F119037
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 123 | 50 | 246 | 371 |
Family's Representative Sequence
| Representative Sequence | 3300031727|Ga0316576_10155019|Ga0316576_101550192 |
| Length | 412 |
| Sequence | MKKLYLTLVAVVVVLLGFYLVRNTGAKTDEKMETQPVMTQTAVFAGGCFWCTESDFEKVDGVIEAISGYTGGHVANPTYEQVSAGGTGHVEAVKVIYDPAKITYEQLLDVFWRHVDPTDAGGQFVDRGSQYRSVIFYANDKEREMAEVSKKALMASGRFDKPIVTEILPLGVFYPAEDYHQDYYKKNPIRYHWYRSGSGRDQFLEKVWGDAKSMVNPKEKGKMTNATEENGMTEGAMTDKKGNGMAPALVMKTGMEQGHVTAAKTGDDYKVPSDKELRRELTPLQYEVTRQNGTEPPFNNEYWNNHEAGIYVDIISGEPLFSSTDKFESGTGWPSFTRPLEPENVVEKTDRSFLMVRTEVRSKHADSHLGHLFNDGPEPTGLRYCINSASLRFISAADLEKEGYGKYRKLFE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 2 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 3 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 5 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 6 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 7 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 8 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 9 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 10 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 11 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 12 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 13 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 14 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 15 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 16 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 17 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 18 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 19 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 20 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 21 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 22 | 3300033524 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 23 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 24 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 25 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 26 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 27 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 28 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 29 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 30 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 31 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 32 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 33 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 34 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 35 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 36 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 37 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 38 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 39 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 40 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 41 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 42 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 43 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 44 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 45 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 46 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 47 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 48 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 49 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 50 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.56 |
