F125284

General Info

Members Datasets Scaffolds Average Seq Length
125 98 101 500

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100004611|Ga0070660_1000046115
Length 534
Sequence MLTQAPLGTQAGKRQPLEGTLGTSRPVTEEAVLGVDIGTSSSKGVLVSLDGRLLATAVRAHAVERPAPGHVEMDAELWWSEFAAISRELTEGNDARVVTVGVSGMGPCVLLTDDDGTALRPAILYGVDTRAQLQIEALTAKYTDTAITTRCGSTLSSQAVGPKLAWLAENEPDAFSKARRLFMPSSWLVYRLTGEYVLDHHSASQSTPLYDTNANAWYEPWCRDIAPEIALPQLLWSGEVAGAIHTVAARETGLEEGTPVIAGTIDAWAEAISVDAHNPGDLMLMYGSTMFLVHTVEAMLTAPTLWSTVGVYPGSRNLAGGMATSGSITAWLKDLFGDADYADLLVAAESSGPGASGLLMLPYLAGERTPIADSRARGVIAGLTLSHTRGDIYRAALESIALGVRHNIEAMEDAGARIDRVVAVGGGTQGRLWTQIVSDVTGRDQEVPTYTIGASYGAAYLAASSVGSPSISEWNPVAETVQPSDQDAHGYEELYALYRELYPATERIAHALAARQHQPRLPGATPTEKGSLRS

