F115468

General Info

Members Datasets Scaffolds Average Seq Length
122 84 121 224

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0005174|Ga0453684_0005174_3819_4580
Length 253
Sequence LSSGQISFISIYDEGDPTLCVVDKMLNPISRETKLHLIFRVIQARPRLFMSVLAGLLFVAAIPHALIQHPVTRAIAGWNFGALLYLVLAAHMIFRSTHERMRVRAGLQDEGRRVMLAMVILAALMALGGVIAQLSVVRDTQGVLKYAHIGLAAMTIITSWAFTQTMFALHYAHDYYVAVGKSLPKGLDFPGGHAPDYGDFLYFSCVIGTSGQTADVAFTSRSMRRIGTIHCVLAFFFNTTVLALTINIASGLI

Samples

Sample ID Description Type Environment
1 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
9 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
12 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
13 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
14 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
15 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
16 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
22 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
23 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
24 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
25 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
26 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
27 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
28 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
29 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
30 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
31 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
32 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
33 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
34 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
35 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
36 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
37 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
38 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
39 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
40 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
41 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
42 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
43 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
44 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
45 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
46 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
47 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
48 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
49 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
50 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
51 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
52 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
53 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
54 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
55 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
56 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
57 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
58 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
59 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
60 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
61 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
62 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
63 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
64 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
67 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
68 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
69 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
70 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
71 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
75 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
76 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
81 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
82 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
83 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
84 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.18
Metatranscriptomes 0
Isolates 0.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.92
Nodule 0
Rhizoplane 4.1
Rhizosphere 79.51
Stem 0
Stem Tuber 0
Unclassified 11.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10011901 3300003316 Bacteria 11814
2 rootH1_10050581 3300003316 Bacteria 3161
3 rootH2_10198190 3300003320 Bacteria 3065
4 rootL2_10013160 3300003322 Bacteria 21815
5 rootH1_10042677 3300003323 Bacteria 5126
6 rootH1_10099670 3300003323 Bacteria 5696
7 Ga0070671_100021278 3300005355 Bacteria 5298
8 Ga0070665_100046039 3300005548 Bacteria 4382
9 Ga0068864_100380826 3300005618 Bacteria 1337
10 Ga0068860_100539837 3300005843 Bacteria 1167
11 Ga0075365_10413103 3300006038 Bacteria 953
12 Ga0075366_10011143 3300006195 Bacteria 5068
13 Ga0105243_10031021 3300009148 Bacteria 4120
14 Ga0105248_10002855 3300009177 Bacteria 19175
15 Ga0213872_10005130 3300021361 Bacteria 6789
16 Ga0213872_10013093 3300021361 Bacteria 3888
