F129954

General Info

Members Datasets Scaffolds Average Seq Length
126 59 126 339

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10006806|Ga0081539_100068065
Length 352
Sequence VHDPAHSTRDARSGPAANDPADREILIAGLGSAGRRHLANLRALGWQRIRLYRTQSSTLPDDDLASFPVEHDLETALARQPLAVIVANPSALHLPVALAAARVGSHLLIEKPLAHELAGIPELECEVDARGLTVLVGFQFRFNPGLRQIKRWIDNGAIGTVVSAQVHWGEYLPGMHPWEDYRLGYAARSDLGGGALLTFCHPFDYLRWLLGDVELVSAIEAGHNPFGLSVDSCVEVIVRFASGASGHVHLNFVQQPHDHRLTIVGTEGTIAWTHDDHAARRYCASAKRWEMVPPPAGFERNRMFLDEMRHFLACIRGDERPLCTLDDGREALRLALTARCSMEENVMAAPAT

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
27 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
32 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
33 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
34 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
35 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
36 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
37 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
38 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
39 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
40 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
41 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
42 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
43 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
44 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
45 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
46 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
47 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
48 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
49 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
50 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
51 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
52 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
53 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
54 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
55 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
56 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
57 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
58 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
59 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1590914 2162886007 Bacteria 6064
2 JGI25406J46586_10000166 3300003203 Bacteria 29209
3 JGI25406J46586_10003482 3300003203 Bacteria 7395
4 Ga0065704_10071051 3300005289 Bacteria 13492
5 Ga0065704_10094225 3300005289 Bacteria 2554
6 Ga0065704_10094541 3300005289 Unclassified 2538
7 Ga0065707_10005994 3300005295 Bacteria 4728
8 Ga0065707_10013431 3300005295 Bacteria 2634
9 Ga0065707_10081753 3300005295 Bacteria 50128
10 Ga0065707_10082619 3300005295 Bacteria 13262
11 Ga0065707_10102522 3300005295 Unclassified 2800
12 Ga0065707_10115928 3300005295 Unclassified 2251
13 Ga0065707_10136748 3300005295 Bacteria 1830
14 Ga0070700_100229078 3300005441 Unclassified 1321
15 Ga0070694_100035368 3300005444 Unclassified 3302
16 Ga0070707_100476122 3300005468 Unclassified 1210
17 Ga0070698_100056914 3300005471 Bacteria 3958
18 Ga0070698_100097568 3300005471 Bacteria 2915
19 Ga0070698_100104212 3300005471 Bacteria 2806
20 Ga0070698_100117176 3300005471 Bacteria 2626
21 Ga0070698_100132605 3300005471 Bacteria 2446
22 Ga0070699_100000285 3300005518 Bacteria 48435
23 Ga0070699_100012273 3300005518 Bacteria 7390
24 Ga0070665_100002568 3300005548 Bacteria 19904
25 Ga0070704_100093951 3300005549 Bacteria 2243
26 Ga0068859_100047114 3300005617 Bacteria 4330
27 Ga0068864_100044803 3300005618 Bacteria 3793
28 Ga0068862_100008613 3300005844 Bacteria 8439
29 Ga0068862_100142398 3300005844 Bacteria 2129
30 Ga0081539_10000351 3300005985 Bacteria 101228
31 Ga0081539_10001365 3300005985 Bacteria 42287
32 Ga0081539_10006806 3300005985 Bacteria 10711
33 Ga0075428_100165845 3300006844 Unclassified 2396
34 Ga0075430_100074481 3300006846 Unclassified 2847
35 Ga0075431_100300850 3300006847 Unclassified 1621
36 Ga0075433_10110905 3300006852 Bacteria 2434
37 Ga0075429_100013409 3300006880 Bacteria 7108
38 Ga0075429_100079793 3300006880 Bacteria 2852
39 Ga0075429_100125797 3300006880 Bacteria 2241
40 Ga0075429_100390186 3300006880 Unclassified 1219
