F115807

General Info

Members Datasets Scaffolds Average Seq Length
122 98 244 361

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0007863|Ga0496104_0007863_4369_5574
Length 401
Sequence VSADDRPTGDVRTAGERQAAAPNLPTMAGGRPGTSPVTRLPDFPWDSLLPARKVASEHPDGLVDLSVGTPVDRVPLPVRTALGDASEAPGYPMVHGTAAVRQAYSEWLSRAHGVADLDPANVLPTIGSKELVASLPTQLGLHAGDVVVIPELAYPTYEVGAIMAGATAIKADSLTALGPERVALIWINSPSNPTGRVLPVEHLAKIVGWARSRGTIVASDECYIDLGWESTPVSILHPDVCGGDHTNLLAVHSLSKRSNMAGYRAGFVSGDAKLVASLIAVRRHLGAMVPTPVQSAARAALADDGHVLAQRSRYGHRREVLSEVLDTAGFQVSGEAGLYLWCTRGEPAMRTVDWFADRGILVTPGSVYGTAGASHVRVALTASDERVNSAVTRLEGKSRRR

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
8 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
9 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
15 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
16 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
17 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
18 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
19 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
20 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
31 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
32 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
33 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
34 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
35 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
36 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
37 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
38 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
39 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
42 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
43 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
44 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
45 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
46 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
47 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
48 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
49 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
50 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
51 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
52 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
53 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
54 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
55 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
56 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
57 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
58 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
59 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
60 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
61 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
62 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
68 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
69 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
70 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
73 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
74 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
75 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
76 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
77 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
78 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
79 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
80 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
81 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
82 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
83 2643221590 Nocardioides sp. Root682 Isolate Unclassified
84 2643221615 Nocardioides sp. Root224 Isolate Unclassified
85 2643221617 Nocardioides sp. Root79 Isolate Unclassified
86 2643221620 Nocardioides sp. Root240 Isolate Unclassified
87 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
88 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
89 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
90 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
91 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
92 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
93 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
94 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
95 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
96 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
97 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
98 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.07
Metatranscriptomes 0
Isolates 13.93

