F142461
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 129 | 55 | 258 | 457 |
Family's Representative Sequence
| Representative Sequence | 3300032168|Ga0316593_10000605|Ga0316593_100006052 |
| Length | 499 |
| Sequence | VSAERTSIHGQWSGRLAFILAASGSAIGLGNIWKFPYIAGKYGGGAFVLVYLICIAVIGIPIMMAEVMLGRRGRQSPSNTMRTLAAEEYVSPHWQWLGWGGVIAGFLILSYYSVVAGEALAYVFRTGAGLFDGATADGVRTIFARFVSDPEHLLAWHTIFMGMTMIVVARGVRSGLEKAVRFMMPALLMILLVLVGYAMNTSQFGNALAFMFKPDFHHLFYAQDASGNLLLNAQGQRIFTWNGVLVALGHAFFTLSLGMGAIMVYGSYLRKDASIAKTTLVIAVMDTVVALLAGMAIFPLVFANNLPPGTGSGLIFETLPIAFGHMPGGAFFGCLFFILLVFAAWTSAISLMEPAVTWLVENRGHTRVHAVVVVGLLIWLLGIASVFSAAGVTLRDIVTSVAAAVGIHDLELPQRFFSLSAFGLIDYLTANIMLPLGGLLTALFAGWAMREQASREELGIRLPGGYAAWRIMIRYVTPVAVILVFLNVVGAFDWVRRWF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 2 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 3 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 4 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 5 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 6 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 7 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 8 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 9 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 10 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 11 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 12 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 13 | 3300033529 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 14 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 15 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 16 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 17 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 18 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 19 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 20 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 21 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 22 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 23 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 24 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 25 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 26 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 27 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 28 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 29 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 30 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 31 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 32 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 33 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 34 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 35 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 36 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 37 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 38 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 39 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 40 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 41 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 42 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 43 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 44 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 45 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 46 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 47 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 48 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 49 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 50 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 51 | 2894510363 | Methylomonas sp. Kb3 | Isolate | Unclassified |
