F142329

General Info

Members Datasets Scaffolds Average Seq Length
129 83 258 338

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10000061|Ga0265327_10000061115
Length 401
Sequence VSTADRVFITGASGFIGGRLAERLLAAGRRVRMLARRPLPALEKLGAEIVPGDLHDLAALRHGCEGAGTVFHVAGRVGVWGSVDDFFRVNVGGTQNVIAACRAAGVARLVYTSSPSVVYSGGNLAGVDESAPLCTAAPCAYPTSKAAAERAVTAAHGPALATIALRPHLVWGPGDQNVVPRMLALADKGRLRIVGSGRNLVDCTHIANVVDAHLLAEAALIVGGGGPALSRSKGPSPREVGATGHPSNDAFSGEPSPGQVPGRTVGPAPPSTNGPHGTSHLISDKFGAAKNPGGRAYFITNGEPVVLWDWVNELLNGLGRPTVTRHISLGAAYRVGGLLEAAWRILPLQGEPPMTRFVAKELATDHWFKIDAARRDLGYAPRVTMAAGTAELIAHYRAGHQ

Samples

Sample ID Description Type Environment
1 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
15 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
20 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
21 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
22 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
23 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
24 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
25 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
26 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
27 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
28 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
29 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
30 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
31 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
32 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
33 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
34 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
35 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
36 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
37 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
38 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
39 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
40 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
41 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
42 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
43 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
44 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
45 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
46 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
47 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
48 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
49 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
50 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
51 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
54 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
57 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
58 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
59 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
69 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
70 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
71 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
72 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
73 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
74 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
75 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
76 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
77 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
78 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
79 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
80 2891562705 Microbispora tritici MT50 Isolate Unclassified
81 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
82 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
83 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.25
Metatranscriptomes 0.78
Isolates 6.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.1
Nodule 0
Rhizoplane 0
Rhizosphere 76.74
Stem 0
Stem Tuber 0
Unclassified 4.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265327_10000061 3300031251 Bacteria 234364
2 rootH1_10147513 3300003316 Bacteria 2815
3 rootH2_10019238 3300003320 Bacteria 23588
4 rootL2_10082280 3300003322 Bacteria 3244
5 rootL2_10106274 3300003322 Bacteria 8465
6 Ga0055536_1001729 3300003781 Bacteria 12917
7 Ga0070680_100402801 3300005336 Bacteria 1166
8 Ga0070671_100223752 3300005355 Bacteria 1596
