F142388

General Info

Members Datasets Scaffolds Average Seq Length
129 99 258 316

Family's Representative Sequence

Representative Sequence 3300031733|Ga0316577_10040787|Ga0316577_100407872
Length 368
Sequence MSEFVDGWDYGGYTPVVTTSWKDRLHQVRRRKQVLNAEITPPESRQPDSRDETEAVTEDREFLSALRARLGAPAVHEHEPLAAHTSLRVGGPADILVVADNMESLRDAVAMAWEHDVPCRVLGAGSNVLVSDRGMPGLVVINRTKAIKFSEQNVRAESGASFSTVAQRCVTRGLAGLEWATGIPGTVGGAVVGNAGAWGSDVASTLHSALIMEPDGTVASWGVERLDYGYRQSALKGAKGPRDVAGSSRQPVVLEATFNLQPGDRHALRARVVEIAARRRASQPSGATCGSVFRNPPGDHAGRLIEAAGLKGEHRGNALISPVHANFIVNLGGASASDILTLIKLAYRSVKEQSGVRLELEIELLGRW

Samples

Sample ID Description Type Environment
1 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
65 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
68 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
69 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
88 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
89 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
97 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
98 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
99 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.22
Metatranscriptomes 0
Isolates 0.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.33
Rhizosphere 95.35
Stem 0
Stem Tuber 0
Unclassified 16.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316577_10040787 3300031733 Bacteria 2596
2 Ga0065704_10081544 3300005289 Bacteria 3742
3 Ga0070658_10184217 3300005327 Bacteria 1758
4 Ga0070683_100040619 3300005329 Bacteria 4278
5 Ga0070683_100054398 3300005329 Unclassified 3711
6 Ga0068868_100311962 3300005338 Bacteria 1338
7 Ga0070689_100231031 3300005340 Bacteria 1521
8 Ga0070691_10007814 3300005341 Bacteria 4894
9 Ga0070668_100050579 3300005347 Bacteria 3200
10 Ga0070675_100392851 3300005354 Bacteria 1236
11 Ga0070688_100052055 3300005365 Bacteria 2556
12 Ga0070709_10002274 3300005434 Bacteria 10413
13 Ga0070714_100007209 3300005435 Bacteria 8631
14 Ga0070714_100029118 3300005435 Bacteria 4589
15 Ga0070714_100030287 3300005435 Bacteria 4503
16 Ga0070713_100013830 3300005436 Bacteria 5973
17 Ga0070713_100061822 3300005436 Bacteria 3134
18 Ga0070706_100014020 3300005467 Bacteria 7405
19 Ga0070707_100004197 3300005468 Bacteria 13511
20 Ga0070698_100034862 3300005471 Bacteria 5206
21 Ga0070699_100000355 3300005518 Bacteria 44525
22 Ga0070699_100026170 3300005518 Bacteria 5033
23 Ga0070699_100076448 3300005518 Bacteria 2914
24 Ga0070679_100229296 3300005530 Bacteria 1817
25 Ga0070684_100000609 3300005535 Bacteria 24723
26 Ga0070696_100036138 3300005546 Bacteria 3405
27 Ga0070665_100273428 3300005548 Bacteria 1691
28 Ga0070704_100361556 3300005549 Bacteria 1228
29 Ga0070664_100040790 3300005564 Bacteria 3915
30 Ga0068857_100000178 3300005577 Bacteria 40384
31 Ga0068856_100004114 3300005614 Bacteria 14538
32 Ga0068864_100122695 3300005618 Unclassified 2325
33 Ga0068861_100109156 3300005719 Unclassified 2214
34 Ga0068863_100187913 3300005841 Bacteria 1985
35 Ga0068862_100011092 3300005844 Bacteria 7443
36 Ga0070717_10011385 3300006028 Bacteria 6752
37 Ga0070716_100020616 3300006173 Bacteria 3462
38 Ga0075428_100030513 3300006844 Bacteria 5961
39 Ga0075428_100180167 3300006844 Bacteria 2288
40 Ga0075431_100029467 3300006847 Bacteria 5650
41 Ga0075431_100093106 3300006847 Bacteria 3111
42 Ga0075434_100009213 3300006871 Bacteria 9197
43 Ga0114129_10382201 3300009147 Bacteria 1859
44 Ga0105238_10448481 3300009551 Bacteria 1287
45 Ga0157369_10006793 3300013105 Bacteria 13198