| Metatranscriptomes | 2.44 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 81.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0316576_10155019 | 3300031727 | Bacteria | 1726 |
| 2 | Ga0070680_100008139 | 3300005336 | Bacteria | 8010 |
| 3 | Ga0070696_100018412 | 3300005546 | Bacteria | 4720 |
| 4 | Ga0075434_100029811 | 3300006871 | Bacteria | 5370 |
| 5 | Ga0075429_100296332 | 3300006880 | Bacteria | 1416 |
| 6 | Ga0075435_100447593 | 3300007076 | Bacteria | 1114 |
| 7 | Ga0224712_10101708 | 3300022467 | Bacteria | 1220 |
| 8 | Ga0207660_10024873 | 3300025917 | Bacteria | 4057 |
| 9 | Ga0265323_10037086 | 3300028653 | Bacteria | 1788 |
| 10 | Ga0265330_10057355 | 3300031235 | Bacteria | 1699 |
| 11 | Ga0265332_10078233 | 3300031238 | Bacteria | 1404 |
| 12 | Ga0265316_10001658 | 3300031344 | Bacteria | 23700 |
| 13 | Ga0265316_10018587 | 3300031344 | Bacteria | 5969 |
| 14 | Ga0265316_10024249 | 3300031344 | Bacteria | 5089 |
| 15 | Ga0265316_10109118 | 3300031344 | Bacteria | 2097 |
| 16 | Ga0265316_10146331 | 3300031344 | Bacteria | 1772 |
| 17 | Ga0316575_10002035 | 3300031665 | Bacteria | 6724 |
| 18 | Ga0316575_10011594 | 3300031665 | Bacteria | 3264 |
| 19 | Ga0316575_10015106 | 3300031665 | Bacteria | 2908 |
| 20 | Ga0316575_10054393 | 3300031665 | Bacteria | 1594 |
| 21 | Ga0316579_10000740 | 3300031691 | Bacteria | 11173 |
| 22 | Ga0265342_10000089 | 3300031712 | Bacteria | 99433 |
| 23 | Ga0265342_10072363 | 3300031712 | Bacteria | 2007 |
| 24 | Ga0316576_10002918 | 3300031727 | Bacteria | 9890 |
| 25 | Ga0316576_10005459 | 3300031727 | Bacteria | 7773 |
| 26 | Ga0316576_10006631 | 3300031727 | Bacteria | 7230 |
| 27 | Ga0316576_10009523 | 3300031727 | Bacteria | 6275 |
| 28 | Ga0316576_10016249 | 3300031727 | Bacteria | 5022 |
| 29 | Ga0316576_10042964 | 3300031727 | Bacteria | 3259 |
| 30 | Ga0316576_10052664 | 3300031727 | Bacteria | 2964 |
| 31 | Ga0316578_10004319 | 3300031728 | Bacteria | 6686 |
| 32 | Ga0316578_10007567 | 3300031728 | Bacteria | 5456 |
| 33 | Ga0316578_10016935 | 3300031728 | Bacteria | 3955 |
| 34 | Ga0316578_10045662 | 3300031728 | Bacteria | 2551 |
| 35 | Ga0316577_10000588 | 3300031733 | Bacteria | 14923 |
| 36 | Ga0316577_10004316 | 3300031733 | Bacteria | 7326 |
| 37 | Ga0316577_10019017 | 3300031733 | Bacteria | 3800 |
| 38 | Ga0316577_10031396 | 3300031733 | Bacteria | 2968 |
| 39 | Ga0316577_10038765 | 3300031733 | Bacteria | 2666 |
| 40 | Ga0316577_10134518 | 3300031733 | Bacteria | 1391 |
| 41 | Ga0316583_10006902 | 3300032133 | Bacteria | 4087 |
| 42 | Ga0316583_10040405 | 3300032133 | Bacteria | 1651 |
| 43 | Ga0316583_10053351 | 3300032133 | Bacteria | 1422 |
| 44 | Ga0316585_10000616 | 3300032137 | Bacteria | 8742 |
| 45 | Ga0316585_10001212 | 3300032137 | Bacteria | 6749 |
| 46 | Ga0316585_10005253 | 3300032137 | Bacteria | 3650 |
| 47 | Ga0316585_10005459 | 3300032137 | Bacteria | 3588 |
| 48 | Ga0316585_10008717 | 3300032137 | Bacteria | 2947 |
| 49 | Ga0316585_10035808 | 3300032137 | Bacteria | 1572 |
| 50 | Ga0316580_10012064 | 3300032139 | Bacteria | 2628 |
| 51 | Ga0316580_10019979 | 3300032139 | Bacteria | 2061 |
| 52 | Ga0316593_10064717 | 3300032168 | Bacteria | 1256 |
| 53 | Ga0316592_1003862 | 3300033524 | Bacteria | 2747 |
| 54 | Ga0316574_0005290 | 3300035398 | Bacteria | 6876 |
| 55 | Ga0316574_0016824 | 3300035398 | Bacteria | 4267 |
| 56 | Ga0316574_0022139 | 3300035398 | Bacteria | 3782 |
