F119530

General Info

Members Datasets Scaffolds Average Seq Length
123 94 105 389

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0040336|Ga0466970_0040336_1091_2464
Length 457
Sequence MIAATPVSRLVSFLPGMTKEIVEEIAGKARAFAEEQPQHRRCRAYSTAEILSGGGRRPPAKEELVETTQIPTRAELVQRAADLVPILRENALWGERNQRLADESVAAMAEAGIFRMRVPARFGGYECDTSTLVDVGIQLGRGDGSAAFDVAAWWIMSWNVAHFPDEVQDEVFADPDVRICGTLAPTGMASPKDGGIVVSGSWNFNSGAAHSSWKILSAILPDGQGGAEPVMAIVPMSELTLLDDWEVAGLRGTGSVTAVAEDVFVPAARFQRISALLQEQYASKLNADNPIYRGPMVGPISAATVGKVVGLARAAGELFQERLPGRAITNTDYTSQLEAPVTHLQVAEAALKTDEAEFHARRIASMCDEKGLSGAPWTLRERAYARVSVGRVCQLAYEAVNLLAMASGGSSTYATVPIQRIQRDVQAINLHALNLPSTNLELYGRILCGLEPNTFFI

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
3 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
4 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
5 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
6 2643221548 Streptomyces sp. Root55 Isolate Unclassified
7 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
8 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
9 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
10 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
11 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
12 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
13 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
14 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
34 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
35 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
36 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
37 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
38 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
41 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
42 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
43 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
44 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
45 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
46 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
47 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
48 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
49 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
52 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
53 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
54 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
55 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
56 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
57 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
58 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
59 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
60 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
61 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
62 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
65 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
66 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
67 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
68 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
69 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
70 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
71 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
88 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
91 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
92 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
93 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
94 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.93
Metatranscriptomes 3.25
Isolates 13.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 1.63
Rhizosphere 82.11
Stem 0
Stem Tuber 0
Unclassified 15.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10049014 3300003320 Bacteria 12506
2 rootH2_10140122 3300003320 Bacteria 5904
3 rootH1_10216226 3300003323 Bacteria 3572
4 Ga0070668_100000173 3300005347 Bacteria 41174
5 Ga0070714_100000076 3300005435 Bacteria 84569
6 Ga0070714_100001066 3300005435 Bacteria 19609
7 Ga0070713_100193879 3300005436 Bacteria 1832
8 Ga0081539_10000197 3300005985 Bacteria 140516
9 Ga0070717_10047414 3300006028 Bacteria 3520
10 Ga0070717_10058303 3300006028 Bacteria 3193
11 Ga0075430_100000257 3300006846 Bacteria 37109
12 Ga0075430_100005775 3300006846 Bacteria 10442
13 Ga0075431_100014990 3300006847 Bacteria 7846
