F119517

General Info

Members Datasets Scaffolds Average Seq Length
123 70 246 504

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0007761|Ga0453684_0007761_17736_19355
Length 539
Sequence LKRYILTWLAGNPNIHESLVNDATSGKIASMLSRVYSCAVVGLEGVIVEVEVDFTNGLPGVTIVGLPDVAVQESRERVQTAIKNAGLHFPRHRIVVNLAPAVVRKEGPAYDLPIALGVVILAGYLPQDSIENSLVIGELSLDGVLRHTRGILPMAATARANGYKRMFVPEADAPEAALIPDLEIIPVKSLADLYAHLSGRQLIEPYQPSNDPLEPLFIPTDFAEVKGQEHVKRALEVAAAGGHNVLLVGSPGSGKTLLARAMPGILPEMNIDESLDVTRIYSVADQLPAGTPLIRHRPFRAPHHTISNAGLVGGGNIPKPGEISLAHRGVLFLDEFPEFNSRVLEVMRQPMEDKVVTISRAKGSLTFSANFQLIAAMNPCPCGYYGDSLKPCTCASVVVTKYQKRISGPLLDRIDIHVEVPRVDYEKLSGNKTSESSESIRGRVQTARNIQNERFTNGEAKDIICNADMRIGEVRKFCQLQDEGQSLMRSAMSQLQLSARAYHRILKLSRTIADLAGSKEIQSVHLAEALQYRPKLMIG

