F120336
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 123 | 78 | 123 | 258 |
Family's Representative Sequence
| Representative Sequence | 3300053177|Ga0500636_0162463|Ga0500636_0162463_64_1050 |
| Length | 291 |
| Sequence | VGICKQLKKIERNYYGLMQNERNDSVGKIIKKQNKMKAILPLTLAAASTILITSLTLHAADTDNRIESSAAKSYVFKTYLKDDSIKTESKDGIVTLTGTVAVESHKSLAENTVASLPGVKRVNNELAVVGEQPAEHSDAWITTKVKTALLFHRNVSGTGTTVYTKDGIVTLQGEVGSVAEKELATEYAQDIDNVKEVKNEMTIAKTPAASPTMSDKIDDASITAQVKSSLMSHHSTSALHTGVSTADGVVTLSGIAKNEAEKSLVTKLATDINGVTSVINNMTIAPPVAAN |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 2 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 3 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 7 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 8 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 9 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 10 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 11 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 12 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 13 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 14 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 15 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 16 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 17 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 18 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 19 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 27 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 28 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 29 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 30 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 31 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 32 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 33 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 34 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 35 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 36 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 37 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 38 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 39 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 40 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 41 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 42 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 43 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 44 | 3300034816 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 | Metagenome | Rhizosphere |
| 45 | 3300035084 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 | Metagenome | Rhizosphere |
| 46 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 47 | 3300035090 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 | Metagenome | Rhizosphere |