17 Ga0209026_1013763 3300025250 Unclassified 1367
18 Ga0207644_10018420 3300025931 Bacteria 4724
19 Ga0207709_10018597 3300025935 Bacteria 3893
20 Ga0207711_10035800 3300025941 Bacteria 4209
21 Ga0207676_10291521 3300026095 Bacteria 1486
22 Ga0268266_10027491 3300028379 Bacteria 4836
23 Ga0265323_10005921 3300028653 Bacteria 5168
24 Ga0265328_10000001 3300031239 Bacteria 371500
25 Ga0265328_10008079 3300031239 Bacteria 4360
26 Ga0265328_10058942 3300031239 Bacteria 1410
27 Ga0265331_10000138 3300031250 Bacteria 96032
28 Ga0265327_10000299 3300031251 Bacteria 96033
29 Ga0265327_10000826 3300031251 Bacteria 46661
30 Ga0265327_10014350 3300031251 Bacteria 5189
31 Ga0265316_10029647 3300031344 Bacteria 4495
32 Ga0307509_10000032 3300031507 Bacteria 202919
33 Ga0307509_10106874 3300031507 Bacteria 2816
34 Ga0307509_10143237 3300031507 Bacteria 2321
35 Ga0265314_10083817 3300031711 Bacteria 2094
36 Ga0373932_0054608 3300035112 Bacteria 1196
37 Ga0373932_0096958 3300035112 Bacteria 954
38 Ga0373933_0244385 3300035724 Bacteria 1155
39 Ga0395905_0042806 3300037471 Bacteria 4248
40 Ga0395905_0286920 3300037471 Bacteria 1533
41 Ga0436361_0174346 3300039447 Bacteria 6662
42 Ga0436361_0401959 3300039447 Bacteria 5011
43 Ga0436361_0428529 3300039447 Bacteria 5123
44 Ga0436361_0549569 3300039447 Bacteria 6954
45 Ga0436361_0901820 3300039447 Bacteria 2453
46 Ga0451833_0288444 3300041491 Bacteria 1321
47 Ga0451841_0921432 3300041498 Bacteria 1154
48 Ga0451851_0417888 3300041507 Unclassified 1890
49 Ga0451853_1573296 3300041512 Bacteria 3395
50 Ga0450898_000950 3300042134 Bacteria 3639
51 Ga0451577_0006017 3300042876 Bacteria 12217
52 Ga0451577_0026655 3300042876 Bacteria 5234
53 Ga0451577_0040673 3300042876 Bacteria 4173
54 Ga0466969_0002165 3300044656 Bacteria 10493
55 Ga0466969_0043953 3300044656 Bacteria 2224
56 Ga0453683_0005858 3300044673 Bacteria 8501
57 Ga0466965_0071804 3300044683 Bacteria 1742
58 Ga0466966_0000915 3300044684 Bacteria 18773
59 Ga0466966_0040088 3300044684 Bacteria 3014
60 Ga0466961_0000071 3300044693 Bacteria 62344
61 Ga0466961_0000629 3300044693 Bacteria 22110
62 Ga0466963_0107677 3300044694 Bacteria 1911
63 Ga0453684_0003069 3300044712 Bacteria 38658
64 Ga0453684_0004752 3300044712 Bacteria 28047
65 Ga0453684_0005174 3300044712 Bacteria 26244
66 Ga0453684_0018857 3300044712 Bacteria 10555
67 Ga0453684_0079173 3300044712 Bacteria 4108
68 Ga0453684_0218302 3300044712 Bacteria 2210
69 Ga0466971_0000967 3300044719 Bacteria 11803
70 Ga0466970_0005560 3300044765 Bacteria 6264
71 Ga0466957_0068417 3300044842 Bacteria 2192
72 Ga0466960_0152248 3300044901 Bacteria 1236
73 Ga0466959_0000137 3300045049 Bacteria 47657
74 Ga0466959_0001768 3300045049 Bacteria 13474
75 Ga0451576_0001988 3300045051 Bacteria 32423
76 Ga0451576_0394945 3300045051 Unclassified 1450
77 Ga0451576_1178398 3300045051 Unclassified 800
78 Ga0466958_0045781 3300045836 Bacteria 2639
79 Ga0495603_0189043 3300046455 Bacteria 1191
80 Ga0495580_0233947 3300046472 Bacteria 1261
81 Ga0495666_0006187 3300046526 Bacteria 6023
82 Ga0495652_0221316 3300046529 Bacteria 1422
83 Ga0495665_0003444 3300046531 Bacteria 8596
84 Ga0495665_0041503 3300046531 Bacteria 2449
85 Ga0495665_0045558 3300046531 Bacteria 2329
86 Ga0495586_0002237 3300046535 Bacteria 10524
87 Ga0495586_0106759 3300046535 Bacteria 1557
88 Ga0495587_0011281 3300046536 Bacteria 5664
89 Ga0495622_0006510 3300046557 Bacteria 5417
90 Ga0495622_0014849 3300046557 Unclassified 3620
91 Ga0495625_0182718 3300046660 Unclassified 1393
92 Ga0495659_0120045 3300046664 Bacteria 1034
93 Ga0495588_0015338 3300046674 Bacteria 3686
94 Ga0495588_0030747 3300046674 Bacteria 2700
95 Ga0495588_0104300 3300046674 Bacteria 1491
96 Ga0495588_0144130 3300046674 Bacteria 1258
97 Ga0495623_0007495 3300046679 Bacteria 7084
98 Ga0495658_0249136 3300046683 Bacteria 1117
99 Ga0495658_0348673 3300046683 Bacteria 941
100 Ga0495613_0113279 3300046689 Bacteria 1953
101 Ga0495624_0013820 3300046690 Bacteria 5497
102 Ga0495581_0105083 3300047315 Bacteria 1641
103 Ga0495581_0119337 3300047315 Unclassified 1534
104 Ga0495581_0176867 3300047315 Bacteria 1247
105 Ga0495675_0010875 3300047444 Bacteria 5701
106 Ga0495593_0004437 3300047673 Bacteria 8336
107 Ga0495602_0054348 3300048088 Plasmid 3536
108 Ga0496100_0618183 3300048903 Bacteria 842
109 Ga0496108_0027442 3300048911 Bacteria 4702
110 Ga0496112_0074197 3300048915 Bacteria 3363
111 Ga0496113_0039318 3300048916 Bacteria 3481
112 Ga0496115_0100689 3300048918 Bacteria 2369
113 Ga0501033_0169253 3300049570 Bacteria 1570
114 Ga0501034_0657053 3300049571 Bacteria 950
115 Ga0501047_0465246 3300049581 Bacteria 1093
116 Ga0501035_0003439 3300049822 Bacteria 15151
117 nmdc:mga0yw44_153235_c1 3300050492 Bacteria 1504
118 nmdc:mga0k408_9810_c2 3300050493 Bacteria 4139
119 Ga0500572_144125 3300053111 Bacteria 777
120 Ga0500607_009385 3300053121 Bacteria 5889
121 Ga0466962_0002303 3300061719 Bacteria 9051