Biome Distribution

Category Percentage (%)
Aerial Root 0.82
Bulb 0
Endosphere 10.66
Nodule 0
Rhizoplane 16.39
Rhizosphere 56.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0007863 3300048907 Bacteria 9452
2 LJQas_1004459 3300000549 Bacteria 1823
3 Ga0070668_100005724 3300005347 Bacteria 9215
4 Ga0070667_100004741 3300005367 Bacteria 11395
5 Ga0070663_100021538 3300005455 Bacteria 4290
6 Ga0070707_100381474 3300005468 Bacteria 1369
7 Ga0068864_100226038 3300005618 Bacteria 1729
8 Ga0068863_100060061 3300005841 Bacteria 3596
9 Ga0068862_100231742 3300005844 Bacteria 1676
10 Ga0081539_10022993 3300005985 Bacteria 4098
11 Ga0075365_10000511 3300006038 Bacteria 14787
12 Ga0075365_10016325 3300006038 Bacteria 4514
13 Ga0075363_100017467 3300006048 Bacteria 3559
14 Ga0075364_10002646 3300006051 Bacteria 10054
15 Ga0075364_10028060 3300006051 Bacteria 3601
16 Ga0075364_10065534 3300006051 Bacteria 2384
17 Ga0075369_10008715 3300006186 Bacteria 3915
18 Ga0105245_10290064 3300009098 Bacteria 1602
19 Ga0105243_10062516 3300009148 Bacteria 2981
20 Ga0157369_10270648 3300013105 Bacteria 1770
21 Ga0157372_10505416 3300013307 Bacteria 1409
22 Ga0157375_10105198 3300013308 Bacteria 2912
23 Ga0207694_10252721 3300025924 Bacteria 1443
24 Ga0207664_10090274 3300025929 Bacteria 2510
25 Ga0207644_10003464 3300025931 Bacteria 10198
26 Ga0207661_10364285 3300025944 Bacteria 1306
27 Ga0207658_10013296 3300025986 Bacteria 5621
28 Ga0207678_10327892 3300026067 Bacteria 1318
29 Ga0207708_10080513 3300026075 Bacteria 2502
30 Ga0207641_10009196 3300026088 Bacteria 8151
31 Ga0207683_10118004 3300026121 Bacteria 2380
32 Ga0207683_10135550 3300026121 Bacteria 2216
33 Ga0268264_10000943 3300028381 Bacteria 30160
34 Ga0307413_10030234 3300031824 Bacteria 3041
35 Ga0307407_10142084 3300031903 Bacteria 1550
36 Ga0307412_10065520 3300031911 Bacteria 2459
37 Ga0307409_100020834 3300031995 Bacteria 4479
38 Ga0307416_100009828 3300032002 Bacteria 6289
39 Ga0307416_100224995 3300032002 Bacteria 1803
40 Ga0307416_100377920 3300032002 Bacteria 1446
41 Ga0307414_10049396 3300032004 Bacteria 2909
42 Ga0307411_10044227 3300032005 Bacteria 2855
43 Ga0307415_100000584 3300032126 Bacteria 15884
44 Ga0307507_10013413 3300033179 Bacteria 9952
45 Ga0307507_10061394 3300033179 Bacteria 3500
46 Ga0307510_10099325 3300033180 Bacteria 2709
47 Ga0395901_0073490 3300038443 Bacteria 3566
48 Ga0439465_0002513 3300041413 Bacteria 5985
49 Ga0451793_0258702 3300041452 Bacteria 11484
50 Ga0451837_1393810 3300041494 Bacteria 1353
51 Ga0451841_0134561 3300041498 Bacteria 4664
52 Ga0451843_0004208 3300041509 Bacteria 1498
53 Ga0439431_0006364 3300041997 Bacteria 2610
54 Ga0466970_0009738 3300044765 Bacteria 4863
55 Ga0466970_0068452 3300044765 Bacteria 1907
56 Ga0466960_0000761 3300044901 Bacteria 11330
57 Ga0466960_0024231 3300044901 Bacteria 2736
58 Ga0466960_0062826 3300044901 Bacteria 1826
59 Ga0466960_0085009 3300044901 Bacteria 1602
60 Ga0466967_0386676 3300045976 Bacteria 1359
61 Ga0495665_0053884 3300046531 Bacteria 2126
62 Ga0495658_0151181 3300046683 Bacteria 1426
63 Ga0496101_0081718 3300048904 Bacteria 2391
64 Ga0496102_0023018 3300048905 Bacteria 5528
65 Ga0496102_0073980 3300048905 Bacteria 3131
66 Ga0496104_0043313 3300048907 Bacteria 4228
67 Ga0496104_0425981 3300048907 Bacteria 1239
68 Ga0496105_0114040 3300048908 Bacteria 2229
69 Ga0496106_0005157 3300048909 Bacteria 9680
70 Ga0496108_0022650 3300048911 Bacteria 5166
71 Ga0496108_0183004 3300048911 Bacteria 1815
72 Ga0496108_0258032 3300048911 Bacteria 1517
73 Ga0496109_0012982 3300048912 Bacteria 7200
74 Ga0496110_0013184 3300048913 Bacteria 6825
75 Ga0496111_0035108 3300048914 Bacteria 3582
76 Ga0496111_0042863 3300048914 Bacteria 3250
77 Ga0496113_0335969 3300048916 Bacteria 1212
78 Ga0496114_0065801 3300048917 Bacteria 3037
79 Ga0496114_0144037 3300048917 Bacteria 2065
80 Ga0496114_0324384 3300048917 Bacteria 1361
81 Ga0501034_0032244 3300049571 Bacteria 5322
82 Ga0501037_0001522 3300049573 Bacteria 16904
83 Ga0501038_0001706 3300049574 Bacteria 20407
84 Ga0501043_0000159 3300049579 Bacteria 61151
85 Ga0501043_0106071 3300049579 Bacteria 2207
86 Ga0501047_0029367 3300049581 Bacteria 5303
87 Ga0501047_0076720 3300049581 Bacteria 3216