9 Ga0070707_100000956 3300005468 Bacteria 28663
10 Ga0070693_100009859 3300005547 Bacteria 4765
11 Ga0068855_100519945 3300005563 Bacteria 1291
12 Ga0075367_10046839 3300006178 Bacteria 2542
13 Ga0075428_100023626 3300006844 Bacteria 6805
14 Ga0075428_100199146 3300006844 Bacteria 2166
15 Ga0075431_100017579 3300006847 Bacteria 7270
16 Ga0075436_100000935 3300006914 Bacteria 19495
17 Ga0075435_100000626 3300007076 Bacteria 21667
18 Ga0111539_10090270 3300009094 Bacteria 3600
19 Ga0207661_10112627 3300025944 Bacteria 2304
20 Ga0207667_10481468 3300025949 Bacteria 1260
21 Ga0207428_10074969 3300027907 Bacteria 2652
22 Ga0265319_1000361 3300028563 Bacteria 32836
23 Ga0265319_1002191 3300028563 Bacteria 10883
24 Ga0265319_1005486 3300028563 Bacteria 6067
25 Ga0265319_1027106 3300028563 Bacteria 2036
26 Ga0265334_10009886 3300028573 Bacteria 4032
27 Ga0265318_10000032 3300028577 Bacteria 143847
28 Ga0265318_10002462 3300028577 Bacteria 9893
29 Ga0265318_10003517 3300028577 Bacteria 7850
30 Ga0307515_10097758 3300028794 Bacteria 3584
31 Ga0265338_10008989 3300028800 Bacteria 12016
32 Ga0265338_10177796 3300028800 Bacteria 1625
33 Ga0265324_10011791 3300029957 Unclassified 3319
34 Ga0265760_10017931 3300031090 Bacteria 2034
35 Ga0265328_10058075 3300031239 Unclassified 1421
36 Ga0265320_10010871 3300031240 Bacteria 5388
37 Ga0265320_10017231 3300031240 Bacteria 4017
38 Ga0265325_10117507 3300031241 Bacteria 1286
39 Ga0265331_10006174 3300031250 Bacteria 7115
40 Ga0265331_10056489 3300031250 Bacteria 1864
41 Ga0265327_10000066 3300031251 Bacteria 221705
42 Ga0265327_10010599 3300031251 Bacteria 6455
43 Ga0265316_10006576 3300031344 Bacteria 11090
44 Ga0265316_10162763 3300031344 Bacteria 1668
45 Ga0265313_10005394 3300031595 Bacteria 9431
46 Ga0265313_10010897 3300031595 Bacteria 5702
47 Ga0265313_10021590 3300031595 Bacteria 3518
48 Ga0307508_10000091 3300031616 Bacteria 105896
49 Ga0265314_10001061 3300031711 Bacteria 31946
50 Ga0265314_10002380 3300031711 Bacteria 19347
51 Ga0265314_10187482 3300031711 Bacteria 1233
52 Ga0316576_10005631 3300031727 Bacteria 7690
53 Ga0316576_10124164 3300031727 Bacteria 1939
54 Ga0316578_10031935 3300031728 Unclassified 3004
55 Ga0307414_10057503 3300032004 Bacteria 2734
56 Ga0316582_0015327 3300036647 Bacteria 4379
57 Ga0316582_0048700 3300036647 Unclassified 2680
58 Ga0316584_0112764 3300036712 Bacteria 2034
59 Ga0395905_0052143 3300037471 Bacteria 3831
60 Ga0400484_15921 3300038725 Bacteria 9741
61 Ga0400490_00196 3300038726 Bacteria 7990
62 Ga0400490_57999 3300038726 Bacteria 8049
63 Ga0400491_26049 3300038727 Bacteria 5592
64 Ga0400485_03034 3300038735 Bacteria 16655
65 Ga0400488_09421 3300038741 Bacteria 22497
66 Ga0400488_30275 3300038741 Bacteria 1216
67 Ga0400486_06356 3300038742 Bacteria 3885
68 Ga0400486_19159 3300038742 Bacteria 70148
69 Ga0400483_019585 3300039062 Bacteria 1911
70 Ga0400483_257903 3300039062 Bacteria 41939
71 Ga0400489_88070 3300039093 Bacteria 26174
72 Ga0400489_93457 3300039093 Bacteria 6441
73 Ga0400487_28618 3300039110 Bacteria 2739
74 Ga0451577_0000017 3300042876 Bacteria 523453
75 Ga0451577_0004605 3300042876 Bacteria 14488
76 Ga0453683_0000292 3300044673 Bacteria 64078
77 Ga0466963_0021685 3300044694 Bacteria 4056
78 Ga0453684_0000794 3300044712 Bacteria 108265
79 Ga0453684_0002340 3300044712 Bacteria 46360
80 Ga0453684_0002785 3300044712 Bacteria 41355
81 Ga0453684_0003404 3300044712 Bacteria 35936
82 Ga0453684_0035996 3300044712 Bacteria 6830
83 Ga0451576_0000051 3300045051 Bacteria 313453
84 Ga0451576_0001112 3300045051 Bacteria 49013
85 Ga0451576_0001398 3300045051 Bacteria 41476
86 Ga0451576_0035853 3300045051 Bacteria 5260
87 Ga0451576_0148051 3300045051 Bacteria 2448
88 Ga0451576_0154283 3300045051 Bacteria 2395
89 Ga0466967_0137444 3300045976 Bacteria 2273
90 Ga0495656_0047245 3300046615 Bacteria 1825
91 Ga0495668_0041494 3300046616 Bacteria 2563
92 Ga0495677_0083607 3300047445 Bacteria 1198
93 Ga0501031_0259769 3300049568 Bacteria 1129
94 Ga0501034_0000311 3300049571 Bacteria 86241
95 Ga0501034_0003767 3300049571 Bacteria 17124
96 Ga0501034_0007910 3300049571 Bacteria 11296
97 Ga0501034_0084981 3300049571 Bacteria 3166
98 Ga0501034_0100965 3300049571 Bacteria 2879
99 Ga0501036_0077740 3300049572 Bacteria 2808
