F124481

General Info

Members Datasets Scaffolds Average Seq Length
124 107 120 1064

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2831426010|2831429089
Length 1166
Sequence IATYSFLPWLRQGIANYITAKDGDPNVKLRATIPVTLELTGEAIAGGNLTESITKNVELYCPGDIAGLSHSKSPQQEVIESIIKIEPRNWITNFEPNYLPYIDFYPEDFPWRYTPAAPDQSLSRLRPWIMLVVLKEDEFKDGANIRDKPLPFIEVANPSVFPPAEQLWAWAHVHVNRSLADDIVSKDMGLVLSNFQGVLNESPDLAYSRILCPRKLEPNAGYHAFLIPVFETGRLAGLGLNPANAPNATFSAWANYGSREASSNYPYYYRWYFRTGTLGDFEYLVRLLKPKPVDRRVGTRDMDVLHPGSNLPRINIAGLDGILKLGGALRPPLNPPPNKDKLSPEERMAVEQVEKSEIWDRPYPHPFQEALAALINLADDYAIQTAQEANTKANNNSELDLSVPIDDESDENQIDPDPLITPPLYGRWHALTQRLLKDRAGNPLSPNDNWVHQLNLDPRYRVSAGFGTKVIQKYQEEYMNAAWEQIGEVLEANRRIRLAQLAKEISWIWYDRHLRPLRAASLEKALVFTAPVHKRVISQGFTVYHQMDTSVVPTAVTSVAMRRIVRPRGRLLKSLPFGGRVQPDTIIERINNGEVTAAPPKKTPSGIATVDDVSKTLLPPNVPPFIVDLLRRFPWLQYLPLLLALLIVIGAGILGLGGIAIAFLVALFGQLPLLGLLIVIGVGILGLGGIAIASLIALFRQLQQWVKQIEQADSIREENQTPEAVDRLPKSPDFVLTEPGSGSNPSQGTTDSAEAVRFKTGLKDLYSLLGASRKVGALVPKDRLNLPTVTDATVQTINPEVAIPRRLQSIVLLPDRLKAVLGEEFQEVMAYPEIDIPMYLPLSEGRSSELFLPNINLVEQNSITLLETNQKFIEAYMVGLNHEFARELLWREYPTDQRGSYFRQFWDVSSFFDTENLNKEQLKEKLRDIPPIHRWRKDSKLGEHDNREEEGIQEEDLVLVIRGELLKKYPTAVIYAQKARWQTKDGKIDKTQPRQLVQLEGAEADNPPRDKVKTPLYGAKVDPDIYFLGFDLTASEAKGGTGERETDDPGWFFVIKERPGEPRFGLDIDKSNQIHVWNDLSWEDVLPGEPGTHIKIDRSFSLIPPPSPPQNSPPDVKAEAKAREQQYDEDKKITWDANTNSADLAYILYQVPVLVAVHASELLPPS

Samples

Sample ID Description Type Environment
1 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
2 2818991444 Filimonas endophytica 3197 Isolate Unclassified
3 2831426010 Nostoc sp. 106C Isolate Unclassified
4 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
89 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
90 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.77
Metatranscriptomes 0
Isolates 3.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.84
Nodule 0
Rhizoplane 5.65
Rhizosphere 82.26
Stem 0
Stem Tuber 0
Unclassified 7.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10028636 3300003320 Bacteria 42597
2 rootH1_10085038 3300003323 Bacteria 7537
3 Ga0055531_10000050 3300003794 Bacteria 130404
4 Ga0065704_10070984 3300005289 Bacteria 14024
5 Ga0065707_10000549 3300005295 Bacteria 21394
6 Ga0068869_100001316 3300005334 Bacteria 14695
7 Ga0070666_10000077 3300005335 Bacteria 70693
8 Ga0068868_100009408 3300005338 Bacteria 7028
9 Ga0070675_100000006 3300005354 Bacteria 280013
10 Ga0070673_100001473 3300005364 Bacteria 13771
11 Ga0070667_100003799 3300005367 Bacteria 12846
12 Ga0070667_100009717 3300005367 Bacteria 7974
13 Ga0070709_10000648 3300005434 Bacteria 19759
14 Ga0070714_100001156 3300005435 Bacteria 18995
15 Ga0070710_10000114 3300005437 Bacteria 37985
16 Ga0070708_100001456 3300005445 Bacteria 18067
17 Ga0070681_10048303 3300005458 Bacteria 4253
18 Ga0070679_100027843 3300005530 Bacteria 5568
