F119340

General Info

Members Datasets Scaffolds Average Seq Length
123 96 246 311

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_1043531|Ga0436360_1043531_913_1914
Length 333
Sequence MPAFAGMTSKALMLSFLARRTVQSLIVVALMSFVVYGLIGLMPGDPIDLMISANPKLTSADAERLRAIYGVDKPILERYAAWARDALTGDFGYSRIYQRPVLEVLGPRLANTAKLMLAAFALSLSIGVALGIVAARRPGGALDTAVNLFAFISISMPTFWLALLLILVFAVTLGWLPAGGSAAQGSGLWDSLRYLVLPVATLTIAGSGSYARYTRASMLEALRQDWVRTARAKGAGRARVLVHHALRNAMIPVATIAALEFGSLFSGALITETMFAYPGMGKLIFDAVMGNDYNLALVGLLFATLLTLIGNLGADLAYAALDPRISYAGLERN

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
46 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
49 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
52 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
53 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
54 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
55 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
63 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
64 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
65 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
71 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
72 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
73 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
74 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
75 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
76 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
77 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
78 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
87 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
90 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
91 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
92 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
94 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
95 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
96 8015556637 Bdellovibrio reynosensis LBG001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.56
Metatranscriptomes 0
Isolates 2.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.81
Nodule 0
Rhizoplane 0.81
Rhizosphere 82.93
Stem 0
Stem Tuber 0
Unclassified 0.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_1043531 3300039438 Bacteria 2426
2 Ga0070680_100074398 3300005336 Bacteria 2795
3 Ga0070675_100349424 3300005354 Bacteria 1311
4 Ga0070671_100012787 3300005355 Bacteria 6768
5 Ga0070659_100107770 3300005366 Bacteria 2247
6 Ga0070714_100002143 3300005435 Bacteria 14516
7 Ga0070713_100167249 3300005436 Bacteria 1967
8 Ga0070705_100091696 3300005440 Bacteria 1895
9 Ga0070708_100024662 3300005445 Bacteria 5136
10 Ga0070681_10049651 3300005458 Bacteria 4189
11 Ga0070681_10052188 3300005458 Bacteria 4078
12 Ga0070706_100045104 3300005467 Bacteria 4072
13 Ga0070707_100010224 3300005468 Bacteria 8738
14 Ga0070698_100154362 3300005471 Bacteria 2242
15 Ga0070699_100030597 3300005518 Bacteria 4647
16 Ga0070679_100000421 3300005530 Bacteria 36015
17 Ga0070679_100477061 3300005530 Bacteria 1191
18 Ga0070684_100286369 3300005535 Bacteria 1510
19 Ga0070697_100423447 3300005536 Unclassified 1157
20 Ga0070704_100027204 3300005549 Bacteria 3790
21 Ga0068857_100093277 3300005577 Bacteria 2696
22 Ga0068856_100137138 3300005614 Bacteria 2452
23 Ga0081540_1009985 3300005983 Bacteria 6465
24 Ga0070712_100078937 3300006175 Bacteria 2378
25 Ga0070712_100444336 3300006175 Bacteria 1079
26 Ga0099795_10010374 3300007788 Bacteria 2741
27 Ga0105238_10280101 3300009551 Bacteria 1649
28 Ga0099796_10006728 3300010159 Bacteria 2962
29 Ga0099796_10015524 3300010159 Bacteria 2228
30 Ga0157370_10006714 3300013104 Bacteria 12626
31 Ga0157370_10081850 3300013104 Bacteria 3038
32 Ga0157369_10008390 3300013105 Bacteria 11849
33 Ga0213873_10018494 3300021358 Bacteria 1603
34 Ga0213875_10000527 3300021388 Bacteria 31621
35 Ga0213875_10000643 3300021388 Bacteria 27836
36 Ga0213875_10003130 3300021388 Bacteria 9520
37 Ga0213875_10003871 3300021388 Bacteria 8385
38 Ga0213875_10008568 3300021388 Bacteria 5228
39 Ga0207692_10042902 3300025898 Bacteria 2248
40 Ga0207684_10014635 3300025910 Bacteria 6759
41 Ga0207707_10015855 3300025912 Bacteria 6572
42 Ga0207707_10253238 3300025912 Bacteria 1529
43 Ga0207660_10118910 3300025917 Bacteria 1999
44 Ga0207652_10024671 3300025921 Bacteria 4990
45 Ga0207652_10546641 3300025921 Bacteria 1041
46 Ga0207659_10303991 3300025926 Bacteria 1311
47 Ga0207700_10087679 3300025928 Bacteria 2448
48 Ga0207700_10134293 3300025928 Bacteria 2025
49 Ga0207664_10003517 3300025929 Bacteria 10466
50 Ga0207651_10086384 3300025960 Bacteria 2280
51 Ga0207674_10054017 3300026116 Bacteria 4092
52 Ga0265326_10028507 3300028558 Bacteria 1591
53 Ga0265338_10010946 3300028800 Bacteria 10543
54 Ga0265330_10075845 3300031235 Bacteria 1452
55 Ga0265316_10023185 3300031344 Bacteria 5218
56 Ga0307513_10012935 3300031456 Bacteria 10261
57 Ga0265314_10160396 3300031711 Bacteria 1369
58 Ga0265342_10062329 3300031712 Bacteria 2195
59 Ga0316576_10024343 3300031727 Bacteria 4226
60 Ga0316577_10177922 3300031733 Bacteria 1201
61 Ga0373956_0083351 3300035119 Bacteria 1469
62 Ga0316574_0026236 3300035398 Bacteria 3503
63 Ga0373947_0038874 3300035725 Bacteria 2830
64 Ga0373937_0014707 3300036401 Bacteria 6911
65 Ga0373937_0114466 3300036401 Bacteria 2511
66 Ga0316582_0345252 3300036647 Bacteria 1024
67 Ga0316584_0077890 3300036712 Bacteria 2483