100 Ga0501037_0028558 3300049573 Bacteria 4120
101 Ga0501037_0073711 3300049573 Bacteria 2482
102 Ga0501043_0161303 3300049579 Bacteria 1752
103 Ga0501043_0185033 3300049579 Unclassified 1622
104 Ga0501046_0004788 3300049580 Bacteria 12200
105 Ga0501046_0053632 3300049580 Bacteria 3174
106 Ga0501047_0032771 3300049581 Bacteria 5015
107 Ga0501047_0044078 3300049581 Bacteria 4308
108 Ga0501047_0122013 3300049581 Unclassified 2488
109 Ga0501047_0173533 3300049581 Bacteria 2024
110 Ga0501048_0077874 3300049582 Bacteria 2340
111 Ga0501035_0003462 3300049822 Bacteria 15108
112 Ga0501035_0030459 3300049822 Bacteria 4918
113 Ga0501044_0000134 3300049823 Bacteria 90500
114 Ga0501044_0376713 3300049823 Bacteria 1335
115 nmdc:mga06r32_13950_c1 3300050510 Bacteria 7290
116 nmdc:mga08y16_72065_c1 3300050511 Bacteria 3600
117 nmdc:mga0rr50_2421_c1 3300050513 Bacteria 10509
118 nmdc:mga08x19_822_c1 3300050514 Bacteria 19735
119 Ga0500568_0005889 3300053139 Bacteria 6243
120 Ga0500622_0057747 3300053156 Bacteria 1984
121 2525557511 2524614729 Bacteria 3091755
122 2630649102 2627854209 Bacteria 3093011
123 2856745705 2856741275 Bacteria 8096094
124 2884700895 2884693830 Bacteria 11273186
125 2891397138 2891395885 Bacteria 9251614
126 2891569503 2891562705 Bacteria 8039471
127 2895452388 2895442618 Bacteria 11027144
128 2919499054 2919497567 Bacteria 4408621
129 2923516592 2923516293 Bacteria 3716336
130 Ga0265327_10000061
131 rootH1_10147513
132 rootH2_10019238
133 rootL2_10082280
134 rootL2_10106274
135 Ga0055536_1001729
136 Ga0070680_100402801
137 Ga0070671_100223752
138 Ga0070707_100000956
139 Ga0070693_100009859
140 Ga0068855_100519945
141 Ga0075367_10046839
142 Ga0075428_100023626
143 Ga0075428_100199146
144 Ga0075431_100017579
145 Ga0075436_100000935
146 Ga0075435_100000626
147 Ga0111539_10090270
148 Ga0207661_10112627
149 Ga0207667_10481468
150 Ga0207428_10074969
151 Ga0265319_1000361
152 Ga0265319_1002191
153 Ga0265319_1005486
154 Ga0265319_1027106
155 Ga0265334_10009886
156 Ga0265318_10000032
157 Ga0265318_10002462
158 Ga0265318_10003517
159 Ga0307515_10097758
160 Ga0265338_10008989
161 Ga0265338_10177796
162 Ga0265324_10011791
163 Ga0265760_10017931
164 Ga0265328_10058075
165 Ga0265320_10010871
166 Ga0265320_10017231
167 Ga0265325_10117507
168 Ga0265331_10006174
169 Ga0265331_10056489
170 Ga0265327_10000066
171 Ga0265327_10010599
172 Ga0265316_10006576
173 Ga0265316_10162763
174 Ga0265313_10005394
175 Ga0265313_10010897
176 Ga0265313_10021590
177 Ga0307508_10000091
178 Ga0265314_10001061
179 Ga0265314_10002380
180 Ga0265314_10187482
181 Ga0316576_10005631
182 Ga0316576_10124164
183 Ga0316578_10031935
184 Ga0307414_10057503
185 Ga0316582_0015327
186 Ga0316582_0048700
187 Ga0316584_0112764
188 Ga0395905_0052143
189 Ga0400484_15921
190 Ga0400490_00196
191 Ga0400490_57999
192 Ga0400491_26049
193 Ga0400485_03034
194 Ga0400488_09421
195 Ga0400488_30275
196 Ga0400486_06356
197 Ga0400486_19159
198 Ga0400483_019585
199 Ga0400483_257903
200 Ga0400489_88070
201 Ga0400489_93457
202 Ga0400487_28618
203 Ga0451577_0000017
204 Ga0451577_0004605
205 Ga0453683_0000292
206 Ga0466963_0021685
207 Ga0453684_0000794
208 Ga0453684_0002340
209 Ga0453684_0002785
210 Ga0453684_0003404
211 Ga0453684_0035996
212 Ga0451576_0000051
213 Ga0451576_0001112
214 Ga0451576_0001398
215 Ga0451576_0035853
216 Ga0451576_0148051
217 Ga0451576_0154283
218 Ga0466967_0137444
219 Ga0495656_0047245
220 Ga0495668_0041494
221 Ga0495677_0083607
222 Ga0501031_0259769
223 Ga0501034_0000311
224 Ga0501034_0003767
225 Ga0501034_0007910
226 Ga0501034_0084981
227 Ga0501034_0100965
228 Ga0501036_0077740
229 Ga0501037_0028558
230 Ga0501037_0073711
231 Ga0501043_0161303
232 Ga0501043_0185033
233 Ga0501046_0004788
234 Ga0501046_0053632
235 Ga0501047_0032771
236 Ga0501047_0044078
237 Ga0501047_0122013
238 Ga0501047_0173533
239 Ga0501048_0077874
240 Ga0501035_0003462
241 Ga0501035_0030459
242 Ga0501044_0000134
243 Ga0501044_0376713
244 nmdc:mga06r32_13950_c1
245 nmdc:mga08y16_72065_c1
246 nmdc:mga0rr50_2421_c1
247 nmdc:mga08x19_822_c1
248 Ga0500568_0005889
249 Ga0500622_0057747
250 2525557511
251 2630649102
252 2856745705
253 2884700895
254 2891397138
255 2891569503
256 2895452388
257 2919499054
258 2923516592