14 Ga0075429_100000772 3300006880 Bacteria 25204
15 Ga0075429_100140709 3300006880 Bacteria 2112
16 Ga0114129_10017882 3300009147 Bacteria 10092
17 Ga0105238_10026504 3300009551 Bacteria 5910
18 Ga0157378_10054330 3300013297 Bacteria 3566
19 Ga0157372_10000652 3300013307 Bacteria 38133
20 Ga0206353_11266848 3300020082 Bacteria 2919
21 Ga0224712_10000928 3300022467 Bacteria 6313
22 Ga0207695_10068025 3300025913 Bacteria 3650
23 Ga0207664_10000002 3300025929 Bacteria 657053
24 Ga0207664_10000534 3300025929 Bacteria 27060
25 Ga0207664_10020409 3300025929 Bacteria 4910
26 Ga0307512_10026073 3300030522 Bacteria 5165
27 Ga0265760_10008280 3300031090 Bacteria 2973
28 Ga0265760_10023818 3300031090 Bacteria 1780
29 Ga0307513_10121304 3300031456 Bacteria 2581
30 Ga0307508_10123729 3300031616 Bacteria 2189
31 Ga0307413_10016437 3300031824 Bacteria 3823
32 Ga0307518_10000143 3300031838 Bacteria 52098
33 Ga0307415_100187220 3300032126 Bacteria 1630
34 Ga0307507_10063071 3300033179 Bacteria 3434
35 Ga0307510_10116186 3300033180 Bacteria 2398
36 Ga0373926_0000488 3300035083 Bacteria 10504
37 Ga0373926_0005443 3300035083 Bacteria 4198
38 Ga0373935_0076271 3300035692 Bacteria 2170
39 Ga0373947_0000003 3300035725 Bacteria 345338
40 Ga0466969_0013803 3300044656 Bacteria 4253
41 Ga0466972_0019647 3300044658 Bacteria 3377
42 Ga0466961_0066304 3300044693 Bacteria 2293
43 Ga0466971_0058158 3300044719 Bacteria 1745
44 Ga0466968_0040175 3300044735 Bacteria 1972
45 Ga0466970_0040336 3300044765 Bacteria 2479
46 Ga0466970_0046725 3300044765 Bacteria 2306
47 Ga0466959_0078715 3300045049 Bacteria 2377
48 Ga0466958_0038425 3300045836 Bacteria 2872
49 Ga0495592_0023566 3300046454 Bacteria 4682
50 Ga0495629_0141883 3300046459 Bacteria 1671
51 Ga0495594_0074177 3300046499 Bacteria 1895
52 Ga0495618_0052659 3300046514 Bacteria 2573
53 Ga0495618_0071396 3300046514 Bacteria 2209
54 Ga0495628_0048526 3300046516 Bacteria 3365
55 Ga0495628_0133043 3300046516 Bacteria 1901
56 Ga0495652_0006454 3300046529 Bacteria 10901
57 Ga0495640_0000119 3300046533 Bacteria 46842
58 Ga0495640_0005115 3300046533 Bacteria 10420
59 Ga0495667_0032960 3300046559 Bacteria 3468
60 Ga0495668_0003207 3300046616 Bacteria 12496
61 Ga0495634_0004598 3300046642 Bacteria 10778
62 Ga0495634_0041490 3300046642 Bacteria 3124
63 Ga0495625_0001705 3300046660 Bacteria 25561
64 Ga0495657_0003707 3300046675 Bacteria 12366
65 Ga0495657_0098886 3300046675 Bacteria 1861
66 Ga0495599_0079485 3300046678 Bacteria 2048
67 Ga0495613_0007864 3300046689 Bacteria 7928
68 Ga0495613_0017799 3300046689 Bacteria 5295
69 Ga0495624_0045910 3300046690 Bacteria 2779
70 Ga0495624_0065241 3300046690 Bacteria 2275
71 Ga0495600_0005180 3300046809 Bacteria 7839
72 Ga0495604_0039001 3300047317 Bacteria 3734
73 Ga0495604_0056270 3300047317 Bacteria 3028
74 Ga0495676_0000692 3300047321 Bacteria 28092
75 Ga0495676_0001917 3300047321 Bacteria 18244
76 Ga0495626_0002557 3300048091 Bacteria 12477
77 Ga0496108_0279417 3300048911 Bacteria 1454
78 Ga0496112_0025305 3300048915 Bacteria 5699
79 Ga0501031_0024863 3300049568 Bacteria 3906
80 Ga0501031_0069551 3300049568 Bacteria 2293
81 Ga0501032_0002243 3300049569 Bacteria 15207
82 Ga0501032_0004797 3300049569 Bacteria 10136
83 Ga0501034_0006136 3300049571 Bacteria 12960
84 Ga0501034_0006992 3300049571 Bacteria 12049
85 Ga0501036_0003598 3300049572 Bacteria 12392
86 Ga0501036_0110180 3300049572 Bacteria 2326
87 Ga0501038_0004121 3300049574 Bacteria 13524
88 Ga0501038_0040183 3300049574 Bacteria 4088
89 Ga0501039_0274030 3300049575 Bacteria 1326
90 Ga0501043_0094367 3300049579 Bacteria 2352
91 Ga0501046_0106634 3300049580 Bacteria 2144
92 Ga0501046_0201888 3300049580 Bacteria 1479
93 Ga0501047_0010133 3300049581 Bacteria 8912
94 Ga0501070_0044993 3300049586 Bacteria 3672
95 Ga0501071_0259620 3300049587 Bacteria 1312
96 Ga0501076_0296252 3300049592 Bacteria 1326
97 Ga0501035_0014827 3300049822 Bacteria 7194
98 Ga0501035_0110635 3300049822 Bacteria 2407
99 nmdc:mga09592_73443_c2 3300050508 Bacteria 2057
100 nmdc:mga0qj67_152614_c1 3300050509 Bacteria 1874
101 nmdc:mga0qj67_17430_c1 3300050509 Bacteria 5460
102 nmdc:mga0qj67_6815_c1 3300050509 Bacteria 8395
103 nmdc:mga06r32_29870_c1 3300050510 Bacteria 5112
104 Ga0500646_0001517 3300053090 Bacteria 6118
105 Ga0466962_0029274 3300061719 Bacteria 2636