41 Ga0097620_100047112 3300006931 Bacteria 4330
42 Ga0114129_10001438 3300009147 Bacteria 32142
43 Ga0114129_10003769 3300009147 Bacteria 21376
44 Ga0114129_10290929 3300009147 Bacteria 2180
45 Ga0114129_10416214 3300009147 Bacteria 1769
46 Ga0105246_10021959 3300011119 Bacteria 4114
47 Ga0105246_10118868 3300011119 Bacteria 1955
48 Ga0163162_10280929 3300013306 Bacteria 1797
49 Ga0163163_10061571 3300014325 Unclassified 3718
50 Ga0157379_10061425 3300014968 Bacteria 3360
51 Ga0207708_10047430 3300026075 Bacteria 3270
52 Ga0207674_10151049 3300026116 Bacteria 2280
53 Ga0268266_10007075 3300028379 Bacteria 10187
54 Ga0268265_10004727 3300028380 Bacteria 9397
55 Ga0268265_10349191 3300028380 Bacteria 1350
56 Ga0265327_10052639 3300031251 Bacteria 2118
57 Ga0316579_10000574 3300031691 Bacteria 12287
58 Ga0316579_10003510 3300031691 Bacteria 6130
59 Ga0316578_10120935 3300031728 Unclassified 1574
60 Ga0316577_10002062 3300031733 Bacteria 9812
61 Ga0316577_10099012 3300031733 Unclassified 1633
62 Ga0307410_10232884 3300031852 Unclassified 1423
63 Ga0307407_10071768 3300031903 Unclassified 2063
64 Ga0307407_10072486 3300031903 Bacteria 2054
65 Ga0307416_100359515 3300032002 Bacteria 1477
66 Ga0307416_100616035 3300032002 Bacteria 1167
67 Ga0316574_0015271 3300035398 Unclassified 4454
68 Ga0316582_0000903 3300036647 Bacteria 12184
69 Ga0316582_0035582 3300036647 Bacteria 3076
70 Ga0316582_0039868 3300036647 Unclassified 2927
71 Ga0316584_0021514 3300036712 Unclassified 4688
72 Ga0316584_0058274 3300036712 Unclassified 2892
73 Ga0316584_0107328 3300036712 Bacteria 2089
74 Ga0451577_0001664 3300042876 Bacteria 28712
75 Ga0451577_0015235 3300042876 Bacteria 7154
76 Ga0451577_0204441 3300042876 Bacteria 1783
77 Ga0451577_0440270 3300042876 Unclassified 1183
78 Ga0453683_0041966 3300044673 Bacteria 2873
79 Ga0453683_0276337 3300044673 Unclassified 1072
80 Ga0453684_0000012 3300044712 Bacteria 1062512
81 Ga0453684_0000873 3300044712 Bacteria 101078
82 Ga0453684_0001230 3300044712 Bacteria 78346
83 Ga0453684_0001297 3300044712 Bacteria 74305
84 Ga0453684_0002464 3300044712 Bacteria 44834
85 Ga0453684_0004574 3300044712 Bacteria 28877
86 Ga0453684_0006880 3300044712 Bacteria 21349
87 Ga0453684_0039036 3300044712 Bacteria 6476
88 Ga0453684_0042778 3300044712 Bacteria 6100
89 Ga0453684_0054342 3300044712 Bacteria 5217
90 Ga0453684_0060442 3300044712 Unclassified 4873
91 Ga0453684_0070199 3300044712 Bacteria 4437
92 Ga0453684_0087367 3300044712 Bacteria 3864
93 Ga0453684_0141852 3300044712 Unclassified 2867
94 Ga0453684_0160868 3300044712 Unclassified 2656
95 Ga0453684_0203574 3300044712 Unclassified 2305
96 Ga0453684_0247405 3300044712 Bacteria 2049
97 Ga0453684_0278783 3300044712 Bacteria 1907
98 Ga0451576_0017771 3300045051 Bacteria 7814
99 Ga0451576_0047300 3300045051 Unclassified 4524
100 Ga0451576_0050882 3300045051 Unclassified 4344
101 Ga0451576_0141311 3300045051 Archaea 2510
102 Ga0451576_0146523 3300045051 Unclassified 2462
103 Ga0451576_0172835 3300045051 Unclassified 2255
104 Ga0451576_0399460 3300045051 Bacteria 1441
105 Ga0501034_0162795 3300049571 Bacteria 2201
106 Ga0501046_0016189 3300049580 Bacteria 6250
107 Ga0501047_0073732 3300049581 Bacteria 3286
108 Ga0501048_0014832 3300049582 Bacteria 5763
109 Ga0501070_0001172 3300049586 Bacteria 23440
110 Ga0501072_0108498 3300049588 Bacteria 2209
111 Ga0501073_0015807 3300049589 Bacteria 5469
112 Ga0501073_0026823 3300049589 Bacteria 4125
113 Ga0501073_0026919 3300049589 Bacteria 4117
114 Ga0501073_0247856 3300049589 Unclassified 1230
115 Ga0501076_0052591 3300049592 Bacteria 3227
116 Ga0501080_0005597 3300049742 Bacteria 11228
117 nmdc:mga05p37_10357_c1 3300050507 Bacteria 11067
118 nmdc:mga05p37_26006_c1 3300050507 Bacteria 7116
119 nmdc:mga09592_283435_c1 3300050508 Bacteria 1437
120 nmdc:mga09592_2904_c1 3300050508 Bacteria 13896
121 nmdc:mga09592_333249_c1 3300050508 Bacteria 1314
122 nmdc:mga09592_84448_c1 3300050508 Bacteria 2707
123 nmdc:mga0qj67_293025_c1 3300050509 Unclassified 1319
124 nmdc:mga06r32_314982_c1 3300050510 Unclassified 1550
125 nmdc:mga0a205_125445_c1 3300050515 Bacteria 2466
126 Ga0501084_0004012 3300054114 Bacteria 11989

