F142336

General Info

Members Datasets Scaffolds Average Seq Length
129 67 127 363

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10176475|Ga0307513_101764752
Length 391
Sequence MFFTIGTPSHVVETHFNFPYMRYAGPIKFASTRADFFTTLNQRVNEYFKSRNISRHANAEMVIKTTVMCASYFGLYIVLLTGVITNPWLMLGTCVVMGIAVAGIGLSVMHDANHGAYSHKSWVNDLLGYSLNLVGGNSFNWKVQHNVLHHTYTNIHDVDEDISPRGILRMTPYGEWKSFHRFQHVYAWFFYGLMTLVWVSVKDFVRIGKYHKEGLVKKQKTTMRKELVILAITKILYFTFAVAVPLLLMDITWWQWLIGFLTMHYVAGFILAIIFQPAHVIDGTEYPMPNEEGQMENSWAIHQLYTTTNFANDNMILSWYAGGLNFQVEHHLFPNICHVHYRNISSIVMETAREFGLPYKSAPTLAKALSGHGKMLKELGKKPSFELVPQV

Samples

Sample ID Description Type Environment
1 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
2 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
3 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
13 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
17 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
18 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
22 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
23 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
24 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
25 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
26 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
27 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
28 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
29 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
30 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
31 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
32 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
33 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
34 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
35 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
36 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
37 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
38 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
39 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
40 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
41 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
42 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
43 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
44 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
45 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
46 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
47 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
49 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
53 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
54 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
55 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
56 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
57 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
58 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
59 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
60 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
61 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
62 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
63 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
64 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
65 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
66 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
67 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.35
Metatranscriptomes 2.33
Isolates 2.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.5
Nodule 0
Rhizoplane 0.78
Rhizosphere 55.81
Stem 0
Stem Tuber 0
Unclassified 27.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10006062 3300003316 Bacteria 2946
2 rootH1_10006062 3300003323 Bacteria 8254
3 rootH1_10010915 3300003316 Bacteria 15741
4 rootH1_10092270 3300003316 Unclassified 3422
5 rootH2_10004691 3300003320 Bacteria 39474
6 rootH2_10220076 3300003320 Bacteria 2723
7 rootL2_10010620 3300003322 Bacteria 20251
8 rootL2_10025259 3300003322 Bacteria 15545
9 rootL2_10029512 3300003322 Bacteria 12177
10 rootL2_10044081 3300003322 Bacteria 9443
11 rootL2_10045326 3300003322 Bacteria 3982
12 rootL2_10091379 3300003322 Bacteria 2400
13 rootL2_10254485 3300003322 Bacteria 1868
14 rootL2_10267370 3300003322 Unclassified 1929
15 rootH1_10006585 3300003323 Bacteria 90181
16 rootH1_10020272 3300003323 Bacteria 13398
17 rootH1_10049608 3300003323 Bacteria 5396
18 rootH1_10052942 3300003323 Bacteria 20983
19 rootH1_10090588 3300003323 Bacteria 4176
20 rootH1_10093300 3300003323 Bacteria 6336
21 rootH1_10106660 3300003323 Bacteria 9924
22 rootH1_10217057 3300003323 Bacteria 3724
23 rootH1_10296793 3300003323 Bacteria 1783
24 Ga0055530_10012432 3300003791 Bacteria 2969
25 Ga0055531_10000189 3300003794 Bacteria 68668
26 Ga0055531_10000426 3300003794 Bacteria 40008
27 Ga0065165_1000481 3300005262 Bacteria 62027