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035083 Ga0373926_0005443 Ga0373926_0005443_252_1376 374
2 3300035692 Ga0373935_0076271 Ga0373935_0076271_838_1962 374
3 3300035725 Ga0373947_0000003 Ga0373947_0000003_290499_291623 374
4 3300044735 Ga0466968_0040175 Ga0466968_0040175_58_1182 374
5 3300046454 Ga0495592_0023566 Ga0495592_0023566_3461_4636 379
6 3300046459 Ga0495629_0141883 Ga0495629_0141883_182_1357 379
7 3300046499 Ga0495594_0074177 Ga0495594_0074177_180_1355 379
8 3300046514 Ga0495618_0052659 Ga0495618_0052659_47_1222 379
9 3300046516 Ga0495628_0133043 Ga0495628_0133043_125_1300 379
10 3300046533 Ga0495640_0005115 Ga0495640_0005115_5092_6267 379
11 3300046559 Ga0495667_0032960 Ga0495667_0032960_59_1234 379
12 3300046642 Ga0495634_0004598 Ga0495634_0004598_1185_2360 379
13 3300046675 Ga0495657_0098886 Ga0495657_0098886_261_1436 379
14 3300046678 Ga0495599_0079485 Ga0495599_0079485_817_1989 379
15 3300046689 Ga0495613_0007864 Ga0495613_0007864_1720_2895 379
16 3300046690 Ga0495624_0065241 Ga0495624_0065241_1046_2221 379
17 3300046809 Ga0495600_0005180 Ga0495600_0005180_6499_7674 379
18 3300047317 Ga0495604_0056270 Ga0495604_0056270_134_1309 379
19 3300047321 Ga0495676_0001917 Ga0495676_0001917_5665_6840 379
20 3300049568 Ga0501031_0024863 Ga0501031_0024863_2692_3867 379
21 3300049569 Ga0501032_0002243 Ga0501032_0002243_12181_13356 379
22 3300049571 Ga0501034_0006136 Ga0501034_0006136_10018_11193 379
23 3300049572 Ga0501036_0003598 Ga0501036_0003598_5596_6771 379
24 3300049574 Ga0501038_0004121 Ga0501038_0004121_10172_11347 379
25 3300049575 Ga0501039_0274030 Ga0501039_0274030_25_1200 379
26 3300049579 Ga0501043_0094367 Ga0501043_0094367_113_1288 379
27 3300049580 Ga0501046_0201888 Ga0501046_0201888_259_1434 379
28 3300049581 Ga0501047_0010133 Ga0501047_0010133_47_1222 379
29 3300049822 Ga0501035_0110635 Ga0501035_0110635_260_1435 379
30 3300005347 Ga0070668_100000173 Ga0070668_10000017322 381
31 3300009147 Ga0114129_10017882 Ga0114129_100178823 382
32 3300009551 Ga0105238_10026504 Ga0105238_100265042 382
33 3300050509 nmdc:mga0qj67_17430_c1 nmdc:mga0qj67_17430_c1_1854_3002 382
34 3300050510 nmdc:mga06r32_29870_c1 nmdc:mga06r32_29870_c1_3092_4240 382
35 3300013297 Ga0157378_10054330 Ga0157378_100543302 384
36 3300049587 Ga0501071_0259620 Ga0501071_0259620_26_1189 385
37 3300049592 Ga0501076_0296252 Ga0501076_0296252_48_1211 385
38 iso_pu_bacteria 2585427649 2586058536 385
39 iso_pu_bacteria 2808606522 2809593127 385
40 3300031824 Ga0307413_10016437 Ga0307413_100164373 386
41 3300032126 Ga0307415_100187220 Ga0307415_1001872202 386
42 iso_pu_bacteria 8053945823 8053948440 386
43 3300006880 Ga0075429_100140709 Ga0075429_1001407092 387
44 3300050508 nmdc:mga09592_73443_c2 nmdc:mga09592_73443_c2_330_1511 387
45 iso_pu_bacteria 2515154137 2515757502 388
46 iso_pu_bacteria 2515154203 2516091741 388
47 iso_pu_bacteria 2831935698 2831939004 388
48 iso_pu_bacteria 8056207758 8056208080 388
49 3300003323 rootH1_10216226 rootH1_102162262 389
50 3300006846 Ga0075430_100000257 Ga0075430_1000002578 389
51 3300031838 Ga0307518_10000143 Ga0307518_1000014323 389
52 3300033179 Ga0307507_10063071 Ga0307507_100630712 389
53 3300033180 Ga0307510_10116186 Ga0307510_101161862 389
54 3300044658 Ga0466972_0019647 Ga0466972_0019647_1733_2902 389
55 3300044765 Ga0466970_0046725 Ga0466970_0046725_76_1245 389
56 3300048911 Ga0496108_0279417 Ga0496108_0279417_258_1427 389
57 3300048915 Ga0496112_0025305 Ga0496112_0025305_3904_5073 389
58 3300049580 Ga0501046_0106634 Ga0501046_0106634_121_1290 389
59 3300050509 nmdc:mga0qj67_6815_c1 nmdc:mga0qj67_6815_c1_6594_7766 389
60 iso_pu_bacteria 2515154088 2515496406 389
61 iso_pu_bacteria 2515154202 2516084956 389