| 48 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 49 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 50 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 51 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 52 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 53 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 54 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 55 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 56 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 57 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 58 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 59 | 3300036457 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 60 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 61 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 62 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 63 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 64 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 65 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 78 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.37 |
| Metatranscriptomes | 1.63 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.81 |
| Nodule | 0 |
| Rhizoplane | 0.81 |
| Rhizosphere | 97.56 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.81 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065707_10169393 | 3300005295 | Bacteria | 1495 |
| 2 | Ga0070688_100006753 | 3300005365 | Bacteria | 6154 |
| 3 | Ga0070705_100457341 | 3300005440 | Bacteria | 959 |
| 4 | Ga0070685_10094038 | 3300005466 | Bacteria | 1820 |
| 5 | Ga0070686_100022663 | 3300005544 | Bacteria | 3744 |
| 6 | Ga0070686_100193449 | 3300005544 | Bacteria | 1453 |
| 7 | Ga0068855_100025096 | 3300005563 | Bacteria | 7136 |
| 8 | Ga0068855_100080056 | 3300005563 | Bacteria | 3788 |
| 9 | Ga0068857_100138069 | 3300005577 | Bacteria | 2202 |
| 10 | Ga0068856_100000573 | 3300005614 | Bacteria | 40247 |
| 11 | Ga0068856_100062796 | 3300005614 | Bacteria | 3669 |
| 12 | Ga0068856_100270413 | 3300005614 | Bacteria | 1715 |
| 13 | Ga0068859_100016069 | 3300005617 | Bacteria | 7521 |
| 14 | Ga0068863_100095342 | 3300005841 | Unclassified | 2824 |
| 15 | Ga0068863_100595384 | 3300005841 | Unclassified | 1094 |
| 16 | Ga0068858_100257170 | 3300005842 | Unclassified | 1659 |
| 17 | Ga0075429_100106948 | 3300006880 | Unclassified | 2444 |
| 18 | Ga0097620_100016069 | 3300006931 | Bacteria | 7521 |
| 19 | Ga0111539_10594135 | 3300009094 | Bacteria | 1289 |
| 20 | Ga0111539_10887936 | 3300009094 | Unclassified | 1037 |
| 21 | Ga0105238_10005770 | 3300009551 | Bacteria | 12250 |
| 22 | Ga0105238_10012208 | 3300009551 | Bacteria | 8660 |
| 23 | Ga0105238_10100901 | 3300009551 | Bacteria | 2869 |
| 24 | Ga0157374_10103310 | 3300013296 | Unclassified | 2734 |
| 25 | Ga0163163_10086615 | 3300014325 | Unclassified | 3142 |
| 26 | Ga0163163_10308882 | 3300014325 | Bacteria | 1634 |
| 27 | Ga0157376_10532670 | 3300014969 | Unclassified | 1160 |
| 28 | Ga0207694_10025780 | 3300025924 | Bacteria | 4470 |
| 29 | Ga0207694_10063674 | 3300025924 | Bacteria | 2873 |
| 30 | Ga0207694_10098221 | 3300025924 | Bacteria | 2318 |
| 31 | Ga0207659_10533682 | 3300025926 | Bacteria | 996 |
| 32 | Ga0207670_10176804 | 3300025936 | Bacteria | 1605 |
| 33 | Ga0207667_10173689 | 3300025949 | Bacteria | 2214 |
| 34 | Ga0207702_10001003 | 3300026078 | Bacteria | 28977 |
| 35 | Ga0207702_10008106 | 3300026078 | Bacteria | 8890 |
| 36 | Ga0207702_10011168 | 3300026078 | Bacteria | 7491 |
| 37 | Ga0207702_10226243 | 3300026078 | Bacteria | 1746 |
