F126560

General Info

Members Datasets Scaffolds Average Seq Length
125 90 250 143

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_11876989|Ga0157372_118769891
Length 141
Sequence MKLLQQLKVLCGGKSLPTHLRHGQLGETAAKNFLCKKGLKFLTANFGIAGKGEIDLIFREADCLVFVEVKTRSSEDWARPSSAVDRDKRERLVKMSLAYRRRLPNPYVKYRYDIVEVLLEDGEVTQVRHIPNAFTEDLRKR

Samples

Sample ID Description Type Environment
1 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
2 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
3 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
44 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
47 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
54 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
55 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
56 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
57 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
58 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
59 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
66 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
81 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
90 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.2
Rhizosphere 96
Stem 0
Stem Tuber 0
Unclassified 48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157372_11876989 3300013307 Unclassified 689
2 Ga0070669_100896418 3300005353 Unclassified 757
3 Ga0070688_100024507 3300005365 Bacteria 3561
4 Ga0070714_101134100 3300005435 Bacteria 762
5 Ga0070685_10009934 3300005466 Bacteria 4936
6 Ga0070679_101490372 3300005530 Unclassified 623
7 Ga0070684_100439328 3300005535 Bacteria 1205
8 Ga0068855_100789517 3300005563 Bacteria 1010
9 Ga0068857_100023334 3300005577 Bacteria 5445
10 Ga0068859_100161369 3300005617 Unclassified 2320
11 Ga0068864_100345372 3300005618 Unclassified 1403
12 Ga0068863_100010468 3300005841 Bacteria 9016
13 Ga0068858_100064198 3300005842 Bacteria 3398
14 Ga0068858_100611766 3300005842 Bacteria 1057
15 Ga0081455_10394544 3300005937 Unclassified 962
16 Ga0097621_100224266 3300006237 Unclassified 1639
17 Ga0097621_100566435 3300006237 Unclassified 1035
18 Ga0097621_101516052 3300006237 Unclassified 636
19 Ga0075428_100832545 3300006844 Bacteria 980
20 Ga0075430_100127160 3300006846 Bacteria 2124
21 Ga0075430_101115895 3300006846 Unclassified 650
22 Ga0075431_100214587 3300006847 Bacteria 1965
23 Ga0075434_101170005 3300006871 Unclassified 781
24 Ga0075434_101240382 3300006871 Unclassified 757
25 Ga0075429_100580533 3300006880 Bacteria 982
26 Ga0097620_100161379 3300006931 Unclassified 2320
27 Ga0105240_10032180 3300009093 Bacteria 6793
28 Ga0105240_10033012 3300009093 Bacteria 6692
29 Ga0111539_10406299 3300009094 Bacteria 1586
30 Ga0111539_10414447 3300009094 Unclassified 1569
31 Ga0111539_11282868 3300009094 Unclassified 850
32 Ga0105247_10496731 3300009101 Unclassified 888
33 Ga0105248_10183937 3300009177 Unclassified 2355
34 Ga0105238_10020309 3300009551 Bacteria 6762
35 Ga0105238_10104227 3300009551 Unclassified 2817
36 Ga0157374_10138920 3300013296 Unclassified 2357
37 Ga0157375_10953389 3300013308 Unclassified 1000
38 Ga0163163_10040234 3300014325 Bacteria 4564
39 Ga0163163_10367982 3300014325 Unclassified 1494
40 Ga0157376_10564637 3300014969 Unclassified 1128
41 Ga0207685_10773403 3300025905 Bacteria 527
42 Ga0207695_10013561 3300025913 Bacteria 9710
43 Ga0207695_10180501 3300025913 Bacteria 2031
44 Ga0207652_10601067 3300025921 Unclassified 986
45 Ga0207694_10055985 3300025924 Unclassified 3062
46 Ga0207694_10753984 3300025924 Unclassified 822
47 Ga0207670_10719070 3300025936 Unclassified 828
48 Ga0207711_10862000 3300025941 Bacteria 843
49 Ga0207667_10698911 3300025949 Bacteria 1017
50 Ga0207703_10073209 3300026035 Unclassified 2834
51 Ga0207703_12212542 3300026035 Unclassified 526
52 Ga0207702_11424816 3300026078 Unclassified 686
53 Ga0207641_10596463 3300026088 Unclassified 1081
54 Ga0207676_10328257 3300026095 Unclassified 1407
55 Ga0207676_12120558 3300026095 Unclassified 560
56 Ga0207674_10032703 3300026116 Bacteria 5453
57 Ga0265326_10096306 3300028558 Unclassified 839
58 Ga0265334_10087318 3300028573 Bacteria 1142
59 Ga0265338_10046367 3300028800 Bacteria 3984
60 Ga0265338_10095221 3300028800 Bacteria 2447
61 Ga0265324_10007832 3300029957 Bacteria 4292
62 Ga0265324_10035253 3300029957 Bacteria 1742
63 Ga0265324_10089910 3300029957 Bacteria 1044
64 Ga0265324_10090024 3300029957 Unclassified 1043
65 Ga0265339_10022617 3300031249 Bacteria 3641
66 Ga0265327_10010972 3300031251 Bacteria 6303
67 Ga0265327_10340075 3300031251 Unclassified 656
68 Ga0265316_10449021 3300031344 Unclassified 925
69 Ga0307408_101333008 3300031548 Unclassified 674
70 Ga0265313_10049348 3300031595 Bacteria 2026
71 Ga0265314_10320224 3300031711 Unclassified 863
72 Ga0373926_0134711 3300035083 Unclassified 937
73 Ga0373953_0456455 3300035117 Unclassified 565
74 Ga0373946_0041109 3300035171 Bacteria 1895
75 Ga0373935_0012033 3300035692 Bacteria 5201
76 Ga0373927_0007802 3300035695 Bacteria 7241
77 Ga0373927_0022848 3300035695 Bacteria 4096
78 Ga0373947_0075371 3300035725 Bacteria 2077
79 Ga0373937_0337227 3300036401 Bacteria 1428