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031903 Ga0307407_10071768 Ga0307407_100717682 313
2 3300044712 Ga0453684_0042778 Ga0453684_0042778_3550_4509 319
3 3300045051 Ga0451576_0172835 Ga0451576_0172835_65_1066 319
4 3300044673 Ga0453683_0276337 Ga0453683_0276337_31_1002 323
5 3300005295 Ga0065707_10082619 Ga0065707_100826197 324
6 3300006846 Ga0075430_100074481 Ga0075430_1000744813 324
7 3300050509 nmdc:mga0qj67_293025_c1 nmdc:mga0qj67_293025_c1_216_1259 324
8 3300005548 Ga0070665_100002568 Ga0070665_1000025682 325
9 3300028379 Ga0268266_10007075 Ga0268266_100070759 325
10 3300031691 Ga0316579_10003510 Ga0316579_100035106 325
11 3300049571 Ga0501034_0162795 Ga0501034_0162795_611_1624 325
12 3300049580 Ga0501046_0016189 Ga0501046_0016189_490_1503 325
13 3300049581 Ga0501047_0073732 Ga0501047_0073732_955_1968 325
14 3300049582 Ga0501048_0014832 Ga0501048_0014832_2785_3798 325
15 3300049586 Ga0501070_0001172 Ga0501070_0001172_6279_7292 325
16 3300044712 Ga0453684_0002464 Ga0453684_0002464_22444_23451 326
17 3300006844 Ga0075428_100165845 Ga0075428_1001658453 327
18 3300049589 Ga0501073_0015807 Ga0501073_0015807_3114_4097 327
19 3300049589 Ga0501073_0026823 Ga0501073_0026823_866_1849 327
20 3300049742 Ga0501080_0005597 Ga0501080_0005597_865_1848 327
21 3300054114 Ga0501084_0004012 Ga0501084_0004012_583_1566 327
22 3300014325 Ga0163163_10061571 Ga0163163_100615712 328
23 3300014968 Ga0157379_10061425 Ga0157379_100614253 328
24 3300031691 Ga0316579_10000574 Ga0316579_100005748 328
25 3300031733 Ga0316577_10002062 Ga0316577_100020624 328
26 3300036647 Ga0316582_0000903 Ga0316582_0000903_3675_4661 328
27 3300036647 Ga0316582_0039868 Ga0316582_0039868_1853_2839 328
28 3300036712 Ga0316584_0021514 Ga0316584_0021514_3672_4658 328
29 3300036712 Ga0316584_0058274 Ga0316584_0058274_587_1573 328
30 3300044712 Ga0453684_0039036 Ga0453684_0039036_2617_3603 328
31 3300049589 Ga0501073_0026919 Ga0501073_0026919_439_1425 328
32 3300003203 JGI25406J46586_10000166 JGI25406J46586_1000016622 329
33 3300005985 Ga0081539_10000351 Ga0081539_1000035157 329
34 3300005985 Ga0081539_10006806 Ga0081539_100068065 329
35 3300031728 Ga0316578_10120935 Ga0316578_101209352 329
36 3300031733 Ga0316577_10099012 Ga0316577_100990122 329
37 3300036647 Ga0316582_0035582 Ga0316582_0035582_200_1189 329
38 3300036712 Ga0316584_0107328 Ga0316584_0107328_363_1352 329
39 3300045051 Ga0451576_0050882 Ga0451576_0050882_2143_3147 331
40 3300035398 Ga0316574_0015271 Ga0316574_0015271_253_1257 332
41 3300044712 Ga0453684_0001230 Ga0453684_0001230_50341_51360 332
42 3300050508 nmdc:mga09592_84448_c1 nmdc:mga09592_84448_c1_1473_2477 334
43 3300005295 Ga0065707_10013431 Ga0065707_100134312 337
44 3300005471 Ga0070698_100117176 Ga0070698_1001171761 337
45 3300009147 Ga0114129_10290929 Ga0114129_102909292 337
46 3300005289 Ga0065704_10094541 Ga0065704_100945412 340
47 3300005295 Ga0065707_10115928 Ga0065707_101159282 340
48 3300005444 Ga0070694_100035368 Ga0070694_1000353683 340
49 3300005468 Ga0070707_100476122 Ga0070707_1004761221 340
50 3300005471 Ga0070698_100132605 Ga0070698_1001326052 340
51 3300005518 Ga0070699_100012273 Ga0070699_1000122738 340
52 3300005549 Ga0070704_100093951 Ga0070704_1000939512 340
53 3300005844 Ga0068862_100142398 Ga0068862_1001423982 340
54 3300028380 Ga0268265_10349191 Ga0268265_103491912 340
55 3300031251 Ga0265327_10052639 Ga0265327_100526391 340
56 3300031852 Ga0307410_10232884 Ga0307410_102328842 340
57 3300031903 Ga0307407_10072486 Ga0307407_100724862 340
58 3300032002 Ga0307416_100359515 Ga0307416_1003595151 340
59 3300044712 Ga0453684_0054342 Ga0453684_0054342_2415_3437 340
60 3300044712 Ga0453684_0247405 Ga0453684_0247405_302_1324 340
61 3300045051 Ga0451576_0017771 Ga0451576_0017771_3541_4563 340
62 3300049589 Ga0501073_0247856 Ga0501073_0247856_56_1093 340
63 3300006880 Ga0075429_100013409 Ga0075429_1000134096 341
64 3300009147 Ga0114129_10001438 Ga0114129_1000143827 341
