F140657

General Info

Members Datasets Scaffolds Average Seq Length
129 100 258 150

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100731911|Ga0070660_1007319111
Length 161
Sequence VLLAIGVVLRQDDLMTDQLAPFAEVAAQDHGLCVLSMLRANGSVVAAVVNAGVLPHPVTGEPAVGLVARGLRKLEHLRADPRATIVARSGWRWAAVEGSVDIFGPDDPHLEIDAETLRLVLRNVFTAAGGTHDDWDTYDRTLAEQRSAAVMITPIRTYPEA

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
27 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
40 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
41 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
42 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
43 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
44 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
45 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
46 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
47 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
53 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
58 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
59 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
60 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
61 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
66 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
73 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
74 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
75 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
79 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
80 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
81 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
82 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
83 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
84 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
87 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
88 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
94 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
95 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
96 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
97 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
98 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
99 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
100 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.35
Metatranscriptomes 1.55
Isolates 3.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.43
Nodule 0
Rhizoplane 0
Rhizosphere 89.92
Stem 0
Stem Tuber 0
Unclassified 6.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100731911 3300005339 Bacteria 830
2 JGI25406J46586_10023197 3300003203 Bacteria 2456
3 JGI25407J50210_10000029 3300003373 Bacteria 15001
4 Ga0070690_100126213 3300005330 Bacteria 1723
5 Ga0068868_101692515 3300005338 Bacteria 596
6 Ga0070673_100200994 3300005364 Bacteria 1716
7 Ga0070714_100000190 3300005435 Bacteria 49579
8 Ga0070713_100040829 3300005436 Bacteria 3775
9 Ga0070708_100800501 3300005445 Bacteria 886
10 Ga0070707_100051328 3300005468 Bacteria 3955
11 Ga0070699_100549341 3300005518 Bacteria 1051
12 Ga0070679_100082969 3300005530 Bacteria 3194
13 Ga0081538_10001284 3300005981 Bacteria 26093
14 Ga0081539_10000214 3300005985 Bacteria 135110
15 Ga0081539_10012654 3300005985 Bacteria 6468
16 Ga0070717_10056120 3300006028 Bacteria 3253
17 Ga0075365_10176628 3300006038 Unclassified 1492
