F126364

General Info

Members Datasets Scaffolds Average Seq Length
125 67 250 325

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10282330|Ga0105243_102823302
Length 373
Sequence MFFKIDLCFKLAFAPNNDLANENALETESISSPKRSVVIRHVQLSKLGEIVMKYFVTGATGFVGSVLVKKLRESGHEVNASVRDIEKANHLVNLGIKLFKGDVTDKESMREAMTGVDGVYHVAGWYKVGVKDKTPGEKVNIQGTRNVLELMQELKIPKGVYTSTLAINSDTKGKLADENYHFMGKHLSEYNRTKAAAHDIAKEFIAKGLPLVIVQPGLIYGPDDTSAVRTTLIDFLNGKLPMLPSQTAYSWGHVDDIAQGHILAMQKGKVGESYIICGEFYKMADAFQLASQVSGKKAPMTVPYQMMKVMSVLVTPFDSIMPDSYTSEGLRSIAGVTNWGDNSKAKRELGYYPRPVSEGWVETVKHEMNLLGM

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
48 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
49 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
50 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
51 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
54 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
55 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
56 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
57 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
58 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
59 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
60 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
61 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
62 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
63 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
64 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
65 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
66 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
67 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.8
Nodule 0
Rhizoplane 0
Rhizosphere 99.2
Stem 0
Stem Tuber 0
Unclassified 24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10282330 3300009148 Bacteria 1496
2 SwRhRL2b_contig_3702633 2162886007 Bacteria 15388
3 JGI25406J46586_10012722 3300003203 Bacteria 3637
4 Ga0065704_10000314 3300005289 Bacteria 38202
5 Ga0065704_10093221 3300005289 Bacteria 2592
6 Ga0065704_10113812 3300005289 Bacteria 1904
7 Ga0065707_10003437 3300005295 Bacteria 4735
8 Ga0065707_10081868 3300005295 Bacteria 32492
9 Ga0065707_10083268 3300005295 Bacteria 9706
10 Ga0065707_10087519 3300005295 Bacteria 4992
11 Ga0070683_100238994 3300005329 Bacteria 1727
12 Ga0070689_100168943 3300005340 Bacteria 1771
13 Ga0070689_100244140 3300005340 Bacteria 1480
14 Ga0070691_10073912 3300005341 Bacteria 1658
15 Ga0070694_100013587 3300005444 Bacteria 5086
16 Ga0070694_100164160 3300005444 Unclassified 1632
17 Ga0070707_100322822 3300005468 Unclassified 1500
18 Ga0070698_100016193 3300005471 Bacteria 7872
19 Ga0070698_100045493 3300005471 Bacteria 4492
20 Ga0070698_100160566 3300005471 Bacteria 2191
21 Ga0070698_100194439 3300005471 Bacteria 1966
22 Ga0070699_100044141 3300005518 Bacteria 3859
23 Ga0070699_100062678 3300005518 Unclassified 3223
24 Ga0070679_100071279 3300005530 Bacteria 3466
25 Ga0070684_100036571 3300005535 Bacteria 4207
26 Ga0070695_100040995 3300005545 Bacteria 2933
27 Ga0070704_100059353 3300005549 Unclassified 2729
28 Ga0068859_100063211 3300005617 Bacteria 3732
29 Ga0068859_100081708 3300005617 Bacteria 3274
30 Ga0068864_100071875 3300005618 Bacteria 3014
31 Ga0068861_100125241 3300005719 Bacteria 2078
32 Ga0068863_100513885 3300005841 Unclassified 1180
33 Ga0081539_10001669 3300005985 Bacteria 35918
34 Ga0075427_10002259 3300006194 Unclassified 2567
35 Ga0075428_100186300 3300006844 Bacteria 2246
36 Ga0075428_100237934 3300006844 Bacteria 1965
37 Ga0075430_100130052 3300006846 Unclassified 2099
38 Ga0075431_100006109 3300006847 Bacteria 11942
