F137486

General Info

Members Datasets Scaffolds Average Seq Length
128 96 127 507

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10041153|Ga0070717_100411532
Length 558
Sequence VKRLFRGLRRPPDAAYDAVVIGSGIGGLIAANLLARDGARVLLVEQHYMVGGYCSTFRRGGYTFDAATHFYPLLGNPETLTGRLLVELGVETQWVKMDPVDTFHFPDGTRFDVPAAFDAYLALLESLFPHEAAALAAFFGEVRQANLLGLLRYFRGREAPGLAPYAELTVRQALDRHFRDRKLKLLLTADCPHWGSPPGRTSFVFDSMLRLSYFLGNYYPRGGSQAFADELARCLEERGGHVLMSTAARRILVEGGERGRACGVELETLRGPVRALSASPGAPELGRGAGRFRVRCDAVVSNADLLHTWEALVPPEHVPPGYVAGLRRLRPTYPCYLMHLGLTGVQPETIEMLQGYHWHDWDPDQAAAGAVDFKLFAPTQYEPAMAPPGGHVLIVQKIVDMDYAAAEANDGWPCHKQAVDSFVLARLERLLPGIGARIAVRSSASARTSWRFTLNHQGAMLGWEMSPEQVGEGRPDLASPLDGLYTVGHWTRPGGGITPVIVSAQRAAKLASGARAVAGAGAAAEVVTIRPRGGREAGAGSNEAWKAEAPAREAGISF

