F123972

General Info

Members Datasets Scaffolds Average Seq Length
124 95 248 454

Family's Representative Sequence

Representative Sequence 3300048916|Ga0496113_0098008|Ga0496113_0098008_565_2040
Length 485
Sequence MLLDDPRIRAFAERNPADAYSSAMTEHPRSAADLVRMIGAGEVSPSAVVEDALTRIVARNAELNAFSVVLDNEARDEARSLDLAGGGVRGPLHGVPVAIKEELDVAGCVTTFGGHGNSTPVTADGEVVRRLRAAGAVVVGKTHMPEFGAWPYTESVAHGYTRNPWRTAFSPGGSSVASGMVPVGMGGDGGGSIRIPAAFCGLFGLKPQRGRVTTSPMEHLWWALGTVGPLTRTVLDSAIVYDVIRGNLPTDRWRAGEVGSFVDAVGREPGRLRVGWTVKPVTKGVTPHPEHVEAVRRTAALLGDLGHDVREIDPRYPDPTTAFVPQFFAGIRTEAHAVEHYDRLERRTRETCRLGSWVTPRVIDLALRQTERISARANRVFDPQPASERAGIDVLLTPSTANRPPRVGVLDGTGSVRASLKAIPAITYAALWNLAGNPACNVPAGTAADGLPLGVQLVGRTDGEETLLSLAAQLEAARPWPLTAP