62 iso_pu_bacteria 2643221548 2643765891 389
63 iso_pu_bacteria 2643221601 2644016030 389
64 iso_pu_bacteria 2643221631 2644176715 389
65 iso_pu_bacteria 2858902515 2858908399 389
66 iso_pu_bacteria 2895427314 2895427865 389
67 iso_pu_bacteria 2899359706 2899368482 389
68 iso_pu_bacteria 2870782633 2870786193 390
69 iso_pu_bacteria 8055172936 8055178056 390
70 3300005435 Ga0070714_100000076 Ga0070714_1000000762 392
71 3300005436 Ga0070713_100193879 Ga0070713_1001938792 392
72 3300005985 Ga0081539_10000197 Ga0081539_1000019750 392
73 3300025929 Ga0207664_10020409 Ga0207664_100204093 392
74 3300031456 Ga0307513_10121304 Ga0307513_101213042 392
75 3300003320 rootH2_10049014 rootH2_100490146 393
76 3300003320 rootH2_10140122 rootH2_101401222 393
77 3300005435 Ga0070714_100001066 Ga0070714_1000010668 393
78 3300006028 Ga0070717_10047414 Ga0070717_100474141 393
79 3300006028 Ga0070717_10058303 Ga0070717_100583032 393
80 3300006846 Ga0075430_100005775 Ga0075430_1000057753 393
81 3300006847 Ga0075431_100014990 Ga0075431_1000149905 393
82 3300006880 Ga0075429_100000772 Ga0075429_1000007725 393
83 3300013307 Ga0157372_10000652 Ga0157372_1000065218 393
84 3300020082 Ga0206353_11266848 Ga0206353_112668482 393
85 3300022467 Ga0224712_10000928 Ga0224712_100009282 393
86 3300025913 Ga0207695_10068025 Ga0207695_100680252 393
87 3300025929 Ga0207664_10000002 Ga0207664_10000002444 393
88 3300025929 Ga0207664_10000534 Ga0207664_100005344 393
89 3300030522 Ga0307512_10026073 Ga0307512_100260731 393
90 3300031090 Ga0265760_10008280 Ga0265760_100082802 393
91 3300031090 Ga0265760_10023818 Ga0265760_100238182 393
92 3300031616 Ga0307508_10123729 Ga0307508_101237292 393
93 3300035083 Ga0373926_0000488 Ga0373926_0000488_91_1275 393
94 3300035725 Ga0373947_0000003 Ga0373947_0000003_311730_312914 393
95 3300044656 Ga0466969_0013803 Ga0466969_0013803_2971_4152 393
96 3300044693 Ga0466961_0066304 Ga0466961_0066304_60_1241 393
97 3300044719 Ga0466971_0058158 Ga0466971_0058158_16_1197 393
98 3300044765 Ga0466970_0040336 Ga0466970_0040336_1091_2464 393
99 3300045049 Ga0466959_0078715 Ga0466959_0078715_866_2047 393
100 3300045836 Ga0466958_0038425 Ga0466958_0038425_1678_2859 393
101 3300046514 Ga0495618_0071396 Ga0495618_0071396_708_1901 393
102 3300046516 Ga0495628_0048526 Ga0495628_0048526_1255_2448 393
103 3300046529 Ga0495652_0006454 Ga0495652_0006454_8848_10041 393
104 3300046533 Ga0495640_0000119 Ga0495640_0000119_29720_30913 393
105 3300046616 Ga0495668_0003207 Ga0495668_0003207_28_1209 393
106 3300046642 Ga0495634_0041490 Ga0495634_0041490_1861_3054 393
107 3300046660 Ga0495625_0001705 Ga0495625_0001705_13100_14281 393
108 3300046675 Ga0495657_0003707 Ga0495657_0003707_2046_3239 393
109 3300046689 Ga0495613_0017799 Ga0495613_0017799_2060_3253 393
110 3300046690 Ga0495624_0045910 Ga0495624_0045910_1413_2606 393
111 3300047317 Ga0495604_0039001 Ga0495604_0039001_1019_2212 393
112 3300047321 Ga0495676_0000692 Ga0495676_0000692_21274_22467 393
113 3300048091 Ga0495626_0002557 Ga0495626_0002557_11265_12446 393
114 3300049568 Ga0501031_0069551 Ga0501031_0069551_39_1274 393
115 3300049569 Ga0501032_0004797 Ga0501032_0004797_4173_5408 393
116 3300049571 Ga0501034_0006992 Ga0501034_0006992_9029_10264 393
117 3300049572 Ga0501036_0110180 Ga0501036_0110180_68_1303 393
118 3300049574 Ga0501038_0040183 Ga0501038_0040183_1989_3224 393
119 3300049586 Ga0501070_0044993 Ga0501070_0044993_1637_2872 393
120 3300049822 Ga0501035_0014827 Ga0501035_0014827_3454_4689 393
121 3300050509 nmdc:mga0qj67_152614_c1 nmdc:mga0qj67_152614_c1_547_1731 393
122 3300053090 Ga0500646_0001517 Ga0500646_0001517_2727_3911 393
123 3300061719 Ga0466962_0029274 Ga0466962_0029274_487_1668 393