46 Ga0213874_10042977 3300021377 Unclassified 1359
47 Ga0207699_10000095 3300025906 Bacteria 64018
48 Ga0207684_10010093 3300025910 Bacteria 8318
49 Ga0207652_10172123 3300025921 Bacteria 1943
50 Ga0207646_10009430 3300025922 Bacteria 9649
51 Ga0207646_10050586 3300025922 Bacteria 3718
52 Ga0207659_10265836 3300025926 Bacteria 1397
53 Ga0207700_10001552 3300025928 Bacteria 13029
54 Ga0207664_10003546 3300025929 Bacteria 10421
55 Ga0207664_10012085 3300025929 Bacteria 6165
56 Ga0207664_10242494 3300025929 Bacteria 1570
57 Ga0207665_10004648 3300025939 Bacteria 9120
58 Ga0207661_10002130 3300025944 Bacteria 13615
59 Ga0207661_10084853 3300025944 Unclassified 2624
60 Ga0207678_10328781 3300026067 Bacteria 1316
61 Ga0207702_10011844 3300026078 Bacteria 7258
62 Ga0207674_10000157 3300026116 Bacteria 80435
63 Ga0207675_100235137 3300026118 Unclassified 1769
64 Ga0268265_10117444 3300028380 Bacteria 2185
65 Ga0265323_10062739 3300028653 Bacteria 1288
66 Ga0265332_10005381 3300031238 Bacteria 5909
67 Ga0265328_10031810 3300031239 Bacteria 1960
68 Ga0265339_10000839 3300031249 Bacteria 23710
69 Ga0265331_10049401 3300031250 Bacteria 2020
70 Ga0265314_10001951 3300031711 Bacteria 21973
71 Ga0265342_10033316 3300031712 Bacteria 3168
72 Ga0316577_10016239 3300031733 Bacteria 4101
73 Ga0307413_10008063 3300031824 Bacteria 4943
74 Ga0307410_10289561 3300031852 Bacteria 1288
75 Ga0307409_100181589 3300031995 Bacteria 1863
76 Ga0307411_10010586 3300032005 Bacteria 4927
77 Ga0373953_0147397 3300035117 Unclassified 1008
78 Ga0373955_0205288 3300035172 Bacteria 1174
79 Ga0373937_0033137 3300036401 Bacteria 4690
80 Ga0316582_0010629 3300036647 Bacteria 5050
81 Ga0316582_0053888 3300036647 Bacteria 2559
82 Ga0316584_0044077 3300036712 Bacteria 3327
83 Ga0316584_0059338 3300036712 Bacteria 2865
84 Ga0400489_72872 3300039093 Unclassified 1972
85 Ga0436361_0934830 3300039447 Bacteria 3228
86 Ga0436363_1401438 3300039450 Unclassified 1498
87 Ga0436362_0456770 3300039453 Bacteria 1683
88 Ga0451577_0000138 3300042876 Bacteria 161887
89 Ga0451577_0016003 3300042876 Bacteria 6959
90 Ga0451577_0195854 3300042876 Unclassified 1824
91 Ga0451577_0217965 3300042876 Unclassified 1725
92 Ga0451577_0292145 3300042876 Bacteria 1477
93 Ga0453683_0000255 3300044673 Bacteria 70114
94 Ga0453684_0000466 3300044712 Bacteria 161109
95 Ga0453684_0001415 3300044712 Bacteria 69097
96 Ga0453684_0004249 3300044712 Bacteria 30622
97 Ga0453684_0007259 3300044712 Bacteria 20517
98 Ga0453684_0023317 3300044712 Bacteria 9126
99 Ga0453684_0051932 3300044712 Bacteria 5366
100 Ga0453684_0056186 3300044712 Bacteria 5108
101 Ga0453684_0119516 3300044712 Bacteria 3185
102 Ga0453684_0165784 3300044712 Bacteria 2608
103 Ga0453684_0355898 3300044712 Bacteria 1649
104 Ga0466959_0201900 3300045049 Bacteria 1384
105 Ga0451576_0119027 3300045051 Unclassified 2749
106 Ga0495594_0112334 3300046499 Bacteria 1537
107 Ga0495674_0068947 3300047319 Bacteria 3059
108 Ga0496104_0017604 3300048907 Bacteria 6511
109 Ga0496112_0010773 3300048915 Bacteria 8315
110 Ga0496113_0047027 3300048916 Bacteria 3206
111 Ga0501040_0138225 3300049576 Unclassified 1715
112 Ga0501071_0158358 3300049587 Unclassified 1691
113 Ga0501072_0036732 3300049588 Bacteria 3841
114 Ga0501073_0147756 3300049589 Unclassified 1629
115 Ga0501074_0180414 3300049590 Unclassified 1506
116 Ga0501075_0129680 3300049591 Bacteria 1921
117 Ga0501075_0154696 3300049591 Unclassified 1748
118 Ga0501077_0014513 3300049593 Bacteria 4950