18 Ga0075365_10704984 3300006038 Bacteria 713
19 Ga0075364_10526421 3300006051 Bacteria 808
20 Ga0070712_100333082 3300006175 Bacteria 1237
21 Ga0075428_100009732 3300006844 Bacteria 10679
22 Ga0075430_100038182 3300006846 Bacteria 4069
23 Ga0075430_100052234 3300006846 Bacteria 3442
24 Ga0075431_100077854 3300006847 Bacteria 3422
25 Ga0075431_100762740 3300006847 Bacteria 942
26 Ga0075429_100005127 3300006880 Bacteria 11265
27 Ga0075429_100258054 3300006880 Bacteria 1526
28 Ga0111539_10361288 3300009094 Bacteria 1690
29 Ga0114129_10047251 3300009147 Bacteria 6049
30 Ga0157369_10751334 3300013105 Bacteria 1003
31 Ga0157376_10653749 3300014969 Unclassified 1052
32 Ga0206354_10615194 3300020081 Unclassified 1504
33 Ga0206353_12017295 3300020082 Bacteria 1819
34 Ga0213875_10001967 3300021388 Bacteria 12711
35 Ga0213875_10007696 3300021388 Bacteria 5548
36 Ga0207707_10050267 3300025912 Bacteria 3632
37 Ga0207663_11649913 3300025916 Unclassified 516
38 Ga0207657_10676445 3300025919 Bacteria 802
39 Ga0207652_10015564 3300025921 Bacteria 6188
40 Ga0207646_10013615 3300025922 Bacteria 7767
41 Ga0207700_10152493 3300025928 Bacteria 1911
42 Ga0207664_10000209 3300025929 Bacteria 44400
43 Ga0207661_10504080 3300025944 Bacteria 1106
44 Ga0265327_10000185 3300031251 Bacteria 131884
45 Ga0265327_10017527 3300031251 Bacteria 4486
46 Ga0265327_10278845 3300031251 Bacteria 739
47 Ga0307408_100508447 3300031548 Bacteria 1056
48 Ga0307405_10275827 3300031731 Bacteria 1263
49 Ga0307405_11117003 3300031731 Bacteria 678
50 Ga0307413_10075279 3300031824 Bacteria 2142
51 Ga0307410_10042954 3300031852 Bacteria 2992
52 Ga0307406_10027063 3300031901 Bacteria 3451
53 Ga0307406_10450842 3300031901 Bacteria 1032
54 Ga0307409_101352455 3300031995 Bacteria 738
55 Ga0307411_10099605 3300032005 Bacteria 2052
56 Ga0307415_100097266 3300032126 Bacteria 2148
57 Ga0307415_100559257 3300032126 Bacteria 1011
58 Ga0307415_100672335 3300032126 Bacteria 931
59 Ga0373960_0079461 3300035121 Bacteria 1030
60 Ga0395900_0605601 3300037418 Bacteria 1036
61 Ga0395898_0471402 3300037466 Unclassified 1195
62 Ga0395905_0026718 3300037471 Bacteria 5443
63 Ga0436364_0076048 3300037853 Bacteria 13813
64 Ga0436364_0679099 3300037853 Bacteria 8495
65 Ga0451853_3907021 3300041512 Bacteria 659
66 Ga0466969_0256314 3300044656 Bacteria 793
67 Ga0466966_0423061 3300044684 Unclassified 801
68 Ga0466961_0127993 3300044693 Bacteria 1592
69 Ga0466963_0028921 3300044694 Bacteria 3563
70 Ga0466963_0565231 3300044694 Unclassified 803
71 Ga0466964_0809932 3300044706 Bacteria 530
72 Ga0466971_0012004 3300044719 Bacteria 3796
73 Ga0466970_0483799 3300044765 Bacteria 712
74 Ga0466957_0638664 3300044842 Bacteria 748
75 Ga0466960_0003138 3300044901 Bacteria 6337
76 Ga0466959_0577718 3300045049 Bacteria 757
77 Ga0466958_0001924 3300045836 Bacteria 10166
78 Ga0466967_0080154 3300045976 Bacteria 2945
79 Ga0495641_0422651 3300046461 Bacteria 605
80 Ga0501031_0313731 3300049568 Bacteria 1016
81 Ga0501033_0001885 3300049570 Bacteria 18251
82 Ga0501037_0413762 3300049573 Bacteria 923
83 Ga0501041_0363588 3300049577 Bacteria 915
84 Ga0501047_0201716 3300049581 Bacteria 1850
85 Ga0501047_0958414 3300049581 Bacteria 669
86 Ga0501048_0181671 3300049582 Bacteria 1491
87 Ga0501067_0652817 3300049583 Bacteria 591