| 52 | 2989392574 | Methylomonas rhizoryzae GJ1 | Isolate | Unclassified |
| 53 | 8002745576 | Marinomonas spartinae USM8 | Isolate | Rhizosphere |
| 54 | 8054357960 | Idiomarina rhizosphaerae M1R2S28 | Isolate | Rhizosphere |
| 55 | 8057160832 | Larsenimonas rhizosphaerae GH2-1 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.7 |
| Metatranscriptomes | 5.43 |
| Isolates | 3.88 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 69.77 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.78 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0316593_10000605 | 3300032168 | Bacteria | 6801 |
| 2 | Ga0265331_10008400 | 3300031250 | Bacteria | 5876 |
| 3 | Ga0265327_10008520 | 3300031251 | Bacteria | 7619 |
| 4 | Ga0265327_10018029 | 3300031251 | Bacteria | 4392 |
| 5 | Ga0265316_10000186 | 3300031344 | Bacteria | 71372 |
| 6 | Ga0316575_10019013 | 3300031665 | Bacteria | 2623 |
| 7 | Ga0316579_10008259 | 3300031691 | Bacteria | 4335 |
| 8 | Ga0316579_10018430 | 3300031691 | Bacteria | 3073 |
| 9 | Ga0316579_10022791 | 3300031691 | Bacteria | 2804 |
| 10 | Ga0316576_10000143 | 3300031727 | Bacteria | 28100 |
| 11 | Ga0316576_10018634 | 3300031727 | Bacteria | 4742 |
| 12 | Ga0316576_10025300 | 3300031727 | Bacteria | 4154 |
| 13 | Ga0316576_10152603 | 3300031727 | Bacteria | 1741 |
| 14 | Ga0316578_10015512 | 3300031728 | Bacteria | 4099 |
| 15 | Ga0316578_10023550 | 3300031728 | Bacteria | 3446 |
| 16 | Ga0316577_10002889 | 3300031733 | Bacteria | 8591 |
| 17 | Ga0316577_10025486 | 3300031733 | Bacteria | 3289 |
| 18 | Ga0316577_10026517 | 3300031733 | Bacteria | 3228 |
| 19 | Ga0316583_10004542 | 3300032133 | Bacteria | 4951 |
| 20 | Ga0316583_10005164 | 3300032133 | Bacteria | 4681 |
| 21 | Ga0316583_10005538 | 3300032133 | Bacteria | 4532 |
| 22 | Ga0316583_10014307 | 3300032133 | Bacteria | 2862 |
| 23 | Ga0316585_10006150 | 3300032137 | Bacteria | 3423 |
| 24 | Ga0316585_10016260 | 3300032137 | Bacteria | 2239 |
| 25 | Ga0316580_10004933 | 3300032139 | Bacteria | 3880 |
| 26 | Ga0316593_10003851 | 3300032168 | Bacteria | 3776 |
| 27 | Ga0316593_10004911 | 3300032168 | Bacteria | 3479 |
| 28 | Ga0316593_10006193 | 3300032168 | Bacteria | 3216 |
| 29 | Ga0316593_10007410 | 3300032168 | Bacteria | 3015 |
| 30 | Ga0316587_1000087 | 3300033529 | Bacteria | 6464 |
| 31 | Ga0316596_1007991 | 3300033541 | Bacteria | 2509 |
| 32 | Ga0316574_0001940 | 3300035398 | Bacteria | 10144 |
| 33 | Ga0316574_0005098 | 3300035398 | Bacteria | 6979 |
| 34 | Ga0316574_0005264 | 3300035398 | Bacteria | 6886 |
| 35 | Ga0316574_0006161 | 3300035398 | Bacteria | 6459 |
| 36 | Ga0316574_0011115 | 3300035398 | Bacteria | 5108 |
| 37 | Ga0316574_0012969 | 3300035398 | Bacteria | 4781 |
| 38 | Ga0316574_0028471 | 3300035398 | Bacteria | 3371 |
| 39 | Ga0316582_0002212 | 3300036647 | Bacteria | 9026 |
| 40 | Ga0316582_0019674 | 3300036647 | Bacteria | 3957 |
| 41 | Ga0316582_0040030 | 3300036647 | Bacteria | 2922 |
| 42 | Ga0316582_0044852 | 3300036647 | Bacteria | 2781 |
| 43 | Ga0316582_0048624 | 3300036647 | Bacteria | 2682 |
| 44 | Ga0316582_0081155 | 3300036647 | Bacteria | 2118 |
| 45 | Ga0316582_0144197 | 3300036647 | Bacteria | 1607 |
| 46 | Ga0316582_0150792 | 3300036647 | Bacteria | 1572 |
| 47 | Ga0316582_0156713 | 3300036647 | Unclassified | 1541 |
| 48 | Ga0316584_0000809 | 3300036712 | Bacteria | 17599 |