| 38 | Ga0207641_10058273 | 3300026088 | Unclassified | 3287 |
| 39 | Ga0207674_10203546 | 3300026116 | Bacteria | 1929 |
| 40 | Ga0265337_1001227 | 3300028556 | Bacteria | 12992 |
| 41 | Ga0265326_10025684 | 3300028558 | Bacteria | 1680 |
| 42 | Ga0265323_10000049 | 3300028653 | Bacteria | 64975 |
| 43 | Ga0265323_10013343 | 3300028653 | Bacteria | 3278 |
| 44 | Ga0265323_10021140 | 3300028653 | Unclassified | 2497 |
| 45 | Ga0265323_10055087 | 3300028653 | Bacteria | 1399 |
| 46 | Ga0265322_10047462 | 3300028654 | Bacteria | 1221 |
| 47 | Ga0265322_10054540 | 3300028654 | Bacteria | 1134 |
| 48 | Ga0265336_10019057 | 3300028666 | Bacteria | 2217 |
| 49 | Ga0265338_10000707 | 3300028800 | Bacteria | 56945 |
| 50 | Ga0265338_10004117 | 3300028800 | Bacteria | 19918 |
| 51 | Ga0265338_10029892 | 3300028800 | Bacteria | 5389 |
| 52 | Ga0265338_10045119 | 3300028800 | Unclassified | 4058 |
| 53 | Ga0265338_10055841 | 3300028800 | Bacteria | 3509 |
| 54 | Ga0265338_10172662 | 3300028800 | Unclassified | 1656 |
| 55 | Ga0265324_10003454 | 3300029957 | Bacteria | 7514 |
| 56 | Ga0265324_10030263 | 3300029957 | Unclassified | 1900 |
| 57 | Ga0265324_10065689 | 3300029957 | Bacteria | 1238 |
| 58 | Ga0307511_10116770 | 3300030521 | Bacteria | 1671 |
| 59 | Ga0265330_10020826 | 3300031235 | Bacteria | 2996 |
| 60 | Ga0265332_10003095 | 3300031238 | Bacteria | 8114 |
| 61 | Ga0265332_10004878 | 3300031238 | Bacteria | 6239 |
| 62 | Ga0265320_10007154 | 3300031240 | Bacteria | 6955 |
| 63 | Ga0265320_10148273 | 3300031240 | Bacteria | 1060 |
| 64 | Ga0265325_10040818 | 3300031241 | Bacteria | 2435 |
| 65 | Ga0265340_10053148 | 3300031247 | Bacteria | 1956 |
| 66 | Ga0265340_10062845 | 3300031247 | Unclassified | 1773 |
| 67 | Ga0265339_10011322 | 3300031249 | Bacteria | 5499 |
| 68 | Ga0265327_10005079 | 3300031251 | Bacteria | 11216 |
| 69 | Ga0265316_10009066 | 3300031344 | Bacteria | 9168 |
| 70 | Ga0265316_10097587 | 3300031344 | Bacteria | 2236 |
| 71 | Ga0265316_10185178 | 3300031344 | Bacteria | 1549 |
| 72 | Ga0265316_10250816 | 3300031344 | Unclassified | 1300 |
| 73 | Ga0265314_10001233 | 3300031711 | Bacteria | 29182 |
| 74 | Ga0265314_10060756 | 3300031711 | Bacteria | 2578 |
| 75 | Ga0265342_10000157 | 3300031712 | Bacteria | 76947 |
| 76 | Ga0265342_10198385 | 3300031712 | Unclassified | 1092 |
| 77 | Ga0373930_0007984 | 3300034816 | Unclassified | 1839 |
| 78 | Ga0373928_0000019 | 3300035084 | Bacteria | 28011 |
| 79 | Ga0373944_0003592 | 3300035089 | Unclassified | 4007 |
| 80 | Ga0373949_0001636 | 3300035090 | Bacteria | 6258 |
| 81 | Ga0373951_0036666 | 3300035091 | Unclassified | 1171 |
| 82 | Ga0373932_0000002 | 3300035112 | Bacteria | 711821 |
| 83 | Ga0373945_0002105 | 3300035116 | Bacteria | 6205 |
| 84 | Ga0373953_0160717 | 3300035117 | Unclassified | 965 |
| 85 | Ga0373954_0024527 | 3300035118 | Bacteria | 2750 |
| 86 | Ga0373954_0044863 | 3300035118 | Unclassified | 2064 |
| 87 | Ga0373954_0261073 | 3300035118 | Bacteria | 853 |
| 88 | Ga0373962_0000041 | 3300035242 | Bacteria | 30079 |
| 89 | Ga0373931_0000015 | 3300035691 | Bacteria | 236539 |
| 90 | Ga0373931_0187039 | 3300035691 | Unclassified | 1230 |