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
73 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
74 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
75 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
76 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
84 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
85 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
94 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
95 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
96 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.12
Rhizosphere 96.09
Stem 0
Stem Tuber 0
Unclassified 0.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10169497 3300003316 Bacteria 2028
2 Ga0065714_10064441 3300005288 Bacteria 101256
3 Ga0065712_10000007 3300005290 Bacteria 101903
4 Ga0065715_10088957 3300005293 Bacteria 20489
5 Ga0065707_10107975 3300005295 Bacteria 2529
6 Ga0070658_10006290 3300005327 Bacteria 9618
7 Ga0070658_10025184 3300005327 Bacteria 4769
8 Ga0070658_10059692 3300005327 Bacteria 3106
9 Ga0070658_10109148 3300005327 Bacteria 2291
10 Ga0070676_10023144 3300005328 Unclassified 3490
11 Ga0070690_100093339 3300005330 Bacteria 1985
12 Ga0070670_100010340 3300005331 Bacteria 7963
13 Ga0068869_100011742 3300005334 Bacteria 5759
14 Ga0070680_100092104 3300005336 Bacteria 2510
15 Ga0070660_100034295 3300005339 Bacteria 3833
16 Ga0070692_10017380 3300005345 Bacteria 3438
17 Ga0070669_100000120 3300005353 Bacteria 72772
18 Ga0070673_100045971 3300005364 Bacteria 3389
19 Ga0070709_10000109 3300005434 Bacteria 57356
20 Ga0070709_10002176 3300005434 Bacteria 10612
21 Ga0070713_100063442 3300005436 Bacteria 3098
22 Ga0070711_100009762 3300005439 Bacteria 5918
23 Ga0070694_100000223 3300005444 Bacteria 29783
24 Ga0070694_100009281 3300005444 Bacteria 6037
25 Ga0070694_100020928 3300005444 Bacteria 4175
26 Ga0070681_10012578 3300005458 Bacteria 8398
27 Ga0070707_100029192 3300005468 Bacteria 5251
28 Ga0070699_100047951 3300005518 Bacteria 3696
29 Ga0070679_100040376 3300005530 Bacteria 4643
30 Ga0070665_100000292 3300005548 Bacteria 79257
31 Ga0068855_100020216 3300005563 Bacteria 7994
32 Ga0068857_100010625 3300005577 Bacteria 8004
33 Ga0068856_100029239 3300005614 Bacteria 5383
34 Ga0070702_100001314 3300005615 Bacteria 10080
35 Ga0068859_100000346 3300005617 Bacteria 46204
36 Ga0068859_100022675 3300005617 Bacteria 6295
37 Ga0068859_100203123 3300005617 Bacteria 2066
38 Ga0068858_100078544 3300005842 Bacteria 3067
39 Ga0068860_100002100 3300005843 Bacteria 21003
40 Ga0068862_100003501 3300005844 Bacteria 13481
41 Ga0081538_10041647 3300005981 Bacteria 2911
42 Ga0070717_10015871 3300006028 Bacteria 5826
43 Ga0070717_10041153 3300006028 Bacteria 3767
44 Ga0070716_100092364 3300006173 Bacteria 1835
45 Ga0068871_100035449 3300006358 Bacteria 3965
46 Ga0075428_100071611 3300006844 Unclassified 3789
47 Ga0075431_100000684 3300006847 Bacteria 29076
48 Ga0075431_100021354 3300006847 Bacteria 6620
49 Ga0075433_10131817 3300006852 Unclassified 2220
50 Ga0075434_100009670 3300006871 Bacteria 9008
51 Ga0075434_100018573 3300006871 Bacteria 6719
52 Ga0075429_100035719 3300006880 Bacteria 4323
53 Ga0075429_100108973 3300006880 Bacteria 2421
54 Ga0075429_100153051 3300006880 Unclassified 2019
55 Ga0075436_100000006 3300006914 Bacteria 306066
56 Ga0075436_100002211 3300006914 Bacteria 13437
57 Ga0097620_100000346 3300006931 Bacteria 46204