Samples

Sample ID Description Type Environment
1 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
4 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
23 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
24 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
38 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
39 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
40 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
44 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
47 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
48 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
49 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
50 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
51 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
55 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
56 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
57 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
58 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
59 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
60 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
63 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
64 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
65 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
66 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
67 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
68 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
71 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
72 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
73 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
78 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
81 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
82 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
83 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
87 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
88 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
89 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
92 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
93 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
94 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
95 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.58
Metatranscriptomes 0
Isolates 2.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.71
Nodule 0
Rhizoplane 16.94
Rhizosphere 64.52
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496113_0098008 3300048916 Bacteria 2269
2 Ga0070683_100029593 3300005329 Bacteria 4960
3 Ga0070707_100057645 3300005468 Bacteria 3726
4 Ga0070698_100003514 3300005471 Bacteria 17249
5 Ga0070679_100210166 3300005530 Bacteria 1910
6 Ga0070684_100126799 3300005535 Bacteria 2300
7 Ga0070665_100000560 3300005548 Bacteria 51879
8 Ga0068860_100001557 3300005843 Bacteria 24714
9 Ga0075365_10000135 3300006038 Bacteria 22900
10 Ga0075365_10025096 3300006038 Bacteria 3770
11 Ga0075365_10047975 3300006038 Bacteria 2809
12 Ga0075365_10077647 3300006038 Bacteria 2244
13 Ga0075365_10090023 3300006038 Bacteria 2089
14 Ga0075363_100009858 3300006048 Bacteria 4507
15 Ga0075363_100032559 3300006048 Bacteria 2709
16 Ga0075363_100061650 3300006048 Bacteria 2022
17 Ga0075364_10013669 3300006051 Bacteria 5000
18 Ga0070712_100000041 3300006175 Bacteria 66654
19 Ga0075367_10059075 3300006178 Bacteria 2283
20 Ga0075428_100033195 3300006844 Bacteria 5699
21 Ga0075428_100092244 3300006844 Bacteria 3302
22 Ga0075430_100004984 3300006846 Bacteria 11177
23 Ga0075431_100008471 3300006847 Bacteria 10298
24 Ga0075431_100018497 3300006847 Bacteria 7096
25 Ga0075429_100141377 3300006880 Bacteria 2107
26 Ga0105240_10005188 3300009093 Bacteria 19491
27 Ga0114129_10002109 3300009147 Bacteria 27389
28 Ga0105237_10000501 3300009545 Bacteria 55515
29 Ga0157375_10108881 3300013308 Bacteria 2866
30 Ga0157377_10037394 3300014745 Bacteria 2674
31 Ga0213874_10008297 3300021377 Bacteria 2529
32 Ga0207647_10027100 3300025904 Bacteria 3740
33 Ga0207695_10003738 3300025913 Bacteria 21160
34 Ga0207671_10006832 3300025914 Bacteria 10078
35 Ga0207693_10000136 3300025915 Bacteria 66740
36 Ga0207663_10031811 3300025916 Bacteria 3126
37 Ga0207652_10184154 3300025921 Bacteria 1878