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053111 Ga0500572_144125 Ga0500572_144125_65_730 204
2 3300021361 Ga0213872_10005130 Ga0213872_100051305 205
3 3300039447 Ga0436361_0549569 Ga0436361_0549569_5861_6553 205
4 3300044712 Ga0453684_0003069 Ga0453684_0003069_12503_13189 206
5 3300045049 Ga0466959_0001768 Ga0466959_0001768_3762_4457 206
6 3300046674 Ga0495588_0030747 Ga0495588_0030747_927_1613 206
7 3300046674 Ga0495588_0104300 Ga0495588_0104300_11_631 206
8 3300050492 nmdc:mga0yw44_153235_c1 nmdc:mga0yw44_153235_c1_729_1382 206
9 3300003322 rootL2_10013160 rootL2_100131604 208
10 3300031507 Ga0307509_10106874 Ga0307509_101068744 208
11 3300044656 Ga0466969_0002165 Ga0466969_0002165_7609_8310 208
12 3300044683 Ga0466965_0071804 Ga0466965_0071804_765_1466 208
13 3300044684 Ga0466966_0040088 Ga0466966_0040088_1753_2454 208
14 3300044693 Ga0466961_0000071 Ga0466961_0000071_51862_52563 208
15 3300039447 Ga0436361_0401959 Ga0436361_0401959_2906_3598 209
16 3300039447 Ga0436361_0428529 Ga0436361_0428529_1601_2293 209
17 3300041491 Ga0451833_0288444 Ga0451833_0288444_327_998 210
18 3300041498 Ga0451841_0921432 Ga0451841_0921432_147_818 210
19 3300041512 Ga0451853_1573296 Ga0451853_1573296_1326_1997 210
20 3300046674 Ga0495588_0015338 Ga0495588_0015338_1792_2478 211
21 3300037471 Ga0395905_0042806 Ga0395905_0042806_323_1009 213
22 3300037471 Ga0395905_0286920 Ga0395905_0286920_778_1464 213
23 3300039447 Ga0436361_0901820 Ga0436361_0901820_1631_2323 213
24 3300042134 Ga0450898_000950 Ga0450898_000950_1928_2617 213
25 3300053121 Ga0500607_009385 Ga0500607_009385_30_728 214
26 3300006038 Ga0075365_10413103 Ga0075365_104131032 215
27 3300035112 Ga0373932_0096958 Ga0373932_0096958_18_680 215
28 3300005843 Ga0068860_100539837 Ga0068860_1005398372 216
29 3300031344 Ga0265316_10029647 Ga0265316_100296473 216
30 3300035724 Ga0373933_0244385 Ga0373933_0244385_64_729 216
31 3300046660 Ga0495625_0182718 Ga0495625_0182718_547_1233 217
32 3300003320 rootH2_10198190 rootH2_101981903 219
33 3300021361 Ga0213872_10013093 Ga0213872_100130932 220
34 3300039447 Ga0436361_0174346 Ga0436361_0174346_3145_3840 220
35 3300042876 Ga0451577_0040673 Ga0451577_0040673_2562_3308 220
36 3300003316 rootH1_10050581 rootH1_100505812 223
37 3300003323 rootH1_10042677 rootH1_100426772 223
38 3300005355 Ga0070671_100021278 Ga0070671_1000212784 223
39 3300005618 Ga0068864_100380826 Ga0068864_1003808262 223
40 3300009148 Ga0105243_10031021 Ga0105243_100310214 223
41 3300025931 Ga0207644_10018420 Ga0207644_100184202 223
42 3300025935 Ga0207709_10018597 Ga0207709_100185973 223
43 3300025941 Ga0207711_10035800 Ga0207711_100358003 223
44 3300026095 Ga0207676_10291521 Ga0207676_102915212 223
45 3300031507 Ga0307509_10143237 Ga0307509_101432373 223
46 3300041507 Ga0451851_0417888 Ga0451851_0417888_828_1499 223
47 3300044712 Ga0453684_0004752 Ga0453684_0004752_460_1131 223
48 3300044901 Ga0466960_0152248 Ga0466960_0152248_540_1211 223
49 3300049571 Ga0501034_0657053 Ga0501034_0657053_239_910 223
50 3300031239 Ga0265328_10008079 Ga0265328_100080795 224
51 3300031239 Ga0265328_10058942 Ga0265328_100589422 224
52 3300031250 Ga0265331_10000138 Ga0265331_1000013848 224
53 3300031251 Ga0265327_10000299 Ga0265327_1000029946 224
54 3300031251 Ga0265327_10014350 Ga0265327_100143505 224
55 3300046683 Ga0495658_0249136 Ga0495658_0249136_421_1095 224
56 iso_pu_bacteria 2843690924 2843691822 224
57 3300003323 rootH1_10099670 rootH1_100996704 227
58 3300005548 Ga0070665_100046039 Ga0070665_1000460393 227
59 3300006195 Ga0075366_10011143 Ga0075366_100111432 227
60 3300028379 Ga0268266_10027491 Ga0268266_100274914 227
61 3300044656 Ga0466969_0043953 Ga0466969_0043953_518_1204 227
62 3300044684 Ga0466966_0000915 Ga0466966_0000915_11095_11781 227