| 91 | Ga0373927_0102968 | 3300035695 | Bacteria | 1857 |
| 92 | Ga0373933_0103130 | 3300035724 | Bacteria | 1772 |
| 93 | Ga0373933_0462571 | 3300035724 | Bacteria | 830 |
| 94 | Ga0373947_0043446 | 3300035725 | Unclassified | 2685 |
| 95 | Ga0373937_0005846 | 3300036401 | Bacteria | 10577 |
| 96 | Ga0265778_003475 | 3300036457 | Unclassified | 1587 |
| 97 | Ga0265778_004782 | 3300036457 | Bacteria | 1414 |
| 98 | Ga0373925_0007868 | 3300037068 | Bacteria | 7766 |
| 99 | Ga0373925_0014000 | 3300037068 | Bacteria | 5806 |
| 100 | Ga0451577_0000392 | 3300042876 | Bacteria | 80426 |
| 101 | Ga0451577_0000963 | 3300042876 | Bacteria | 42128 |
| 102 | Ga0453683_0108237 | 3300044673 | Bacteria | 1747 |
| 103 | Ga0453684_0000155 | 3300044712 | Bacteria | 305046 |
| 104 | Ga0453684_0032079 | 3300044712 | Bacteria | 7363 |
| 105 | Ga0453684_0721470 | 3300044712 | Unclassified | 1081 |
| 106 | Ga0451576_0194269 | 3300045051 | Bacteria | 2120 |
| 107 | Ga0451576_0195983 | 3300045051 | Bacteria | 2110 |
| 108 | Ga0451576_0323550 | 3300045051 | Bacteria | 1614 |
| 109 | Ga0451576_0456199 | 3300045051 | Bacteria | 1342 |
| 110 | Ga0495651_0032546 | 3300046462 | Bacteria | 4067 |
| 111 | Ga0495618_0034618 | 3300046514 | Unclassified | 3168 |
| 112 | Ga0495630_0332702 | 3300046517 | Unclassified | 1162 |
| 113 | Ga0495652_0177560 | 3300046529 | Bacteria | 1638 |
| 114 | Ga0495586_0028920 | 3300046535 | Unclassified | 2966 |
| 115 | Ga0495645_0069549 | 3300046543 | Bacteria | 2541 |
| 116 | Ga0495667_0033704 | 3300046559 | Unclassified | 3427 |
| 117 | Ga0495634_0001901 | 3300046642 | Bacteria | 17904 |
| 118 | Ga0495647_0073284 | 3300046681 | Unclassified | 1375 |
| 119 | Ga0495613_0005054 | 3300046689 | Bacteria | 9891 |
| 120 | Ga0495680_0347706 | 3300047322 | Bacteria | 1033 |
| 121 | Ga0495684_0343508 | 3300047471 | Unclassified | 1062 |
| 122 | Ga0496107_0022742 | 3300048910 | Bacteria | 4432 |
| 123 | Ga0500636_0162463 | 3300053177 | Bacteria | 1216 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005466 | Ga0070685_10094038 | Ga0070685_100940382 | 226 |
| 2 | 3300031712 | Ga0265342_10198385 | Ga0265342_101983852 | 227 |
| 3 | 3300028800 | Ga0265338_10004117 | Ga0265338_1000411721 | 228 |
| 4 | 3300031247 | Ga0265340_10062845 | Ga0265340_100628451 | 234 |
| 5 | 3300046529 | Ga0495652_0177560 | Ga0495652_0177560_12_725 | 235 |
| 6 | 3300030521 | Ga0307511_10116770 | Ga0307511_101167704 | 237 |
| 7 | 3300028666 | Ga0265336_10019057 | Ga0265336_100190572 | 241 |
| 8 | 3300047322 | Ga0495680_0347706 | Ga0495680_0347706_292_1023 | 241 |
| 9 | 3300028800 | Ga0265338_10045119 | Ga0265338_100451193 | 242 |
| 10 | 3300031240 | Ga0265320_10007154 | Ga0265320_100071546 | 242 |
| 11 | 3300031711 | Ga0265314_10060756 | Ga0265314_100607562 | 244 |
| 12 | 3300005614 | Ga0068856_100062796 | Ga0068856_1000627965 | 247 |
| 13 | 3300025924 | Ga0207694_10025780 | Ga0207694_100257806 | 247 |
| 14 | 3300009551 | Ga0105238_10012208 | Ga0105238_100122086 | 250 |
| 15 | 3300026078 | Ga0207702_10011168 | Ga0207702_100111685 | 250 |
| 16 | 3300045051 | Ga0451576_0323550 | Ga0451576_0323550_617_1372 | 250 |
| 17 | 3300035724 | Ga0373933_0462571 | Ga0373933_0462571_28_810 | 251 |