28 Ga0070713_100159696 3300005436 Bacteria 2011
29 Ga0068851_10000042 3300005834 Bacteria 88904
30 Ga0075366_10137652 3300006195 Bacteria 1475
31 Ga0075431_100294341 3300006847 Bacteria 1641
32 Ga0111539_10027052 3300009094 Bacteria 7005
33 Ga0111539_10140277 3300009094 Bacteria 2830
34 Ga0157372_10345859 3300013307 Bacteria 1732
35 Ga0157380_10001658 3300014326 Bacteria 14680
36 Ga0157380_10059263 3300014326 Bacteria 3054
37 Ga0209050_1004212 3300025298 Bacteria 9924
38 Ga0209257_1000005 3300025304 Bacteria 1592528
39 Ga0209257_1000007 3300025304 Bacteria 1564415
40 Ga0207656_10000087 3300025321 Bacteria 34092
41 Ga0207428_10022990 3300027907 Bacteria 5250
42 Ga0307515_10000007 3300028794 Bacteria 719669
43 Ga0307515_10000009 3300028794 Bacteria 653206
44 Ga0307515_10000681 3300028794 Bacteria 78150
45 Ga0307515_10081149 3300028794 Bacteria 4217
46 Ga0307515_10084018 3300028794 Bacteria 4095
47 Ga0307515_10149289 3300028794 Bacteria 2454
48 Ga0307515_10182726 3300028794 Unclassified 2040
49 Ga0307515_10246575 3300028794 Bacteria 1547
50 Ga0307515_10274432 3300028794 Unclassified 1402
51 Ga0307513_10176475 3300031456 Unclassified 2006
52 Ga0307509_10017686 3300031507 Bacteria 8195
53 Ga0307509_10023170 3300031507 Bacteria 6982
54 Ga0307509_10209901 3300031507 Bacteria 1773
55 Ga0307408_100002626 3300031548 Bacteria 12506
56 Ga0307408_100036787 3300031548 Bacteria 3443
57 Ga0307413_10042532 3300031824 Bacteria 2671
58 Ga0307413_10198486 3300031824 Bacteria 1447
59 Ga0307406_10105989 3300031901 Bacteria 1925
60 Ga0307407_10048066 3300031903 Bacteria 2426
61 Ga0307407_10055875 3300031903 Unclassified 2283
62 Ga0307412_10004183 3300031911 Bacteria 8046
63 Ga0307412_10092765 3300031911 Unclassified 2117
64 Ga0307409_100036876 3300031995 Bacteria 3599
65 Ga0307409_100043446 3300031995 Unclassified 3375
66 Ga0307416_100000227 3300032002 Bacteria 29912
67 Ga0307416_100003751 3300032002 Bacteria 9014
68 Ga0307415_100010425 3300032126 Bacteria 5264
69 Ga0307415_100045421 3300032126 Unclassified 2945
70 Ga0373927_0013659 3300035695 Bacteria 5392
71 Ga0373927_0137031 3300035695 Bacteria 1600
72 Ga0316584_0304080 3300036712 Bacteria 1154
73 Ga0395899_0000673 3300037312 Bacteria 34566
74 Ga0395900_0025680 3300037418 Bacteria 6031
75 Ga0395905_0000288 3300037471 Bacteria 73714
76 Ga0395901_0005651 3300038443 Bacteria 12655
77 Ga0451807_1657803 3300041486 Bacteria 1738
78 Ga0451577_0013153 3300042876 Bacteria 7755
79 Ga0451577_0022369 3300042876 Bacteria 5772
80 Ga0451577_0028032 3300042876 Bacteria 5096
81 Ga0453683_0019003 3300044673 Bacteria 4407
82 Ga0453683_0046809 3300044673 Bacteria 2711
83 Ga0453684_0002565 3300044712 Bacteria 43640
84 Ga0453684_0003519 3300044712 Bacteria 35074
85 Ga0453684_0003770 3300044712 Bacteria 33529
86 Ga0453684_0003902 3300044712 Bacteria 32760
87 Ga0453684_0046950 3300044712 Bacteria 5735
88 Ga0451576_0002248 3300045051 Bacteria 29543
89 Ga0451576_0005918 3300045051 Bacteria 15149
90 Ga0451576_0015202 3300045051 Bacteria 8539
91 Ga0451576_0042568 3300045051 Bacteria 4794
92 Ga0451576_0164323 3300045051 Bacteria 2316
93 Ga0495638_0000232 3300046460 Bacteria 76388
94 Ga0495621_0072023 3300046539 Bacteria 1275
95 Ga0495686_0105224 3300047472 Bacteria 1698
96 Ga0501310_002891 3300049130 Unclassified 1656
97 Ga0501300_002665 3300049523 Bacteria 2675
98 Ga0501313_003276 3300049529 Unclassified 1599
99 Ga0501315_000368 3300049531 Bacteria 3003
100 Ga0501034_0290877 3300049571 Bacteria 1572
101 Ga0501202_007191 3300049652 Bacteria 2008
102 Ga0501217_005112 3300049661 Bacteria 2727
103 Ga0501217_007693 3300049661 Bacteria 2315
104 Ga0501222_007828 3300049662 Bacteria 1425
105 Ga0501236_002024 3300049670 Unclassified 2316
106 Ga0501238_005577 3300049671 Unclassified 1599
107 Ga0501242_005232 3300049674 Bacteria 1456
108 Ga0501247_006224 3300049677 Unclassified 1345
109 Ga0501257_001274 3300049686 Bacteria 5184
110 Ga0501257_003664 3300049686 Bacteria 3315
111 Ga0501259_006397 3300049688 Unclassified 1873
112 Ga0501225_0009327 3300049705 Bacteria 2797
113 Ga0501264_001265 3300049761 Bacteria 2836
114 nmdc:mga08y16_158585_c1 3300050511 Bacteria 2351
115 nmdc:mga08y16_43112_c1 3300050511 Bacteria 4727
116 Ga0500557_009314 3300053105 Bacteria 2401
117 Ga0500604_0000516 3300053151 Bacteria 10689
118 Ga0500604_0009338 3300053151 Unclassified 2613
119 Ga0500616_0000009 3300053153 Bacteria 779095
120 Ga0500616_0000013 3300053153 Bacteria 674172
121 Ga0500616_0029284 3300053153 Bacteria 3031
122 Ga0500622_0000017 3300053156 Bacteria 332114
123 Ga0500622_0000034 3300053156 Bacteria 187647
124 Ga0500622_0000055 3300053156 Bacteria 143073
125 Ga0500622_0003222 3300053156 Bacteria 11099
126 Ga0500622_0003253 3300053156 Bacteria 11021
127 Ga0500622_0015590 3300053156 Bacteria 4068