| 49 | Ga0316584_0000948 | 3300036712 | Bacteria | 16554 |
| 50 | Ga0316584_0002179 | 3300036712 | Bacteria | 12271 |
| 51 | Ga0316584_0014956 | 3300036712 | Bacteria | 5543 |
| 52 | Ga0316584_0018807 | 3300036712 | Bacteria | 4987 |
| 53 | Ga0316584_0045504 | 3300036712 | Bacteria | 3276 |
| 54 | Ga0316584_0049097 | 3300036712 | Bacteria | 3154 |
| 55 | Ga0316584_0187744 | 3300036712 | Bacteria | 1529 |
| 56 | Ga0316584_0217393 | 3300036712 | Bacteria | 1405 |
| 57 | Ga0316581_0002356 | 3300037588 | Bacteria | 4504 |
| 58 | Ga0316581_0004682 | 3300037588 | Bacteria | 3509 |
| 59 | Ga0400484_08814 | 3300038725 | Bacteria | 4015 |
| 60 | Ga0400484_24122 | 3300038725 | Bacteria | 9111 |
| 61 | Ga0400484_35999 | 3300038725 | Bacteria | 2457 |
| 62 | Ga0400490_12012 | 3300038726 | Bacteria | 7852 |
| 63 | Ga0400490_18168 | 3300038726 | Bacteria | 53638 |
| 64 | Ga0400490_19561 | 3300038726 | Bacteria | 7249 |
| 65 | Ga0400490_50693 | 3300038726 | Bacteria | 47921 |
| 66 | Ga0400490_50872 | 3300038726 | Bacteria | 33578 |
| 67 | Ga0400485_02189 | 3300038735 | Bacteria | 9555 |
| 68 | Ga0400485_11431 | 3300038735 | Bacteria | 142174 |
| 69 | Ga0400485_11694 | 3300038735 | Bacteria | 3069 |
| 70 | Ga0400488_03743 | 3300038741 | Bacteria | 4894 |
| 71 | Ga0400488_08803 | 3300038741 | Bacteria | 1651 |
| 72 | Ga0400488_19208 | 3300038741 | Bacteria | 1822 |
| 73 | Ga0400488_37107 | 3300038741 | Bacteria | 2527 |
| 74 | Ga0400488_58086 | 3300038741 | Bacteria | 5353 |
| 75 | Ga0400486_01832 | 3300038742 | Bacteria | 1462 |
| 76 | Ga0400486_26250 | 3300038742 | Bacteria | 56114 |
| 77 | Ga0400486_28947 | 3300038742 | Bacteria | 19120 |
| 78 | Ga0400483_003240 | 3300039062 | Bacteria | 6217 |
| 79 | Ga0400483_045649 | 3300039062 | Bacteria | 7117 |
| 80 | Ga0400483_073094 | 3300039062 | Bacteria | 2366 |
| 81 | Ga0400483_089739 | 3300039062 | Bacteria | 12473 |
| 82 | Ga0400483_091273 | 3300039062 | Bacteria | 9708 |
| 83 | Ga0400483_108498 | 3300039062 | Bacteria | 3802 |
| 84 | Ga0400483_120597 | 3300039062 | Bacteria | 3854 |
| 85 | Ga0400483_191669 | 3300039062 | Bacteria | 6810 |
| 86 | Ga0400483_196120 | 3300039062 | Bacteria | 6127 |
| 87 | Ga0400483_229934 | 3300039062 | Bacteria | 5277 |
| 88 | Ga0400483_235420 | 3300039062 | Bacteria | 4076 |
| 89 | Ga0400483_284292 | 3300039062 | Bacteria | 1627 |
| 90 | Ga0400487_04272 | 3300039110 | Bacteria | 8844 |
| 91 | Ga0400487_25105 | 3300039110 | Bacteria | 2612 |
| 92 | Ga0400487_33396 | 3300039110 | Bacteria | 5015 |
| 93 | Ga0400487_34698 | 3300039110 | Bacteria | 4665 |
| 94 | Ga0400487_34970 | 3300039110 | Bacteria | 222491 |
| 95 | Ga0400487_65159 | 3300039110 | Bacteria | 37665 |
| 96 | Ga0451577_0000288 | 3300042876 | Bacteria | 97988 |
| 97 | Ga0453684_0001971 | 3300044712 | Bacteria | 52708 |
| 98 | Ga0453684_0003562 | 3300044712 | Bacteria | 34829 |
| 99 | Ga0453684_0010766 | 3300044712 | Bacteria | 15526 |
| 100 | Ga0451576_0080372 | 3300045051 | Bacteria | 3391 |
| 101 | Ga0501031_0080109 | 3300049568 | Bacteria | 2128 |
| 102 | Ga0501032_0084577 | 3300049569 | Bacteria | 2109 |
| 103 | Ga0501036_0004872 | 3300049572 | Bacteria | 10841 |
| 104 | Ga0501037_0076286 | 3300049573 | Bacteria | 2434 |
| 105 | Ga0501039_0009548 | 3300049575 | Bacteria | 7395 |
| 106 | Ga0501039_0075959 | 3300049575 | Bacteria | 2612 |
| 107 | Ga0501040_0019804 | 3300049576 | Bacteria | 4477 |
| 108 | Ga0501041_0069734 | 3300049577 | Bacteria | 2157 |