| 18 | 3300037068 | Ga0373925_0014000 | Ga0373925_0014000_995_1756 | 251 |
| 19 | 3300005563 | Ga0068855_100025096 | Ga0068855_1000250968 | 252 |
| 20 | 3300025949 | Ga0207667_10173689 | Ga0207667_101736891 | 252 |
| 21 | 3300044673 | Ga0453683_0108237 | Ga0453683_0108237_716_1507 | 252 |
| 22 | 3300048910 | Ga0496107_0022742 | Ga0496107_0022742_104_889 | 252 |
| 23 | 3300028653 | Ga0265323_10021140 | Ga0265323_100211402 | 253 |
| 24 | 3300031235 | Ga0265330_10020826 | Ga0265330_100208267 | 253 |
| 25 | 3300031238 | Ga0265332_10003095 | Ga0265332_1000309514 | 253 |
| 26 | 3300031344 | Ga0265316_10009066 | Ga0265316_100090667 | 253 |
| 27 | 3300031712 | Ga0265342_10000157 | Ga0265342_1000015762 | 253 |
| 28 | 3300005365 | Ga0070688_100006753 | Ga0070688_1000067534 | 254 |
| 29 | 3300005577 | Ga0068857_100138069 | Ga0068857_1001380693 | 254 |
| 30 | 3300005614 | Ga0068856_100270413 | Ga0068856_1002704132 | 254 |
| 31 | 3300005841 | Ga0068863_100095342 | Ga0068863_1000953424 | 254 |
| 32 | 3300006880 | Ga0075429_100106948 | Ga0075429_1001069483 | 254 |
| 33 | 3300009094 | Ga0111539_10594135 | Ga0111539_105941352 | 254 |
| 34 | 3300025926 | Ga0207659_10533682 | Ga0207659_105336821 | 254 |
| 35 | 3300025936 | Ga0207670_10176804 | Ga0207670_101768042 | 254 |
| 36 | 3300026078 | Ga0207702_10226243 | Ga0207702_102262431 | 254 |
| 37 | 3300028653 | Ga0265323_10013343 | Ga0265323_100133433 | 254 |
| 38 | 3300044712 | Ga0453684_0721470 | Ga0453684_0721470_116_883 | 254 |
| 39 | 3300053177 | Ga0500636_0162463 | Ga0500636_0162463_64_1050 | 254 |
| 40 | 3300005440 | Ga0070705_100457341 | Ga0070705_1004573411 | 255 |
| 41 | 3300005842 | Ga0068858_100257170 | Ga0068858_1002571702 | 255 |
| 42 | 3300009551 | Ga0105238_10005770 | Ga0105238_100057708 | 255 |
| 43 | 3300014969 | Ga0157376_10532670 | Ga0157376_105326701 | 255 |
| 44 | 3300025924 | Ga0207694_10098221 | Ga0207694_100982213 | 255 |
| 45 | 3300028800 | Ga0265338_10055841 | Ga0265338_100558414 | 255 |
| 46 | 3300034816 | Ga0373930_0007984 | Ga0373930_0007984_116_889 | 255 |
| 47 | 3300035084 | Ga0373928_0000019 | Ga0373928_0000019_18946_19719 | 255 |
| 48 | 3300035089 | Ga0373944_0003592 | Ga0373944_0003592_1706_2479 | 255 |
| 49 | 3300035090 | Ga0373949_0001636 | Ga0373949_0001636_2566_3339 | 255 |
| 50 | 3300035112 | Ga0373932_0000002 | Ga0373932_0000002_471544_472317 | 255 |
| 51 | 3300035116 | Ga0373945_0002105 | Ga0373945_0002105_3681_4454 | 255 |
| 52 | 3300035242 | Ga0373962_0000041 | Ga0373962_0000041_27096_27869 | 255 |
| 53 | 3300035691 | Ga0373931_0000015 | Ga0373931_0000015_203955_204728 | 255 |
| 54 | 3300035691 | Ga0373931_0187039 | Ga0373931_0187039_223_1011 | 255 |
| 55 | 3300035695 | Ga0373927_0102968 | Ga0373927_0102968_809_1582 | 255 |
| 56 | 3300035725 | Ga0373947_0043446 | Ga0373947_0043446_584_1357 | 255 |
| 57 | 3300037068 | Ga0373925_0007868 | Ga0373925_0007868_4753_5526 | 255 |
| 58 | 3300042876 | Ga0451577_0000392 | Ga0451577_0000392_2556_3335 | 255 |
| 59 | 3300042876 | Ga0451577_0000963 | Ga0451577_0000963_7039_7911 | 255 |
| 60 | 3300044712 | Ga0453684_0000155 | Ga0453684_0000155_145013_145792 | 255 |
| 61 | 3300044712 | Ga0453684_0032079 | Ga0453684_0032079_1155_2027 | 255 |