119 Ga0501079_0157123 3300049741 Unclassified 1772
120 Ga0501079_0447068 3300049741 Unclassified 1015
121 Ga0501083_0067777 3300049744 Bacteria 2375
122 Ga0501045_0063280 3300049824 Unclassified 2715
123 nmdc:mga09592_312412_c1 3300050508 Bacteria 1362
124 nmdc:mga06r32_27973_c1 3300050510 Bacteria 5273
125 nmdc:mga08y16_318057_c1 3300050511 Bacteria 1602
126 nmdc:mga0n895_52075_c1 3300050512 Bacteria 4017
127 Ga0495612_0007894 3300053078 Bacteria 4338
128 Ga0530510_0313488 3300061734 Unclassified 1175
129 2929299439 2929297113 Bacteria 3141306
130 Ga0316577_10040787
131 Ga0065704_10081544
132 Ga0070658_10184217
133 Ga0070683_100040619
134 Ga0070683_100054398
135 Ga0068868_100311962
136 Ga0070689_100231031
137 Ga0070691_10007814
138 Ga0070668_100050579
139 Ga0070675_100392851
140 Ga0070688_100052055
141 Ga0070709_10002274
142 Ga0070714_100007209
143 Ga0070714_100029118
144 Ga0070714_100030287
145 Ga0070713_100013830
146 Ga0070713_100061822
147 Ga0070706_100014020
148 Ga0070707_100004197
149 Ga0070698_100034862
150 Ga0070699_100000355
151 Ga0070699_100026170
152 Ga0070699_100076448
153 Ga0070679_100229296
154 Ga0070684_100000609
155 Ga0070696_100036138
156 Ga0070665_100273428
157 Ga0070704_100361556
158 Ga0070664_100040790
159 Ga0068857_100000178
160 Ga0068856_100004114
161 Ga0068864_100122695
162 Ga0068861_100109156
163 Ga0068863_100187913
164 Ga0068862_100011092
165 Ga0070717_10011385
166 Ga0070716_100020616
167 Ga0075428_100030513
168 Ga0075428_100180167
169 Ga0075431_100029467
170 Ga0075431_100093106
171 Ga0075434_100009213
172 Ga0114129_10382201
173 Ga0105238_10448481
174 Ga0157369_10006793
175 Ga0213874_10042977
176 Ga0207699_10000095
177 Ga0207684_10010093
178 Ga0207652_10172123
179 Ga0207646_10009430
180 Ga0207646_10050586
181 Ga0207659_10265836
182 Ga0207700_10001552
183 Ga0207664_10003546
184 Ga0207664_10012085
185 Ga0207664_10242494
186 Ga0207665_10004648
187 Ga0207661_10002130
188 Ga0207661_10084853
189 Ga0207678_10328781
190 Ga0207702_10011844
191 Ga0207674_10000157
192 Ga0207675_100235137
193 Ga0268265_10117444
194 Ga0265323_10062739
195 Ga0265332_10005381
196 Ga0265328_10031810
197 Ga0265339_10000839
198 Ga0265331_10049401
199 Ga0265314_10001951
200 Ga0265342_10033316
201 Ga0316577_10016239
202 Ga0307413_10008063
203 Ga0307410_10289561
204 Ga0307409_100181589
205 Ga0307411_10010586
206 Ga0373953_0147397
207 Ga0373955_0205288
208 Ga0373937_0033137
209 Ga0316582_0010629
210 Ga0316582_0053888
211 Ga0316584_0044077
212 Ga0316584_0059338
213 Ga0400489_72872
214 Ga0436361_0934830
215 Ga0436363_1401438
216 Ga0436362_0456770
217 Ga0451577_0000138
218 Ga0451577_0016003
219 Ga0451577_0195854
220 Ga0451577_0217965
221 Ga0451577_0292145
222 Ga0453683_0000255
223 Ga0453684_0000466
224 Ga0453684_0001415
225 Ga0453684_0004249
226 Ga0453684_0007259
227 Ga0453684_0023317
228 Ga0453684_0051932
229 Ga0453684_0056186
230 Ga0453684_0119516
231 Ga0453684_0165784
232 Ga0453684_0355898
233 Ga0466959_0201900
234 Ga0451576_0119027
235 Ga0495594_0112334
236 Ga0495674_0068947
237 Ga0496104_0017604
238 Ga0496112_0010773
239 Ga0496113_0047027
240 Ga0501040_0138225
241 Ga0501071_0158358
242 Ga0501072_0036732
243 Ga0501073_0147756
244 Ga0501074_0180414
245 Ga0501075_0129680
246 Ga0501075_0154696
247 Ga0501077_0014513
248 Ga0501079_0157123
249 Ga0501079_0447068
250 Ga0501083_0067777
251 Ga0501045_0063280
252 nmdc:mga09592_312412_c1
253 nmdc:mga06r32_27973_c1
254 nmdc:mga08y16_318057_c1
255 nmdc:mga0n895_52075_c1
256 Ga0495612_0007894
257 Ga0530510_0313488
258 2929299439