63 3300044693 Ga0466961_0000629 Ga0466961_0000629_13454_14140 227
64 3300044694 Ga0466963_0107677 Ga0466963_0107677_766_1452 227
65 3300044719 Ga0466971_0000967 Ga0466971_0000967_795_1481 227
66 3300044765 Ga0466970_0005560 Ga0466970_0005560_3145_3831 227
67 3300044842 Ga0466957_0068417 Ga0466957_0068417_364_1050 227
68 3300045049 Ga0466959_0000137 Ga0466959_0000137_33362_34048 227
69 3300045836 Ga0466958_0045781 Ga0466958_0045781_796_1482 227
70 3300049581 Ga0501047_0465246 Ga0501047_0465246_285_980 227
71 3300049822 Ga0501035_0003439 Ga0501035_0003439_14292_14987 227
72 3300050493 nmdc:mga0k408_9810_c2 nmdc:mga0k408_9810_c2_2734_3417 227
73 3300061719 Ga0466962_0002303 Ga0466962_0002303_7848_8534 227
74 3300031239 Ga0265328_10000001 Ga0265328_10000001163 228
75 3300031507 Ga0307509_10000032 Ga0307509_10000032162 228
76 3300031711 Ga0265314_10083817 Ga0265314_100838172 228
77 3300035112 Ga0373932_0054608 Ga0373932_0054608_23_709 228
78 3300045051 Ga0451576_0394945 Ga0451576_0394945_305_991 228
79 3300046455 Ga0495603_0189043 Ga0495603_0189043_391_1077 228
80 3300046472 Ga0495580_0233947 Ga0495580_0233947_52_738 228
81 3300046526 Ga0495666_0006187 Ga0495666_0006187_4137_4823 228
82 3300046529 Ga0495652_0221316 Ga0495652_0221316_558_1244 228
83 3300046531 Ga0495665_0003444 Ga0495665_0003444_6726_7412 228
84 3300046531 Ga0495665_0041503 Ga0495665_0041503_464_1150 228
85 3300046531 Ga0495665_0045558 Ga0495665_0045558_660_1346 228
86 3300046535 Ga0495586_0002237 Ga0495586_0002237_9273_9959 228
87 3300046535 Ga0495586_0106759 Ga0495586_0106759_408_1094 228
88 3300046536 Ga0495587_0011281 Ga0495587_0011281_1434_2120 228
89 3300046557 Ga0495622_0006510 Ga0495622_0006510_530_1216 228
90 3300046557 Ga0495622_0014849 Ga0495622_0014849_176_862 228
91 3300046664 Ga0495659_0120045 Ga0495659_0120045_268_954 228
92 3300046674 Ga0495588_0144130 Ga0495588_0144130_105_791 228
93 3300046679 Ga0495623_0007495 Ga0495623_0007495_6181_6867 228
94 3300046689 Ga0495613_0113279 Ga0495613_0113279_271_957 228
95 3300046690 Ga0495624_0013820 Ga0495624_0013820_3886_4572 228
96 3300047315 Ga0495581_0105083 Ga0495581_0105083_492_1178 228
97 3300047315 Ga0495581_0119337 Ga0495581_0119337_832_1518 228
98 3300047315 Ga0495581_0176867 Ga0495581_0176867_389_1075 228
99 3300047444 Ga0495675_0010875 Ga0495675_0010875_4798_5484 228
100 3300047673 Ga0495593_0004437 Ga0495593_0004437_7554_8240 228
101 3300048088 Ga0495602_0054348 Ga0495602_0054348_2346_3032 228
102 3300048918 Ga0496115_0100689 Ga0496115_0100689_565_1251 228
103 3300009177 Ga0105248_10002855 Ga0105248_1000285511 229
104 3300025250 Ga0209026_1013763 Ga0209026_10137632 229
105 3300028653 Ga0265323_10005921 Ga0265323_100059215 229
106 3300031251 Ga0265327_10000826 Ga0265327_1000082615 229
107 3300042876 Ga0451577_0006017 Ga0451577_0006017_1832_2524 229
108 3300042876 Ga0451577_0026655 Ga0451577_0026655_2155_2847 229
109 3300044673 Ga0453683_0005858 Ga0453683_0005858_2527_3219 229
110 3300044712 Ga0453684_0018857 Ga0453684_0018857_4655_5347 229
111 3300044712 Ga0453684_0079173 Ga0453684_0079173_213_905 229
112 3300044712 Ga0453684_0218302 Ga0453684_0218302_68_760 229
113 3300045051 Ga0451576_0001988 Ga0451576_0001988_4396_5088 229
114 3300045051 Ga0451576_1178398 Ga0451576_1178398_57_749 229
115 3300046683 Ga0495658_0348673 Ga0495658_0348673_154_861 229
116 3300048903 Ga0496100_0618183 Ga0496100_0618183_47_766 229
117 3300048911 Ga0496108_0027442 Ga0496108_0027442_659_1378 229
118 3300048915 Ga0496112_0074197 Ga0496112_0074197_814_1533 229
119 3300048916 Ga0496113_0039318 Ga0496113_0039318_821_1540 229
120 3300044712 Ga0453684_0005174 Ga0453684_0005174_3819_4580 230
121 3300003316 rootH1_10011901 rootH1_1001190112 231
122 3300049570 Ga0501033_0169253 Ga0501033_0169253_609_1322 231