19 Ga0070695_100000500 3300005545 Bacteria 20444
20 Ga0070696_100001936 3300005546 Bacteria 13645
21 Ga0070665_100001864 3300005548 Bacteria 23936
22 Ga0070665_100005537 3300005548 Bacteria 12988
23 Ga0068859_100000063 3300005617 Bacteria 106123
24 Ga0068859_100052622 3300005617 Bacteria 4094
25 Ga0068864_100011331 3300005618 Bacteria 7368
26 Ga0068863_100000760 3300005841 Bacteria 32338
27 Ga0068860_100000827 3300005843 Bacteria 34623
28 Ga0081455_10039765 3300005937 Bacteria 4152
29 Ga0081539_10000133 3300005985 Bacteria 173855
30 Ga0070717_10000923 3300006028 Bacteria 19569
31 Ga0070717_10002523 3300006028 Bacteria 12893
32 Ga0075365_10012816 3300006038 Bacteria 4993
33 Ga0075364_10007248 3300006051 Bacteria 6573
34 Ga0070716_100001450 3300006173 Bacteria 10550
35 Ga0070712_100003716 3300006175 Bacteria 9402
36 Ga0097621_100020518 3300006237 Bacteria 5092
37 Ga0075430_100008700 3300006846 Bacteria 8565
38 Ga0075433_10013440 3300006852 Bacteria 6657
39 Ga0075434_100049176 3300006871 Bacteria 4186
40 Ga0075429_100003278 3300006880 Bacteria 13791
41 Ga0075429_100008826 3300006880 Bacteria 8763
42 Ga0075429_100047581 3300006880 Unclassified 3731
43 Ga0097620_100000063 3300006931 Bacteria 106123
44 Ga0097620_100052623 3300006931 Bacteria 4094
45 Ga0111539_10000349 3300009094 Bacteria 56989
46 Ga0105243_10005543 3300009148 Bacteria 9834
47 Ga0105241_10003306 3300009174 Bacteria 11994
48 Ga0105242_10005735 3300009176 Bacteria 9571
49 Ga0105238_10007054 3300009551 Bacteria 11238
50 Ga0105239_10015239 3300010375 Bacteria 8518
51 Ga0105239_10045048 3300010375 Bacteria 4835
52 Ga0105246_10000583 3300011119 Bacteria 20213
53 Ga0157378_10000300 3300013297 Bacteria 47857
54 Ga0163162_10005604 3300013306 Bacteria 12136
55 Ga0157375_10010160 3300013308 Bacteria 8282
56 Ga0157375_10023727 3300013308 Bacteria 5666
57 Ga0209050_1000933 3300025298 Bacteria 38256
58 Ga0209257_1000001 3300025304 Bacteria 2274655
59 Ga0207692_10001852 3300025898 Bacteria 8040
60 Ga0207692_10006671 3300025898 Bacteria 4691
61 Ga0207680_10000064 3300025903 Bacteria 48156
62 Ga0207699_10008292 3300025906 Bacteria 5120
63 Ga0207671_10001953 3300025914 Bacteria 22743
64 Ga0207693_10003132 3300025915 Bacteria 14225
65 Ga0207694_10006039 3300025924 Bacteria 9266
66 Ga0207659_10000008 3300025926 Bacteria 321286
67 Ga0207664_10000806 3300025929 Bacteria 21231
68 Ga0207664_10001048 3300025929 Bacteria 18526
69 Ga0207665_10002650 3300025939 Bacteria 12023
70 Ga0207689_10004945 3300025942 Bacteria 12005
71 Ga0207651_10000603 3300025960 Bacteria 15162
72 Ga0207658_10034660 3300025986 Unclassified 3609
73 Ga0207678_10002084 3300026067 Bacteria 18121
74 Ga0207641_10000097 3300026088 Bacteria 123547
75 Ga0207641_10006464 3300026088 Bacteria 9874
76 Ga0207674_10004130 3300026116 Bacteria 17558