58 Ga0097620_100022673 3300006931 Bacteria 6295
59 Ga0097620_100203134 3300006931 Bacteria 2066
60 Ga0075435_100001197 3300007076 Bacteria 16582
61 Ga0099794_10005438 3300007265 Bacteria 5106
62 Ga0105240_10120574 3300009093 Bacteria 3158
63 Ga0111539_10000358 3300009094 Bacteria 56148
64 Ga0111539_10014348 3300009094 Bacteria 9892
65 Ga0114129_10024375 3300009147 Bacteria 8573
66 Ga0114129_10033567 3300009147 Bacteria 7252
67 Ga0114129_10095669 3300009147 Unclassified 4113
68 Ga0114129_10250834 3300009147 Bacteria 2376
69 Ga0114129_10290319 3300009147 Bacteria 2183
70 Ga0105248_10014566 3300009177 Bacteria 8656
71 Ga0157371_10071127 3300013102 Bacteria 2463
72 Ga0157380_10007289 3300014326 Bacteria 7849
73 Ga0157377_10011398 3300014745 Unclassified 4436
74 Ga0207710_10051992 3300025900 Bacteria 1841
75 Ga0207699_10000099 3300025906 Bacteria 62157
76 Ga0207645_10019328 3300025907 Unclassified 4467
77 Ga0207705_10072174 3300025909 Bacteria 2503
78 Ga0207705_10134000 3300025909 Bacteria 1845
79 Ga0207657_10023446 3300025919 Bacteria 5745
80 Ga0207652_10016819 3300025921 Bacteria 5977
81 Ga0207681_10000101 3300025923 Bacteria 72788
82 Ga0207694_10082449 3300025924 Bacteria 2528
83 Ga0207650_10005940 3300025925 Bacteria 8333
84 Ga0207659_10000266 3300025926 Bacteria 31850
85 Ga0207665_10019077 3300025939 Bacteria 4506
86 Ga0207665_10093842 3300025939 Bacteria 2084
87 Ga0207711_10013707 3300025941 Bacteria 6731
88 Ga0207667_10099910 3300025949 Bacteria 2993
89 Ga0207651_10077567 3300025960 Bacteria 2379
90 Ga0207702_10085206 3300026078 Bacteria 2753
91 Ga0207702_10169345 3300026078 Unclassified 2001
92 Ga0207674_10007372 3300026116 Bacteria 12811
93 Ga0207428_10004106 3300027907 Bacteria 13951
94 Ga0268266_10001452 3300028379 Bacteria 28189
95 Ga0268265_10000115 3300028380 Bacteria 100719
96 Ga0373926_0025354 3300035083 Bacteria 2069
97 Ga0373956_0039340 3300035119 Bacteria 2096
98 Ga0373961_0000144 3300035241 Bacteria 34810
99 Ga0373935_0001020 3300035692 Bacteria 15238
100 Ga0373927_0156108 3300035695 Bacteria 1495
101 Ga0373937_0041123 3300036401 Bacteria 4217
102 Ga0373925_0003923 3300037068 Bacteria 11352
103 Ga0395905_0005319 3300037471 Bacteria 13160
104 Ga0451807_2019280 3300041486 Bacteria 3133
105 Ga0453684_0091281 3300044712 Bacteria 3760
106 Ga0496108_0111780 3300048911 Bacteria 2337
107 Ga0496112_0028409 3300048915 Bacteria 5399
108 Ga0496114_0000028 3300048917 Bacteria 177603
109 Ga0501041_0044045 3300049577 Bacteria 2713
110 Ga0501075_0077662 3300049591 Bacteria 2512
111 Ga0501076_0047118 3300049592 Bacteria 3407
112 Ga0501249_005218 3300049679 Unclassified 2654
113 Ga0501080_0148825 3300049742 Bacteria 2165
114 nmdc:mga05p37_208911_c1 3300050507 Unclassified 2361
115 nmdc:mga05p37_2795_c1 3300050507 Bacteria 20288
116 nmdc:mga05p37_28062_c1 3300050507 Bacteria 6859
117 nmdc:mga09592_105110_c1 3300050508 Bacteria 2420
118 nmdc:mga09592_21642_c1 3300050508 Bacteria 5300
119 nmdc:mga08y16_6750_c1 3300050511 Bacteria 12038
120 nmdc:mga0n895_158465_c1 3300050512 Bacteria 2295
121 nmdc:mga0n895_208553_c1 3300050512 Bacteria 1985
122 nmdc:mga0n895_295891_c1 3300050512 Bacteria 1641
123 nmdc:mga0rr50_222_c2 3300050513 Bacteria 25633
124 nmdc:mga08x19_28202_c1 3300050514 Bacteria 3515
125 nmdc:mga08x19_43_c1 3300050514 Bacteria 148391
126 nmdc:mga08x19_98285_c1 3300050514 Bacteria 1939
127 nmdc:mga0a205_12354_c1 3300050515 Bacteria 7898

