||
| 234 | Ga0451576_0194198 | |||
| 235 | Ga0451576_0580121 | |||
| 236 | Ga0495581_0209440 | |||
| 237 | Ga0495680_0458034 | |||
| 238 | Ga0496121_0013426 | |||
| 239 | Ga0496122_0039427 | |||
| 240 | Ga0496125_0000477 | |||
| 241 | Ga0496126_0073471 | |||
| 242 | nmdc:mga0sz30_21656_c1 | |||
| 243 | 2540608243 | |||
| 244 | 2808990442 | |||
| 245 | 2809053370 | |||
| 246 | 2860841034 | |||
| 247 | 2874620058 | |||
| 248 | 2874634366 | |||
| 249 | 2897809296 | |||
| 250 | 2919175148 | |||
| 251 | 2962294269 | |||
| 252 | 2969140243 | |||
| 253 | 2969768983 | |||
| 254 | 2969771311 | |||
| 255 | 2980496029 | |||
| 256 | 3006882768 | |||
| 257 | 8005380115 | |||
| 258 | 8022657057 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1f3o-assembly1.cif.gz_A-2 | crystal structure of mj0796 atp-binding cassette | 0.9779 | 6 | 222 |
| 5xu1-assembly1.cif.gz_B | structure of a non-canonical abc transporter from streptococcus pneumoniae r6 | 0.9715 | 3 | 222 |
| 5ws4-assembly1.cif.gz_B | crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii | 0.9678 | 3 | 222 |
| 5lj9-assembly3.cif.gz_C | structure of the e. coli macb abc domain (c2221) | 0.966 | 4 | 222 |
| 5xu1-assembly1.cif.gz_A | structure of a non-canonical abc transporter from streptococcus pneumoniae r6 | 0.9648 | 3 | 222 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A4I4M8_123_401_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9717 | 32 | 222 | 3.40.50.300 |
| af_Q4DP20_46_317_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9702 | 3 | 222 | 3.40.50.300 |
| af_Q8T665_1_248_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.965 | 1 | 222 | 3.40.50.300 |
| 5xu1A00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9648 | 3 | 222 | 3.40.50.300 |
| af_Q8T664_36_360_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9639 | 3 | 222 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2N2M1U9-F1-model_v4 | Macrolide ABC transporter ATP-binding protein | 0.9849 | 4 | 222 |
GO:0005524
GO:0016887 |
| AF-A0A7V9TM51-F1-model_v4 | ABC transporter ATP-binding protein | 0.984 | 24 | 222 |
GO:0005524
GO:0005886 GO:0016887 GO:0022857 |
| AF-A0A538RLX8-F1-model_v4 | ABC transporter ATP-binding protein | 0.9814 | 6 | 222 |
GO:0005524
GO:0005886 GO:0016887 GO:0022857 |
| AF-A0A1V4IVY5-F1-model_v4 | Bacitracin export ATP-binding protein BceA | 0.9797 | 4 | 222 |
GO:0005524
GO:0016887 |
| AF-A0A089I4Y8-F1-model_v4 | ABC transporter ATP-binding protein | 0.9787 | 6 | 222 |
GO:0005524
GO:0005886 GO:0016887 GO:0022857 |