77 Ga0207428_10003154 3300027907 Bacteria 16155
78 Ga0268266_10005801 3300028379 Bacteria 11432
79 Ga0307515_10001881 3300028794 Bacteria 46707
80 Ga0307515_10015940 3300028794 Bacteria 13800
81 Ga0307512_10005111 3300030522 Bacteria 13904
82 Ga0265327_10000201 3300031251 Bacteria 124359
83 Ga0307413_10016271 3300031824 Bacteria 3837
84 Ga0307406_10020246 3300031901 Bacteria 3915
85 Ga0307409_100007104 3300031995 Bacteria 6665
86 Ga0307416_100001284 3300032002 Bacteria 13533
87 Ga0307416_100012619 3300032002 Bacteria 5703
88 Ga0373955_0011080 3300035172 Bacteria 4282
89 Ga0373937_0008190 3300036401 Bacteria 9079
90 Ga0395901_0068289 3300038443 Bacteria 3703
91 Ga0451576_0014162 3300045051 Bacteria 8887
92 Ga0451576_0051545 3300045051 Bacteria 4314
93 Ga0495592_0010317 3300046454 Bacteria 7042
94 Ga0495664_0016047 3300046477 Bacteria 4265
95 Ga0495628_0012084 3300046516 Bacteria 7281
96 Ga0495630_0003395 3300046517 Bacteria 11093
97 Ga0495643_0000035 3300046522 Bacteria 238464
98 Ga0495652_0005333 3300046529 Bacteria 12119
99 Ga0495586_0005902 3300046535 Bacteria 6550
100 Ga0495634_0000627 3300046642 Bacteria 34282
101 Ga0495635_0002852 3300046663 Bacteria 11875
102 Ga0495674_0001888 3300047319 Bacteria 20646
103 Ga0495680_0001794 3300047322 Bacteria 22711
104 Ga0496104_0052118 3300048907 Bacteria 3864
105 Ga0496105_0002649 3300048908 Bacteria 13033
106 Ga0496108_0007241 3300048911 Bacteria 8994
107 Ga0496109_0000375 3300048912 Bacteria 40722
108 Ga0496110_0001558 3300048913 Bacteria 16711
109 Ga0496114_0007619 3300048917 Bacteria 8560
110 Ga0496114_0062971 3300048917 Bacteria 3105
111 Ga0501041_0008484 3300049577 Bacteria 6046
112 Ga0501048_0029817 3300049582 Bacteria 3951
113 Ga0501075_0016757 3300049591 Bacteria 5285
114 Ga0501076_0016752 3300049592 Bacteria 5561
115 nmdc:mga09592_15883_c1 3300050508 Bacteria 6152
116 nmdc:mga0qj67_18633_c1 3300050509 Bacteria 5292
117 nmdc:mga0qj67_3078_c1 3300050509 Bacteria 11982
118 nmdc:mga06r32_1004_c1 3300050510 Bacteria 25303
119 nmdc:mga08y16_200_c1 3300050511 Bacteria 53952
120 Ga0500568_0000555 3300053139 Bacteria 27491

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025986 Ga0207658_10034660 Ga0207658_100346602 847
2 3300048917 Ga0496114_0062971 Ga0496114_0062971_118_3093 855
3 3300046454 Ga0495592_0010317 Ga0495592_0010317_2260_5496 889
4 3300046516 Ga0495628_0012084 Ga0495628_0012084_808_4044 889
5 3300046529 Ga0495652_0005333 Ga0495652_0005333_6033_9269 889
6 3300028794 Ga0307515_10015940 Ga0307515_100159403 906
7 3300006871 Ga0075434_100049176 Ga0075434_1000491762 909
8 3300025298 Ga0209050_1000933 Ga0209050_100093312 911
9 3300003323 rootH1_10085038 rootH1_100850382 914
10 3300031824 Ga0307413_10016271 Ga0307413_100162712 918
11 3300031901 Ga0307406_10020246 Ga0307406_100202462 918