39 Ga0075431_100044800 3300006847 Unclassified 4562
40 Ga0075433_10038300 3300006852 Bacteria 4140
41 Ga0075429_100001442 3300006880 Bacteria 19520
42 Ga0075429_100047161 3300006880 Bacteria 3748
43 Ga0075429_100058506 3300006880 Unclassified 3356
44 Ga0075429_100203048 3300006880 Bacteria 1737
45 Ga0097620_100063210 3300006931 Bacteria 3732
46 Ga0097620_100081705 3300006931 Bacteria 3274
47 Ga0114129_10005448 3300009147 Bacteria 17981
48 Ga0114129_10006286 3300009147 Bacteria 16842
49 Ga0114129_10014366 3300009147 Bacteria 11287
50 Ga0114129_10065668 3300009147 Bacteria 5064
51 Ga0114129_10255433 3300009147 Bacteria 2351
52 Ga0105243_10023241 3300009148 Bacteria 4719
53 Ga0105243_10082333 3300009148 Unclassified 2630
54 Ga0105248_10038551 3300009177 Bacteria 5348
55 Ga0105248_10436875 3300009177 Bacteria 1474
56 Ga0105246_10005252 3300011119 Bacteria 7877
57 Ga0157380_10003611 3300014326 Bacteria 10642
58 Ga0157380_10117327 3300014326 Bacteria 2248
59 Ga0157380_10124026 3300014326 Unclassified 2193
60 Ga0207652_10061628 3300025921 Bacteria 3240
61 Ga0207709_10111974 3300025935 Unclassified 1827
62 Ga0207670_10121754 3300025936 Bacteria 1897
63 Ga0207711_10096554 3300025941 Bacteria 2608
64 Ga0207661_10020863 3300025944 Bacteria 4904
65 Ga0207641_10469627 3300026088 Unclassified 1218
66 Ga0207676_10058498 3300026095 Bacteria 3041
67 Ga0207674_10049267 3300026116 Bacteria 4309
68 Ga0268265_10496624 3300028380 Unclassified 1149
69 Ga0316576_10027434 3300031727 Bacteria 4005
70 Ga0316576_10042144 3300031727 Bacteria 3289
71 Ga0307413_10146690 3300031824 Bacteria 1639
72 Ga0307406_10337292 3300031901 Bacteria 1173
73 Ga0307412_10172830 3300031911 Unclassified 1617
74 Ga0307416_100558398 3300032002 Bacteria 1219
75 Ga0373950_0000003 3300034818 Bacteria 541085
76 Ga0373937_0087003 3300036401 Bacteria 2892
77 Ga0316584_0021094 3300036712 Bacteria 4730
78 Ga0436362_0666837 3300039453 Bacteria 4742
79 Ga0453683_0005216 3300044673 Bacteria 9098
80 Ga0453683_0088484 3300044673 Unclassified 1941
81 Ga0453683_0136601 3300044673 Bacteria 1546
82 Ga0453683_0209813 3300044673 Bacteria 1237
83 Ga0453683_0243764 3300044673 Bacteria 1145
84 Ga0453684_0033342 3300044712 Bacteria 7183
85 Ga0453684_0077643 3300044712 Bacteria 4160
86 Ga0453684_0183873 3300044712 Unclassified 2451
87 Ga0453684_0342878 3300044712 Bacteria 1686
88 Ga0453684_0418873 3300044712 Bacteria 1496
89 Ga0453684_0463052 3300044712 Bacteria 1409
90 Ga0453684_0503587 3300044712 Bacteria 1340
91 Ga0453684_0525104 3300044712 Bacteria 1307
92 Ga0453684_0627491 3300044712 Bacteria 1175
93 Ga0451576_0002311 3300045051 Bacteria 28877
94 Ga0451576_0009417 3300045051 Bacteria 11326
95 Ga0451576_0027964 3300045051 Bacteria 6047
96 Ga0451576_0028788 3300045051 Bacteria 5949
97 Ga0451576_0054616 3300045051 Bacteria 4182
98 Ga0451576_0094631 3300045051 Unclassified 3107
99 Ga0451576_0135438 3300045051 Unclassified 2568
100 Ga0451576_0443866 3300045051 Bacteria 1362
101 Ga0495592_0013628 3300046454 Bacteria 6182
102 Ga0495592_0050128 3300046454 Archaea 3103
103 Ga0501067_0000169 3300049583 Bacteria 36872
104 Ga0501073_0011962 3300049589 Bacteria 6334
105 Ga0501076_0036044 3300049592 Unclassified 3874
106 Ga0501079_0016987 3300049741 Bacteria 5558
107 Ga0501079_0313964 3300049741 Bacteria 1227
108 Ga0501080_0120275 3300049742 Bacteria 2434
109 Ga0501080_0175662 3300049742 Unclassified 1973
110 nmdc:mga05p37_123533_c1 3300050507 Unclassified 3180
111 nmdc:mga05p37_26450_c1 3300050507 Bacteria 7058
112 nmdc:mga05p37_62849_c1 3300050507 Bacteria 4569
113 nmdc:mga05p37_92589_c1 3300050507 Bacteria 3725