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
3 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2643221619 Agromyces sp. Root81 Isolate Unclassified
6 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
7 2808606372 Agromyces sp. 23-23 Isolate Unclassified
8 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
9 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
10 2862574272 Streptomyces sp. AcE210 Isolate Nodule
11 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
12 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
13 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
14 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
15 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
16 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
17 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
32 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
33 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
34 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
35 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
36 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
37 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
38 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
42 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
43 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
44 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
45 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
46 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
47 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
48 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
49 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
50 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
51 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
52 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
55 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
56 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
57 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
58 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
59 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
60 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
61 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
62 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
63 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
64 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
65 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
66 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
67 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
68 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
69 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
70 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
71 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
72 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
73 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
84 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
85 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
89 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
90 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
92 649633069 Micromonospora sp. L5 Isolate Unclassified
93 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
94 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
95 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
96 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
97 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
98 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80
Metatranscriptomes 0.8
Isolates 19.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.4
Nodule 0.8
Rhizoplane 4
Rhizosphere 70.4
Stem 0
Stem Tuber 0
Unclassified 22.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10038158 3300005327 Bacteria 3874
2 Ga0070660_100004611 3300005339 Bacteria 9539
3 Ga0070714_100033609 3300005435 Bacteria 4289
4 Ga0070681_10054803 3300005458 Bacteria 3973
5 Ga0070665_100134041 3300005548 Bacteria 2479
6 Ga0070665_100185353 3300005548 Bacteria 2082
7 Ga0081538_10001098 3300005981 Bacteria 28674
8 Ga0075364_10061089 3300006051 Bacteria 2471
9 Ga0105243_10074016 3300009148 Bacteria 2762
10 Ga0171462_1002 3300013250 Bacteria 1052134
11 Ga0157372_10078975 3300013307 Bacteria 3720
12 Ga0157372_10147245 3300013307 Bacteria 2716
13 Ga0207707_10010144 3300025912 Bacteria 8174
14 Ga0207709_10046055 3300025935 Bacteria 2644
15 Ga0268266_10077881 3300028379 Bacteria 2884
16 Ga0307508_10002856 3300031616 Bacteria 17914
17 Ga0307508_10019766 3300031616 Bacteria 6120
18 Ga0307405_10060918 3300031731 Bacteria 2383
19 Ga0307518_10130623 3300031838 Bacteria 1766
20 Ga0307416_100040878 3300032002 Bacteria 3607
21 Ga0307415_100030234 3300032126 Bacteria 3473
22 Ga0307507_10019035 3300033179 Bacteria 7764
23 Ga0395899_0028903 3300037312 Bacteria 4172
24 Ga0395900_0197511 3300037418 Bacteria 2037
25 Ga0395898_0001316 3300037466 Bacteria 36087
26 Ga0395898_0013735 3300037466 Bacteria 8328
27 Ga0395901_0023728 3300038443 Bacteria 6290
28 Ga0439436_0003253 3300041404 Bacteria 4923
29 Ga0439433_0007308 3300041999 Bacteria 2383
30 Ga0439462_0005870 3300042015 Bacteria 3041
31 Ga0466965_0108113 3300044683 Bacteria 1427
32 Ga0466966_0055964 3300044684 Bacteria 2496
33 Ga0466961_0005734 3300044693 Bacteria 7856
34 Ga0466971_0018930 3300044719 Bacteria 3054
35 Ga0466968_0038159 3300044735 Bacteria 2018
36 Ga0466970_0000003 3300044765 Bacteria 130770
37 Ga0466970_0009603 3300044765 Bacteria 4894
38 Ga0466970_0021764 3300044765 Bacteria 3343
39 Ga0466970_0053592 3300044765 Bacteria 2154
40 Ga0466957_0020008 3300044842 Bacteria 3940
41 Ga0466957_0065790 3300044842 Bacteria 2233
42 Ga0466959_0006840 3300045049 Bacteria 7949
43 Ga0466959_0016550 3300045049 Bacteria 5391
44 Ga0466959_0030397 3300045049 Bacteria 3999
45 Ga0466958_0038477 3300045836 Bacteria 2871
46 Ga0466967_0005214 3300045976 Bacteria 8949
47 Ga0466967_0071715 3300045976 Bacteria 3102
48 Ga0495627_000666 3300046453 Bacteria 26430
49 Ga0495603_0020466 3300046455 Bacteria 4010
50 Ga0495596_0018044 3300046500 Bacteria 2913
51 Ga0495606_0004150 3300046507 Bacteria 14686
52 Ga0495656_0006953 3300046615 Bacteria 3981
53 Ga0495668_0000410 3300046616 Bacteria 55937
54 Ga0495625_0000370 3300046660 Bacteria 68874
55 Ga0495676_0052851 3300047321 Bacteria 3240
56 Ga0495626_0000025 3300048091 Bacteria 209356
57 Ga0496102_0013961 3300048905 Bacteria 6973
58 Ga0496103_0008615 3300048906 Bacteria 6058
59 Ga0496112_0002928 3300048915 Bacteria 13905
60 Ga0496113_0020092 3300048916 Bacteria 4689
61 Ga0496117_0001681 3300048920 Bacteria 30857
62 Ga0496117_0017996 3300048920 Bacteria 5879
63 Ga0496117_0022482 3300048920 Bacteria 5056
64 Ga0496117_0054241 3300048920 Bacteria 2809
65 Ga0496118_0007438 3300048921 Bacteria 11609
66 Ga0496119_0001791 3300048922 Bacteria 25018
67 Ga0496120_0001306 3300048923 Bacteria 30982
68 Ga0496122_0043078 3300048925 Bacteria 3541
69 Ga0496125_0002492 3300048928 Bacteria 23826
70 Ga0496125_0030684 3300048928 Bacteria 4804
71 Ga0496126_0001798 3300048929 Bacteria 31442
72 Ga0496126_0086490 3300048929 Bacteria 2763
73 Ga0501034_0005559 3300049571 Bacteria 13743
74 Ga0501036_0005073 3300049572 Bacteria 10657
75 Ga0501037_0004897 3300049573 Bacteria 9742
76 Ga0501037_0013741 3300049573 Bacteria 5964
77 Ga0501038_0009752 3300049574 Bacteria 8804
78 Ga0501038_0045537 3300049574 Bacteria 3808
79 Ga0501042_0000748 3300049578 Bacteria 17645
80 Ga0501042_0013737 3300049578 Bacteria 5515
81 Ga0501042_0099603 3300049578 Bacteria 2089
82 Ga0501043_0004186 3300049579 Bacteria 11786
83 Ga0501047_0000046 3300049581 Bacteria 170205
84 Ga0501047_0013057 3300049581 Bacteria 7867
85 Ga0501047_0037830 3300049581 Bacteria 4666
86 Ga0501048_0001133 3300049582 Bacteria 19992
87 Ga0501070_0000377 3300049586 Bacteria 40624
88 Ga0501070_0001212 3300049586 Bacteria 23062
89 Ga0501070_0001322 3300049586 Bacteria 22160
90 Ga0501070_0018078 3300049586 Bacteria 5915
91 Ga0501074_0000682 3300049590 Bacteria 21204
92 Ga0501074_0029080 3300049590 Bacteria 4003
93 Ga0501074_0061830 3300049590 Bacteria 2698
94 Ga0501080_0226562 3300049742 Bacteria 1709
95 Ga0501083_0000016 3300049744 Bacteria 156309
96 Ga0501035_0007955 3300049822 Bacteria 9892
97 Ga0501044_0069783 3300049823 Bacteria 3577
98 nmdc:mga00v17_27668_c1 3300050491 Bacteria 3313
99 Ga0500568_0000672 3300053139 Bacteria 24750
100 Ga0587072_001031 3300059643 Bacteria 3252
101 Ga0466962_0011673 3300061719 Bacteria 4230

