F137171

General Info

Members Datasets Scaffolds Average Seq Length
128 89 256 375

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10315337|Ga0070681_103153371
Length 422
Sequence MLLVRVRSRLGRCNDLRPACLREPGWLASAVMRPAETRGAPYTRTVDGSPADHGIDESALADLIARGQREIDEGHIPSFQLAFARDGKLAVWLTVGAAEPGSRYVIFSSTKPVVASAVWILIGEGAIDVSRRVAELVPEFDSFGKDVITIEEVLLHTSGFPRAPFAALDWDDREKRLERFRTWRTNWEPGTRFEYHPTSAHWVLAELIERATGGDFRDFVRSRVIEPLGLTGLQVGVPPAEQGDVNDLVATGSPATPDELEAVLGIRELPLTEVTTDALLTFNHPDVRAVGVPGGGGISTAADLALFYQALLHNPLGQWKPEVLADATATVRNTFPDYLGTPANRTRGLVVKGDDEGSGLRGMGRVVGPRSFGHNGAAGQLAWADPDTGVSFCFLTNGIDEHEIRQWRRAAALANRAGACVR

Samples

Sample ID Description Type Environment
1 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
6 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
7 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
8 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
20 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
21 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
30 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
31 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
32 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
33 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
34 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
35 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
36 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
37 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
38 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
39 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
40 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
41 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
42 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
47 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
48 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
49 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
50 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
51 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
52 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
53 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
54 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
55 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
56 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
57 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
58 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
59 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
60 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
61 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
62 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
66 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
67 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
68 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
69 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
70 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
73 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
74 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
77 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
78 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
79 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
82 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
83 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
84 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
85 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
86 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
87 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
88 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
89 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.31
Nodule 0
Rhizoplane 5.47
Rhizosphere 66.41
Stem 0
Stem Tuber 0
Unclassified 8.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070681_10315337 3300005458 Bacteria 1473
2 Ga0070709_10088773 3300005434 Bacteria 2034
3 Ga0070708_100031041 3300005445 Bacteria 4623
4 Ga0070706_100054128 3300005467 Bacteria 3704
5 Ga0070693_100036594 3300005547 Bacteria 2730
6 Ga0068856_100132171 3300005614 Bacteria 2501
7 Ga0068858_100126940 3300005842 Bacteria 2389
8 Ga0068860_100211988 3300005843 Bacteria 1879
9 Ga0075365_10000497 3300006038 Bacteria 14962
10 Ga0075365_10005604 3300006038 Bacteria 6791
11 Ga0075365_10017899 3300006038 Bacteria 4348