| 62 | 3300045051 | Ga0451576_0195983 | Ga0451576_0195983_659_1447 | 255 |
| 63 | 3300046543 | Ga0495645_0069549 | Ga0495645_0069549_1336_2124 | 255 |
| 64 | 3300005544 | Ga0070686_100193449 | Ga0070686_1001934492 | 256 |
| 65 | 3300005563 | Ga0068855_100080056 | Ga0068855_1000800565 | 256 |
| 66 | 3300005614 | Ga0068856_100000573 | Ga0068856_10000057311 | 256 |
| 67 | 3300005617 | Ga0068859_100016069 | Ga0068859_1000160692 | 256 |
| 68 | 3300006931 | Ga0097620_100016069 | Ga0097620_1000160698 | 256 |
| 69 | 3300014325 | Ga0163163_10308882 | Ga0163163_103088821 | 256 |
| 70 | 3300026078 | Ga0207702_10001003 | Ga0207702_100010039 | 256 |
| 71 | 3300026116 | Ga0207674_10203546 | Ga0207674_102035462 | 256 |
| 72 | 3300028556 | Ga0265337_1001227 | Ga0265337_100122712 | 256 |
| 73 | 3300028558 | Ga0265326_10025684 | Ga0265326_100256844 | 256 |
| 74 | 3300028653 | Ga0265323_10000049 | Ga0265323_1000004928 | 256 |
| 75 | 3300028653 | Ga0265323_10055087 | Ga0265323_100550872 | 256 |
| 76 | 3300028654 | Ga0265322_10047462 | Ga0265322_100474622 | 256 |
| 77 | 3300028654 | Ga0265322_10054540 | Ga0265322_100545401 | 256 |
| 78 | 3300028800 | Ga0265338_10172662 | Ga0265338_101726622 | 256 |
| 79 | 3300029957 | Ga0265324_10003454 | Ga0265324_100034541 | 256 |
| 80 | 3300029957 | Ga0265324_10065689 | Ga0265324_100656891 | 256 |
| 81 | 3300031240 | Ga0265320_10148273 | Ga0265320_101482731 | 256 |
| 82 | 3300031241 | Ga0265325_10040818 | Ga0265325_100408181 | 256 |
| 83 | 3300031247 | Ga0265340_10053148 | Ga0265340_100531483 | 256 |
| 84 | 3300031249 | Ga0265339_10011322 | Ga0265339_100113227 | 256 |
| 85 | 3300031344 | Ga0265316_10097587 | Ga0265316_100975872 | 256 |
| 86 | 3300031344 | Ga0265316_10185178 | Ga0265316_101851781 | 256 |
| 87 | 3300031344 | Ga0265316_10250816 | Ga0265316_102508161 | 256 |
| 88 | 3300035091 | Ga0373951_0036666 | Ga0373951_0036666_307_1089 | 256 |
| 89 | 3300035117 | Ga0373953_0160717 | Ga0373953_0160717_79_861 | 256 |
| 90 | 3300035118 | Ga0373954_0024527 | Ga0373954_0024527_270_1049 | 256 |
| 91 | 3300035118 | Ga0373954_0044863 | Ga0373954_0044863_847_1629 | 256 |
| 92 | 3300035118 | Ga0373954_0261073 | Ga0373954_0261073_15_794 | 256 |
| 93 | 3300035724 | Ga0373933_0103130 | Ga0373933_0103130_141_920 | 256 |
| 94 | 3300036401 | Ga0373937_0005846 | Ga0373937_0005846_8946_9728 | 256 |
| 95 | 3300036457 | Ga0265778_003475 | Ga0265778_003475_30_806 | 256 |
| 96 | 3300045051 | Ga0451576_0194269 | Ga0451576_0194269_655_1431 | 256 |
| 97 | 3300045051 | Ga0451576_0456199 | Ga0451576_0456199_541_1317 | 256 |
| 98 | 3300046462 | Ga0495651_0032546 | Ga0495651_0032546_2015_2794 | 256 |
| 99 | 3300046514 | Ga0495618_0034618 | Ga0495618_0034618_2144_2926 | 256 |
| 100 | 3300046535 | Ga0495586_0028920 | Ga0495586_0028920_876_1658 | 256 |
| 101 | 3300046559 | Ga0495667_0033704 | Ga0495667_0033704_1651_2433 | 256 |
| 102 | 3300046642 | Ga0495634_0001901 | Ga0495634_0001901_9576_10358 | 256 |
| 103 | 3300046681 | Ga0495647_0073284 | Ga0495647_0073284_550_1332 | 256 |
| 104 | 3300046689 | Ga0495613_0005054 | Ga0495613_0005054_5930_6712 | 256 |
| 105 | 3300005295 | Ga0065707_10169393 | Ga0065707_101693931 | 257 |