38 Ga0207658_10029940 3300025986 Bacteria 3850
39 Ga0207708_10039163 3300026075 Bacteria 3611
40 Ga0207674_10166765 3300026116 Bacteria 2156
41 Ga0207675_100036016 3300026118 Bacteria 4615
42 Ga0268264_10000250 3300028381 Bacteria 100909
43 Ga0265337_1015159 3300028556 Bacteria 2532
44 Ga0265327_10007253 3300031251 Bacteria 8603
45 Ga0265327_10027244 3300031251 Bacteria 3294
46 Ga0307408_100154404 3300031548 Bacteria 1815
47 Ga0316576_10088217 3300031727 Bacteria 2309
48 Ga0307410_10001728 3300031852 Bacteria 10089
49 Ga0307410_10066733 3300031852 Bacteria 2480
50 Ga0307406_10054700 3300031901 Bacteria 2548
51 Ga0307409_100023768 3300031995 Bacteria 4256
52 Ga0307409_100051034 3300031995 Bacteria 3163
53 Ga0307409_100156503 3300031995 Bacteria 1986
54 Ga0307416_100001514 3300032002 Bacteria 12672
55 Ga0307416_100002715 3300032002 Bacteria 10258
56 Ga0307416_100027429 3300032002 Bacteria 4217
57 Ga0307415_100004412 3300032126 Bacteria 7294
58 Ga0316574_0015948 3300035398 Bacteria 4368
59 Ga0316584_0077129 3300036712 Bacteria 2497
60 Ga0436363_1089533 3300039450 Bacteria 7038
61 Ga0451793_0396562 3300041452 Bacteria 1433
62 Ga0466966_0026660 3300044684 Bacteria 3772
63 Ga0466963_0049084 3300044694 Bacteria 2790
64 Ga0466964_0010805 3300044706 Bacteria 3447
65 Ga0466971_0047180 3300044719 Bacteria 1936
66 Ga0466960_0016950 3300044901 Bacteria 3168
67 Ga0466967_0007835 3300045976 Bacteria 7759
68 Ga0466967_0044649 3300045976 Bacteria 3845
69 Ga0466967_0095740 3300045976 Bacteria 2707
70 Ga0495664_0000267 3300046477 Bacteria 24903
71 Ga0495652_0048695 3300046529 Bacteria 3630
72 Ga0495604_0000469 3300047317 Bacteria 35612
73 Ga0495672_0017189 3300047320 Bacteria 4842
74 Ga0496101_0045824 3300048904 Bacteria 3134
75 Ga0496102_0000148 3300048905 Bacteria 95925
76 Ga0496102_0087329 3300048905 Bacteria 2881
77 Ga0496103_0000141 3300048906 Bacteria 75035
78 Ga0496104_0000028 3300048907 Bacteria 203377
79 Ga0496104_0005454 3300048907 Bacteria 11134
80 Ga0496104_0101200 3300048907 Bacteria 2759
81 Ga0496105_0001243 3300048908 Bacteria 17793
82 Ga0496106_0035917 3300048909 Bacteria 3707
83 Ga0496107_0039002 3300048910 Bacteria 3407
84 Ga0496108_0175177 3300048911 Bacteria 1857
85 Ga0496109_0010850 3300048912 Bacteria 7799
86 Ga0496109_0079797 3300048912 Bacteria 3015
87 Ga0496110_0005905 3300048913 Bacteria 9635
88 Ga0496110_0052398 3300048913 Bacteria 3585
89 Ga0496111_0000141 3300048914 Bacteria 32275
90 Ga0496112_0001172 3300048915 Bacteria 19646
91 Ga0496114_0006871 3300048917 Bacteria 8962
92 Ga0496115_0020563 3300048918 Bacteria 5092
93 Ga0496118_0160351 3300048921 Bacteria 1392
94 Ga0501031_0044115 3300049568 Bacteria 2910
95 Ga0501031_0090303 3300049568 Bacteria 1998
96 Ga0501039_0098072 3300049575 Bacteria 2286
97 Ga0501039_0161334 3300049575 Bacteria 1762
98 Ga0501040_0137501 3300049576 Bacteria 1720
99 Ga0501042_0081045 3300049578 Bacteria 2326
100 Ga0501067_0044410 3300049583 Bacteria 2469
101 Ga0501067_0050313 3300049583 Bacteria 2309
102 Ga0501069_0039138 3300049585 Bacteria 2619
103 Ga0501070_0131570 3300049586 Bacteria 2066
104 Ga0501071_0124303 3300049587 Bacteria 1914
105 Ga0501045_0057919 3300049824 Bacteria 2836
106 Ga0501045_0148806 3300049824 Bacteria 1742
107 nmdc:mga00v17_92728_c1 3300050491 Bacteria 1899
108 nmdc:mga0yw44_16989_c1 3300050492 Bacteria 3947
109 nmdc:mga0yw44_3428_c1 3300050492 Bacteria 7040
110 nmdc:mga0yw44_60987_c1 3300050492 Bacteria 2312
111 nmdc:mga0yw44_85369_c1 3300050492 Bacteria 1986
112 nmdc:mga05p37_9972_c1 3300050507 Bacteria 11280
113 nmdc:mga09592_45987_c1 3300050508 Bacteria 3677
114 nmdc:mga0qj67_6272_c1 3300050509 Bacteria 8723
115 Ga0495601_0003876 3300053077 Bacteria 8615
116 Ga0500644_0000223 3300053088 Bacteria 32739
117 Ga0500556_0000433 3300053104 Bacteria 29907
118 Ga0501084_0160462 3300054114 Bacteria 1897
119 Ga0466962_0050856 3300061719 Bacteria 1981
120 Ga0530510_0076123 3300061734 Bacteria 2438
121 Ga0530510_0118179 3300061734 Bacteria 1945
122 2855389014 2855386786 Bacteria 4752232
123 2857482750 2857481737 Bacteria 4761446
124 8047715885 8047710418 Bacteria 11023148
125 Ga0496113_0098008
126 Ga0070683_100029593
127 Ga0070707_100057645
128 Ga0070698_100003514