88 Ga0501068_0386175 3300049584 Bacteria 902
89 Ga0501069_0015360 3300049585 Bacteria 4103
90 Ga0501069_0082354 3300049585 Bacteria 1813
91 Ga0501069_0404301 3300049585 Bacteria 808
92 Ga0501070_0038346 3300049586 Bacteria 3997
93 Ga0501070_0105848 3300049586 Bacteria 2325
94 Ga0501071_0434639 3300049587 Bacteria 1004
95 Ga0501072_0098377 3300049588 Bacteria 2326
96 Ga0501073_0998229 3300049589 Bacteria 576
97 Ga0501073_1156838 3300049589 Bacteria 531
98 Ga0501074_0048507 3300049590 Bacteria 3068
99 Ga0501075_0377808 3300049591 Bacteria 1080
100 Ga0501076_0025059 3300049592 Bacteria 4614
101 Ga0501077_0098255 3300049593 Bacteria 1856
102 Ga0501079_0266229 3300049741 Bacteria 1340
103 Ga0501080_0051957 3300049742 Bacteria 3814
104 Ga0501080_1092431 3300049742 Bacteria 689
105 Ga0501044_0001424 3300049823 Bacteria 28064
106 Ga0501044_0009851 3300049823 Bacteria 10387
107 Ga0501044_0816162 3300049823 Bacteria 811
108 Ga0501045_0960550 3300049824 Bacteria 627
109 nmdc:mga00v17_27083_c1 3300050491 Bacteria 1766
110 nmdc:mga00v17_638156_c1 3300050491 Bacteria 685
111 nmdc:mga0yw44_125015_c1 3300050492 Unclassified 1660
112 nmdc:mga0yw44_580816_c1 3300050492 Bacteria 761
113 nmdc:mga05p37_6004_c1 3300050507 Bacteria 14293
114 nmdc:mga09592_19231_c1 3300050508 Bacteria 5606
115 nmdc:mga09592_246534_c1 3300050508 Bacteria 1548
116 nmdc:mga0qj67_13505_c1 3300050509 Bacteria 6160
117 nmdc:mga0qj67_8771_c1 3300050509 Bacteria 7505
118 nmdc:mga06r32_2850_c1 3300050510 Bacteria 15516
119 nmdc:mga06r32_714667_c1 3300050510 Bacteria 967
120 Ga0501084_0137346 3300054114 Bacteria 2058
121 Ga0501084_0210949 3300054114 Bacteria 1639
122 Ga0501082_0059656 3300060353 Bacteria 3288
123 Ga0501082_0644487 3300060353 Bacteria 927
124 Ga0466962_0016420 3300061719 Bacteria 3571
125 Ga0530510_1402653 3300061734 Bacteria 536
126 2558907269 2558860112 Bacteria 9931328
127 2676478103 2675903058 Bacteria 6822861
128 2791912829 2791354901 Bacteria 8322202
129 2827629432 2827628540 Bacteria 6858585
130 Ga0070660_100731911
131 JGI25406J46586_10023197
132 JGI25407J50210_10000029
133 Ga0070690_100126213
134 Ga0068868_101692515
135 Ga0070673_100200994
136 Ga0070714_100000190
137 Ga0070713_100040829
138 Ga0070708_100800501
139 Ga0070707_100051328
140 Ga0070699_100549341
141 Ga0070679_100082969
142 Ga0081538_10001284
143 Ga0081539_10000214
144 Ga0081539_10012654
145 Ga0070717_10056120
146 Ga0075365_10176628
147 Ga0075365_10704984
148 Ga0075364_10526421
149 Ga0070712_100333082
150 Ga0075428_100009732
151 Ga0075430_100038182
152 Ga0075430_100052234
153 Ga0075431_100077854
154 Ga0075431_100762740
155 Ga0075429_100005127
156 Ga0075429_100258054
157 Ga0111539_10361288
158 Ga0114129_10047251
159 Ga0157369_10751334
160 Ga0157376_10653749
161 Ga0206354_10615194
162 Ga0206353_12017295
163 Ga0213875_10001967
164 Ga0213875_10007696
165 Ga0207707_10050267
166 Ga0207663_11649913
167 Ga0207657_10676445
168 Ga0207652_10015564
169 Ga0207646_10013615
170 Ga0207700_10152493
171 Ga0207664_10000209
172 Ga0207661_10504080
173 Ga0265327_10000185
174 Ga0265327_10017527
175 Ga0265327_10278845
176 Ga0307408_100508447
177 Ga0307405_10275827
178 Ga0307405_11117003
179 Ga0307413_10075279
180 Ga0307410_10042954
181 Ga0307406_10027063
182 Ga0307406_10450842
183 Ga0307409_101352455
184 Ga0307411_10099605