65 3300042876 Ga0451577_0001664 Ga0451577_0001664_25459_26484 341
66 3300042876 Ga0451577_0440270 Ga0451577_0440270_59_1087 341
67 3300044712 Ga0453684_0000873 Ga0453684_0000873_16983_18020 341
68 3300044712 Ga0453684_0001297 Ga0453684_0001297_24723_25760 341
69 3300044712 Ga0453684_0006880 Ga0453684_0006880_18453_19478 341
70 3300044712 Ga0453684_0060442 Ga0453684_0060442_1006_2034 341
71 3300044712 Ga0453684_0070199 Ga0453684_0070199_3299_4327 341
72 3300044712 Ga0453684_0087367 Ga0453684_0087367_995_2023 341
73 3300044712 Ga0453684_0141852 Ga0453684_0141852_1717_2757 341
74 3300045051 Ga0451576_0141311 Ga0451576_0141311_1141_2169 341
75 3300050507 nmdc:mga05p37_10357_c1 nmdc:mga05p37_10357_c1_926_1951 341
76 3300050508 nmdc:mga09592_2904_c1 nmdc:mga09592_2904_c1_5524_6549 341
77 3300003203 JGI25406J46586_10003482 JGI25406J46586_100034828 342
78 3300005471 Ga0070698_100056914 Ga0070698_1000569143 342
79 3300005985 Ga0081539_10001365 Ga0081539_1000136538 342
80 3300011119 Ga0105246_10118868 Ga0105246_101188682 342
81 3300042876 Ga0451577_0204441 Ga0451577_0204441_236_1264 342
82 3300044712 Ga0453684_0000012 Ga0453684_0000012_377652_378683 342
83 3300044712 Ga0453684_0004574 Ga0453684_0004574_19258_20298 342
84 3300044712 Ga0453684_0278783 Ga0453684_0278783_690_1718 342
85 3300045051 Ga0451576_0399460 Ga0451576_0399460_13_1041 342
86 3300005289 Ga0065704_10094225 Ga0065704_100942251 343
87 3300005295 Ga0065707_10005994 Ga0065707_100059944 343
88 3300005471 Ga0070698_100097568 Ga0070698_1000975683 343
89 3300005618 Ga0068864_100044803 Ga0068864_1000448032 343
90 3300032002 Ga0307416_100616035 Ga0307416_1006160351 343
91 3300045051 Ga0451576_0146523 Ga0451576_0146523_1302_2333 343
92 2162886007 SwRhRL2b_contig_1590914 SwRhRL2b_0257.00003480 344
93 3300005289 Ga0065704_10071051 Ga0065704_100710512 344
94 3300005295 Ga0065707_10081753 Ga0065707_1008175310 344
95 3300005295 Ga0065707_10102522 Ga0065707_101025223 344
96 3300005295 Ga0065707_10136748 Ga0065707_101367482 344
97 3300005441 Ga0070700_100229078 Ga0070700_1002290782 344
98 3300005471 Ga0070698_100104212 Ga0070698_1001042123 344
99 3300005518 Ga0070699_100000285 Ga0070699_10000028515 344
100 3300005617 Ga0068859_100047114 Ga0068859_1000471145 344
101 3300005844 Ga0068862_100008613 Ga0068862_1000086136 344
102 3300006847 Ga0075431_100300850 Ga0075431_1003008501 344
103 3300006852 Ga0075433_10110905 Ga0075433_101109052 344
104 3300006880 Ga0075429_100079793 Ga0075429_1000797932 344
105 3300006880 Ga0075429_100125797 Ga0075429_1001257972 344
106 3300006880 Ga0075429_100390186 Ga0075429_1003901861 344
107 3300006931 Ga0097620_100047112 Ga0097620_1000471125 344
108 3300009147 Ga0114129_10003769 Ga0114129_100037693 344
109 3300009147 Ga0114129_10416214 Ga0114129_104162141 344
110 3300011119 Ga0105246_10021959 Ga0105246_100219592 344
111 3300013306 Ga0163162_10280929 Ga0163162_102809292 344
112 3300026075 Ga0207708_10047430 Ga0207708_100474301 344
113 3300026116 Ga0207674_10151049 Ga0207674_101510491 344
114 3300028380 Ga0268265_10004727 Ga0268265_100047273 344
115 3300042876 Ga0451577_0015235 Ga0451577_0015235_500_1537 344
116 3300044673 Ga0453683_0041966 Ga0453683_0041966_1253_2287 344
117 3300044712 Ga0453684_0160868 Ga0453684_0160868_357_1391 344
118 3300044712 Ga0453684_0203574 Ga0453684_0203574_104_1147 344
119 3300045051 Ga0451576_0047300 Ga0451576_0047300_2677_3711 344
120 3300049588 Ga0501072_0108498 Ga0501072_0108498_151_1185 344
121 3300049592 Ga0501076_0052591 Ga0501076_0052591_1971_3032 344
122 3300050507 nmdc:mga05p37_26006_c1 nmdc:mga05p37_26006_c1_5639_6673 344
123 3300050508 nmdc:mga09592_283435_c1 nmdc:mga09592_283435_c1_67_1101 344
124 3300050508 nmdc:mga09592_333249_c1 nmdc:mga09592_333249_c1_91_1125 344
125 3300050510 nmdc:mga06r32_314982_c1 nmdc:mga06r32_314982_c1_110_1144 344
126 3300050515 nmdc:mga0a205_125445_c1 nmdc:mga0a205_125445_c1_1127_2161 344