12 Ga0075365_10138030 3300006038 Bacteria 1691
13 Ga0075363_100031365 3300006048 Bacteria 2756
14 Ga0075363_100033330 3300006048 Bacteria 2681
15 Ga0075363_100059711 3300006048 Bacteria 2051
16 Ga0075363_100097927 3300006048 Bacteria 1621
17 Ga0075364_10021797 3300006051 Bacteria 4039
18 Ga0075364_10101865 3300006051 Bacteria 1912
19 Ga0075362_10023991 3300006177 Bacteria 2585
20 Ga0075362_10060703 3300006177 Unclassified 1709
21 Ga0075367_10005921 3300006178 Bacteria 6131
22 Ga0075367_10018429 3300006178 Bacteria 3852
23 Ga0075430_100049153 3300006846 Bacteria 3560
24 Ga0075433_10060503 3300006852 Bacteria 3316
25 Ga0075429_100056592 3300006880 Unclassified 3413
26 Ga0075429_100314846 3300006880 Bacteria 1370
27 Ga0105245_10004977 3300009098 Bacteria 11683
28 Ga0105245_10012433 3300009098 Bacteria 7408
29 Ga0105245_10315352 3300009098 Bacteria 1539
30 Ga0105242_10007810 3300009176 Bacteria 8232
31 Ga0163162_10006929 3300013306 Bacteria 10987
32 Ga0213876_10002273 3300021384 Bacteria 11333
33 Ga0207684_10251402 3300025910 Unclassified 1525
34 Ga0207646_10121348 3300025922 Bacteria 2348
35 Ga0207687_10020808 3300025927 Bacteria 4353
36 Ga0207700_10034110 3300025928 Bacteria 3650
37 Ga0207686_10099713 3300025934 Unclassified 1937
38 Ga0207658_10156325 3300025986 Unclassified 1864
39 Ga0207683_10102196 3300026121 Bacteria 2559
40 Ga0268264_10200830 3300028381 Bacteria 1824
41 Ga0265338_10000073 3300028800 Bacteria 181521
42 Ga0265332_10010520 3300031238 Bacteria 4119
43 Ga0265325_10001073 3300031241 Bacteria 19703
44 Ga0265331_10013883 3300031250 Bacteria 4310
45 Ga0265327_10024849 3300031251 Bacteria 3507
46 Ga0265327_10079677 3300031251 Unclassified 1621
47 Ga0265316_10067618 3300031344 Bacteria 2763
48 Ga0265313_10000614 3300031595 Bacteria 36958
49 Ga0265314_10000921 3300031711 Bacteria 34645
50 Ga0307412_10073260 3300031911 Bacteria 2343
51 Ga0307412_10083114 3300031911 Bacteria 2219
52 Ga0307416_100128502 3300032002 Bacteria 2275
53 Ga0307414_10111025 3300032004 Bacteria 2087
54 Ga0307411_10037012 3300032005 Bacteria 3064
55 Ga0373925_0191802 3300037068 Bacteria 1622
56 Ga0400483_000816 3300039062 Bacteria 7981
57 Ga0400483_084204 3300039062 Bacteria 3075
58 Ga0400483_150298 3300039062 Bacteria 12006
59 Ga0436365_0971328 3300039437 Bacteria 4154
60 Ga0436365_1109861 3300039437 Bacteria 7513
61 Ga0436365_1407567 3300039437 Bacteria 17189
62 Ga0436365_1525660 3300039437 Bacteria 4433
63 Ga0436362_1155119 3300039453 Bacteria 7490
64 Ga0451853_0804955 3300041512 Bacteria 1223
65 Ga0466967_0083470 3300045976 Unclassified 2889
66 Ga0466967_0482993 3300045976 Bacteria 1214
67 Ga0495628_0174483 3300046516 Bacteria 1629
68 Ga0495630_0061138 3300046517 Unclassified 2829
69 Ga0495634_0019465 3300046642 Bacteria 4823
70 Ga0495659_0056827 3300046664 Bacteria 1437
71 Ga0495657_0195204 3300046675 Bacteria 1236
72 Ga0495613_0003096 3300046689 Bacteria 12439
73 Ga0495624_0046835 3300046690 Unclassified 2749
74 Ga0495672_0001308 3300047320 Bacteria 24800
75 Ga0496104_0125922 3300048907 Bacteria 2460
76 Ga0496109_0339851 3300048912 Bacteria 1418
77 Ga0496110_0014383 3300048913 Bacteria 6570
78 Ga0496111_0022386 3300048914 Bacteria 4424
79 Ga0496112_0003317 3300048915 Bacteria 13285
80 Ga0496112_0008423 3300048915 Bacteria 9233
81 Ga0496113_0052339 3300048916 Bacteria 3049
82 Ga0496126_0000040 3300048929 Bacteria 345144
83 Ga0501033_0000295 3300049570 Bacteria 47954
84 Ga0501033_0001672 3300049570 Bacteria 19390
85 Ga0501034_0000312 3300049571 Bacteria 86122
86 Ga0501037_0039677 3300049573 Bacteria 3466
87 Ga0501067_0085734 3300049583 Bacteria 1748
88 Ga0501068_0000438 3300049584 Bacteria 21136
89 Ga0501068_0004036 3300049584 Bacteria 7983
90 Ga0501069_0000034 3300049585 Bacteria 92080
91 Ga0501069_0002886 3300049585 Bacteria 8823
92 Ga0501070_0000013 3300049586 Bacteria 180554
93 Ga0501070_0005828 3300049586 Bacteria 10507
94 Ga0501071_0002733 3300049587 Bacteria 10816
95 Ga0501071_0015227 3300049587 Bacteria 5277
96 Ga0501071_0113106 3300049587 Bacteria 2008
97 Ga0501072_0015429 3300049588 Bacteria 5856
98 Ga0501072_0039519 3300049588 Bacteria 3704
99 Ga0501072_0090249 3300049588 Bacteria 2433
100 Ga0501073_0002209 3300049589 Bacteria 14543
101 Ga0501073_0006709 3300049589 Bacteria 8570
102 Ga0501074_0029648 3300049590 Bacteria 3964