114 nmdc:mga09592_145118_c1 3300050508 Unclassified 2046
115 nmdc:mga09592_23011_c1 3300050508 Bacteria 5142
116 nmdc:mga09592_345650_c1 3300050508 Bacteria 1288
117 nmdc:mga09592_50803_c1 3300050508 Unclassified 3497
118 nmdc:mga09592_93936_c1 3300050508 Bacteria 2565
119 nmdc:mga0qj67_110740_c1 3300050509 Unclassified 2216
120 nmdc:mga06r32_216279_c1 3300050510 Unclassified 1904
121 nmdc:mga0a205_129609_c1 3300050515 Bacteria 2423
122 nmdc:mga0a205_419945_c1 3300050515 Unclassified 1199
123 Ga0500641_0011265 3300053096 Unclassified 3244
124 Ga0501084_0171676 3300054114 Unclassified 1830
125 Ga0530510_0079698 3300061734 Unclassified 2382
126 Ga0105243_10282330
127 SwRhRL2b_contig_3702633
128 JGI25406J46586_10012722
129 Ga0065704_10000314
130 Ga0065704_10093221
131 Ga0065704_10113812
132 Ga0065707_10003437
133 Ga0065707_10081868
134 Ga0065707_10083268
135 Ga0065707_10087519
136 Ga0070683_100238994
137 Ga0070689_100168943
138 Ga0070689_100244140
139 Ga0070691_10073912
140 Ga0070694_100013587
141 Ga0070694_100164160
142 Ga0070707_100322822
143 Ga0070698_100016193
144 Ga0070698_100045493
145 Ga0070698_100160566
146 Ga0070698_100194439
147 Ga0070699_100044141
148 Ga0070699_100062678
149 Ga0070679_100071279
150 Ga0070684_100036571
151 Ga0070695_100040995
152 Ga0070704_100059353
153 Ga0068859_100063211
154 Ga0068859_100081708
155 Ga0068864_100071875
156 Ga0068861_100125241
157 Ga0068863_100513885
158 Ga0081539_10001669
159 Ga0075427_10002259
160 Ga0075428_100186300
161 Ga0075428_100237934
162 Ga0075430_100130052
163 Ga0075431_100006109
164 Ga0075431_100044800
165 Ga0075433_10038300
166 Ga0075429_100001442
167 Ga0075429_100047161
168 Ga0075429_100058506
169 Ga0075429_100203048
170 Ga0097620_100063210
171 Ga0097620_100081705
172 Ga0114129_10005448
173 Ga0114129_10006286
174 Ga0114129_10014366
175 Ga0114129_10065668
176 Ga0114129_10255433
177 Ga0105243_10023241
178 Ga0105243_10082333
179 Ga0105248_10038551
180 Ga0105248_10436875
181 Ga0105246_10005252
182 Ga0157380_10003611
183 Ga0157380_10117327
184 Ga0157380_10124026
185 Ga0207652_10061628
186 Ga0207709_10111974
187 Ga0207670_10121754
188 Ga0207711_10096554
189 Ga0207661_10020863
190 Ga0207641_10469627
191 Ga0207676_10058498
192 Ga0207674_10049267
193 Ga0268265_10496624
194 Ga0316576_10027434
195 Ga0316576_10042144
196 Ga0307413_10146690
197 Ga0307406_10337292
198 Ga0307412_10172830
199 Ga0307416_100558398
200 Ga0373950_0000003
201 Ga0373937_0087003
202 Ga0316584_0021094
203 Ga0436362_0666837
204 Ga0453683_0005216
205 Ga0453683_0088484
206 Ga0453683_0136601
207 Ga0453683_0209813
208 Ga0453683_0243764
209 Ga0453684_0033342
210 Ga0453684_0077643
211 Ga0453684_0183873
212 Ga0453684_0342878
213 Ga0453684_0418873
214 Ga0453684_0463052
215 Ga0453684_0503587
216 Ga0453684_0525104
217 Ga0453684_0627491
218 Ga0451576_0002311
219 Ga0451576_0009417
220 Ga0451576_0027964
221 Ga0451576_0028788
222 Ga0451576_0054616
223 Ga0451576_0094631
224 Ga0451576_0135438
225 Ga0451576_0443866
226 Ga0495592_0013628
227 Ga0495592_0050128
228 Ga0501067_0000169
229 Ga0501073_0011962
230 Ga0501076_0036044
231 Ga0501079_0016987
232 Ga0501079_0313964
233 Ga0501080_0120275
234 Ga0501080_0175662
235 nmdc:mga05p37_123533_c1
236 nmdc:mga05p37_26450_c1
237 nmdc:mga05p37_62849_c1
238 nmdc:mga05p37_92589_c1
239 nmdc:mga09592_145118_c1
240 nmdc:mga09592_23011_c1
241 nmdc:mga09592_345650_c1
242 nmdc:mga09592_50803_c1
243 nmdc:mga09592_93936_c1
244 nmdc:mga0qj67_110740_c1
245 nmdc:mga06r32_216279_c1
246 nmdc:mga0a205_129609_c1
247 nmdc:mga0a205_419945_c1
248 Ga0500641_0011265
249 Ga0501084_0171676
250 Ga0530510_0079698