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

23

138

0.92

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

146

271

0.9

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

150

349

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kpf-assembly1.cif.gz_A x-ray structure of the mutant lys300met of polyamine oxidase from zea mays 0.957 2 32
1b37-assembly2.cif.gz_B a 30 angstrom u-shaped catalytic tunnel in the crystal structure of polyamine oxidase 0.9204 1 35
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.8906 1 340
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.8778 1 340
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8743 1 334
ID Description Score Start End Superfamily
3gsiA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9402 2 32 3.50.50.60
af_P9WNG1_4_225_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9187 2 35 3.50.50.60
3l1rB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9016 2 35 3.50.50.60
af_Q9FNA2_6_429_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9009 4 35 3.50.50.60
4iv9A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8994 2 35 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2D5XJI8-F1-model_v4 Oxidoreductase 0.9491 2 339 GO:0000166
GO:0016491
AF-A0A3D3GMP4-F1-model_v4 GFO/IDH/MocA-like oxidoreductase domain-containing protein 0.9451 120 298
AF-A0A2E3C937-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9416 1 331 GO:0000166
GO:0016491
AF-A0A1F2UZZ8-F1-model_v4 Oxidoreductase 0.9402 2 340 GO:0000166
GO:0016491
AF-A0A2E5QK15-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9374 2 340 GO:0000166
GO:0016491

Feature Viewer

pLDDT pTM Quality
93.91 0.91 High
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Predicted Structure (AlphaFold2)

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