| 57 | Ga0316574_0026747 | 3300035398 | Bacteria | 3471 |
| 58 | Ga0316574_0036968 | 3300035398 | Bacteria | 2992 |
| 59 | Ga0316574_0067304 | 3300035398 | Bacteria | 2258 |
| 60 | Ga0316574_0086760 | 3300035398 | Bacteria | 1992 |
| 61 | Ga0316582_0001805 | 3300036647 | Bacteria | 9666 |
| 62 | Ga0316582_0003234 | 3300036647 | Bacteria | 7933 |
| 63 | Ga0316582_0003429 | 3300036647 | Bacteria | 7775 |
| 64 | Ga0316582_0068319 | 3300036647 | Bacteria | 2294 |
| 65 | Ga0316584_0003827 | 3300036712 | Bacteria | 9864 |
| 66 | Ga0316584_0018410 | 3300036712 | Bacteria | 5039 |
| 67 | Ga0316584_0020449 | 3300036712 | Bacteria | 4799 |
| 68 | Ga0316584_0045816 | 3300036712 | Bacteria | 3265 |
| 69 | Ga0316584_0097435 | 3300036712 | Bacteria | 2202 |
| 70 | Ga0316584_0124628 | 3300036712 | Bacteria | 1924 |
| 71 | Ga0316584_0240623 | 3300036712 | Bacteria | 1324 |
| 72 | Ga0316581_0057111 | 3300037588 | Bacteria | 1197 |
| 73 | Ga0400484_22909 | 3300038725 | Bacteria | 5042 |
| 74 | Ga0400484_34131 | 3300038725 | Bacteria | 5905 |
| 75 | Ga0400490_26627 | 3300038726 | Bacteria | 28534 |
| 76 | Ga0400490_58585 | 3300038726 | Bacteria | 4723 |
| 77 | Ga0400491_01496 | 3300038727 | Bacteria | 1510 |
| 78 | Ga0400491_05483 | 3300038727 | Bacteria | 2929 |
| 79 | Ga0400485_07309 | 3300038735 | Bacteria | 7362 |
| 80 | Ga0400485_11910 | 3300038735 | Bacteria | 25463 |
| 81 | Ga0400488_08681 | 3300038741 | Bacteria | 8391 |
| 82 | Ga0400488_11610 | 3300038741 | Bacteria | 38726 |
| 83 | Ga0400488_12017 | 3300038741 | Bacteria | 3279 |
| 84 | Ga0400488_22628 | 3300038741 | Bacteria | 11778 |
| 85 | Ga0400486_05363 | 3300038742 | Bacteria | 23942 |
| 86 | Ga0400486_13408 | 3300038742 | Bacteria | 20172 |
| 87 | Ga0400486_30614 | 3300038742 | Bacteria | 15952 |
| 88 | Ga0400483_016956 | 3300039062 | Bacteria | 2354 |
| 89 | Ga0400483_138675 | 3300039062 | Bacteria | 2747 |
| 90 | Ga0400489_18151 | 3300039093 | Bacteria | 3317 |
| 91 | Ga0400489_70216 | 3300039093 | Bacteria | 26929 |
| 92 | Ga0400489_96138 | 3300039093 | Bacteria | 11493 |
| 93 | Ga0400487_46552 | 3300039110 | Bacteria | 3300 |
| 94 | Ga0400487_53901 | 3300039110 | Bacteria | 4047 |
| 95 | Ga0400487_54202 | 3300039110 | Bacteria | 2117 |
| 96 | Ga0451577_0005137 | 3300042876 | Bacteria | 13477 |
| 97 | Ga0451577_0010578 | 3300042876 | Bacteria | 8799 |
| 98 | Ga0451577_0022735 | 3300042876 | Bacteria | 5724 |
| 99 | Ga0451577_0157320 | 3300042876 | Bacteria | 2046 |
| 100 | Ga0453683_0008305 | 3300044673 | Bacteria | 6979 |
| 101 | Ga0453683_0008309 | 3300044673 | Bacteria | 6977 |
| 102 | Ga0453683_0030608 | 3300044673 | Bacteria | 3402 |
| 103 | Ga0453683_0042217 | 3300044673 | Bacteria | 2863 |
| 104 | Ga0453684_0001546 | 3300044712 | Bacteria | 64283 |
| 105 | Ga0453684_0003687 | 3300044712 | Bacteria | 33962 |
| 106 | Ga0453684_0016900 | 3300044712 | Bacteria | 11354 |
| 107 | Ga0453684_0049606 | 3300044712 | Bacteria | 5533 |
| 108 | Ga0453684_0185539 | 3300044712 | Bacteria | 2438 |
| 109 | Ga0453684_0300134 | 3300044712 | Bacteria | 1826 |
| 110 | Ga0451576_0000021 | 3300045051 | Bacteria | 505854 |
| 111 | Ga0451576_0000244 | 3300045051 | Bacteria | 133298 |
| 112 | Ga0451576_0003294 | 3300045051 | Bacteria | 22423 |
| 113 | Ga0501031_0042046 | 3300049568 | Bacteria | 2984 |
| 114 | Ga0501036_0225093 | 3300049572 | Bacteria | 1574 |
| 115 | Ga0501039_0036052 | 3300049575 | Bacteria | 3816 |