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

54

277

0.92

PF05368

NmrA

NmrA-like family

55

220

0.9

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

55

290

0.85

PF07993

NAD_binding_4

Male sterility protein

95

273

0.83

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

54

172

0.82

PF07993

NAD_binding_4

Male sterility protein

56

118

0.82

PF13460

NAD_binding_10

NAD(P)H-binding

58

239

0.82

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

55

363

0.82

PF04321

RmlD_sub_bind

RmlD substrate binding domain

52

267

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3obb-assembly1.cif.gz_A crystal structure of a possible 3-hydroxyisobutyrate dehydrogenase from pseudomonas aeruginosa pao1 0.876 2 70
2x4g-assembly1.cif.gz_A-2 crystal structure of pa4631, a nucleoside-diphosphate-sugar epimerase from pseudomonas aeruginosa 0.8693 1 323
2x4g-assembly1.cif.gz_A-2 crystal structure of pa4631, a nucleoside-diphosphate-sugar epimerase from pseudomonas aeruginosa 0.8613 1 323
6kv9-assembly1.cif.gz_A-2 moee5 in complex with udp-glucuronic acid and nad 0.8475 1 319
2pzl-assembly1.cif.gz_B crystal structure of the bordetella bronchiseptica enzyme wbmg in complex with nad and udp 0.8468 3 318
ID Description Score Start End Superfamily
af_Q94HG6_1_340_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9059 1 322 3.40.50.720
af_Q94HG6_1_340_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9006 1 322 3.40.50.720
af_P96816_2_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8954 2 320 3.40.50.720
af_P96816_2_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8825 2 320 3.40.50.720
af_P75821_1_335_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8809 1 314 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A535R4W1-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9809 1 323 GO:0004029
GO:0005737
AF-A0A535R4W1-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9779 1 323 GO:0004029
GO:0005737
AF-A0A402AQJ7-F1-model_v4 NAD-dependent dehydratase 0.9737 58 323 GO:0004029
GO:0005737
AF-A0A402AQJ7-F1-model_v4 NAD-dependent dehydratase 0.956 58 323 GO:0004029
GO:0005737
AF-A0A1Q7QMC3-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9544 62 315 GO:0004029
GO:0005737

Map