185 Ga0307415_100097266
186 Ga0307415_100559257
187 Ga0307415_100672335
188 Ga0373960_0079461
189 Ga0395900_0605601
190 Ga0395898_0471402
191 Ga0395905_0026718
192 Ga0436364_0076048
193 Ga0436364_0679099
194 Ga0451853_3907021
195 Ga0466969_0256314
196 Ga0466966_0423061
197 Ga0466961_0127993
198 Ga0466963_0028921
199 Ga0466963_0565231
200 Ga0466964_0809932
201 Ga0466971_0012004
202 Ga0466970_0483799
203 Ga0466957_0638664
204 Ga0466960_0003138
205 Ga0466959_0577718
206 Ga0466958_0001924
207 Ga0466967_0080154
208 Ga0495641_0422651
209 Ga0501031_0313731
210 Ga0501033_0001885
211 Ga0501037_0413762
212 Ga0501041_0363588
213 Ga0501047_0201716
214 Ga0501047_0958414
215 Ga0501048_0181671
216 Ga0501067_0652817
217 Ga0501068_0386175
218 Ga0501069_0015360
219 Ga0501069_0082354
220 Ga0501069_0404301
221 Ga0501070_0038346
222 Ga0501070_0105848
223 Ga0501071_0434639
224 Ga0501072_0098377
225 Ga0501073_0998229
226 Ga0501073_1156838
227 Ga0501074_0048507
228 Ga0501075_0377808
229 Ga0501076_0025059
230 Ga0501077_0098255
231 Ga0501079_0266229
232 Ga0501080_0051957
233 Ga0501080_1092431
234 Ga0501044_0001424
235 Ga0501044_0009851
236 Ga0501044_0816162
237 Ga0501045_0960550
238 nmdc:mga00v17_27083_c1
239 nmdc:mga00v17_638156_c1
240 nmdc:mga0yw44_125015_c1
241 nmdc:mga0yw44_580816_c1
242 nmdc:mga05p37_6004_c1
243 nmdc:mga09592_19231_c1
244 nmdc:mga09592_246534_c1
245 nmdc:mga0qj67_13505_c1
246 nmdc:mga0qj67_8771_c1
247 nmdc:mga06r32_2850_c1
248 nmdc:mga06r32_714667_c1
249 Ga0501084_0137346
250 Ga0501084_0210949
251 Ga0501082_0059656
252 Ga0501082_0644487
253 Ga0466962_0016420
254 Ga0530510_1402653
255 2558907269
256 2676478103
257 2791912829
258 2827629432

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ymh-assembly1.cif.gz_AAA x-ray structure of the k72i, y129f, r133l, h199a quadruple mutant of pnp-oxidase from e. coli in complex with plp 0.8569 16 87
2d5m-assembly1.cif.gz_A-2 flavoredoxin of desulfovibrio vulgaris (miyazaki f) 0.8332 17 71
1eje-assembly1.cif.gz_A-2 crystal structure of an fmn-binding protein 0.828 16 71
1wv4-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form 0.8128 16 141
2i02-assembly1.cif.gz_B crystal structure of a pyridoxamine 5'-phosphate oxidase-like family protein (npun_r6570) from nostoc punctiforme pcc 73102 at 1.80 a resolution 0.7658 4 143
ID Description Score Start End Superfamily
af_O07754_2_147_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9399 1 145 2.30.110.10
af_O07754_2_147_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9274 1 145 2.30.110.10
2d5mA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8332 17 71 2.30.110.10
1ejeA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.828 16 71 2.30.110.10
af_Q9UTQ4_42_231_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7853 16 71 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A1X2BFE9-F1-model_v4 deleted 0.9975 20 146
AF-A0A7J9Z6Y7-F1-model_v4 TIGR03618 family F420-dependent PPOX class oxidoreductase 0.9944 1 147 GO:0005829
GO:0016627
GO:0070967
AF-A0A6N9YAV1-F1-model_v4 deleted 0.9931 3 107
AF-A0A7R7YQW9-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.9905 1 146 GO:0005829
GO:0016627
GO:0070967
AF-A0A7J9Z6Y7-F1-model_v4 TIGR03618 family F420-dependent PPOX class oxidoreductase 0.9877 1 147 GO:0005829
GO:0016627
GO:0070967

Map