| 109 | Ga0501042_0036414 | 3300049578 | Bacteria | 3491 |
| 110 | Ga0501046_0052990 | 3300049580 | Bacteria | 3196 |
| 111 | Ga0501048_0009590 | 3300049582 | Bacteria | 7265 |
| 112 | Ga0501071_0008531 | 3300049587 | Bacteria | 6777 |
| 113 | Ga0501072_0117913 | 3300049588 | Bacteria | 2115 |
| 114 | Ga0501074_0029268 | 3300049590 | Bacteria | 3990 |
| 115 | Ga0501075_0144947 | 3300049591 | Bacteria | 1810 |
| 116 | Ga0501076_0082828 | 3300049592 | Bacteria | 2576 |
| 117 | Ga0501079_0087012 | 3300049741 | Bacteria | 2419 |
| 118 | Ga0501080_0043867 | 3300049742 | Bacteria | 4164 |
| 119 | Ga0501081_0010517 | 3300049743 | Bacteria | 6040 |
| 120 | Ga0501044_0040469 | 3300049823 | Bacteria | 4858 |
| 121 | nmdc:mga05p37_64776_c1 | 3300050507 | Bacteria | 4497 |
| 122 | Ga0501082_0051518 | 3300060353 | Bacteria | 3548 |
| 123 | Ga0501082_0125536 | 3300060353 | Bacteria | 2226 |
| 124 | Ga0530510_0158911 | 3300061734 | Bacteria | 1671 |
| 125 | 2894511070 | 2894510363 | Bacteria | 5121143 |
| 126 | 2989395261 | 2989392574 | Bacteria | 4554005 |
| 127 | 8002748741 | 8002745576 | Bacteria | 4840272 |
| 128 | 8054360096 | 8054357960 | Bacteria | 2867777 |
| 129 | 8057163768 | 8057160832 | Bacteria | 3268302 |
| 130 | Ga0316593_10000605 | |||
| 131 | Ga0265331_10008400 | |||
| 132 | Ga0265327_10008520 | |||
| 133 | Ga0265327_10018029 | |||
| 134 | Ga0265316_10000186 | |||
| 135 | Ga0316575_10019013 | |||
| 136 | Ga0316579_10008259 | |||
| 137 | Ga0316579_10018430 | |||
| 138 | Ga0316579_10022791 | |||
| 139 | Ga0316576_10000143 | |||
| 140 | Ga0316576_10018634 | |||
| 141 | Ga0316576_10025300 | |||
| 142 | Ga0316576_10152603 | |||
| 143 | Ga0316578_10015512 | |||
| 144 | Ga0316578_10023550 | |||
| 145 | Ga0316577_10002889 | |||
| 146 | Ga0316577_10025486 | |||
| 147 | Ga0316577_10026517 | |||
| 148 | Ga0316583_10004542 | |||
| 149 | Ga0316583_10005164 | |||
| 150 | Ga0316583_10005538 | |||
| 151 | Ga0316583_10014307 | |||
| 152 | Ga0316585_10006150 | |||
| 153 | Ga0316585_10016260 | |||
| 154 | Ga0316580_10004933 | |||
| 155 | Ga0316593_10003851 | |||
| 156 | Ga0316593_10004911 | |||
| 157 | Ga0316593_10006193 | |||
| 158 | Ga0316593_10007410 | |||
| 159 | Ga0316587_1000087 | |||
| 160 | Ga0316596_1007991 | |||
| 161 | Ga0316574_0001940 | |||
| 162 | Ga0316574_0005098 | |||
| 163 | Ga0316574_0005264 | |||
| 164 | Ga0316574_0006161 | |||
| 165 | Ga0316574_0011115 | |||
| 166 | Ga0316574_0012969 | |||
| 167 | Ga0316574_0028471 | |||
| 168 | Ga0316582_0002212 | |||
| 169 | Ga0316582_0019674 | |||
| 170 | Ga0316582_0040030 | |||
| 171 | Ga0316582_0044852 | |||
| 172 | Ga0316582_0048624 | |||
| 173 | Ga0316582_0081155 | |||
| 174 | Ga0316582_0144197 | |||
| 175 | Ga0316582_0150792 | |||
| 176 | Ga0316582_0156713 | |||
| 177 | Ga0316584_0000809 | |||
| 178 | Ga0316584_0000948 | |||
| 179 | Ga0316584_0002179 | |||
| 180 | Ga0316584_0014956 | |||
| 181 | Ga0316584_0018807 | |||
| 182 | Ga0316584_0045504 | |||
| 183 | Ga0316584_0049097 | |||
| 184 | Ga0316584_0187744 | |||
| 185 | Ga0316584_0217393 | |||
| 186 | Ga0316581_0002356 | |||
| 187 | Ga0316581_0004682 | |||
| 188 | Ga0400484_08814 | |||
| 189 | Ga0400484_24122 | |||
| 190 | Ga0400484_35999 | |||
| 191 | Ga0400490_12012 | |||
| 192 | Ga0400490_18168 | |||
| 193 | Ga0400490_19561 | |||
| 194 | Ga0400490_50693 | |||
| 195 | Ga0400490_50872 | |||
| 196 | Ga0400485_02189 | |||
| 197 | Ga0400485_11431 | |||
| 198 | Ga0400485_11694 | |||
| 199 | Ga0400488_03743 | |||
| 200 | Ga0400488_08803 | |||