88 Ga0501067_0032013 3300049583 Bacteria 2918
89 Ga0501068_0136140 3300049584 Bacteria 1538
90 Ga0501069_0040910 3300049585 Bacteria 2561
91 Ga0501069_0052667 3300049585 Bacteria 2267
92 Ga0501070_0000826 3300049586 Bacteria 28120
93 Ga0501070_0001567 3300049586 Bacteria 20327
94 Ga0501073_0031868 3300049589 Bacteria 3761
95 Ga0501074_0013489 3300049590 Bacteria 5942
96 Ga0501077_0135017 3300049593 Bacteria 1565
97 Ga0501044_0217265 3300049823 Bacteria 1863
98 nmdc:mga00v17_12524_c1 3300050491 Bacteria 4682
99 nmdc:mga00v17_2566_c1 3300050491 Bacteria 9326
100 nmdc:mga0sz30_947_c1 3300050516 Bacteria 8706
101 Ga0500556_0000182 3300053104 Bacteria 51372
102 Ga0500593_000576 3300053117 Bacteria 14111
103 Ga0500559_0013916 3300053136 Bacteria 3401
104 Ga0501082_0371255 3300060353 Bacteria 1248
105 Ga0530510_0245418 3300061734 Bacteria 1334
106 2552110370 2551306166 Bacteria 9731570
107 2643958819 2643221590 Bacteria 5214697
108 2644091631 2643221615 Bacteria 5487866
109 2644099384 2643221617 Bacteria 5139111
110 2644116422 2643221620 Bacteria 5134593
111 2644321434 2643221657 Bacteria 5490246
112 2644457864 2643221681 Bacteria 3707866
113 2644538332 2643221697 Bacteria 3575694
114 2739366174 2738543034 Bacteria 6084756
115 2791913968 2791354901 Bacteria 8322202
116 2795791557 2795385472 Bacteria 6627535
117 2812350062 2811994878 Bacteria 5992952
118 2899360195 2899359706 Bacteria 10940472
119 2917737514 2917736166 Bacteria 9690793
120 2974318235 2974315732 Bacteria 4602776
121 2984526447 2984523437 Bacteria 4508481
122 8003320446 8003314358 Bacteria 10575343
123 Ga0496104_0007863
124 LJQas_1004459
125 Ga0070668_100005724
126 Ga0070667_100004741
127 Ga0070663_100021538
128 Ga0070707_100381474
129 Ga0068864_100226038
130 Ga0068863_100060061
131 Ga0068862_100231742
132 Ga0081539_10022993
133 Ga0075365_10000511
134 Ga0075365_10016325
135 Ga0075363_100017467
136 Ga0075364_10002646
137 Ga0075364_10028060
138 Ga0075364_10065534
139 Ga0075369_10008715
140 Ga0105245_10290064
141 Ga0105243_10062516
142 Ga0157369_10270648
143 Ga0157372_10505416
144 Ga0157375_10105198
145 Ga0207694_10252721
146 Ga0207664_10090274
147 Ga0207644_10003464
148 Ga0207661_10364285
149 Ga0207658_10013296
150 Ga0207678_10327892
151 Ga0207708_10080513
152 Ga0207641_10009196
153 Ga0207683_10118004
154 Ga0207683_10135550
155 Ga0268264_10000943
156 Ga0307413_10030234
157 Ga0307407_10142084
158 Ga0307412_10065520
159 Ga0307409_100020834
160 Ga0307416_100009828
161 Ga0307416_100224995
162 Ga0307416_100377920
163 Ga0307414_10049396
164 Ga0307411_10044227
165 Ga0307415_100000584
166 Ga0307507_10013413
167 Ga0307507_10061394
168 Ga0307510_10099325
169 Ga0395901_0073490
170 Ga0439465_0002513
171 Ga0451793_0258702
172 Ga0451837_1393810
173 Ga0451841_0134561
174 Ga0451843_0004208
175 Ga0439431_0006364
176 Ga0466970_0009738
177 Ga0466970_0068452
178 Ga0466960_0000761
179 Ga0466960_0024231
180 Ga0466960_0062826
181 Ga0466960_0085009
182 Ga0466967_0386676
183 Ga0495665_0053884
184 Ga0495658_0151181
185 Ga0496101_0081718
186 Ga0496102_0023018
187 Ga0496102_0073980
188 Ga0496104_0043313
189 Ga0496104_0425981
190 Ga0496105_0114040
191 Ga0496106_0005157
192 Ga0496108_0022650
193 Ga0496108_0183004
194 Ga0496108_0258032
195 Ga0496109_0012982
196 Ga0496110_0013184
197 Ga0496111_0035108
198 Ga0496111_0042863
199 Ga0496113_0335969
200 Ga0496114_0065801
201 Ga0496114_0144037
202 Ga0496114_0324384
203 Ga0501034_0032244
204 Ga0501037_0001522
205 Ga0501038_0001706
206 Ga0501043_0000159
207 Ga0501043_0106071
208 Ga0501047_0029367
209 Ga0501047_0076720
210 Ga0501067_0032013
211 Ga0501068_0136140
212 Ga0501069_0040910
213 Ga0501069_0052667
214 Ga0501070_0000826
215 Ga0501070_0001567
216 Ga0501073_0031868
217 Ga0501074_0013489
218 Ga0501077_0135017
219 Ga0501044_0217265
220 nmdc:mga00v17_12524_c1
221 nmdc:mga00v17_2566_c1
222 nmdc:mga0sz30_947_c1
223 Ga0500556_0000182
224 Ga0500593_000576
225 Ga0500559_0013916
226 Ga0501082_0371255
227 Ga0530510_0245418
228 2552110370
229 2643958819
230 2644091631
231 2644099384
232 2644116422
233 2644321434
234 2644457864
235 2644538332
236 2739366174
237 2791913968
238 2795791557
239 2812350062
240 2899360195
241 2917737514
242 2974318235
243 2984526447
244 8003320446