80 Ga0373925_0002110 3300037068 Bacteria 16326
81 Ga0395899_0441606 3300037312 Unclassified 854
82 Ga0395900_0470857 3300037418 Unclassified 1210
83 Ga0395905_0108861 3300037471 Unclassified 2602
84 Ga0395905_0123812 3300037471 Bacteria 2431
85 Ga0395901_0123903 3300038443 Bacteria 2716
86 Ga0451802_1399122 3300041460 Unclassified 565
87 Ga0451849_1386996 3300041505 Unclassified 591
88 Ga0451577_0002071 3300042876 Bacteria 24749
89 Ga0451577_0004409 3300042876 Bacteria 14881
90 Ga0451577_0150915 3300042876 Bacteria 2091
91 Ga0451577_0416432 3300042876 Bacteria 1220
92 Ga0451577_0513745 3300042876 Bacteria 1088
93 Ga0453683_0373124 3300044673 Bacteria 918
94 Ga0453684_0249385 3300044712 Bacteria 2039
95 Ga0453684_0306449 3300044712 Bacteria 1804
96 Ga0453684_0400964 3300044712 Bacteria 1536
97 Ga0453684_1236811 3300044712 Bacteria 782
98 Ga0451576_0098296 3300045051 Unclassified 3044
99 Ga0451576_0119470 3300045051 Bacteria 2744
100 Ga0451576_0260666 3300045051 Unclassified 1812
101 Ga0451576_1257550 3300045051 Bacteria 772
102 Ga0451576_1309528 3300045051 Unclassified 755
103 Ga0495630_0016001 3300046517 Bacteria 5481
104 Ga0495666_0017837 3300046526 Bacteria 3536
105 Ga0495652_0531496 3300046529 Unclassified 811
106 Ga0495586_0052151 3300046535 Bacteria 2214
107 Ga0495586_0207566 3300046535 Unclassified 1111
108 Ga0495645_0068573 3300046543 Bacteria 2560
109 Ga0495645_0351862 3300046543 Unclassified 949
110 Ga0495634_0156026 3300046642 Unclassified 1441
111 Ga0495657_0114130 3300046675 Bacteria 1708
112 Ga0495658_0057531 3300046683 Bacteria 2221
113 Ga0495613_0173727 3300046689 Unclassified 1528
114 Ga0495613_0357610 3300046689 Unclassified 1002
115 Ga0495624_0504409 3300046690 Unclassified 724
116 Ga0495676_0574852 3300047321 Unclassified 735
117 Ga0496106_1453623 3300048909 Unclassified 528
118 Ga0496107_0121062 3300048910 Bacteria 1928
119 Ga0496112_0893214 3300048915 Unclassified 811
120 Ga0501034_0226298 3300049571 Bacteria 1821
121 nmdc:mga09592_640575_c1 3300050508 Bacteria 908
122 nmdc:mga0qj67_83477_c1 3300050509 Bacteria 2561
123 nmdc:mga06r32_80783_c1 3300050510 Unclassified 3165
124 nmdc:mga0n895_931247_c1 3300050512 Unclassified 853
125 nmdc:mga0rr50_642936_c1 3300050513 Bacteria 905
126 Ga0157372_11876989
127 Ga0070669_100896418
128 Ga0070688_100024507
129 Ga0070714_101134100
130 Ga0070685_10009934
131 Ga0070679_101490372
132 Ga0070684_100439328
133 Ga0068855_100789517
134 Ga0068857_100023334
135 Ga0068859_100161369
136 Ga0068864_100345372
137 Ga0068863_100010468
138 Ga0068858_100064198
139 Ga0068858_100611766
140 Ga0081455_10394544
141 Ga0097621_100224266
142 Ga0097621_100566435
143 Ga0097621_101516052
144 Ga0075428_100832545
145 Ga0075430_100127160
146 Ga0075430_101115895
147 Ga0075431_100214587
148 Ga0075434_101170005
149 Ga0075434_101240382
150 Ga0075429_100580533
151 Ga0097620_100161379
152 Ga0105240_10032180
153 Ga0105240_10033012
154 Ga0111539_10406299
155 Ga0111539_10414447
156 Ga0111539_11282868
157 Ga0105247_10496731
158 Ga0105248_10183937
159 Ga0105238_10020309
160 Ga0105238_10104227
161 Ga0157374_10138920
162 Ga0157375_10953389
163 Ga0163163_10040234
164 Ga0163163_10367982
165 Ga0157376_10564637
166 Ga0207685_10773403
167 Ga0207695_10013561
168 Ga0207695_10180501
169 Ga0207652_10601067
170 Ga0207694_10055985
171 Ga0207694_10753984
172 Ga0207670_10719070
173 Ga0207711_10862000
174 Ga0207667_10698911
175 Ga0207703_10073209
176 Ga0207703_12212542
177 Ga0207702_11424816
178 Ga0207641_10596463
179 Ga0207676_10328257
180 Ga0207676_12120558
181 Ga0207674_10032703
182 Ga0265326_10096306
183 Ga0265334_10087318
184 Ga0265338_10046367
185 Ga0265338_10095221
186 Ga0265324_10007832
187 Ga0265324_10035253
188 Ga0265324_10089910
189 Ga0265324_10090024
190 Ga0265339_10022617
191 Ga0265327_10010972
192 Ga0265327_10340075
193 Ga0265316_10449021
194 Ga0307408_101333008
195 Ga0265313_10049348
196 Ga0265314_10320224
197 Ga0373926_0134711
198 Ga0373953_0456455
199 Ga0373946_0041109
200 Ga0373935_0012033
201 Ga0373927_0007802
202 Ga0373927_0022848
203 Ga0373947_0075371
204 Ga0373937_0337227
205 Ga0373925_0002110
206 Ga0395899_0441606
207 Ga0395900_0470857
208 Ga0395905_0108861
209 Ga0395905_0123812
210 Ga0395901_0123903
211 Ga0451802_1399122
212 Ga0451849_1386996
213 Ga0451577_0002071
214 Ga0451577_0004409
215 Ga0451577_0150915
216 Ga0451577_0416432
217 Ga0451577_0513745
218 Ga0453683_0373124
219 Ga0453684_0249385
220 Ga0453684_0306449
221 Ga0453684_0400964
222 Ga0453684_1236811
223 Ga0451576_0098296
224 Ga0451576_0119470
225 Ga0451576_0260666
226 Ga0451576_1257550
227 Ga0451576_1309528
228 Ga0495630_0016001
229 Ga0495666_0017837
230 Ga0495652_0531496
231 Ga0495586_0052151
232 Ga0495586_0207566
233 Ga0495645_0068573
234 Ga0495645_0351862
235 Ga0495634_0156026
236 Ga0495657_0114130
237 Ga0495658_0057531
238 Ga0495613_0173727
239 Ga0495613_0357610
240 Ga0495624_0504409
241 Ga0495676_0574852
242 Ga0496106_1453623
243 Ga0496107_0121062
244 Ga0496112_0893214
245 Ga0501034_0226298
246 nmdc:mga09592_640575_c1
247 nmdc:mga0qj67_83477_c1
248 nmdc:mga06r32_80783_c1
249 nmdc:mga0n895_931247_c1
250 nmdc:mga0rr50_642936_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02021