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

8

230

0.95

PF05368

NmrA

NmrA-like family

7

127

0.91

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

7

224

0.87

PF04321

RmlD_sub_bind

RmlD substrate binding domain

5

199

0.83

PF07993

NAD_binding_4

Male sterility protein

55

211

0.83

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

8

219

0.82

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

7

131

0.78

PF13460

NAD_binding_10

NAD(P)H-binding

11

169

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3m2p-assembly1.cif.gz_B the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8732 4 329
6rfq-assembly1.cif.gz_E cryo-em structure of a respiratory complex i assembly intermediate with ndufaf2 0.8685 5 247
3m2p-assembly1.cif.gz_B the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8669 4 329
3m2p-assembly2.cif.gz_F the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8661 4 329
3m2p-assembly3.cif.gz_D the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8626 4 329
ID Description Score Start End Superfamily
af_Q54TU9_1_334_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9431 4 331 3.40.50.720
af_P75821_1_335_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9382 6 330 3.40.50.720
af_Q6ZHP8_7_375_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9362 1 333 3.40.50.720
af_A4HSS6_18_376_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9355 4 330 3.40.50.720
af_P9WQP7_5_351_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9354 5 330 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A081C706-F1-model_v4 3-beta hydroxysteroid dehydrogenase/isomerase 0.9842 6 328 GO:0006694
GO:0016616
GO:0016853
AF-A0A1C3EH03-F1-model_v4 3-beta hydroxysteroid dehydrogenase 0.9833 4 328 GO:0006694
GO:0016616
AF-A0A2E5JZI1-F1-model_v4 3-beta hydroxysteroid dehydrogenase 0.9829 6 330 GO:0006694
GO:0016616
AF-A0A1H1N999-F1-model_v4 Nucleoside-diphosphate-sugar epimerase 0.9828 1 333 GO:0006694
GO:0016616
AF-A0A1F9E7S7-F1-model_v4 3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein 0.9823 6 330 GO:0006694
GO:0016616

Map