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049581 Ga0501047_0013057 Ga0501047_0013057_52_1440 441
2 3300044683 Ga0466965_0108113 Ga0466965_0108113_26_1366 446
3 3300046455 Ga0495603_0020466 Ga0495603_0020466_446_1972 469
4 3300047321 Ga0495676_0052851 Ga0495676_0052851_933_2459 469
5 3300048929 Ga0496126_0086490 Ga0496126_0086490_651_2159 469
6 3300044842 Ga0466957_0065790 Ga0466957_0065790_79_1557 471
7 3300045049 Ga0466959_0016550 Ga0466959_0016550_433_1911 471
8 3300048928 Ga0496125_0002492 Ga0496125_0002492_7696_9204 471
9 3300061719 Ga0466962_0011673 Ga0466962_0011673_1037_2515 471
10 3300049586 Ga0501070_0000377 Ga0501070_0000377_30116_31753 472
11 3300013250 Ga0171462_1002 Ga0171462_1002253 473
12 3300031616 Ga0307508_10002856 Ga0307508_1000285612 473
13 3300048921 Ga0496118_0007438 Ga0496118_0007438_4135_5676 473
14 3300046453 Ga0495627_000666 Ga0495627_000666_2950_4515 475
15 3300005981 Ga0081538_10001098 Ga0081538_1000109812 477
16 3300059643 Ga0587072_001031 Ga0587072_001031_261_1736 477
17 3300048920 Ga0496117_0054241 Ga0496117_0054241_951_2420 481
18 3300048922 Ga0496119_0001791 Ga0496119_0001791_17156_18625 481
19 3300048923 Ga0496120_0001306 Ga0496120_0001306_23479_24948 481
20 3300005548 Ga0070665_100185353 Ga0070665_1001853532 482
21 3300013307 Ga0157372_10078975 Ga0157372_100789754 482
22 3300028379 Ga0268266_10077881 Ga0268266_100778812 482
23 3300033179 Ga0307507_10019035 Ga0307507_100190354 482
24 3300005548 Ga0070665_100134041 Ga0070665_1001340412 484
25 3300031731 Ga0307405_10060918 Ga0307405_100609182 485
26 3300045836 Ga0466958_0038477 Ga0466958_0038477_1335_2795 485
27 3300049571 Ga0501034_0005559 Ga0501034_0005559_2775_4253 485
28 3300049572 Ga0501036_0005073 Ga0501036_0005073_6216_7694 485
29 3300049573 Ga0501037_0004897 Ga0501037_0004897_5947_7425 485
30 3300049574 Ga0501038_0045537 Ga0501038_0045537_1562_3040 485
31 3300049578 Ga0501042_0099603 Ga0501042_0099603_122_1600 485
32 3300049579 Ga0501043_0004186 Ga0501043_0004186_2964_4442 485
33 3300049581 Ga0501047_0037830 Ga0501047_0037830_2837_4315 485
34 3300049582 Ga0501048_0001133 Ga0501048_0001133_707_2185 485
35 3300049590 Ga0501074_0000682 Ga0501074_0000682_3053_4531 485
36 3300045976 Ga0466967_0071715 Ga0466967_0071715_1062_2552 486
37 3300031616 Ga0307508_10019766 Ga0307508_100197662 487
38 3300044693 Ga0466961_0005734 Ga0466961_0005734_3243_4715 487
39 3300044719 Ga0466971_0018930 Ga0466971_0018930_1042_2514 487
40 3300045049 Ga0466959_0030397 Ga0466959_0030397_1144_2616 487
41 3300049586 Ga0501070_0001212 Ga0501070_0001212_3504_4976 488
42 iso_pu_bacteria 2816332139 2816511382 488
43 iso_pu_bacteria 2862574272 2862574372 488
44 iso_pu_bacteria 3006493962 3006497963 488
45 3300031838 Ga0307518_10130623 Ga0307518_101306231 489
46 3300048920 Ga0496117_0001681 Ga0496117_0001681_4779_6314 489
47 3300048928 Ga0496125_0030684 Ga0496125_0030684_1404_2939 489
48 3300049590 Ga0501074_0029080 Ga0501074_0029080_313_1944 490
49 3300005435 Ga0070714_100033609 Ga0070714_1000336093 491
50 iso_pu_bacteria 2946080515 2946083526 491
51 iso_pu_bacteria 8056829672 8056836237 491
52 3300006051 Ga0075364_10061089 Ga0075364_100610892 492
53 3300037466 Ga0395898_0001316 Ga0395898_0001316_17058_18572 492
54 3300044765 Ga0466970_0021764 Ga0466970_0021764_871_2349 492
55 3300049573 Ga0501037_0013741 Ga0501037_0013741_1487_2986 492
56 3300049578 Ga0501042_0013737 Ga0501042_0013737_3275_4774 492
57 3300049581 Ga0501047_0000046 Ga0501047_0000046_18637_20136 492
58 3300049586 Ga0501070_0018078 Ga0501070_0018078_1840_3372 492
59 3300049822 Ga0501035_0007955 Ga0501035_0007955_6116_7639 492
60 3300049823 Ga0501044_0069783 Ga0501044_0069783_288_1811 492
61 3300050491 nmdc:mga00v17_27668_c1 nmdc:mga00v17_27668_c1_1300_2808 492