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

302

436

0.96

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

66

175

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f72-assembly1.cif.gz_A rv3094c in complex with fad and eth. 0.9613 12 393
7f74-assembly1.cif.gz_D rv3094c in complex with fmn. 0.9588 12 393
7f70-assembly1.cif.gz_A crystal structure of rv3094c 0.9564 11 393
7f72-assembly1.cif.gz_A rv3094c in complex with fad and eth. 0.9562 12 393
2jbt-assembly1.cif.gz_B structure of the monooxygenase component of p-hydroxyphenylacetate hydroxylase from acinetobacter baumannii 0.9537 13 393
ID Description Score Start End Superfamily
af_O05773_110_200_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.958 115 207 2.40.110.10
2jbrA02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9439 115 207 2.40.110.10
5lvwA02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9387 115 208 2.40.110.10
af_O05773_110_200_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9374 115 207 2.40.110.10
3afeD02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9338 114 208 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A6N7HNP9-F1-model_v4 Acyl-CoA dehydrogenase 0.9856 1 393 GO:0003995
GO:0005737
GO:0016712
GO:0033539
GO:0050660
AF-A0A6A0B2B1-F1-model_v4 Acyl-CoA dehydrogenase 0.9838 52 393 GO:0003995
GO:0005737
GO:0016712
GO:0033539
GO:0050660
AF-A0A0Q7MZ98-F1-model_v4 Acyl-CoA dehydrogenase 0.9811 1 393 GO:0006552
GO:0008470
GO:0050660
AF-A0A0Q7MZ98-F1-model_v4 Acyl-CoA dehydrogenase 0.9786 1 393 GO:0006552
GO:0008470
GO:0050660
AF-A0A6A0B2B1-F1-model_v4 Acyl-CoA dehydrogenase 0.9781 52 393 GO:0003995
GO:0005737
GO:0016712
GO:0033539
GO:0050660

Feature Viewer

pLDDT pTM Quality
94.32 0.93 High
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Predicted Structure (AlphaFold2)

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