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
17 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
18 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
19 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
20 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
21 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
29 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
30 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
33 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
34 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
37 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
38 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
39 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
40 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
43 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
44 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
45 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
46 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
47 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
48 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
49 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
50 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
51 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
52 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
61 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
64 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
65 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
66 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
67 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
68 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
69 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
70 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.37
Metatranscriptomes 1.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.81
Rhizosphere 90.24
Stem 0
Stem Tuber 0
Unclassified 3.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0007761 3300044712 Bacteria 19573
2 JGI25406J46586_10000664 3300003203 Bacteria 16016
3 rootH1_10009846 3300003323 Bacteria 9779
4 Ga0070705_100006588 3300005440 Bacteria 5703
5 Ga0070708_100009743 3300005445 Bacteria 7756
6 Ga0070708_100023286 3300005445 Bacteria 5265
7 Ga0070707_100148996 3300005468 Bacteria 2278
8 Ga0070698_100010802 3300005471 Bacteria 9717
9 Ga0070698_100050943 3300005471 Bacteria 4218
10 Ga0070699_100006580 3300005518 Bacteria 10112
11 Ga0070699_100081664 3300005518 Bacteria 2818
12 Ga0068855_100014125 3300005563 Bacteria 9621
13 Ga0068857_100173924 3300005577 Bacteria 1958
14 Ga0081539_10003286 3300005985 Bacteria 20260
15 Ga0081539_10026693 3300005985 Bacteria 3676
16 Ga0081539_10048607 3300005985 Bacteria 2412
17 Ga0070717_10087188 3300006028 Bacteria 2628
18 Ga0075430_100157706 3300006846 Bacteria 1889
19 Ga0075429_100018939 3300006880 Bacteria 5963
20 Ga0114129_10008354 3300009147 Bacteria 14757
21 Ga0105238_10000274 3300009551 Bacteria 57393
22 Ga0105249_10111544 3300009553 Bacteria 2586
23 Ga0105239_10169497 3300010375 Unclassified 2441
24 Ga0206349_1617289 3300020075 Bacteria 3752
25 Ga0206350_11138219 3300020080 Bacteria 3094
26 Ga0213874_10000650 3300021377 Bacteria 7031
27 Ga0213874_10004819 3300021377 Bacteria 3113
28 Ga0213875_10007063 3300021388 Bacteria 5838
29 Ga0207684_10004236 3300025910 Bacteria 13612
30 Ga0207671_10014525 3300025914 Bacteria 6219
31 Ga0207646_10100873 3300025922 Bacteria 2588
32 Ga0207694_10000064 3300025924 Bacteria 137279
33 Ga0207667_10126982 3300025949 Unclassified 2627
34 Ga0265334_10016966 3300028573 Bacteria 3012
35 Ga0265318_10008797 3300028577 Bacteria 4473
36 Ga0265323_10005726 3300028653 Bacteria 5266
37 Ga0265338_10039024 3300028800 Bacteria 4488
38 Ga0265338_10064996 3300028800 Bacteria 3168
39 Ga0265330_10016517 3300031235 Bacteria 3405
40 Ga0265320_10048942 3300031240 Bacteria 2060
41 Ga0265340_10006661 3300031247 Bacteria 6332
42 Ga0265316_10002629 3300031344 Bacteria 18501
43 Ga0265342_10080222 3300031712 Bacteria 1886
44 Ga0265342_10105593 3300031712 Bacteria 1599
45 Ga0316576_10034610 3300031727 Bacteria 3601
46 Ga0316578_10030316 3300031728 Bacteria 3074
47 Ga0316577_10015461 3300031733 Bacteria 4199
48 Ga0316577_10025099 3300031733 Bacteria 3316
49 Ga0307410_10060434 3300031852 Bacteria 2590
50 Ga0307416_100004842 3300032002 Bacteria 8190
51 Ga0373933_0002580 3300035724 Bacteria 10148
52 Ga0316582_0103960 3300036647 Bacteria 1884
53 Ga0316584_0017822 3300036712 Bacteria 5114
54 Ga0316584_0071918 3300036712 Bacteria 2592
55 Ga0316584_0087101 3300036712 Bacteria 2338
56 Ga0395905_0089504 3300037471 Bacteria 2885
57 Ga0436364_0239390 3300037853 Bacteria 4033
58 Ga0436364_0698415 3300037853 Bacteria 7284
59 Ga0400489_56019 3300039093 Bacteria 1762
60 Ga0400489_59429 3300039093 Bacteria 2468
61 Ga0400489_92747 3300039093 Bacteria 2827
62 Ga0436363_0244151 3300039450 Bacteria 3708
63 Ga0436363_0332627 3300039450 Bacteria 30697
64 Ga0436362_1198497 3300039453 Bacteria 3142
65 Ga0451577_0000151 3300042876 Bacteria 153747
66 Ga0451577_0002848 3300042876 Bacteria 19886
67 Ga0451577_0005449 3300042876 Bacteria 13034
68 Ga0451577_0020208 3300042876 Bacteria 6115
69 Ga0453683_0000145 3300044673 Bacteria 104430
70 Ga0453683_0002222 3300044673 Bacteria 15362
71 Ga0453683_0008453 3300044673 Bacteria 6906