129 Ga0070679_100210166
130 Ga0070684_100126799
131 Ga0070665_100000560
132 Ga0068860_100001557
133 Ga0075365_10000135
134 Ga0075365_10025096
135 Ga0075365_10047975
136 Ga0075365_10077647
137 Ga0075365_10090023
138 Ga0075363_100009858
139 Ga0075363_100032559
140 Ga0075363_100061650
141 Ga0075364_10013669
142 Ga0070712_100000041
143 Ga0075367_10059075
144 Ga0075428_100033195
145 Ga0075428_100092244
146 Ga0075430_100004984
147 Ga0075431_100008471
148 Ga0075431_100018497
149 Ga0075429_100141377
150 Ga0105240_10005188
151 Ga0114129_10002109
152 Ga0105237_10000501
153 Ga0157375_10108881
154 Ga0157377_10037394
155 Ga0213874_10008297
156 Ga0207647_10027100
157 Ga0207695_10003738
158 Ga0207671_10006832
159 Ga0207693_10000136
160 Ga0207663_10031811
161 Ga0207652_10184154
162 Ga0207658_10029940
163 Ga0207708_10039163
164 Ga0207674_10166765
165 Ga0207675_100036016
166 Ga0268264_10000250
167 Ga0265337_1015159
168 Ga0265327_10007253
169 Ga0265327_10027244
170 Ga0307408_100154404
171 Ga0316576_10088217
172 Ga0307410_10001728
173 Ga0307410_10066733
174 Ga0307406_10054700
175 Ga0307409_100023768
176 Ga0307409_100051034
177 Ga0307409_100156503
178 Ga0307416_100001514
179 Ga0307416_100002715
180 Ga0307416_100027429
181 Ga0307415_100004412
182 Ga0316574_0015948
183 Ga0316584_0077129
184 Ga0436363_1089533
185 Ga0451793_0396562
186 Ga0466966_0026660
187 Ga0466963_0049084
188 Ga0466964_0010805
189 Ga0466971_0047180
190 Ga0466960_0016950
191 Ga0466967_0007835
192 Ga0466967_0044649
193 Ga0466967_0095740
194 Ga0495664_0000267
195 Ga0495652_0048695
196 Ga0495604_0000469
197 Ga0495672_0017189
198 Ga0496101_0045824
199 Ga0496102_0000148
200 Ga0496102_0087329
201 Ga0496103_0000141
202 Ga0496104_0000028
203 Ga0496104_0005454
204 Ga0496104_0101200
205 Ga0496105_0001243
206 Ga0496106_0035917
207 Ga0496107_0039002
208 Ga0496108_0175177
209 Ga0496109_0010850
210 Ga0496109_0079797
211 Ga0496110_0005905
212 Ga0496110_0052398
213 Ga0496111_0000141
214 Ga0496112_0001172
215 Ga0496114_0006871
216 Ga0496115_0020563
217 Ga0496118_0160351
218 Ga0501031_0044115
219 Ga0501031_0090303
220 Ga0501039_0098072
221 Ga0501039_0161334
222 Ga0501040_0137501
223 Ga0501042_0081045
224 Ga0501067_0044410
225 Ga0501067_0050313
226 Ga0501069_0039138
227 Ga0501070_0131570
228 Ga0501071_0124303
229 Ga0501045_0057919
230 Ga0501045_0148806
231 nmdc:mga00v17_92728_c1
232 nmdc:mga0yw44_16989_c1
233 nmdc:mga0yw44_3428_c1
234 nmdc:mga0yw44_60987_c1
235 nmdc:mga0yw44_85369_c1
236 nmdc:mga05p37_9972_c1
237 nmdc:mga09592_45987_c1
238 nmdc:mga0qj67_6272_c1
239 Ga0495601_0003876
240 Ga0500644_0000223
241 Ga0500556_0000433
242 Ga0501084_0160462
243 Ga0466962_0050856
244 Ga0530510_0076123
245 Ga0530510_0118179
246 2855389014
247 2857482750
248 8047715885

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

47

468

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3a2p-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase 0.8877 9 435
3a2q-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate 0.8872 9 435
6c62-assembly1.cif.gz_A an unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. 0.8722 9 425
3a2p-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase 0.8683 9 435
3a2q-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate 0.8678 9 435
ID Description Score Start End Superfamily
af_P9WQ97_5_462_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9739 4 435 3.90.1300.10
af_P9WQ97_5_462_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9629 4 435 3.90.1300.10
af_P9WQ99_18_483_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9584 13 436 3.90.1300.10
af_P9WQ99_18_483_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9306 13 436 3.90.1300.10
af_P9WQ95_12_473_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9078 9 436 3.90.1300.10
ID Description Score Start End GO Terms
AF-X8DYH3-F1-model_v4 amidase (EC 3.5.1.4) 0.9787 2 218 GO:0016787
AF-A0A524KIR1-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A 0.9689 10 121 GO:0016740
AF-A0A6C1N301-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A 0.9685 9 144 GO:0016740
AF-A0A1C6N9E0-F1-model_v4 Amidase 0.9653 8 435 GO:0016787
AF-A0A841CCI2-F1-model_v4 Amidase (EC 3.5.1.4) 0.9641 2 434 GO:0016787

Map