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035119 Ga0373956_0039340 Ga0373956_0039340_841_2085 410
2 3300035695 Ga0373927_0156108 Ga0373927_0156108_10_1254 410
3 3300050507 nmdc:mga05p37_208911_c1 nmdc:mga05p37_208911_c1_45_1370 429
4 3300006847 Ga0075431_100021354 Ga0075431_1000213544 463
5 3300005327 Ga0070658_10059692 Ga0070658_100596923 468
6 3300005336 Ga0070680_100092104 Ga0070680_1000921042 468
7 3300005458 Ga0070681_10012578 Ga0070681_100125787 468
8 3300025909 Ga0207705_10072174 Ga0207705_100721742 468
9 3300025921 Ga0207652_10016819 Ga0207652_100168194 468
10 3300006852 Ga0075433_10131817 Ga0075433_101318172 472
11 3300009147 Ga0114129_10033567 Ga0114129_100335673 472
12 3300050507 nmdc:mga05p37_2795_c1 nmdc:mga05p37_2795_c1_4259_5677 472
13 3300050513 nmdc:mga0rr50_222_c2 nmdc:mga0rr50_222_c2_7201_8730 486
14 3300050514 nmdc:mga08x19_43_c1 nmdc:mga08x19_43_c1_132328_133857 486
15 3300005327 Ga0070658_10025184 Ga0070658_100251844 490
16 3300005339 Ga0070660_100034295 Ga0070660_1000342953 490
17 3300005530 Ga0070679_100040376 Ga0070679_1000403763 490
18 3300005563 Ga0068855_100020216 Ga0068855_1000202166 490
19 3300006880 Ga0075429_100035719 Ga0075429_1000357194 490
20 3300009147 Ga0114129_10024375 Ga0114129_100243753 490
21 3300025919 Ga0207657_10023446 Ga0207657_100234464 490
22 3300025949 Ga0207667_10099910 Ga0207667_100999103 490
23 3300026078 Ga0207702_10085206 Ga0207702_100852062 490
24 3300050507 nmdc:mga05p37_28062_c1 nmdc:mga05p37_28062_c1_4965_6437 490
25 3300050508 nmdc:mga09592_21642_c1 nmdc:mga09592_21642_c1_1442_2992 490
26 3300041486 Ga0451807_2019280 Ga0451807_2019280_407_1972 491
27 3300005334 Ga0068869_100011742 Ga0068869_1000117424 492
28 3300005615 Ga0070702_100001314 Ga0070702_10000131410 492
29 3300005617 Ga0068859_100022675 Ga0068859_1000226754 492
30 3300005842 Ga0068858_100078544 Ga0068858_1000785442 492
31 3300006358 Ga0068871_100035449 Ga0068871_1000354492 492
32 3300006931 Ga0097620_100022673 Ga0097620_1000226733 492
33 3300013102 Ga0157371_10071127 Ga0157371_100711272 492
34 3300014745 Ga0157377_10011398 Ga0157377_100113983 492
35 3300025926 Ga0207659_10000266 Ga0207659_1000026613 492
36 3300049577 Ga0501041_0044045 Ga0501041_0044045_696_2177 492
37 3300049591 Ga0501075_0077662 Ga0501075_0077662_861_2342 492
38 3300049592 Ga0501076_0047118 Ga0501076_0047118_31_1512 492
39 3300049742 Ga0501080_0148825 Ga0501080_0148825_181_1662 492
40 3300009147 Ga0114129_10095669 Ga0114129_100956692 493
41 3300005353 Ga0070669_100000120 Ga0070669_10000012024 495
42 3300005843 Ga0068860_100002100 Ga0068860_10000210013 495
43 3300025923 Ga0207681_10000101 Ga0207681_1000010125 495
44 3300035083 Ga0373926_0025354 Ga0373926_0025354_498_1985 495
45 3300037068 Ga0373925_0003923 Ga0373925_0003923_2866_4353 495
46 3300005444 Ga0070694_100020928 Ga0070694_1000209282 496
47 3300005548 Ga0070665_100000292 Ga0070665_10000029255 496
48 3300028379 Ga0268266_10001452 Ga0268266_1000145213 496
49 3300035692 Ga0373935_0001020 Ga0373935_0001020_12414_14018 496
50 3300005328 Ga0070676_10023144 Ga0070676_100231442 497
51 3300005345 Ga0070692_10017380 Ga0070692_100173802 497
52 3300005444 Ga0070694_100009281 Ga0070694_1000092815 497
53 3300009147 Ga0114129_10290319 Ga0114129_102903192 497
54 3300025907 Ga0207645_10019328 Ga0207645_100193283 497
55 3300025924 Ga0207694_10082449 Ga0207694_100824492 497
56 3300005288 Ga0065714_10064441 Ga0065714_1006444168 498
57 3300005290 Ga0065712_10000007 Ga0065712_1000000765 498
58 3300005293 Ga0065715_10088957 Ga0065715_100889577 498
59 3300005331 Ga0070670_100010340 Ga0070670_1000103407 498
60 3300005577 Ga0068857_100010625 Ga0068857_1000106253 498
61 3300009093 Ga0105240_10120574 Ga0105240_101205742 498
62 3300009094 Ga0111539_10014348 Ga0111539_100143487 498
63 3300025925 Ga0207650_10005940 Ga0207650_100059406 498
64 3300026116 Ga0207674_10007372 Ga0207674_100073723 498