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

60

394

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2x5d-assembly1.cif.gz_D crystal structure of a probable aminotransferase from pseudomonas aeruginosa 0.9176 18 367
3jtx-assembly1.cif.gz_A crystal structure of aminotransferase (np_283882.1) from neisseria meningitidis z2491 at 1.91 a resolution 0.9127 11 369
6l1l-assembly1.cif.gz_A apo-bacf structure from bacillus subtillis 0.9112 36 367
1gd9-assembly1.cif.gz_B crystall structure of pyrococcus protein-a1 0.9018 8 368
3b46-assembly1.cif.gz_B crystal structure of bna3p, a putative kynurenine aminotransferase from saccharomyces cerevisiae 0.9009 17 368
ID Description Score Start End Superfamily
af_O50434_40_267_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9928 48 275 3.40.640.10
af_O50434_40_267_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9885 48 275 3.40.640.10
af_Q58786_71_297_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9312 64 275 3.40.640.10
3asaA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9144 286 370 3.90.1150.10
af_Q10MQ2_363_463_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9113 278 368 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7V9EA89-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9935 13 368 GO:0009016
GO:0009058
GO:0030170
AF-A0A6I3LAZ7-F1-model_v4 Succinyldiaminopimelate transaminase (EC 2.6.1.17) 0.9901 10 370 GO:0009016
GO:0009058
GO:0030170
AF-A0A4U3MAV6-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9894 13 368 GO:0008483
GO:0009058
GO:0030170
AF-A0A370FW99-F1-model_v4 Succinyldiaminopimelate aminotransferase 0.9885 4 368 GO:0008483
GO:0009058
GO:0030170
AF-X8CRR8-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9869 51 353 GO:0008483
GO:0009058
GO:0030170

Map