| 201 | Ga0400488_19208 | |||
| 202 | Ga0400488_37107 | |||
| 203 | Ga0400488_58086 | |||
| 204 | Ga0400486_01832 | |||
| 205 | Ga0400486_26250 | |||
| 206 | Ga0400486_28947 | |||
| 207 | Ga0400483_003240 | |||
| 208 | Ga0400483_045649 | |||
| 209 | Ga0400483_073094 | |||
| 210 | Ga0400483_089739 | |||
| 211 | Ga0400483_091273 | |||
| 212 | Ga0400483_108498 | |||
| 213 | Ga0400483_120597 | |||
| 214 | Ga0400483_191669 | |||
| 215 | Ga0400483_196120 | |||
| 216 | Ga0400483_229934 | |||
| 217 | Ga0400483_235420 | |||
| 218 | Ga0400483_284292 | |||
| 219 | Ga0400487_04272 | |||
| 220 | Ga0400487_25105 | |||
| 221 | Ga0400487_33396 | |||
| 222 | Ga0400487_34698 | |||
| 223 | Ga0400487_34970 | |||
| 224 | Ga0400487_65159 | |||
| 225 | Ga0451577_0000288 | |||
| 226 | Ga0453684_0001971 | |||
| 227 | Ga0453684_0003562 | |||
| 228 | Ga0453684_0010766 | |||
| 229 | Ga0451576_0080372 | |||
| 230 | Ga0501031_0080109 | |||
| 231 | Ga0501032_0084577 | |||
| 232 | Ga0501036_0004872 | |||
| 233 | Ga0501037_0076286 | |||
| 234 | Ga0501039_0009548 | |||
| 235 | Ga0501039_0075959 | |||
| 236 | Ga0501040_0019804 | |||
| 237 | Ga0501041_0069734 | |||
| 238 | Ga0501042_0036414 | |||
| 239 | Ga0501046_0052990 | |||
| 240 | Ga0501048_0009590 | |||
| 241 | Ga0501071_0008531 | |||
| 242 | Ga0501072_0117913 | |||
| 243 | Ga0501074_0029268 | |||
| 244 | Ga0501075_0144947 | |||
| 245 | Ga0501076_0082828 | |||
| 246 | Ga0501079_0087012 | |||
| 247 | Ga0501080_0043867 | |||
| 248 | Ga0501081_0010517 | |||
| 249 | Ga0501044_0040469 | |||
| 250 | nmdc:mga05p37_64776_c1 | |||
| 251 | Ga0501082_0051518 | |||
| 252 | Ga0501082_0125536 | |||
| 253 | Ga0530510_0158911 | |||
| 254 | 2894511070 | |||
| 255 | 2989395261 | |||
| 256 | 8002748741 | |||
| 257 | 8054360096 | |||
| 258 | 8057163768 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6yu6-assembly1.cif.gz_A | crystal structure of mhst in complex with l-leucine | 0.9158 | 8 | 448 |
| 6yu6-assembly1.cif.gz_A | crystal structure of mhst in complex with l-leucine | 0.9099 | 8 | 448 |
| 4fxz-assembly1.cif.gz_A | crystal structure of leut-f253a bound to l-leucine from lipid bicelles | 0.8779 | 8 | 447 |
| 6nle-assembly1.cif.gz_A | x-ray structure of leut with v269 deletion | 0.8756 | 8 | 447 |
| 4mm8-assembly1.cif.gz_A | crystal structure of leubat (delta13 mutant) in complex with (r)-fluoxetine | 0.8738 | 8 | 447 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_F1QB29_9_534_1.10.4160.10 | Mainly Alpha;Orthogonal Bundle;Hydantoin permease;Hydantoin permease | 0.8721 | 8 | 450 | 1.10.4160.10 |
| af_F1R3N3_71_591_1.20.1740.10 | Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I | 0.8676 | 8 | 450 | 1.20.1740.10 |
| af_G5EBM5_82_644_1.20.1740.10 | Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I | 0.8659 | 8 | 450 | 1.20.1740.10 |
| af_Q9W1J0_57_603_1.20.1740.10 | Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I | 0.8644 | 8 | 450 | 1.20.1740.10 |
| af_Q58715_5_484_1.20.1740.10 | Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I | 0.8599 | 8 | 451 | 1.20.1740.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3M1G4I4-F1-model_v4 | Sodium-dependent transporter | 0.9868 | 9 | 452 |
GO:0016020
|
| AF-A0A7C1TZA8-F1-model_v4 | Transporter | 0.9856 | 9 | 400 |
GO:0015293
GO:0016020 |
| AF-I1YEL3-F1-model_v4 | Transporter | 0.9855 | 9 | 452 |
GO:0015293
GO:0016020 |
| AF-A0A1C3JMX0-F1-model_v4 | Transporter | 0.9846 | 9 | 448 |
GO:0015293
GO:0016020 |
| AF-A0A4R0PQ04-F1-model_v4 | deleted | 0.9842 | 4 | 452 |
|