65 3300048915 Ga0496112_0028409 Ga0496112_0028409_3843_5363 498
66 3300049679 Ga0501249_005218 Ga0501249_005218_626_2131 498
67 3300005327 Ga0070658_10006290 Ga0070658_100062903 500
68 3300005330 Ga0070690_100093339 Ga0070690_1000933392 500
69 3300014326 Ga0157380_10007289 Ga0157380_100072897 500
70 3300025909 Ga0207705_10134000 Ga0207705_101340002 500
71 3300048911 Ga0496108_0111780 Ga0496108_0111780_122_1654 500
72 3300005617 Ga0068859_100203123 Ga0068859_1002031232 501
73 3300006931 Ga0097620_100203134 Ga0097620_1002031342 501
74 3300009177 Ga0105248_10014566 Ga0105248_100145662 501
75 3300025900 Ga0207710_10051992 Ga0207710_100519922 501
76 3300025939 Ga0207665_10019077 Ga0207665_100190772 501
77 3300025941 Ga0207711_10013707 Ga0207711_100137075 501
78 3300005439 Ga0070711_100009762 Ga0070711_1000097624 502
79 3300005844 Ga0068862_100003501 Ga0068862_1000035018 502
80 3300006847 Ga0075431_100000684 Ga0075431_10000068412 502
81 3300006880 Ga0075429_100108973 Ga0075429_1001089732 502
82 3300009147 Ga0114129_10250834 Ga0114129_102508342 502
83 3300028380 Ga0268265_10000115 Ga0268265_100001157 502
84 3300044712 Ga0453684_0091281 Ga0453684_0091281_1655_3232 502
85 3300050508 nmdc:mga09592_105110_c1 nmdc:mga09592_105110_c1_406_2016 502
86 3300005295 Ga0065707_10107975 Ga0065707_101079752 503
87 3300005327 Ga0070658_10109148 Ga0070658_101091482 503
88 3300005444 Ga0070694_100000223 Ga0070694_10000022314 503
89 3300005617 Ga0068859_100000346 Ga0068859_10000034619 503
90 3300006931 Ga0097620_100000346 Ga0097620_10000034619 503
91 3300009094 Ga0111539_10000358 Ga0111539_1000035837 503
92 3300027907 Ga0207428_10004106 Ga0207428_100041066 503
93 3300050511 nmdc:mga08y16_6750_c1 nmdc:mga08y16_6750_c1_3817_5400 503
94 3300050512 nmdc:mga0n895_295891_c1 nmdc:mga0n895_295891_c1_20_1582 503
95 3300050514 nmdc:mga08x19_28202_c1 nmdc:mga08x19_28202_c1_1442_3001 503
96 3300006914 Ga0075436_100000006 Ga0075436_10000000617 504
97 3300007076 Ga0075435_100001197 Ga0075435_1000011977 504
98 3300007265 Ga0099794_10005438 Ga0099794_100054383 504
99 3300037471 Ga0395905_0005319 Ga0395905_0005319_3488_5134 504
100 3300048917 Ga0496114_0000028 Ga0496114_0000028_53544_55082 504
101 3300005436 Ga0070713_100063442 Ga0070713_1000634422 505
102 3300005518 Ga0070699_100047951 Ga0070699_1000479512 505
103 3300006028 Ga0070717_10015871 Ga0070717_100158712 505
104 3300050512 nmdc:mga0n895_208553_c1 nmdc:mga0n895_208553_c1_193_1725 505
105 3300005468 Ga0070707_100029192 Ga0070707_1000291922 506
106 3300005614 Ga0068856_100029239 Ga0068856_1000292392 506
107 3300006844 Ga0075428_100071611 Ga0075428_1000716112 506
108 3300026078 Ga0207702_10169345 Ga0207702_101693452 506
109 3300036401 Ga0373937_0041123 Ga0373937_0041123_2352_3884 506
110 3300005434 Ga0070709_10002176 Ga0070709_100021767 507
111 3300025906 Ga0207699_10000099 Ga0207699_100000993 507
112 3300005364 Ga0070673_100045971 Ga0070673_1000459712 508
113 3300005434 Ga0070709_10000109 Ga0070709_100001094 508
114 3300005981 Ga0081538_10041647 Ga0081538_100416472 508
115 3300006173 Ga0070716_100092364 Ga0070716_1000923641 508
116 3300006880 Ga0075429_100153051 Ga0075429_1001530512 508
117 3300025906 Ga0207699_10000099 Ga0207699_1000009912 508
118 3300025939 Ga0207665_10093842 Ga0207665_100938422 508
119 3300025960 Ga0207651_10077567 Ga0207651_100775672 508
120 3300035241 Ga0373961_0000144 Ga0373961_0000144_3275_4843 508
121 3300050514 nmdc:mga08x19_98285_c1 nmdc:mga08x19_98285_c1_218_1759 508
122 3300006028 Ga0070717_10041153 Ga0070717_100411532 509
123 3300006871 Ga0075434_100009670 Ga0075434_1000096708 509
124 3300006914 Ga0075436_100002211 Ga0075436_10000221113 509
125 3300050512 nmdc:mga0n895_158465_c1 nmdc:mga0n895_158465_c1_327_1871 509
126 3300050515 nmdc:mga0a205_12354_c1 nmdc:mga0a205_12354_c1_6086_7630 509
127 3300003316 rootH1_10169497 rootH1_101694972 510
128 3300006871 Ga0075434_100018573 Ga0075434_1000185732 510