12 3300031995 Ga0307409_100007104 Ga0307409_1000071042 918
13 3300032002 Ga0307416_100001284 Ga0307416_1000012844 918
14 3300031251 Ga0265327_10000201 Ga0265327_1000020142 920
15 3300050509 nmdc:mga0qj67_18633_c1 nmdc:mga0qj67_18633_c1_2262_5279 924
16 iso_pu_bacteria 2558860112 2558912640 924
17 3300005530 Ga0070679_100027843 Ga0070679_1000278432 927
18 3300005985 Ga0081539_10000133 Ga0081539_1000013332 928
19 3300026116 Ga0207674_10004130 Ga0207674_100041302 930
20 3300006038 Ga0075365_10012816 Ga0075365_100128162 933
21 3300006051 Ga0075364_10007248 Ga0075364_100072482 933
22 3300005434 Ga0070709_10000648 Ga0070709_100006482 938
23 3300005437 Ga0070710_10000114 Ga0070710_1000011426 938
24 3300005458 Ga0070681_10048303 Ga0070681_100483032 938
25 3300006028 Ga0070717_10002523 Ga0070717_100025232 938
26 3300006173 Ga0070716_100001450 Ga0070716_1000014503 938
27 3300006175 Ga0070712_100003716 Ga0070712_1000037162 938
28 3300025898 Ga0207692_10001852 Ga0207692_100018522 938
29 3300025906 Ga0207699_10008292 Ga0207699_100082922 938
30 3300025915 Ga0207693_10003132 Ga0207693_100031326 938
31 3300025929 Ga0207664_10000806 Ga0207664_100008063 938
32 3300025939 Ga0207665_10002650 Ga0207665_100026502 938
33 3300030522 Ga0307512_10005111 Ga0307512_100051112 940
34 3300049591 Ga0501075_0016757 Ga0501075_0016757_797_4117 943
35 3300006880 Ga0075429_100008826 Ga0075429_1000088262 947
36 3300050508 nmdc:mga09592_15883_c1 nmdc:mga09592_15883_c1_1908_5216 947
37 3300005354 Ga0070675_100000006 Ga0070675_10000000650 948
38 3300025926 Ga0207659_10000008 Ga0207659_1000000883 948
39 3300009148 Ga0105243_10005543 Ga0105243_100055432 952
40 3300009176 Ga0105242_10005735 Ga0105242_100057352 952
41 3300009551 Ga0105238_10007054 Ga0105238_100070541 952
42 3300025924 Ga0207694_10006039 Ga0207694_100060394 952
43 3300032002 Ga0307416_100012619 Ga0307416_1000126192 952
44 3300006880 Ga0075429_100003278 Ga0075429_1000032782 953
45 3300005545 Ga0070695_100000500 Ga0070695_10000050010 959
46 3300048908 Ga0496105_0002649 Ga0496105_0002649_1975_5307 959
47 3300005617 Ga0068859_100052622 Ga0068859_1000526222 960
48 3300006931 Ga0097620_100052623 Ga0097620_1000526232 960
49 3300048907 Ga0496104_0052118 Ga0496104_0052118_302_3634 960
50 3300005445 Ga0070708_100001456 Ga0070708_1000014563 961
51 3300035172 Ga0373955_0011080 Ga0373955_0011080_611_4045 961
52 3300036401 Ga0373937_0008190 Ga0373937_0008190_1665_5099 961
53 3300046663 Ga0495635_0002852 Ga0495635_0002852_6022_9456 961
54 3300047322 Ga0495680_0001794 Ga0495680_0001794_16712_20146 961
55 3300028794 Ga0307515_10001881 Ga0307515_100018819 963
56 3300046477 Ga0495664_0016047 Ga0495664_0016047_158_3517 964
57 3300046517 Ga0495630_0003395 Ga0495630_0003395_3979_7338 964
58 3300046535 Ga0495586_0005902 Ga0495586_0005902_968_4327 964