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07077

DUF1345

Protein of unknown function (DUF1345)

70

244

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4h33-assembly1.cif.gz_A crystal structure of a voltage-gated k+ channel pore module in a closed state in lipid membranes, tetragonal crystal form 0.8606 172 226
4h37-assembly1.cif.gz_A crystal structure of a voltage-gated k+ channel pore domain in a closed state in lipid membranes 0.8546 172 226
3f7y-assembly1.cif.gz_C kcsa potassium channel in the partially open state with 17 a opening at t112 0.7921 168 225
5vk6-assembly1.cif.gz_C open conformation of kcsa non-inactivating e71a mutant 0.7735 168 229
2ih3-assembly1.cif.gz_C ion selectivity in a semi-synthetic k+ channel locked in the conductive conformation 0.7253 168 229
ID Description Score Start End Superfamily
4h33A00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8606 172 226 1.10.287.70
4h37A00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8546 172 226 1.10.287.70
4h37B00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8312 172 229 1.10.287.70
2wllA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.6992 119 225 1.10.287.70
af_O53346_37_141_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.68 91 226 1.10.287.70
ID Description Score Start End GO Terms
AF-A0A315ASV8-F1-model_v4 DUF1345 domain-containing protein 0.9808 90 231 GO:0016020
AF-A0A2R5FA31-F1-model_v4 DUF1345 domain-containing protein 0.9763 49 231 GO:0016020
AF-G7GD14-F1-model_v4 DUF1345 domain-containing protein 0.9682 53 230 GO:0016020
AF-A0A0J1C690-F1-model_v4 DUF1345 domain-containing protein 0.9673 16 230 GO:0016020
AF-A0A2T5XCK2-F1-model_v4 deleted 0.9631 15 230

Feature Viewer

pLDDT pTM Quality
84.85 0.82 High
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Predicted Structure (AlphaFold2)

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