72 Ga0453683_0012299 3300044673 Bacteria 5610
73 Ga0453683_0022381 3300044673 Bacteria 4032
74 Ga0453683_0055706 3300044673 Unclassified 2475
75 Ga0453683_0086444 3300044673 Bacteria 1965
76 Ga0466965_0003226 3300044683 Bacteria 7132
77 Ga0466961_0057068 3300044693 Bacteria 2486
78 Ga0466961_0117203 3300044693 Bacteria 1673
79 Ga0453684_0000021 3300044712 Bacteria 873490
80 Ga0453684_0000157 3300044712 Bacteria 304259
81 Ga0453684_0000214 3300044712 Bacteria 251406
82 Ga0453684_0000424 3300044712 Bacteria 172336
83 Ga0453684_0000670 3300044712 Bacteria 122645
84 Ga0453684_0001537 3300044712 Bacteria 64502
85 Ga0453684_0001997 3300044712 Bacteria 52233
86 Ga0453684_0002206 3300044712 Bacteria 48402
87 Ga0453684_0003489 3300044712 Bacteria 35322
88 Ga0453684_0006468 3300044712 Bacteria 22236
89 Ga0453684_0006715 3300044712 Bacteria 21691
90 Ga0453684_0008685 3300044712 Bacteria 18072
91 Ga0453684_0012293 3300044712 Bacteria 14165
92 Ga0453684_0015985 3300044712 Bacteria 11794
93 Ga0453684_0027842 3300044712 Bacteria 8087
94 Ga0453684_0040198 3300044712 Bacteria 6358
95 Ga0453684_0076317 3300044712 Bacteria 4208
96 Ga0453684_0112548 3300044712 Bacteria 3304
97 Ga0453684_0247033 3300044712 Bacteria 2051
98 Ga0453684_0292203 3300044712 Bacteria 1855
99 Ga0466968_0000300 3300044735 Bacteria 15805
100 Ga0466970_0060175 3300044765 Bacteria 2034
101 Ga0466957_0094975 3300044842 Bacteria 1872
102 Ga0466960_0019783 3300044901 Bacteria 2972
103 Ga0466959_0009654 3300045049 Bacteria 6868
104 Ga0466959_0088502 3300045049 Bacteria 2226
105 Ga0451576_0000307 3300045051 Bacteria 118840
106 Ga0451576_0003296 3300045051 Bacteria 22421
107 Ga0451576_0088366 3300045051 Bacteria 3224
108 Ga0451576_0112144 3300045051 Bacteria 2838
109 Ga0496108_0008854 3300048911 Bacteria 8154
110 Ga0501034_0034641 3300049571 Bacteria 5120
111 Ga0501037_0031324 3300049573 Bacteria 3926
112 Ga0501074_0062640 3300049590 Bacteria 2679
113 Ga0501075_0071619 3300049591 Bacteria 2620
114 Ga0501076_0092728 3300049592 Bacteria 2430
115 Ga0501076_0104823 3300049592 Bacteria 2282
116 Ga0501044_0000762 3300049823 Bacteria 38971
117 nmdc:mga05p37_11514_c1 3300050507 Bacteria 10536
118 nmdc:mga05p37_5146_c1 3300050507 Bacteria 14995
119 nmdc:mga09592_2125_c1 3300050508 Bacteria 16003
120 nmdc:mga09592_46250_c1 3300050508 Unclassified 3666
121 nmdc:mga09592_50023_c1 3300050508 Bacteria 3525
122 nmdc:mga0qj67_141619_c1 3300050509 Bacteria 1950
123 nmdc:mga0a205_7294_c1 3300050515 Bacteria 10002
124 Ga0453684_0007761
125 JGI25406J46586_10000664
126 rootH1_10009846
127 Ga0070705_100006588
128 Ga0070708_100009743
129 Ga0070708_100023286
130 Ga0070707_100148996
131 Ga0070698_100010802
132 Ga0070698_100050943
133 Ga0070699_100006580
134 Ga0070699_100081664
135 Ga0068855_100014125
136 Ga0068857_100173924
137 Ga0081539_10003286
138 Ga0081539_10026693
139 Ga0081539_10048607
140 Ga0070717_10087188
141 Ga0075430_100157706
142 Ga0075429_100018939
143 Ga0114129_10008354
144 Ga0105238_10000274
145 Ga0105249_10111544
146 Ga0105239_10169497
147 Ga0206349_1617289
148 Ga0206350_11138219
149 Ga0213874_10000650
150 Ga0213874_10004819
151 Ga0213875_10007063
152 Ga0207684_10004236
153 Ga0207671_10014525
154 Ga0207646_10100873
155 Ga0207694_10000064
156 Ga0207667_10126982
157 Ga0265334_10016966
158 Ga0265318_10008797
159 Ga0265323_10005726
160 Ga0265338_10039024
161 Ga0265338_10064996
162 Ga0265330_10016517
163 Ga0265320_10048942
164 Ga0265340_10006661
165 Ga0265316_10002629
166 Ga0265342_10080222
167 Ga0265342_10105593
168 Ga0316576_10034610
169 Ga0316578_10030316
170 Ga0316577_10015461
171 Ga0316577_10025099
172 Ga0307410_10060434
173 Ga0307416_100004842
174 Ga0373933_0002580
175 Ga0316582_0103960
176 Ga0316584_0017822
177 Ga0316584_0071918
178 Ga0316584_0087101
179 Ga0395905_0089504
180 Ga0436364_0239390
181 Ga0436364_0698415
182 Ga0400489_56019
183 Ga0400489_59429
184 Ga0400489_92747
185 Ga0436363_0244151
186 Ga0436363_0332627
187 Ga0436362_1198497
188 Ga0451577_0000151
189 Ga0451577_0002848
190 Ga0451577_0005449
191 Ga0451577_0020208
192 Ga0453683_0000145
193 Ga0453683_0002222
194 Ga0453683_0008453
195 Ga0453683_0012299
196 Ga0453683_0022381
197 Ga0453683_0055706
198 Ga0453683_0086444
199 Ga0466965_0003226
200 Ga0466961_0057068
201 Ga0466961_0117203
202 Ga0453684_0000021
203 Ga0453684_0000157
204 Ga0453684_0000214
205 Ga0453684_0000424
206 Ga0453684_0000670
207 Ga0453684_0001537
208 Ga0453684_0001997
209 Ga0453684_0002206
210 Ga0453684_0003489
211 Ga0453684_0006468
212 Ga0453684_0006715
213 Ga0453684_0008685
214 Ga0453684_0012293
215 Ga0453684_0015985
216 Ga0453684_0027842
217 Ga0453684_0040198
218 Ga0453684_0076317
219 Ga0453684_0112548
220 Ga0453684_0247033
221 Ga0453684_0292203
222 Ga0466968_0000300
223 Ga0466970_0060175
224 Ga0466957_0094975
225 Ga0466960_0019783
226 Ga0466959_0009654
227 Ga0466959_0088502
228 Ga0451576_0000307
229 Ga0451576_0003296
230 Ga0451576_0088366
231 Ga0451576_0112144
232 Ga0496108_0008854
233 Ga0501034_0034641
234 Ga0501037_0031324
235 Ga0501074_0062640
236 Ga0501075_0071619
237 Ga0501076_0092728
238 Ga0501076_0104823
239 Ga0501044_0000762
240 nmdc:mga05p37_11514_c1
241 nmdc:mga05p37_5146_c1
242 nmdc:mga09592_2125_c1
243 nmdc:mga09592_46250_c1
244 nmdc:mga09592_50023_c1
245 nmdc:mga0qj67_141619_c1
246 nmdc:mga0a205_7294_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