59 3300046642 Ga0495634_0000627 Ga0495634_0000627_30114_33473 964
60 3300047319 Ga0495674_0001888 Ga0495674_0001888_11926_15285 964
61 3300013308 Ga0157375_10010160 Ga0157375_100101602 967
62 3300005435 Ga0070714_100001156 Ga0070714_1000011563 969
63 3300025898 Ga0207692_10006671 Ga0207692_100066712 969
64 3300025929 Ga0207664_10001048 Ga0207664_100010483 969
65 3300005364 Ga0070673_100001473 Ga0070673_1000014732 970
66 3300013308 Ga0157375_10023727 Ga0157375_100237272 970
67 3300025960 Ga0207651_10000603 Ga0207651_100006032 970
68 3300005548 Ga0070665_100005537 Ga0070665_1000055375 972
69 3300028379 Ga0268266_10005801 Ga0268266_100058012 972
70 3300006852 Ga0075433_10013440 Ga0075433_100134402 975
71 3300010375 Ga0105239_10045048 Ga0105239_100450482 975
72 3300046522 Ga0495643_0000035 Ga0495643_0000035_119262_122669 976
73 3300005546 Ga0070696_100001936 Ga0070696_1000019363 981
74 3300006028 Ga0070717_10000923 Ga0070717_100009234 981
75 3300009094 Ga0111539_10000349 Ga0111539_1000034916 981
76 3300027907 Ga0207428_10003154 Ga0207428_100031543 981
77 3300050511 nmdc:mga08y16_200_c1 nmdc:mga08y16_200_c1_14619_18110 981
78 3300005289 Ga0065704_10070984 Ga0065704_100709843 982
79 3300005295 Ga0065707_10000549 Ga0065707_100005494 982
80 3300048913 Ga0496110_0001558 Ga0496110_0001558_4616_7945 982
81 3300049577 Ga0501041_0008484 Ga0501041_0008484_476_3802 982
82 3300049582 Ga0501048_0029817 Ga0501048_0029817_176_3502 982
83 3300049592 Ga0501076_0016752 Ga0501076_0016752_1739_5065 982
84 3300038443 Ga0395901_0068289 Ga0395901_0068289_302_3604 984
85 3300045051 Ga0451576_0051545 Ga0451576_0051545_127_3471 988
86 3300005937 Ga0081455_10039765 Ga0081455_100397652 989
87 3300026067 Ga0207678_10002084 Ga0207678_100020846 991
88 3300048912 Ga0496109_0000375 Ga0496109_0000375_31792_35145 994
89 3300053139 Ga0500568_0000555 Ga0500568_0000555_7460_10897 997
90 3300005548 Ga0070665_100001864 Ga0070665_1000018644 1001
91 3300006846 Ga0075430_100008700 Ga0075430_1000087002 1002
92 3300050509 nmdc:mga0qj67_3078_c1 nmdc:mga0qj67_3078_c1_8160_11588 1002
93 3300050510 nmdc:mga06r32_1004_c1 nmdc:mga06r32_1004_c1_19652_23080 1002
94 iso_pu_bacteria 2831426010 2831429089 1002
95 3300048911 Ga0496108_0007241 Ga0496108_0007241_1754_5134 1006
96 3300048917 Ga0496114_0007619 Ga0496114_0007619_3974_7354 1006
97 iso_pu_bacteria 2896085136 2896088654 1008
98 3300006880 Ga0075429_100047581 Ga0075429_1000475812 1016
99 3300045051 Ga0451576_0014162 Ga0451576_0014162_5274_8672 1023
100 3300003794 Ga0055531_10000050 Ga0055531_1000005016 1028
101 3300025304 Ga0209257_1000001 Ga0209257_1000001103 1028
102 3300005617 Ga0068859_100000063 Ga0068859_10000006324 1029
103 3300006931 Ga0097620_100000063 Ga0097620_10000006324 1029
104 3300005367 Ga0070667_100003799 Ga0070667_10000379910 1030