103 Ga0501074_0038858 3300049590 Bacteria 3447
104 Ga0501080_0003343 3300049742 Bacteria 14164
105 Ga0501080_0065052 3300049742 Bacteria 3392
106 Ga0501083_0003374 3300049744 Bacteria 11178
107 Ga0501044_0004370 3300049823 Bacteria 15819
108 nmdc:mga03683_17310_c1 3300050489 Bacteria 2727
109 nmdc:mga03n38_76272_c1 3300050490 Bacteria 1564
110 nmdc:mga00v17_1010_c1 3300050491 Bacteria 15071
111 nmdc:mga00v17_10812_c1 3300050491 Bacteria 5001
112 nmdc:mga00v17_197115_c1 3300050491 Bacteria 1301
113 nmdc:mga0yw44_199287_c1 3300050492 Bacteria 1322
114 nmdc:mga0yw44_5013_c1 3300050492 Bacteria 6187
115 nmdc:mga0yw44_632_c1 3300050492 Bacteria 12800
116 nmdc:mga0yw44_9739_c1 3300050492 Bacteria 4879
117 nmdc:mga09592_40914_c1 3300050508 Unclassified 3895
118 nmdc:mga0qj67_42372_c1 3300050509 Bacteria 3583
119 nmdc:mga0n895_344908_c1 3300050512 Bacteria 1508
120 nmdc:mga0rr50_67901_c1 3300050513 Bacteria 2710
121 nmdc:mga08x19_35294_c1 3300050514 Unclassified 3163
122 nmdc:mga0a205_21229_c1 3300050515 Bacteria 6141
123 nmdc:mga0a205_305770_c1 3300050515 Bacteria 1462
124 Ga0500566_0000216 3300053094 Bacteria 30613
125 Ga0500568_0000023 3300053139 Bacteria 176763
126 Ga0500616_0020379 3300053153 Bacteria 3725
127 Ga0501084_0027643 3300054114 Bacteria 4740
128 Ga0501084_0217191 3300054114 Bacteria 1613
129 Ga0070681_10315337
130 Ga0070709_10088773
131 Ga0070708_100031041
132 Ga0070706_100054128
133 Ga0070693_100036594
134 Ga0068856_100132171
135 Ga0068858_100126940
136 Ga0068860_100211988
137 Ga0075365_10000497
138 Ga0075365_10005604
139 Ga0075365_10017899
140 Ga0075365_10138030
141 Ga0075363_100031365
142 Ga0075363_100033330
143 Ga0075363_100059711
144 Ga0075363_100097927
145 Ga0075364_10021797
146 Ga0075364_10101865
147 Ga0075362_10023991
148 Ga0075362_10060703
149 Ga0075367_10005921
150 Ga0075367_10018429
151 Ga0075430_100049153
152 Ga0075433_10060503
153 Ga0075429_100056592
154 Ga0075429_100314846
155 Ga0105245_10004977
156 Ga0105245_10012433
157 Ga0105245_10315352
158 Ga0105242_10007810
159 Ga0163162_10006929
160 Ga0213876_10002273
161 Ga0207684_10251402
162 Ga0207646_10121348
163 Ga0207687_10020808
164 Ga0207700_10034110
165 Ga0207686_10099713
166 Ga0207658_10156325
167 Ga0207683_10102196
168 Ga0268264_10200830
169 Ga0265338_10000073
170 Ga0265332_10010520
171 Ga0265325_10001073
172 Ga0265331_10013883
173 Ga0265327_10024849
174 Ga0265327_10079677
175 Ga0265316_10067618
176 Ga0265313_10000614
177 Ga0265314_10000921
178 Ga0307412_10073260
179 Ga0307412_10083114
180 Ga0307416_100128502
181 Ga0307414_10111025
182 Ga0307411_10037012
183 Ga0373925_0191802
184 Ga0400483_000816
185 Ga0400483_084204
186 Ga0400483_150298
187 Ga0436365_0971328
188 Ga0436365_1109861
189 Ga0436365_1407567
190 Ga0436365_1525660
191 Ga0436362_1155119
192 Ga0451853_0804955
193 Ga0466967_0083470
194 Ga0466967_0482993
195 Ga0495628_0174483
196 Ga0495630_0061138
197 Ga0495634_0019465
198 Ga0495659_0056827
199 Ga0495657_0195204
200 Ga0495613_0003096
201 Ga0495624_0046835
202 Ga0495672_0001308
203 Ga0496104_0125922
204 Ga0496109_0339851
205 Ga0496110_0014383
206 Ga0496111_0022386
207 Ga0496112_0003317
208 Ga0496112_0008423
209 Ga0496113_0052339
210 Ga0496126_0000040
211 Ga0501033_0000295
212 Ga0501033_0001672
213 Ga0501034_0000312
214 Ga0501037_0039677
215 Ga0501067_0085734
216 Ga0501068_0000438
217 Ga0501068_0004036
218 Ga0501069_0000034
219 Ga0501069_0002886
220 Ga0501070_0000013
221 Ga0501070_0005828
222 Ga0501071_0002733
223 Ga0501071_0015227
224 Ga0501071_0113106
225 Ga0501072_0015429
226 Ga0501072_0039519
227 Ga0501072_0090249
228 Ga0501073_0002209
229 Ga0501073_0006709
230 Ga0501074_0029648
231 Ga0501074_0038858
232 Ga0501080_0003343
233 Ga0501080_0065052
234 Ga0501083_0003374
235 Ga0501044_0004370
236 nmdc:mga03683_17310_c1
237 nmdc:mga03n38_76272_c1
238 nmdc:mga00v17_1010_c1
239 nmdc:mga00v17_10812_c1
240 nmdc:mga00v17_197115_c1
241 nmdc:mga0yw44_199287_c1
242 nmdc:mga0yw44_5013_c1
243 nmdc:mga0yw44_632_c1
244 nmdc:mga0yw44_9739_c1
245 nmdc:mga09592_40914_c1
246 nmdc:mga0qj67_42372_c1
247 nmdc:mga0n895_344908_c1
248 nmdc:mga0rr50_67901_c1
249 nmdc:mga08x19_35294_c1
250 nmdc:mga0a205_21229_c1
251 nmdc:mga0a205_305770_c1
252 Ga0500566_0000216
253 Ga0500568_0000023
254 Ga0500616_0020379
255 Ga0501084_0027643
256 Ga0501084_0217191