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2884634485 2884634940 317
2 3300014326 Ga0157380_10001658 Ga0157380_100016583 320
3 3300050511 nmdc:mga08y16_43112_c1 nmdc:mga08y16_43112_c1_1040_2002 320
4 3300049661 Ga0501217_007693 Ga0501217_007693_1289_2263 324
5 3300028794 Ga0307515_10182726 Ga0307515_101827262 326
6 3300009094 Ga0111539_10027052 Ga0111539_100270522 327
7 3300027907 Ga0207428_10022990 Ga0207428_100229905 327
8 3300036712 Ga0316584_0304080 Ga0316584_0304080_43_1035 327
9 3300028794 Ga0307515_10149289 Ga0307515_101492893 328
10 3300049571 Ga0501034_0290877 Ga0501034_0290877_495_1487 330
11 3300049652 Ga0501202_007191 Ga0501202_007191_278_1270 330
12 3300031507 Ga0307509_10017686 Ga0307509_100176867 331
13 3300003322 rootL2_10254485 rootL2_102544851 334
14 3300028794 Ga0307515_10000681 Ga0307515_1000068117 334
15 3300049670 Ga0501236_002024 Ga0501236_002024_317_1324 335
16 3300049761 Ga0501264_001265 Ga0501264_001265_1548_2555 335
17 3300003323 rootH1_10106660 rootH1_101066606 338
18 3300028794 Ga0307515_10274432 Ga0307515_102744321 342
19 3300028794 Ga0307515_10081149 Ga0307515_100811492 349
20 3300005834 Ga0068851_10000042 Ga0068851_1000004221 351
21 3300025321 Ga0207656_10000087 Ga0207656_1000008719 351
22 3300031507 Ga0307509_10209901 Ga0307509_102099012 351
23 3300047472 Ga0495686_0105224 Ga0495686_0105224_301_1371 353
24 3300028794 Ga0307515_10246575 Ga0307515_102465752 354
25 3300045051 Ga0451576_0002248 Ga0451576_0002248_15844_16956 354
26 iso_pu_bacteria 2919692658 2919694706 354
27 3300005436 Ga0070713_100159696 Ga0070713_1001596961 356
28 3300037312 Ga0395899_0000673 Ga0395899_0000673_29584_30660 357
29 3300003323 rootH1_10217057 rootH1_102170573 359
30 iso_pu_bacteria 2890804823 2890806633 359
31 3300044712 Ga0453684_0003770 Ga0453684_0003770_2227_3312 360
32 3300013307 Ga0157372_10345859 Ga0157372_103458592 361
33 3300045051 Ga0451576_0164323 Ga0451576_0164323_383_1468 361
34 3300046539 Ga0495621_0072023 Ga0495621_0072023_166_1251 361
35 3300049130 Ga0501310_002891 Ga0501310_002891_63_1190 361
36 3300049529 Ga0501313_003276 Ga0501313_003276_459_1586 361
37 3300049531 Ga0501315_000368 Ga0501315_000368_565_1692 361
38 3300049662 Ga0501222_007828 Ga0501222_007828_261_1388 361
39 3300049686 Ga0501257_001274 Ga0501257_001274_2429_3556 361
40 3300049688 Ga0501259_006397 Ga0501259_006397_127_1254 361
41 3300003323 rootH1_10296793 rootH1_102967932 362
42 3300038443 Ga0395901_0005651 Ga0395901_0005651_5784_6875 362
43 3300044712 Ga0453684_0003519 Ga0453684_0003519_12529_13644 362
44 3300003322 rootL2_10010620 rootL2_1001062016 363
45 3300003322 rootL2_10267370 rootL2_102673702 363
46 3300006195 Ga0075366_10137652 Ga0075366_101376522 363
47 3300006847 Ga0075431_100294341 Ga0075431_1002943413 363
48 3300009094 Ga0111539_10140277 Ga0111539_101402773 363
49 3300031548 Ga0307408_100002626 Ga0307408_1000026265 363
50 3300049677 Ga0501247_006224 Ga0501247_006224_165_1256 363
51 3300050511 nmdc:mga08y16_158585_c1 nmdc:mga08y16_158585_c1_715_1827 363
52 3300053153 Ga0500616_0000009 Ga0500616_0000009_60675_61769 363
53 3300031548 Ga0307408_100036787 Ga0307408_1000367872 365
54 3300031824 Ga0307413_10042532 Ga0307413_100425322 365
55 3300031824 Ga0307413_10198486 Ga0307413_101984862 365
56 3300031901 Ga0307406_10105989 Ga0307406_101059892 365
57 3300031903 Ga0307407_10048066 Ga0307407_100480663 365
58 3300031903 Ga0307407_10055875 Ga0307407_100558753 365
59 3300031911 Ga0307412_10004183 Ga0307412_100041837 365
60 3300031911 Ga0307412_10092765 Ga0307412_100927652 365
61 3300031995 Ga0307409_100036876 Ga0307409_1000368763 365
62 3300031995 Ga0307409_100043446 Ga0307409_1000434462 365
63 3300032002 Ga0307416_100000227 Ga0307416_10000022727 365
64 3300032002 Ga0307416_100003751 Ga0307416_1000037513 365
65 3300032126 Ga0307415_100010425 Ga0307415_1000104253 365