68 Ga0373925_0141163 3300037068 Bacteria 1885
69 Ga0395899_0043968 3300037312 Bacteria 3328
70 Ga0395898_0189986 3300037466 Bacteria 1962
71 Ga0395905_0011315 3300037471 Bacteria 8629
72 Ga0395905_0078490 3300037471 Bacteria 3094
73 Ga0436364_0075498 3300037853 Bacteria 1683
74 Ga0436364_0190224 3300037853 Bacteria 14772
75 Ga0436364_0752883 3300037853 Bacteria 33808
76 Ga0436364_0759666 3300037853 Bacteria 4169
77 Ga0436364_0858825 3300037853 Bacteria 170378
78 Ga0436364_1362512 3300037853 Bacteria 1430
79 Ga0436364_1454409 3300037853 Bacteria 11944
80 Ga0436364_1455316 3300037853 Bacteria 25171
81 Ga0395901_0004535 3300038443 Bacteria 14010
82 Ga0436365_0576516 3300039437 Bacteria 8043
83 Ga0436365_1100854 3300039437 Bacteria 2221
84 Ga0436360_0321428 3300039438 Bacteria 1662
85 Ga0436360_1361182 3300039438 Bacteria 3045
86 Ga0436363_0286392 3300039450 Bacteria 2121
87 Ga0436362_0057147 3300039453 Bacteria 7942
88 Ga0439450_021975 3300042008 Bacteria 1374
89 Ga0466972_0099130 3300044658 Bacteria 1379
90 Ga0466960_0090518 3300044901 Bacteria 1559
91 Ga0466967_0037617 3300045976 Bacteria 4143
92 Ga0466967_0650768 3300045976 Bacteria 1042
93 Ga0495592_0034270 3300046454 Bacteria 3828
94 Ga0495580_0286257 3300046472 Bacteria 1124
95 Ga0495639_0042768 3300046475 Bacteria 2045
96 Ga0495618_0277316 3300046514 Bacteria 1046
97 Ga0495640_0060681 3300046533 Bacteria 2571
98 Ga0495667_0008364 3300046559 Bacteria 7021
99 Ga0495667_0285710 3300046559 Bacteria 1047
100 Ga0495656_0003962 3300046615 Bacteria 5031
101 Ga0495635_0022239 3300046663 Bacteria 4416
102 Ga0495599_0098825 3300046678 Bacteria 1819
103 Ga0495600_0033579 3300046809 Bacteria 3331
104 Ga0495636_0007385 3300047318 Bacteria 4325
105 Ga0495680_0026365 3300047322 Bacteria 4792
106 Ga0496110_0434203 3300048913 Bacteria 1197
107 Ga0501034_0121689 3300049571 Bacteria 2596
108 Ga0501043_0155263 3300049579 Bacteria 1790
109 Ga0501047_0300981 3300049581 Bacteria 1446
110 Ga0501067_0228322 3300049583 Bacteria 1036
111 Ga0501080_0385621 3300049742 Bacteria 1262
112 Ga0501080_0613190 3300049742 Bacteria 965
113 Ga0501083_0046446 3300049744 Bacteria 2936
114 Ga0501045_0222582 3300049824 Bacteria 1405
115 nmdc:mga08y16_332228_c1 3300050511 Bacteria 1563
116 nmdc:mga0sz30_150140_c1 3300050516 Bacteria 1031
117 Ga0495601_0042092 3300053077 Bacteria 2864
118 Ga0495595_0015099 3300053084 Bacteria 3289
119 Ga0495619_0012583 3300053085 Bacteria 5326
120 Ga0501084_0384480 3300054114 Bacteria 1186
121 2857470281 2857465823 Bacteria 6772595
122 2857592419 2857591370 Bacteria 6569758
123 8015557169 8015556637 Bacteria 3582323
124 Ga0436360_1043531
125 Ga0070680_100074398
126 Ga0070675_100349424
127 Ga0070671_100012787
128 Ga0070659_100107770
129 Ga0070714_100002143
130 Ga0070713_100167249
131 Ga0070705_100091696
132 Ga0070708_100024662
133 Ga0070681_10049651
134 Ga0070681_10052188
135 Ga0070706_100045104
136 Ga0070707_100010224
137 Ga0070698_100154362
138 Ga0070699_100030597
139 Ga0070679_100000421
140 Ga0070679_100477061
141 Ga0070684_100286369
142 Ga0070697_100423447
143 Ga0070704_100027204
144 Ga0068857_100093277
145 Ga0068856_100137138
146 Ga0081540_1009985
147 Ga0070712_100078937
148 Ga0070712_100444336
149 Ga0099795_10010374
150 Ga0105238_10280101
151 Ga0099796_10006728
152 Ga0099796_10015524
153 Ga0157370_10006714
154 Ga0157370_10081850
155 Ga0157369_10008390
156 Ga0213873_10018494
157 Ga0213875_10000527
158 Ga0213875_10000643
159 Ga0213875_10003130
160 Ga0213875_10003871
161 Ga0213875_10008568
162 Ga0207692_10042902
163 Ga0207684_10014635
164 Ga0207707_10015855
165 Ga0207707_10253238
166 Ga0207660_10118910
167 Ga0207652_10024671
168 Ga0207652_10546641
169 Ga0207659_10303991
170 Ga0207700_10087679
171 Ga0207700_10134293
172 Ga0207664_10003517
173 Ga0207651_10086384
174 Ga0207674_10054017
175 Ga0265326_10028507
176 Ga0265338_10010946
177 Ga0265330_10075845
178 Ga0265316_10023185
179 Ga0307513_10012935
180 Ga0265314_10160396
181 Ga0265342_10062329
182 Ga0316576_10024343
183 Ga0316577_10177922
184 Ga0373956_0083351
185 Ga0316574_0026236
186 Ga0373947_0038874
187 Ga0373937_0014707
188 Ga0373937_0114466
189 Ga0316582_0345252
190 Ga0316584_0077890
191 Ga0373925_0141163
192 Ga0395899_0043968
193 Ga0395898_0189986
194 Ga0395905_0011315
195 Ga0395905_0078490
196 Ga0436364_0075498
197 Ga0436364_0190224
198 Ga0436364_0752883
199 Ga0436364_0759666
200 Ga0436364_0858825
201 Ga0436364_1362512
202 Ga0436364_1454409
203 Ga0436364_1455316
204 Ga0395901_0004535
205 Ga0436365_0576516
206 Ga0436365_1100854
207 Ga0436360_0321428
208 Ga0436360_1361182
209 Ga0436363_0286392
210 Ga0436362_0057147
211 Ga0439450_021975
212 Ga0466972_0099130
213 Ga0466960_0090518
214 Ga0466967_0037617
215 Ga0466967_0650768
216 Ga0495592_0034270
217 Ga0495580_0286257
218 Ga0495639_0042768
219 Ga0495618_0277316
220 Ga0495640_0060681
221 Ga0495667_0008364
222 Ga0495667_0285710
223 Ga0495656_0003962
224 Ga0495635_0022239
225 Ga0495599_0098825
226 Ga0495600_0033579
227 Ga0495636_0007385
228 Ga0495680_0026365
229 Ga0496110_0434203
230 Ga0501034_0121689
231 Ga0501043_0155263
232 Ga0501047_0300981
233 Ga0501067_0228322
234 Ga0501080_0385621
235 Ga0501080_0613190
236 Ga0501083_0046446
237 Ga0501045_0222582
238 nmdc:mga08y16_332228_c1
239 nmdc:mga0sz30_150140_c1
240 Ga0495601_0042092
241 Ga0495595_0015099
242 Ga0495619_0012583
243 Ga0501084_0384480
244 2857470281
245 2857592419
246 8015557169