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00144

Beta-lactamase

Beta-lactamase

60

416

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i7j-assembly2.cif.gz_B crystal structure of a beta-lactamase (mb2281c) from mycobacterium bovis, northeast structural genomics consortium target mbr246 0.8381 31 377
3i7j-assembly2.cif.gz_B crystal structure of a beta-lactamase (mb2281c) from mycobacterium bovis, northeast structural genomics consortium target mbr246 0.807 31 377
7y3z-assembly2.cif.gz_A structure of a novel carboxylesterase feh from acinetobacter sp. dl-2 0.7976 17 379
3zyt-assembly1.cif.gz_A structure determination of esta from arthrobacter nitroguajacolicus rue61a 0.7893 18 385
4e6x-assembly1.cif.gz_A clbp in complex boron-based inhibitor 0.7864 26 360
ID Description Score Start End Superfamily
af_P72041_31_410_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8675 22 385 3.40.710.10
af_P72041_31_410_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8304 22 385 3.40.710.10
3i7jB00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8303 31 377 3.40.710.10
af_I1M9W9_472_764_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8267 18 277 3.40.710.10
af_Q21569_36_429_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8204 17 382 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A6N7FIU0-F1-model_v4 Serine hydrolase 0.9841 18 386 GO:0016787
AF-A0A6L6BYW0-F1-model_v4 Serine hydrolase 0.9793 84 385 GO:0016787
AF-A0A7X6NZP2-F1-model_v4 Beta-lactamase family protein 0.9773 211 381
AF-A0A6J6D1R0-F1-model_v4 Unannotated protein 0.967 287 383
AF-A0A6B0YAY3-F1-model_v4 deleted 0.9667 9 276

Map