221

428

0.98

PF13335

Mg_chelatase_C

Magnesium chelatase, subunit ChlI C-terminal

434

533

0.96

PF13541

ChlI

Subunit ChlI of Mg-chelatase

50

172

0.95

PF00493

MCM

MCM P-loop domain

313

423

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lkm-assembly1.cif.gz_B-2 rada bound to dtdp 0.8583 4 163
6wys-assembly2.cif.gz_B lon protease proteolytic domain 0.8571 4 165
5lkm-assembly1.cif.gz_C-2 rada bound to dtdp 0.854 1 163
6u5z-assembly1.cif.gz_A cryo-em structure of e. coli lona s679a 0.8498 3 165
3wu6-assembly1.cif.gz_A oxidized e.coli lon proteolytic domain 0.8483 2 165
ID Description Score Start End Superfamily
af_P9WPR1_187_501_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.949 188 505 3.40.50.300
af_P9WPR1_2_172_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9477 1 171 3.30.230.10
af_P9WPR1_187_501_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9432 188 505 3.40.50.300
af_P9WPR1_2_172_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9424 1 171 3.30.230.10
af_P22787_5_170_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9411 5 169 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A658NQD4-F1-model_v4 ATP-dependent protease 0.9881 290 388 GO:0003677
GO:0005524
GO:0006508
GO:0008233
GO:0032508
AF-A0A3M1HMB6-F1-model_v4 ATP-binding protein 0.9818 197 505 GO:0003677
GO:0005524
GO:0016887
GO:0032508
AF-A0A5D8Z5B5-F1-model_v4 ATP-dependent protease 0.98 2 169
AF-A0A7C3BIR3-F1-model_v4 YifB family Mg chelatase-like AAA ATPase 0.9771 1 504 GO:0005524
GO:0016887
AF-A0A3D2SQV1-F1-model_v4 Magnesium chelatase 0.9771 2 126

Map