| 116 | Ga0501068_0291314 | 3300049584 | Bacteria | 1044 |
| 117 | Ga0501075_0134197 | 3300049591 | Bacteria | 1885 |
| 118 | Ga0501076_0019040 | 3300049592 | Bacteria | 5238 |
| 119 | Ga0501080_0100258 | 3300049742 | Bacteria | 2687 |
| 120 | nmdc:mga0n895_40227_c1 | 3300050512 | Bacteria | 4541 |
| 121 | nmdc:mga0rr50_12665_c1 | 3300050513 | Bacteria | 5460 |
| 122 | Ga0501084_0440858 | 3300054114 | Bacteria | 1101 |
| 123 | Ga0501082_0047974 | 3300060353 | Bacteria | 3681 |
| 124 | Ga0316576_10155019 | |||
| 125 | Ga0070680_100008139 | |||
| 126 | Ga0070696_100018412 | |||
| 127 | Ga0075434_100029811 | |||
| 128 | Ga0075429_100296332 | |||
| 129 | Ga0075435_100447593 | |||
| 130 | Ga0224712_10101708 | |||
| 131 | Ga0207660_10024873 | |||
| 132 | Ga0265323_10037086 | |||
| 133 | Ga0265330_10057355 | |||
| 134 | Ga0265332_10078233 | |||
| 135 | Ga0265316_10001658 | |||
| 136 | Ga0265316_10018587 | |||
| 137 | Ga0265316_10024249 | |||
| 138 | Ga0265316_10109118 | |||
| 139 | Ga0265316_10146331 | |||
| 140 | Ga0316575_10002035 | |||
| 141 | Ga0316575_10011594 | |||
| 142 | Ga0316575_10015106 | |||
| 143 | Ga0316575_10054393 | |||
| 144 | Ga0316579_10000740 | |||
| 145 | Ga0265342_10000089 | |||
| 146 | Ga0265342_10072363 | |||
| 147 | Ga0316576_10002918 | |||
| 148 | Ga0316576_10005459 | |||
| 149 | Ga0316576_10006631 | |||
| 150 | Ga0316576_10009523 | |||
| 151 | Ga0316576_10016249 | |||
| 152 | Ga0316576_10042964 | |||
| 153 | Ga0316576_10052664 | |||
| 154 | Ga0316578_10004319 | |||
| 155 | Ga0316578_10007567 | |||
| 156 | Ga0316578_10016935 | |||
| 157 | Ga0316578_10045662 | |||
| 158 | Ga0316577_10000588 | |||
| 159 | Ga0316577_10004316 | |||
| 160 | Ga0316577_10019017 | |||
| 161 | Ga0316577_10031396 | |||
| 162 | Ga0316577_10038765 | |||
| 163 | Ga0316577_10134518 | |||
| 164 | Ga0316583_10006902 | |||
| 165 | Ga0316583_10040405 | |||
| 166 | Ga0316583_10053351 | |||
| 167 | Ga0316585_10000616 | |||
| 168 | Ga0316585_10001212 | |||
| 169 | Ga0316585_10005253 | |||
| 170 | Ga0316585_10005459 | |||
| 171 | Ga0316585_10008717 | |||
| 172 | Ga0316585_10035808 | |||
| 173 | Ga0316580_10012064 | |||
| 174 | Ga0316580_10019979 | |||
| 175 | Ga0316593_10064717 | |||
| 176 | Ga0316592_1003862 | |||
| 177 | Ga0316574_0005290 | |||
| 178 | Ga0316574_0016824 | |||
| 179 | Ga0316574_0022139 | |||
| 180 | Ga0316574_0026747 | |||
| 181 | Ga0316574_0036968 | |||
| 182 | Ga0316574_0067304 | |||
| 183 | Ga0316574_0086760 | |||
| 184 | Ga0316582_0001805 | |||
| 185 | Ga0316582_0003234 | |||
| 186 | Ga0316582_0003429 | |||
| 187 | Ga0316582_0068319 | |||
| 188 | Ga0316584_0003827 | |||
| 189 | Ga0316584_0018410 | |||
| 190 | Ga0316584_0020449 | |||
| 191 | Ga0316584_0045816 | |||
| 192 | Ga0316584_0097435 | |||
| 193 | Ga0316584_0124628 | |||
| 194 | Ga0316584_0240623 | |||
| 195 | Ga0316581_0057111 | |||
| 196 | Ga0400484_22909 | |||
| 197 | Ga0400484_34131 | |||
| 198 | Ga0400490_26627 | |||
| 199 | Ga0400490_58585 | |||
| 200 | Ga0400491_01496 | |||
| 201 | Ga0400491_05483 | |||
| 202 | Ga0400485_07309 | |||
| 203 | Ga0400485_11910 | |||
| 204 | Ga0400488_08681 | |||
| 205 | Ga0400488_11610 | |||
| 206 | Ga0400488_12017 | |||
| 207 | Ga0400488_22628 | |||
| 208 | Ga0400486_05363 | |||
| 209 | Ga0400486_13408 | |||
| 210 | Ga0400486_30614 | |||
| 211 | Ga0400483_016956 | |||
| 212 | Ga0400483_138675 | |||
| 213 | Ga0400489_18151 | |||
| 214 | Ga0400489_70216 | |||