62 iso_pu_bacteria 2791355406 2793977751 492
63 iso_pu_bacteria 8047893842 8047894574 492
64 iso_pu_bacteria 8048127548 8048134968 492
65 iso_pu_bacteria 8048356638 8048364478 492
66 iso_pu_bacteria 8048369669 8048371591 492
67 iso_pu_bacteria 8048379754 8048380525 492
68 iso_pu_bacteria 2643221597 2643997207 493
69 iso_pu_bacteria 2643221619 2644113224 493
70 iso_pu_bacteria 2808606372 2808899389 493
71 iso_pu_bacteria 2867302475 2867308070 493
72 3300049574 Ga0501038_0009752 Ga0501038_0009752_1443_3119 494
73 iso_pu_bacteria 2585428094 2587863025 494
74 iso_pu_bacteria 2622736626 2623587649 494
75 iso_pu_bacteria 2867312974 2867318507 494
76 iso_pu_bacteria 2867319477 2867320491 494
77 iso_pu_bacteria 2929219909 2929224174 494
78 3300046507 Ga0495606_0004150 Ga0495606_0004150_12044_13552 495
79 3300046616 Ga0495668_0000410 Ga0495668_0000410_36293_37801 495
80 3300046660 Ga0495625_0000370 Ga0495625_0000370_56769_58277 495
81 3300048091 Ga0495626_0000025 Ga0495626_0000025_20108_21616 495
82 3300048925 Ga0496122_0043078 Ga0496122_0043078_793_2322 495
83 iso_pu_bacteria 2887478801 2887479134 495
84 3300009148 Ga0105243_10074016 Ga0105243_100740162 497
85 3300013307 Ga0157372_10147245 Ga0157372_101472453 497
86 3300025935 Ga0207709_10046055 Ga0207709_100460552 497
87 3300044765 Ga0466970_0000003 Ga0466970_0000003_105742_107289 497
88 3300048920 Ga0496117_0022482 Ga0496117_0022482_1577_3100 497
89 3300048929 Ga0496126_0001798 Ga0496126_0001798_26556_28154 497
90 3300053139 Ga0500568_0000672 Ga0500568_0000672_22270_23790 497
91 3300005327 Ga0070658_10038158 Ga0070658_100381582 498
92 3300005339 Ga0070660_100004611 Ga0070660_1000046115 498
93 3300005458 Ga0070681_10054803 Ga0070681_100548032 498
94 3300025912 Ga0207707_10010144 Ga0207707_100101444 498
95 3300032002 Ga0307416_100040878 Ga0307416_1000408783 498
96 3300032126 Ga0307415_100030234 Ga0307415_1000302343 498
97 3300037312 Ga0395899_0028903 Ga0395899_0028903_1527_3059 498
98 3300037418 Ga0395900_0197511 Ga0395900_0197511_158_1690 498
99 3300037466 Ga0395898_0013735 Ga0395898_0013735_6398_7930 498
100 3300038443 Ga0395901_0023728 Ga0395901_0023728_936_2468 498
101 3300041404 Ga0439436_0003253 Ga0439436_0003253_77_1588 498
102 3300041999 Ga0439433_0007308 Ga0439433_0007308_678_2189 498
103 3300042015 Ga0439462_0005870 Ga0439462_0005870_1135_2646 498
104 3300044684 Ga0466966_0055964 Ga0466966_0055964_54_1661 498
105 3300044735 Ga0466968_0038159 Ga0466968_0038159_377_1984 498
106 3300044765 Ga0466970_0009603 Ga0466970_0009603_333_1940 498
107 3300044765 Ga0466970_0053592 Ga0466970_0053592_469_1980 498
108 3300044842 Ga0466957_0020008 Ga0466957_0020008_2037_3644 498
109 3300045049 Ga0466959_0006840 Ga0466959_0006840_3424_5031 498
110 3300045976 Ga0466967_0005214 Ga0466967_0005214_4004_5536 498
111 3300046500 Ga0495596_0018044 Ga0495596_0018044_88_1596 498
112 3300046615 Ga0495656_0006953 Ga0495656_0006953_1114_2622 498
113 3300048905 Ga0496102_0013961 Ga0496102_0013961_2073_3599 498
114 3300048906 Ga0496103_0008615 Ga0496103_0008615_2544_4070 498
115 3300048915 Ga0496112_0002928 Ga0496112_0002928_9595_11121 498
116 3300048916 Ga0496113_0020092 Ga0496113_0020092_438_1964 498
117 3300048920 Ga0496117_0017996 Ga0496117_0017996_1930_3441 498
118 3300049578 Ga0501042_0000748 Ga0501042_0000748_11444_13045 498
119 3300049586 Ga0501070_0001322 Ga0501070_0001322_9979_11511 498
120 3300049590 Ga0501074_0061830 Ga0501074_0061830_350_1882 498
121 3300049742 Ga0501080_0226562 Ga0501080_0226562_13_1545 498
122 3300049744 Ga0501083_0000016 Ga0501083_0000016_122999_124552 498
123 iso_pu_bacteria 2501939600 2501940569 498
124 iso_pu_bacteria 2856858025 2856863832 498
125 iso_pu_bacteria 649633069 649814445 498