105 3300013306 Ga0163162_10005604 Ga0163162_100056041 1032
106 3300011119 Ga0105246_10000583 Ga0105246_100005835 1033
107 3300025914 Ga0207671_10001953 Ga0207671_100019539 1033
108 iso_pu_bacteria 2818991444 2819588459 1040
109 3300009174 Ga0105241_10003306 Ga0105241_100033062 1042
110 3300010375 Ga0105239_10015239 Ga0105239_100152392 1042
111 3300005334 Ga0068869_100001316 Ga0068869_10000131612 1043
112 3300005335 Ga0070666_10000077 Ga0070666_1000007711 1043
113 3300005618 Ga0068864_100011331 Ga0068864_1000113312 1043
114 3300005841 Ga0068863_100000760 Ga0068863_10000076011 1043
115 3300025903 Ga0207680_10000064 Ga0207680_1000006419 1043
116 3300025942 Ga0207689_10004945 Ga0207689_100049452 1043
117 3300026088 Ga0207641_10000097 Ga0207641_1000009762 1043
118 3300005338 Ga0068868_100009408 Ga0068868_1000094082 1044
119 3300013297 Ga0157378_10000300 Ga0157378_1000030031 1044
120 3300005367 Ga0070667_100009717 Ga0070667_1000097172 1045
121 3300005843 Ga0068860_100000827 Ga0068860_10000082719 1045
122 3300006237 Ga0097621_100020518 Ga0097621_1000205182 1045
123 3300026088 Ga0207641_10006464 Ga0207641_100064642 1046
124 3300003320 rootH2_10028636 rootH2_100286369 1048

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bcf-assembly1.cif.gz_A alpha-amylase b from halothermothrix orenii 0.4355 66 283
7x95-assembly1.cif.gz_L the sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab709 0.4067 827 936
5ku0-assembly1.cif.gz_7 expanded poliovirus in complex with vhh 17b 0.3871 65 267
5ku0-assembly1.cif.gz_7 expanded poliovirus in complex with vhh 17b 0.3825 65 267
4z7a-assembly1.cif.gz_A structural and biochemical characterization of a non-functionally redundant m. tuberculosis (3,3) l,d-transpeptidase, ldtmt5. 0.3652 27 264
ID Description Score Start End Superfamily
3bcfA01 Mainly Beta;Sandwich;Immunoglobulin-like; 0.5688 66 264 2.60.40.1220
3bcfA01 Mainly Beta;Sandwich;Immunoglobulin-like; 0.5586 66 264 2.60.40.1220
6nfsA00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.549 66 265 2.60.40.1220
6nfsA00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.5292 66 265 2.60.40.1220
af_Q9YHZ5_15_124_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.4776 829 911 3.30.200.20
ID Description Score Start End GO Terms
AF-A0A2T5HYR2-F1-model_v4 Uncharacterized protein 0.882 1 265
AF-A0A2T5HYR2-F1-model_v4 Uncharacterized protein 0.8575 1 265
AF-A5UXZ5-F1-model_v4 Uncharacterized protein 0.8424 749 1048
AF-A0A2T5HYP1-F1-model_v4 Uncharacterized protein 0.8411 674 1048
AF-A5UXZ5-F1-model_v4 Uncharacterized protein 0.8397 749 1048

Feature Viewer

pLDDT pTM Quality
78.84 0.67 Medium
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Predicted Structure (AlphaFold2)

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