| 215 | Ga0400489_96138 | |||
| 216 | Ga0400487_46552 | |||
| 217 | Ga0400487_53901 | |||
| 218 | Ga0400487_54202 | |||
| 219 | Ga0451577_0005137 | |||
| 220 | Ga0451577_0010578 | |||
| 221 | Ga0451577_0022735 | |||
| 222 | Ga0451577_0157320 | |||
| 223 | Ga0453683_0008305 | |||
| 224 | Ga0453683_0008309 | |||
| 225 | Ga0453683_0030608 | |||
| 226 | Ga0453683_0042217 | |||
| 227 | Ga0453684_0001546 | |||
| 228 | Ga0453684_0003687 | |||
| 229 | Ga0453684_0016900 | |||
| 230 | Ga0453684_0049606 | |||
| 231 | Ga0453684_0185539 | |||
| 232 | Ga0453684_0300134 | |||
| 233 | Ga0451576_0000021 | |||
| 234 | Ga0451576_0000244 | |||
| 235 | Ga0451576_0003294 | |||
| 236 | Ga0501031_0042046 | |||
| 237 | Ga0501036_0225093 | |||
| 238 | Ga0501039_0036052 | |||
| 239 | Ga0501068_0291314 | |||
| 240 | Ga0501075_0134197 | |||
| 241 | Ga0501076_0019040 | |||
| 242 | Ga0501080_0100258 | |||
| 243 | nmdc:mga0n895_40227_c1 | |||
| 244 | nmdc:mga0rr50_12665_c1 | |||
| 245 | Ga0501084_0440858 | |||
| 246 | Ga0501082_0047974 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6q9v-assembly1.cif.gz_A | msrb3 | 0.9864 | 204 | 327 |
| 7cto-assembly1.cif.gz_A | staphylococcus aureus msrb | 0.986 | 213 | 337 |
| 1l1d-assembly2.cif.gz_B | crystal structure of the c-terminal methionine sulfoxide reductase domain (msrb) of n. gonorrhoeae pilb | 0.9849 | 202 | 341 |
| 6sym-assembly2.cif.gz_B | crystal structure of escherichia coli msrb (reduced form) | 0.9828 | 203 | 327 |
| 3hch-assembly1.cif.gz_A | structure of the c-terminal domain (msrb) of neisseria meningitidis pilb (complex with substrate) | 0.9822 | 202 | 342 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0A084_1_166_3.30.1060.10 | Alpha Beta;2-Layer Sandwich;Peptide Methionine Sulfoxide Reductase; Chain A;Peptide methionine sulphoxide reductase MsrA | 0.9824 | 14 | 169 | 3.30.1060.10 |
| af_P34436_5_152_2.170.150.20 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. | 0.9821 | 204 | 327 | 2.170.150.20 |
| 3cezB00 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. | 0.9792 | 202 | 327 | 2.170.150.20 |
| af_P0A086_1_166_3.30.1060.10 | Alpha Beta;2-Layer Sandwich;Peptide Methionine Sulfoxide Reductase; Chain A;Peptide methionine sulphoxide reductase MsrA | 0.9766 | 14 | 173 | 3.30.1060.10 |
| af_Q551H3_1_147_3.30.1060.10 | Alpha Beta;2-Layer Sandwich;Peptide Methionine Sulfoxide Reductase; Chain A;Peptide methionine sulphoxide reductase MsrA | 0.9761 | 15 | 159 | 3.30.1060.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-M5Q3U5-F1-model_v4 | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) | 1.001 | 202 | 344 |
GO:0005737
GO:0006979 GO:0030091 GO:0033743 |
| AF-A0A842J7Q6-F1-model_v4 | peptide-methionine (R)-S-oxide reductase (EC 1.8.4.12) | 0.9983 | 203 | 345 |
GO:0005737
GO:0006979 GO:0030091 GO:0033743 |
| AF-A0A833M4W7-F1-model_v4 | Multifunctional fusion protein [Includes: Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase) (EC 1.8.4.11) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase); Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase)] | 0.9978 | 202 | 345 |
GO:0008113
GO:0033743 GO:0036211 |
| AF-A0A2N9NLN7-F1-model_v4 | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) | 0.9975 | 203 | 345 |
GO:0005737
GO:0006979 GO:0030091 GO:0033743 |
| AF-A0A388SFQ0-F1-model_v4 | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) | 0.9974 | 203 | 342 |
GO:0005737
GO:0006979 GO:0030091 GO:0033743 |