66 3300032126 Ga0307415_100045421 Ga0307415_1000454212 365
67 3300042876 Ga0451577_0028032 Ga0451577_0028032_956_2056 365
68 3300044673 Ga0453683_0019003 Ga0453683_0019003_2685_3785 365
69 3300045051 Ga0451576_0015202 Ga0451576_0015202_7014_8114 365
70 3300003323 rootH1_10052942 rootH1_1005294214 366
71 3300014326 Ga0157380_10059263 Ga0157380_100592632 366
72 3300028794 Ga0307515_10000007 Ga0307515_10000007222 366
73 3300028794 Ga0307515_10084018 Ga0307515_100840183 366
74 3300003322 rootL2_10025259 rootL2_1002525911 367
75 3300003323 rootH1_10049608 rootH1_100496083 367
76 3300003794 Ga0055531_10000189 Ga0055531_1000018928 367
77 3300005262 Ga0065165_1000481 Ga0065165_100048132 367
78 3300025304 Ga0209257_1000005 Ga0209257_1000005537 367
79 3300035695 Ga0373927_0013659 Ga0373927_0013659_1730_2839 367
80 3300037471 Ga0395905_0000288 Ga0395905_0000288_34346_35458 367
81 3300049674 Ga0501242_005232 Ga0501242_005232_204_1310 367
82 3300049686 Ga0501257_003664 Ga0501257_003664_668_1774 367
83 3300049705 Ga0501225_0009327 Ga0501225_0009327_518_1624 367
84 3300037418 Ga0395900_0025680 Ga0395900_0025680_2334_3473 368
85 3300044673 Ga0453683_0046809 Ga0453683_0046809_1043_2152 368
86 3300044712 Ga0453684_0046950 Ga0453684_0046950_3714_4823 368
87 3300045051 Ga0451576_0005918 Ga0451576_0005918_11077_12186 368
88 3300003320 rootH2_10220076 rootH2_102200764 369
89 3300031507 Ga0307509_10023170 Ga0307509_100231704 369
90 3300053156 Ga0500622_0000034 Ga0500622_0000034_140649_141806 369
91 3300053156 Ga0500622_0015590 Ga0500622_0015590_2942_4057 369
92 3300003316 rootH1_10010915 rootH1_1001091510 370
93 3300003322 rootL2_10044081 rootL2_100440819 370
94 3300003323 rootH1_10093300 rootH1_100933004 370
95 3300028794 Ga0307515_10000009 Ga0307515_10000009233 370
96 3300031456 Ga0307513_10176475 Ga0307513_101764752 370
97 3300035695 Ga0373927_0137031 Ga0373927_0137031_45_1157 370
98 3300042876 Ga0451577_0013153 Ga0451577_0013153_6054_7169 370
99 3300044712 Ga0453684_0002565 Ga0453684_0002565_11502_12617 370
100 3300045051 Ga0451576_0042568 Ga0451576_0042568_1723_2838 370
101 3300049523 Ga0501300_002665 Ga0501300_002665_588_1706 370
102 3300049661 Ga0501217_005112 Ga0501217_005112_132_1250 370
103 3300049671 Ga0501238_005577 Ga0501238_005577_358_1476 370
104 3300053156 Ga0500622_0000055 Ga0500622_0000055_106441_107601 370
105 3300046460 Ga0495638_0000232 Ga0495638_0000232_45559_46680 371
106 3300053105 Ga0500557_009314 Ga0500557_009314_210_1331 371
107 3300053151 Ga0500604_0000516 Ga0500604_0000516_3633_4796 371
108 3300053153 Ga0500616_0000013 Ga0500616_0000013_29134_30255 371
109 3300003316 rootH1_10092270 rootH1_100922703 373
110 3300003323 rootH1_10006585 rootH1_1000658551 373
111 3300041486 Ga0451807_1657803 Ga0451807_1657803_527_1648 373
112 3300003322 rootL2_10091379 rootL2_100913792 374
113 3300003794 Ga0055531_10000426 Ga0055531_100004263 374
114 3300025304 Ga0209257_1000007 Ga0209257_1000007471 374
115 3300042876 Ga0451577_0022369 Ga0451577_0022369_1633_2760 374
116 3300044712 Ga0453684_0003902 Ga0453684_0003902_26350_27477 374
117 3300003316 rootH1_10006062 rootH1_100060621 375
118 3300003320 rootH2_10004691 rootH2_1000469136 375
119 3300003322 rootL2_10029512 rootL2_100295123 375
120 3300003322 rootL2_10045326 rootL2_100453262 375
121 3300003323 rootH1_10020272 rootH1_1002027212 375
122 3300003323 rootH1_10090588 rootH1_100905883 375
123 3300003791 Ga0055530_10012432 Ga0055530_100124323 375
124 3300025298 Ga0209050_1004212 Ga0209050_100421211 375
125 3300053151 Ga0500604_0009338 Ga0500604_0009338_764_1903 375
126 3300053153 Ga0500616_0029284 Ga0500616_0029284_118_1254 375
127 3300053156 Ga0500622_0000017 Ga0500622_0000017_188321_189463 375
128 3300053156 Ga0500622_0003222 Ga0500622_0003222_6309_7448 375
129 3300053156 Ga0500622_0003253 Ga0500622_0003253_7986_9122 375