UPF0102

Uncharacterised protein family UPF0102

26

117

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vd8-assembly1.cif.gz_B the crystal structure of alanine racemase from bacillus anthracis (ba0252) 0.9455 114 128
4lus-assembly2.cif.gz_C alanine racemase [clostridium difficile 630] 0.9149 114 128
3fov-assembly1.cif.gz_A crystal structure of protein rpa0323 of unknown function from rhodopseudomonas palustris 0.882 27 137
3fov-assembly1.cif.gz_A crystal structure of protein rpa0323 of unknown function from rhodopseudomonas palustris 0.8577 27 137
4dci-assembly1.cif.gz_B crystal structure of unknown funciton protein from synechococcus sp. wh 8102 0.7829 114 128
ID Description Score Start End Superfamily
af_P45465_23_131_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.9205 28 135 3.40.1350.10
3fovA00 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.8999 27 137 3.40.1350.10
af_P45465_23_131_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.88 28 135 3.40.1350.10
3fovA00 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.8748 27 137 3.40.1350.10
af_P9WFM9_15_126_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.8383 27 131 3.40.1350.10
ID Description Score Start End GO Terms
AF-A0A2N9NYD5-F1-model_v4 UPF0102 protein SBV1_720003 0.9709 14 143 GO:0003676
AF-A0A7C3DS07-F1-model_v4 UPF0102 protein ENS73_00905 0.9691 22 143 GO:0003676
AF-A0A349ALB9-F1-model_v4 UPF0102 protein DCR59_00555 0.9625 23 134 GO:0003676
AF-A0A1G5W4V5-F1-model_v4 UPF0102 protein SAMN02910343_01140 0.9616 24 134 GO:0003676
GO:0004519
AF-X0Z0B7-F1-model_v4 Uncharacterized protein 0.9595 21 137 GO:0003676

Map