| 106 | 3300005544 | Ga0070686_100022663 | Ga0070686_1000226633 | 257 |
| 107 | 3300005841 | Ga0068863_100595384 | Ga0068863_1005953842 | 257 |
| 108 | 3300009094 | Ga0111539_10887936 | Ga0111539_108879362 | 257 |
| 109 | 3300009551 | Ga0105238_10100901 | Ga0105238_101009013 | 257 |
| 110 | 3300013296 | Ga0157374_10103310 | Ga0157374_101033103 | 257 |
| 111 | 3300014325 | Ga0163163_10086615 | Ga0163163_100866154 | 257 |
| 112 | 3300025924 | Ga0207694_10063674 | Ga0207694_100636743 | 257 |
| 113 | 3300026078 | Ga0207702_10008106 | Ga0207702_100081065 | 257 |
| 114 | 3300026088 | Ga0207641_10058273 | Ga0207641_100582735 | 257 |
| 115 | 3300028800 | Ga0265338_10000707 | Ga0265338_1000070746 | 257 |
| 116 | 3300028800 | Ga0265338_10029892 | Ga0265338_100298925 | 257 |
| 117 | 3300029957 | Ga0265324_10030263 | Ga0265324_100302632 | 257 |
| 118 | 3300031238 | Ga0265332_10004878 | Ga0265332_100048789 | 257 |
| 119 | 3300031251 | Ga0265327_10005079 | Ga0265327_100050799 | 257 |
| 120 | 3300031711 | Ga0265314_10001233 | Ga0265314_1000123311 | 257 |
| 121 | 3300036457 | Ga0265778_004782 | Ga0265778_004782_588_1397 | 257 |
| 122 | 3300046517 | Ga0495630_0332702 | Ga0495630_0332702_43_867 | 257 |
| 123 | 3300047471 | Ga0495684_0343508 | Ga0495684_0343508_155_940 | 257 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7pvc-assembly1.cif.gz_A | the structure of kbp.k from e. coli with potassium bound. | 0.8322 | 185 | 253 |
| 3cq2-assembly1.cif.gz_B | structure of the dtdp-4-keto-l-rhamnose reductase related protein (other form) from thermus thermophilus hb8 | 0.8067 | 207 | 250 |
| 2cu6-assembly1.cif.gz_A | crystal structure of the dtdp-4-keto-l-rhamnose reductase-related protein from thermus thermophilus hb8 | 0.8039 | 207 | 250 |
| 7vcm-assembly2.cif.gz_B | crystal structure of ginko1 | 0.774 | 192 | 257 |
| 7vcm-assembly1.cif.gz_A | crystal structure of ginko1 | 0.773 | 192 | 257 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0AFH8_57_122_3.30.1340.30 | Alpha Beta;2-Layer Sandwich;Histidine-containing Protein; Chain: A;; | 0.9985 | 107 | 170 | 3.30.1340.30 |
| af_P0AFH8_137_201_3.30.1340.30 | Alpha Beta;2-Layer Sandwich;Histidine-containing Protein; Chain: A;; | 0.987 | 107 | 170 | 3.30.1340.30 |
| af_P64596_124_191_3.30.70.330 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain | 0.9738 | 103 | 171 | 3.30.70.330 |
| af_P64596_124_191_3.30.70.330 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain | 0.96 | 103 | 171 | 3.30.70.330 |
| af_P0AFH8_137_201_3.30.1340.30 | Alpha Beta;2-Layer Sandwich;Histidine-containing Protein; Chain: A;; | 0.9575 | 107 | 170 | 3.30.1340.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W1UEE1-F1-model_v4 | BON domain-containing protein | 0.9989 | 104 | 170 |
|
| AF-A0A085HNA0-F1-model_v4 | deleted | 0.9987 | 104 | 170 |
|
| AF-A0A6M8U972-F1-model_v4 | BON domain-containing protein | 0.9953 | 104 | 170 |
|
| AF-A0A1F2SWE9-F1-model_v4 | BON domain-containing protein | 0.9942 | 104 | 170 |
|
| AF-A0A7Y5TYX6-F1-model_v4 | BON domain-containing protein | 0.9937 | 104 | 170 |
|
Predicted Structure (AlphaFold2)
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