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00487

FA_desaturase

Fatty acid desaturase

86

363

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f6t-assembly1.cif.gz_A cryo-em structure of alkane 1-monooxygenase alkb-alkg complex from fontimonas thermophila 0.521 4 366
8f6t-assembly1.cif.gz_A cryo-em structure of alkane 1-monooxygenase alkb-alkg complex from fontimonas thermophila 0.4529 4 366
8jd1-assembly1.cif.gz_3 cryo-em structure of mglu2-mglu3 heterodimer in rco state 0.2926 15 249
8jcv-assembly1.cif.gz_3 cryo-em structure of mglu2-mglu3 heterodimer in presence of ly341495 (dimerization mode ii) 0.2906 15 250
1jv6-assembly1.cif.gz_A bacteriorhodopsin d85s/f219l double mutant at 2.00 angstrom resolution 0.2722 14 254
ID Description Score Start End Superfamily
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.647 73 342 3.30.40.10
af_A0A0R4J2X1_81_350_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.6225 73 342 3.30.40.10
2m3gC00 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2757 5 246 1.20.1070.10
af_Q91ZB7_5_285_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2731 13 256 1.20.1070.10
af_Q18071_45_308_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2702 40 335 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A364Y5E7-F1-model_v4 Acyl-CoA desaturase 0.9881 5 362 GO:0006629
GO:0016020
GO:0016717
AF-A0A3D4CH81-F1-model_v4 Acyl-CoA desaturase 0.9879 6 360 GO:0006629
GO:0016020
GO:0016717
AF-A0A7Y5R7D8-F1-model_v4 Acyl-CoA desaturase 0.987 49 360 GO:0006629
GO:0016020
GO:0016717
AF-A0A2M8FRX0-F1-model_v4 Acyl-CoA desaturase 0.9853 1 360 GO:0006629
GO:0016020
GO:0016717
AF-A0A239H4N9-F1-model_v4 Linoleoyl-CoA desaturase 0.9833 1 359 GO:0006629
GO:0016020
GO:0016717

Feature Viewer

pLDDT pTM Quality
93.19 0.9 High
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Predicted Structure (AlphaFold2)

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