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02873

MurB_C

UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain

267

365

0.97

PF01565

FAD_binding_4

FAD binding domain

93

222

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pyt-assembly1.cif.gz_A crystal structure of a murb family ep-udp-n-acetylglucosamine reductase 0.9605 5 290
1hsk-assembly1.cif.gz_A crystal structure of s. aureus murb 0.9392 6 293
3tx1-assembly1.cif.gz_A x-ray crystal structure of listeria monocytogenes egd-e udp-n-acetylenolpyruvylglucosamine reductase (murb) 0.9367 1 290
2gqu-assembly1.cif.gz_A crystal structure of udp-n-acetylenolpyruvylglucosamine reductase (murb) from thermus caldophilus 0.9268 5 286
5jzx-assembly1.cif.gz_C crystal structure of udp-n-acetylenolpyruvoylglucosamine reductase (murb) from mycobacterium tuberculosis 0.9174 1 291
ID Description Score Start End Superfamily
2gquA03 Alpha Beta;Alpha-Beta Complex;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1;UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 0.9676 206 283 3.90.78.10
3tx1A03 Alpha Beta;Alpha-Beta Complex;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1;UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 0.9671 210 290 3.90.78.10
4pytA02 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9452 79 205 3.30.465.10
4pytA01 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 0.9323 5 76 3.30.43.10
4pytA02 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9311 79 205 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A845ZPU9-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase C-terminal domain-containing protein 0.9921 210 288 GO:0005829
GO:0008360
GO:0008762
GO:0009252
GO:0050660
GO:0051301
GO:0071555
AF-A0A413T9M6-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase) 0.9844 6 287 GO:0005829
GO:0008360
GO:0008762
GO:0009252
GO:0051301
GO:0071555
GO:0071949
AF-A0A356M3B5-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase) 0.9832 6 289 GO:0005829
GO:0008360
GO:0008762
GO:0009252
GO:0051301
GO:0071555
GO:0071949
AF-F3AMQ8-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase) 0.98 6 290 GO:0005829
GO:0008360
GO:0008762
GO:0009252
GO:0051301
GO:0071555
GO:0071949
AF-A0A353QIG2-F1-model_v4 UDP-N-acetylmuramate dehydrogenase (EC 1.3.1.98) 0.9794 5 287 GO:0005829
GO:0008360
GO:0008762
GO:0009252
GO:0051301
GO:0071555
GO:0071949

Map