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

127

327

0.99

PF19300

BPD_transp_1_N

Binding-prot-dependent transport system membrane comp, N-term

13

116

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8559 90 311
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.833 92 311
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.83 90 311
3dhw-assembly1.cif.gz_A crystal structure of methionine importer metni 0.8276 92 302
4ymu-assembly1.cif.gz_C crystal structure of an amino acid abc transporter complex with arginines and atps 0.8261 90 309
ID Description Score Start End Superfamily
af_P33591_90_303_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.947 90 311 1.10.3720.10
af_P0AFH2_84_300_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9419 89 309 1.10.3720.10
af_Q2FZR7_83_297_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.94 87 309 1.10.3720.10
af_P33591_90_303_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9386 90 311 1.10.3720.10
af_P75798_87_300_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9346 90 311 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A5D0MVN6-F1-model_v4 ABC transporter permease 0.9592 1 313 GO:0005886
GO:0055085
AF-A0A838IUF0-F1-model_v4 ABC transporter permease 0.9591 1 313 GO:0005886
GO:0055085
AF-D4J4K6-F1-model_v4 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 0.9582 1 316 GO:0005886
GO:0055085
AF-A0A3G1KXG7-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.958 1 315 GO:0005886
GO:0055085
AF-A0A399ESL9-F1-model_v4 Dipeptide transport system permease protein DppB 0.9567 1 313 GO:0005886
GO:0071916

Map