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00370

FGGY_N

FGGY family of carbohydrate kinases, N-terminal domain

31

273

0.95

PF02782

FGGY_C

FGGY family of carbohydrate kinases, C-terminal domain

282

466

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ezw-assembly1.cif.gz_G crystal structure of a hyperactive escherichia coli glycerol kinase mutant gly230 --> asp obtained using microfluidic crystallization devices 0.9043 1 479
3ll3-assembly1.cif.gz_B the crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus 0.9039 4 486
5gn5-assembly1.cif.gz_B crystal structure of glycerol kinase from trypanosoma brucei gambiense complexed with cumarin derivative-17 0.9011 4 477
3ifr-assembly3.cif.gz_A the crystal structure of xylulose kinase from rhodospirillum rubrum 0.8993 5 484
2nlx-assembly1.cif.gz_A crystal structure of the apo e. coli xylulose kinase 0.8955 6 482
ID Description Score Start End Superfamily
3hz6A01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9363 5 248 3.30.420.40
3ifrA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9351 5 238 3.30.420.40
5vm1D01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9203 5 245 3.30.420.40
3ifrA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9197 5 238 3.30.420.40
3hz6A01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.918 5 248 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A7K3DS69-F1-model_v4 Sugar kinase 0.9885 5 292 GO:0005975
GO:0016301
AF-A0A4Q5YU84-F1-model_v4 deleted 0.9834 33 282
AF-A0A838QC05-F1-model_v4 Alpha/beta hydrolase fold domain-containing protein 0.972 1 493 GO:0005975
GO:0016301
GO:0016773
GO:0016787
AF-A0A2A4NM76-F1-model_v4 Carbohydrate kinase 0.9667 4 302 GO:0005975
GO:0016301
AF-A0A2W2B542-F1-model_v4 Sugar kinase 0.9655 36 449 GO:0005975
GO:0016301

Feature Viewer

pLDDT pTM Quality
93.4 0.91 High
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Predicted Structure (AlphaFold2)

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