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

17

69

0.94

PF12831

FAD_oxidored

FAD dependent oxidoreductase

17

88

0.93

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

20

88

0.91

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

25

511

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3g5r-assembly1.cif.gz_A crystal structure of thermus thermophilus trmfo in complex with tetrahydrofolate 0.9697 18 48
5a9r-assembly1.cif.gz_A apo form of imine reductase from amycolatopsis orientalis 0.9621 18 46
8a3x-assembly1.cif.gz_B imine reductase from ensifer adhaerens in complex with nadp+ 0.9568 17 44
5ocm-assembly1.cif.gz_A imine reductase from streptosporangium roseum in complex with nadp+ and 2,2,2-trifluoroacetophenone hydrate 0.9474 16 48
6eod-assembly1.cif.gz_H structure of reductive aminase from aspergillus terreus in complex with nadph 0.9395 16 44
ID Description Score Start End Superfamily
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.001 18 45 3.50.50.60
af_Q5AMP2_2_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9878 18 44 3.40.50.720
3fg2P02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9856 18 50 3.50.50.60
1sezB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9825 18 51 3.50.50.60
af_I6XF25_1_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9825 18 48 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1F2TEG9-F1-model_v4 Amine oxidase domain-containing protein 0.9824 3 492 GO:0016491
AF-A0A1F2TEG9-F1-model_v4 Amine oxidase domain-containing protein 0.9725 3 492 GO:0016491
AF-A0A2E9QU10-F1-model_v4 Amine oxidase domain-containing protein 0.9272 10 495 GO:0016020
GO:0016116
GO:0016491
AF-A0A521H0X9-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9245 12 495 GO:0016020
GO:0016116
GO:0016491
AF-A0A2N2HMI2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9212 13 495 GO:0016491

Feature Viewer

pLDDT pTM Quality
90.52 0.89 High
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Predicted Structure (AlphaFold2)

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